AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1265280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1265280 MtrunA17_Chr4g0072691 94.050 605 8 1 31 607 2 606 0.0 1158
Msa1265280 MtrunA17_Chr2g0281171 63.091 634 179 9 13 607 16 633 0.0 787
Msa1265280 MtrunA17_Chr4g0048161 62.758 631 182 8 13 607 15 628 0.0 784
Msa1265280 MtrunA17_Chr2g0304831 56.197 589 223 12 28 606 30 593 0.0 623
Msa1265280 MtrunA17_Chr6g0484131 47.301 389 186 8 13 387 4 387 2.02e-117 358
Msa1265280 MtrunA17_Chr6g0484121 47.815 389 184 8 13 387 4 387 1.66e-115 353
Msa1265280 MtrunA17_Chr6g0484111 41.379 493 257 11 13 488 4 481 6.21e-115 352
Msa1265280 MtrunA17_Chr8g0391221 48.670 376 179 7 21 386 13 384 3.27e-113 347
Msa1265280 MtrunA17_Chr8g0391211 46.907 388 187 8 12 386 74 455 2.86e-110 342
Msa1265280 MtrunA17_Chr4g0059411 40.764 471 250 8 15 461 2 467 1.60e-103 324
Msa1265280 MtrunA17_Chr7g0271691 37.464 347 189 11 42 376 31 361 7.51e-61 211
Msa1265280 MtrunA17_Chr7g0271671 32.432 333 212 8 52 378 60 385 1.28e-42 161
Msa1265280 MtrunA17_Chr7g0271681 34.021 291 182 6 91 376 8 293 7.17e-41 155
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1265280 AT5G57580.1 66.294 626 175 7 12 602 12 636 0.0 824
Msa1265280 AT2G18750.3 65.604 596 186 6 25 607 30 619 0.0 783
Msa1265280 AT2G18750.2 65.604 596 186 6 25 607 30 619 0.0 783
Msa1265280 AT2G18750.1 65.604 596 186 6 25 607 30 619 0.0 783
Msa1265280 AT4G25800.1 64.167 600 186 10 21 605 9 594 0.0 748
Msa1265280 AT4G25800.2 64.167 600 186 10 21 605 9 594 0.0 748
Msa1265280 AT2G24300.3 53.686 624 240 14 9 606 3 603 0.0 600
Msa1265280 AT2G24300.2 53.698 622 239 14 11 606 1 599 0.0 599
Msa1265280 AT2G24300.1 52.817 568 224 12 60 606 8 552 0.0 540
Msa1265280 AT4G31000.1 63.807 373 127 3 22 390 18 386 1.80e-171 499
Msa1265280 AT4G31000.1 48.039 102 50 2 507 606 462 562 2.55e-18 89.0
Msa1265280 AT4G31000.2 54.692 373 140 4 22 390 18 365 1.79e-137 412
Msa1265280 AT4G31000.2 48.039 102 50 2 507 606 441 541 2.87e-18 89.0
Msa1265280 AT5G62570.1 45.119 379 193 7 12 386 10 377 1.14e-106 331
Msa1265280 AT5G62570.4 45.879 364 182 7 12 371 10 362 5.08e-105 322
Msa1265280 AT5G62570.2 45.658 357 183 6 34 386 13 362 2.43e-103 322
Msa1265280 AT1G73805.1 45.346 419 202 14 12 417 3 407 2.11e-99 310
Msa1265280 AT5G62570.3 46.897 290 140 6 12 298 10 288 6.03e-82 259
Msa1265280 AT5G26920.3 38.187 364 207 8 35 395 28 376 7.37e-74 243
Msa1265280 AT5G26920.1 36.124 418 240 10 35 444 28 426 3.55e-73 245
Msa1265280 AT5G26920.2 35.646 418 234 11 35 444 28 418 3.82e-69 234

Find 214 sgRNAs with CRISPR-Local

Find 456 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGGCTTCCTTAGCAGTTTC+TGG 0.190436 8_2:+69474710 Msa1265280:three_prime_UTR
GAAACTTGCGGCTTCAATTT+AGG 0.227554 8_2:+69471585 Msa1265280:CDS
GACCAATCATCAAAAGGATT+TGG 0.249013 8_2:-69473948 None:intergenic
TCATTCCAAGCCTGAATTTA+CGG 0.256176 8_2:-69471937 None:intergenic
CTGTCTAACGACCATTTATT+AGG 0.257471 8_2:+69473804 Msa1265280:CDS
CCAACATTTCTTGTATCTTC+TGG 0.260798 8_2:-69472472 None:intergenic
CGTAGATTCATTGGTGAAAA+AGG 0.263119 8_2:+69472847 Msa1265280:CDS
AAGGACGACAAAATCGATTA+TGG 0.266160 8_2:-69468469 None:intergenic
ACCAATCATCAAAAGGATTT+GGG 0.270429 8_2:-69473947 None:intergenic
ATTCCAGGTCTTCCCCTAAA+AGG 0.273733 8_2:+69471543 Msa1265280:intron
TTAGACTCCCCGTCACTTTC+CGG 0.276467 8_2:+69468573 Msa1265280:five_prime_UTR
GGCTCCAATTCATGTTGTTC+TGG 0.279294 8_2:+69471661 Msa1265280:CDS
ACCTACCGACGGAGCAAGTA+TGG 0.282294 8_2:+69469009 Msa1265280:CDS
CCTTCTCAATCATCAACTTC+AGG 0.283311 8_2:+69473888 Msa1265280:CDS
TATCACCTTTCCATTTGTTC+TGG 0.286857 8_2:+69474535 Msa1265280:three_prime_UTR
CTCGATGTCGTTGTCCTTGA+AGG 0.310403 8_2:+69471737 Msa1265280:CDS
AGTTAGATGAATAGGTTGTT+TGG 0.310778 8_2:+69474279 Msa1265280:exon
ATGATCATTTCTAGAGCTTT+GGG 0.311058 8_2:-69473841 None:intergenic
TCAACATTGATAAAACTCTT+AGG 0.314107 8_2:+69468293 None:intergenic
AGGAGGGAGTTGGAACATTA+GGG 0.319027 8_2:+69471876 Msa1265280:CDS
GTCCATGGTATCAACATTCT+TGG 0.320854 8_2:+69474393 Msa1265280:three_prime_UTR
TATGATCATTTCTAGAGCTT+TGG 0.327299 8_2:-69473842 None:intergenic
ATGAAGGTTGCATCTGGTTT+TGG 0.327841 8_2:+69471956 Msa1265280:CDS
GATAGAGGAGTTAGATGAAT+AGG 0.330153 8_2:+69474271 Msa1265280:CDS
GACCTTCCACTAAGTCTTGC+AGG 0.335446 8_2:-69470560 None:intergenic
AAGGAGGGAGTTGGAACATT+AGG 0.344356 8_2:+69471875 Msa1265280:CDS
AGGAAAAGTGGAAGGCGAGC+AGG 0.346252 8_2:+69471637 Msa1265280:CDS
CTTTCTTCGACTTGTGGTTA+AGG 0.348617 8_2:+69472261 Msa1265280:CDS
AGAATTGCTCTCCTGTTATA+AGG 0.349484 8_2:-69472528 None:intergenic
GTTTCTCTTTGTATTATTTG+TGG 0.350430 8_2:-69468410 None:intergenic
GTTAGATGAATAGGTTGTTT+GGG 0.361733 8_2:+69474280 Msa1265280:exon
CATTGTTAAAATCGCCTTCA+AGG 0.369195 8_2:-69471751 None:intergenic
TCAACCAGAACAACATGAAT+TGG 0.380406 8_2:-69471665 None:intergenic
TTGATGATTGGTCAAACAAC+AGG 0.382766 8_2:+69473958 Msa1265280:CDS
TATCCAAGCCAGGCCTTGAT+TGG 0.383278 8_2:+69473741 Msa1265280:CDS
AAAGATAACTTAGCAGTGTT+TGG 0.386742 8_2:-69468531 None:intergenic
ATACCATGGACTGCACAATT+TGG 0.386826 8_2:-69474381 None:intergenic
AAAAGGGCCCTTGAGGGTGG+TGG 0.392097 8_2:+69469034 Msa1265280:CDS
GGTGAGCATTGCCTAATAAA+TGG 0.392285 8_2:-69473815 None:intergenic
TGATAGAGGAGAGTATTAAC+AGG 0.393310 8_2:-69474517 None:intergenic
GAGCTGCGTGGCCTTATAAC+AGG 0.396907 8_2:+69472517 Msa1265280:CDS
GAAAGAGACCTTTGTTGAAC+GGG 0.397608 8_2:+69471834 Msa1265280:CDS
CTTGGAATGAAGGTTGCATC+TGG 0.399676 8_2:+69471950 Msa1265280:CDS
ATAACCATCCTCAGTATTCA+TGG 0.401476 8_2:-69474099 None:intergenic
TTGTTTGGGCAAATGATAGT+AGG 0.407310 8_2:+69474294 Msa1265280:three_prime_UTR
GTATGGAGATTGGAGAAAAT+AGG 0.411051 8_2:+69472181 Msa1265280:CDS
CATGGCTTTCAAATTCCTCT+TGG 0.412910 8_2:-69471793 None:intergenic
ACAATGAAGATGATGAAGAT+TGG 0.416706 8_2:+69471768 Msa1265280:CDS
TCAACAAAGGTCTCTTTCCT+TGG 0.417676 8_2:-69471829 None:intergenic
AGAGCAGGCCTCTTTCGTTC+AGG 0.419912 8_2:-69469070 None:intergenic
TTCAATAAGCAAGAAATTTG+AGG 0.423231 8_2:-69468695 None:intergenic
GCAGTGTTTGGTGCAGTGTT+TGG 0.423772 8_2:-69468519 None:intergenic
TCGTCCTGGCAAAGCTGTTG+TGG 0.427546 8_2:+69474175 Msa1265280:CDS
ATCAAAATGACTCCGAGAGC+TGG 0.427633 8_2:-69473769 None:intergenic
TTAGGTCCTGCAAGACTTAG+TGG 0.427991 8_2:+69470554 Msa1265280:CDS
CTTACAACTCTACGAAGAAT+AGG 0.430379 8_2:-69469971 None:intergenic
GAGCGTGCTTTGGCGAAGTT+AGG 0.431759 8_2:+69470536 Msa1265280:CDS
ACGGAGCAAGTATGGGGAAA+AGG 0.432238 8_2:+69469017 Msa1265280:CDS
GGAAAAGTGGAAGGCGAGCA+GGG 0.434212 8_2:+69471638 Msa1265280:CDS
AATGGATTATTTGCCTGAGT+TGG 0.436962 8_2:-69468444 None:intergenic
TAAATTCAGGCTTGGAATGA+AGG 0.442836 8_2:+69471940 Msa1265280:CDS
GGATAAGAAGCCGTAAATTC+AGG 0.444391 8_2:+69471927 Msa1265280:CDS
TTTCCAATCAAGGCCTGGCT+TGG 0.454955 8_2:-69473744 None:intergenic
GTATTATTTGTGGTCTACTC+TGG 0.457881 8_2:-69468400 None:intergenic
CTTGGCGTTCTTTCACCACA+TGG 0.459760 8_2:-69471811 None:intergenic
AGGACGACAAAATCGATTAT+GGG 0.463927 8_2:-69468468 None:intergenic
TTGTTTGACCAATCATCAAA+AGG 0.464007 8_2:-69473954 None:intergenic
ACAAAATCGATTATGGGTAA+TGG 0.465384 8_2:-69468462 None:intergenic
TGGAATTTCCAATCAAGGCC+TGG 0.466762 8_2:-69473749 None:intergenic
GGGAAAAGGGCCCTTGAGGG+TGG 0.466874 8_2:+69469031 Msa1265280:CDS
CTGCATTGGGTGATGATGTA+TGG 0.466882 8_2:+69472164 Msa1265280:CDS
GATGACCTCCCATGCTGAAA+AGG 0.468471 8_2:-69474073 None:intergenic
TTGGAGAAAATAGGTAAGGA+TGG 0.469150 8_2:+69472190 Msa1265280:CDS
CGTCCTGGCAAAGCTGTTGT+GGG 0.470319 8_2:+69474176 Msa1265280:CDS
AAGCATTATCCTCCTGCATT+GGG 0.471644 8_2:+69472151 Msa1265280:CDS
CGGAGCAAGTATGGGGAAAA+GGG 0.472146 8_2:+69469018 Msa1265280:CDS
GAAAAGTGGAAGGCGAGCAG+GGG 0.473276 8_2:+69471639 Msa1265280:CDS
ACTGCTAAGTTATCTTTCTC+AGG 0.476266 8_2:+69468537 Msa1265280:five_prime_UTR
TGCTAAGGAAGCCGATGTAC+TGG 0.478188 8_2:-69474702 None:intergenic
ATGGGGAAAAGGGCCCTTGA+GGG 0.479275 8_2:+69469028 Msa1265280:CDS
TGAGAAGCGGGCTCAGATAG+AGG 0.479668 8_2:+69474256 Msa1265280:CDS
AGTGAAGTATTGAAGAGTAA+AGG 0.481642 8_2:-69468611 None:intergenic
AGCCGCAAGTTTCTACCATC+AGG 0.481921 8_2:-69471575 None:intergenic
TGAAGAAGTGGAGCGTGCTT+TGG 0.482538 8_2:+69470526 Msa1265280:CDS
AACAGTAAAAGCCACTGTCT+TGG 0.483889 8_2:-69472002 None:intergenic
AACAAATGGAAAGGTGATAG+AGG 0.484106 8_2:-69474531 None:intergenic
CCAGGTGTACGTAGATTCAT+TGG 0.488667 8_2:+69472838 Msa1265280:intron
CATTTCTAGAGCTTTGGGAT+TGG 0.490729 8_2:-69473836 None:intergenic
TCTTCCCCTAAAAGGATTGA+AGG 0.490929 8_2:+69471551 Msa1265280:CDS
GAAGCATTATCCTCCTGCAT+TGG 0.492254 8_2:+69472150 Msa1265280:CDS
AGTGGAAGTGTGGTAACATC+TGG 0.494354 8_2:+69471695 Msa1265280:CDS
ACAGAAAGCCGGAAAGTGAC+GGG 0.497033 8_2:-69468581 None:intergenic
ATAGGAGATGGCATGAATGA+TGG 0.499594 8_2:-69474128 None:intergenic
AGAGAAGAGAGAGAGAAAGA+AGG 0.501469 8_2:-69468488 None:intergenic
AGCACAGTAGGGTTGGCTCT+TGG 0.502333 8_2:+69473864 Msa1265280:CDS
TGTTACCACACTTCCACTGT+TGG 0.502440 8_2:-69471690 None:intergenic
TCTCAAATCTGACAGGTGTT+CGG 0.504630 8_2:-69474580 None:intergenic
AAAGATAGCAGCTGAGAAGC+GGG 0.505005 8_2:+69474244 Msa1265280:CDS
ATTTGGGGCAGGTGGTTGCA+TGG 0.506195 8_2:-69473931 None:intergenic
GAGCGATCCTCATCGAAGTT+CGG 0.507680 8_2:-69474152 None:intergenic
TGAAGACTTTCTTCGACTTG+TGG 0.512373 8_2:+69472255 Msa1265280:CDS
CAAAGACATGTGTTCTAAGC+GGG 0.515939 8_2:+69472431 Msa1265280:CDS
GATGAGGATCGCTCTCGTCC+TGG 0.516093 8_2:+69474161 Msa1265280:CDS
GGGTGATGATGTATGGAGAT+TGG 0.516199 8_2:+69472171 Msa1265280:CDS
CATGGACTGCACAATTTGGT+TGG 0.518331 8_2:-69474377 None:intergenic
CATCCCACAACAGCTTTGCC+AGG 0.518586 8_2:-69474179 None:intergenic
CCAGAAGATACAAGAAATGT+TGG 0.524917 8_2:+69472472 Msa1265280:CDS
GAATAGAGGAAGAGCCAGTC+GGG 0.527053 8_2:-69471609 None:intergenic
AGAAGCCGTAAATTCAGGCT+TGG 0.527674 8_2:+69471932 Msa1265280:CDS
CCCATACTTGCTCCGTCGGT+AGG 0.528831 8_2:-69469010 None:intergenic
ATGATCAGCCTGAACGAAAG+AGG 0.530138 8_2:+69469062 Msa1265280:CDS
TCTATTCACAGGAGGAAAAG+TGG 0.530836 8_2:+69471625 Msa1265280:CDS
AGAAATGATCATAGCACAGT+AGG 0.531016 8_2:+69473852 Msa1265280:CDS
CCTACCGACGGAGCAAGTAT+GGG 0.532278 8_2:+69469010 Msa1265280:CDS
AGAGCTGGAATTTCCAATCA+AGG 0.532492 8_2:-69473754 None:intergenic
TAGGAGATGGCATGAATGAT+GGG 0.538746 8_2:-69474127 None:intergenic
TGATTGGAAATTCCAGCTCT+CGG 0.541752 8_2:+69473757 Msa1265280:CDS
TGATCATAGCACAGTAGGGT+TGG 0.542419 8_2:+69473857 Msa1265280:CDS
GAGATTGGAGAAAATAGGTA+AGG 0.543540 8_2:+69472186 Msa1265280:CDS
GGCATACGACAATTGGGAGC+AGG 0.543575 8_2:+69472868 Msa1265280:CDS
CAACCAAATTGTGCAGTCCA+TGG 0.548998 8_2:+69474378 Msa1265280:three_prime_UTR
TTTACTGTTAAAGATCATAG+AGG 0.549297 8_2:+69472016 Msa1265280:CDS
GTGACACTCAAGGAGGGAGT+TGG 0.551007 8_2:+69471866 Msa1265280:CDS
GAAAGAGGCCTGCTCTTGCT+AGG 0.551299 8_2:+69469077 Msa1265280:CDS
GCGGTATGTCAAACAAGATG+TGG 0.556486 8_2:+69472389 Msa1265280:CDS
AACAGAAAGCCGGAAAGTGA+CGG 0.556818 8_2:-69468582 None:intergenic
TCGAAGTTCGGCATAGGAGA+TGG 0.557623 8_2:-69474140 None:intergenic
GCTTCAATTTAGGTCCCGAC+TGG 0.559550 8_2:+69471595 Msa1265280:CDS
TCATCAAAAGGATTTGGGGC+AGG 0.561538 8_2:-69473942 None:intergenic
CTGGCAAAGCTGTTGTGGGA+TGG 0.561875 8_2:+69474180 Msa1265280:CDS
GGAAAGAGACCTTTGTTGAA+CGG 0.564757 8_2:+69471833 Msa1265280:CDS
GAAACAGGTGAGTGAAGAAG+TGG 0.565250 8_2:+69470514 Msa1265280:intron
TGCAGTTCCCCGTTCAACAA+AGG 0.567230 8_2:-69471842 None:intergenic
CATCATCTCCACCACCCTCA+AGG 0.569454 8_2:-69469042 None:intergenic
TGCTGTAAAATCAGATACAC+AGG 0.570797 8_2:-69474422 None:intergenic
CTGGCTCTTCCTCTATTCAC+AGG 0.571268 8_2:+69471614 Msa1265280:CDS
CATACATCATCACCCAATGC+AGG 0.571328 8_2:-69472163 None:intergenic
TTCTCTTAGCGATAATCAGA+AGG 0.571541 8_2:+69472561 Msa1265280:CDS
AGTTATATCTCAAATCTGAC+AGG 0.574283 8_2:-69474587 None:intergenic
GAAAGATAGCAGCTGAGAAG+CGG 0.574867 8_2:+69474243 Msa1265280:CDS
GGTGACGAGGTATCCAAGCC+AGG 0.574995 8_2:+69473731 Msa1265280:CDS
AATTAGTACCTAGCAAGAGC+AGG 0.575775 8_2:-69469085 None:intergenic
TGTAATTGTTGAAGCTCTCA+AGG 0.576695 8_2:+69469913 Msa1265280:CDS
TTTCCCCATACTTGCTCCGT+CGG 0.576968 8_2:-69469014 None:intergenic
TGTTTGACATACCGCTCCCA+AGG 0.580423 8_2:-69472381 None:intergenic
CCTTCCATGAATACTGAGGA+TGG 0.581352 8_2:+69474095 Msa1265280:CDS
AGATCAAGGCAGCAATGAGG+TGG 0.581898 8_2:+69474207 Msa1265280:CDS
TGGAGAAAATAGGTAAGGAT+GGG 0.582851 8_2:+69472191 Msa1265280:CDS
AAAAGTGGAAGGCGAGCAGG+GGG 0.583445 8_2:+69471640 Msa1265280:CDS
ATACTTGCTCCGTCGGTAGG+TGG 0.585208 8_2:-69469007 None:intergenic
TCAAAAGGATTTGGGGCAGG+TGG 0.585247 8_2:-69473939 None:intergenic
GATCAAGGCAGCAATGAGGT+GGG 0.585308 8_2:+69474208 Msa1265280:CDS
TTAGAACACATGTCTTTGCA+TGG 0.587365 8_2:-69472426 None:intergenic
GTAAAAGAAACGAAGTGTAA+CGG 0.588321 8_2:-69468661 None:intergenic
GAAATGATCATAGCACAGTA+GGG 0.588957 8_2:+69473853 Msa1265280:CDS
GTGGAGTCAATTGATTATGA+TGG 0.589511 8_2:+69472968 Msa1265280:CDS
GAAAGTGACGGGGAGTCTAA+CGG 0.591064 8_2:-69468570 None:intergenic
AAAAGGATTGAAGGTCCTGA+TGG 0.591187 8_2:+69471560 Msa1265280:CDS
TATTTACAGACAATTCAAGC+TGG 0.591421 8_2:+69471906 Msa1265280:CDS
TCCTCATCGAAGTTCGGCAT+AGG 0.592002 8_2:-69474146 None:intergenic
ATCTGAAAATGAACTTCATG+TGG 0.593527 8_2:+69472949 Msa1265280:CDS
TGAATAGAGGAAGAGCCAGT+CGG 0.595918 8_2:-69471610 None:intergenic
TTGGTCAAACAACAGGGACA+AGG 0.596217 8_2:+69473965 Msa1265280:CDS
TATGGGGAAAAGGGCCCTTG+AGG 0.596359 8_2:+69469027 Msa1265280:CDS
TGTGGGATGGCTGAAGATCA+AGG 0.598934 8_2:+69474193 Msa1265280:CDS
AACCAAGAATGTTGATACCA+TGG 0.601047 8_2:-69474395 None:intergenic
TGTGGATTGCACCAGTACAT+CGG 0.602479 8_2:+69474691 Msa1265280:three_prime_UTR
CCTGAAGTTGATGATTGAGA+AGG 0.602603 8_2:-69473888 None:intergenic
ATCATCTCCACCACCCTCAA+GGG 0.602604 8_2:-69469041 None:intergenic
GCAAAGACATGTGTTCTAAG+CGG 0.603417 8_2:+69472430 Msa1265280:CDS
CCAATCATCAAAAGGATTTG+GGG 0.604126 8_2:-69473946 None:intergenic
ACTCAATGACTTTCCAACTC+AGG 0.604793 8_2:+69468431 Msa1265280:five_prime_UTR
GTACGATGGCAAATCACTTG+TGG 0.605703 8_2:+69472898 Msa1265280:CDS
CCATCCTCAGTATTCATGGA+AGG 0.606998 8_2:-69474095 None:intergenic
CGGTATGTCAAACAAGATGT+GGG 0.611205 8_2:+69472390 Msa1265280:CDS
ATCAAGGCAGCAATGAGGTG+GGG 0.619987 8_2:+69474209 Msa1265280:CDS
TCGTTAACCAGAAACTGCTA+AGG 0.620384 8_2:-69474717 None:intergenic
CGAAGTGTAACGGAGTGAGA+CGG 0.622734 8_2:-69468651 None:intergenic
TTAAGGATCAACAGAAATTG+CGG 0.629713 8_2:+69472278 Msa1265280:CDS
TTCACAGGAGGAAAAGTGGA+AGG 0.630540 8_2:+69471629 Msa1265280:CDS
TAAAACCAGAACAAATGGAA+AGG 0.632256 8_2:-69474540 None:intergenic
GAGTCAATTGATTATGATGG+CGG 0.635927 8_2:+69472971 Msa1265280:CDS
TGATGATTGGTCAAACAACA+GGG 0.639296 8_2:+69473959 Msa1265280:CDS
CTACCGACGGAGCAAGTATG+GGG 0.641969 8_2:+69469011 Msa1265280:CDS
GGAGGGAGTTGGAACATTAG+GGG 0.645782 8_2:+69471877 Msa1265280:CDS
GTCCTGCAAGACTTAGTGGA+AGG 0.645964 8_2:+69470558 Msa1265280:CDS
TTAATGTAGATCCTTGGGAG+CGG 0.650892 8_2:+69472370 Msa1265280:intron
TGGTCAAACAACAGGGACAA+GGG 0.651328 8_2:+69473966 Msa1265280:CDS
CTGCAAGTGACACTCAAGGA+GGG 0.652548 8_2:+69471860 Msa1265280:CDS
AAGTCGAAGAAAGTCTTCAA+CGG 0.655298 8_2:-69472251 None:intergenic
ACATCATCACCCAATGCAGG+AGG 0.659507 8_2:-69472160 None:intergenic
TGATGAAGATTGGAGCCAAG+AGG 0.663673 8_2:+69471778 Msa1265280:CDS
GTCCTGATGGTAGAAACTTG+CGG 0.666102 8_2:+69471573 Msa1265280:CDS
TCCTATGCCGAACTTCGATG+AGG 0.673170 8_2:+69474145 Msa1265280:CDS
GTATCTCATTACTTCTAACG+CGG 0.674561 8_2:-69474019 None:intergenic
GGAACTGCAAGTGACACTCA+AGG 0.675027 8_2:+69471856 Msa1265280:CDS
CAGAAAGCCGGAAAGTGACG+GGG 0.676406 8_2:-69468580 None:intergenic
GCATGGAAGAGCTAGCAGCA+TGG 0.678116 8_2:-69473914 None:intergenic
GGCCACGCAGCTCATAGACG+TGG 0.680553 8_2:-69472507 None:intergenic
TGATTCCAACAGTGGAAGTG+TGG 0.681364 8_2:+69471685 Msa1265280:CDS
GTTCTGGTTGATTCCAACAG+TGG 0.682091 8_2:+69471677 Msa1265280:CDS
GCTCTTCCTCTATTCACAGG+AGG 0.683262 8_2:+69471617 Msa1265280:CDS
TTAACAATAGCATGGTGACG+AGG 0.687450 8_2:+69473718 Msa1265280:CDS
CATTCGTGAAGCCAAGACAG+TGG 0.688012 8_2:+69471991 Msa1265280:CDS
ATGCAGAGACCACCTACCGA+CGG 0.690427 8_2:+69468998 Msa1265280:CDS
AAAGAGACCTTTGTTGAACG+GGG 0.691944 8_2:+69471835 Msa1265280:CDS
TCATCCTTCCATGAATACTG+AGG 0.700726 8_2:+69474091 Msa1265280:CDS
TGAAGATCAAGGCAGCAATG+AGG 0.700972 8_2:+69474204 Msa1265280:CDS
AATTGTTGAAGCTCTCAAGG+TGG 0.705133 8_2:+69469916 Msa1265280:CDS
ACTGCAAGTGACACTCAAGG+AGG 0.718184 8_2:+69471859 Msa1265280:CDS
GAGCAGGTTGTAGAGTACGA+TGG 0.728618 8_2:+69472884 Msa1265280:CDS
AACCACGTCTATGAGCTGCG+TGG 0.733614 8_2:+69472505 Msa1265280:CDS
CATGTGGTGAAAGAACGCCA+AGG 0.747220 8_2:+69471812 Msa1265280:CDS
AGAGGAATTTGAAAGCCATG+TGG 0.749246 8_2:+69471796 Msa1265280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATAAAAATAAAAAAA+AGG + chr8_2:69468368-69468387 Msa1265280:five_prime_UTR 0.0%
!! TATTTAATTATTATATTATA+TGG + chr8_2:69468912-69468931 Msa1265280:intron 0.0%
!! AAAATAAAATATAATAAAAT+GGG - chr8_2:69472352-69472371 None:intergenic 0.0%
!! TAAAATAAAATATAATAAAA+TGG - chr8_2:69472353-69472372 None:intergenic 0.0%
!!! ATTATTATATTATATGGTTT+TGG + chr8_2:69468918-69468937 Msa1265280:intron 10.0%
!! AATGAAAATTCAAATTAAAA+AGG - chr8_2:69469827-69469846 None:intergenic 10.0%
!! TAAATTAAATTTAACTATGA+TGG - chr8_2:69471477-69471496 None:intergenic 10.0%
!! TTCATATCAATTATATTAAT+TGG - chr8_2:69472650-69472669 None:intergenic 10.0%
!! AAAAATAAAAATGATACATT+AGG - chr8_2:69473380-69473399 None:intergenic 10.0%
!!! AATTTTTTTAAGATTAGAGT+AGG + chr8_2:69468875-69468894 Msa1265280:intron 15.0%
!! ATTGAAAATAATTTACTAAC+TGG - chr8_2:69469177-69469196 None:intergenic 15.0%
!!! TAGCTTTAGTTTTTTTTTTT+GGG + chr8_2:69469711-69469730 Msa1265280:intron 15.0%
!!! ATTTGAATTTTCATTCTTAA+TGG + chr8_2:69469832-69469851 Msa1265280:intron 15.0%
!!! TTTTTGATTCAGTAATATTT+TGG + chr8_2:69470031-69470050 Msa1265280:intron 15.0%
!!! AACTACAAATATTTTGAAAT+TGG - chr8_2:69470615-69470634 None:intergenic 15.0%
!!! TTACATTCTAAAAATTTCAT+TGG - chr8_2:69471283-69471302 None:intergenic 15.0%
!! ATAAAATATAATAAAATGGG+TGG - chr8_2:69472349-69472368 None:intergenic 15.0%
!! TTTGAATTACTGTATCTATT+AGG + chr8_2:69468815-69468834 Msa1265280:intron 20.0%
!! TTGAATTACTGTATCTATTA+GGG + chr8_2:69468816-69468835 Msa1265280:intron 20.0%
!!! TTTGTGTAATTTTGTTTTGT+AGG + chr8_2:69468952-69468971 Msa1265280:intron 20.0%
!!! TTGTGTAATTTTGTTTTGTA+GGG + chr8_2:69468953-69468972 Msa1265280:intron 20.0%
!! TCAACAAAAAAGATAAAGAA+GGG - chr8_2:69469530-69469549 None:intergenic 20.0%
!! TTCAACAAAAAAGATAAAGA+AGG - chr8_2:69469531-69469550 None:intergenic 20.0%
!!! ATGTGAATTTTTCTTCTTAA+TGG + chr8_2:69469555-69469574 Msa1265280:intron 20.0%
!!! CTAGCTTTAGTTTTTTTTTT+TGG + chr8_2:69469710-69469729 Msa1265280:intron 20.0%
!!! ATTCAGTAATATTTTGGTTT+GGG + chr8_2:69470037-69470056 Msa1265280:intron 20.0%
!! ACAAATACAATAAAAATGCA+TGG - chr8_2:69470669-69470688 None:intergenic 20.0%
!! TCAAAAACACAAAGATATAA+GGG - chr8_2:69470760-69470779 None:intergenic 20.0%
!! TTCAAAAACACAAAGATATA+AGG - chr8_2:69470761-69470780 None:intergenic 20.0%
!! TTGAATCTAAATCTAATAGA+GGG - chr8_2:69470795-69470814 None:intergenic 20.0%
!!! TATTTCTATTTAATGTCTCA+AGG - chr8_2:69471164-69471183 None:intergenic 20.0%
!!! TATTTTTAACCAGCTAATTT+AGG + chr8_2:69471182-69471201 Msa1265280:intron 20.0%
!! ATTAAATTTAACTATGATGG+TGG - chr8_2:69471474-69471493 None:intergenic 20.0%
!! TTCTAATAAGTTAAAATTCC+AGG + chr8_2:69471528-69471547 Msa1265280:intron 20.0%
!!! ATATTAAAAAATGGTGTTGT+AGG - chr8_2:69472100-69472119 None:intergenic 20.0%
!!! TTTATTTTAATGTAGATCCT+TGG + chr8_2:69472364-69472383 Msa1265280:intron 20.0%
!!! TTATTTTAATGTAGATCCTT+GGG + chr8_2:69472365-69472384 Msa1265280:intron 20.0%
!!! TCTGATACCTTTAATTTTTT+TGG + chr8_2:69472809-69472828 Msa1265280:intron 20.0%
!!! CTGATACCTTTAATTTTTTT+GGG + chr8_2:69472810-69472829 Msa1265280:intron 20.0%
!! TTCTATTCCATTCAATTATT+TGG - chr8_2:69473098-69473117 None:intergenic 20.0%
!! TTTAAGAAATATGATAGAAC+AGG + chr8_2:69473128-69473147 Msa1265280:intron 20.0%
!! TTAAGAAATATGATAGAACA+GGG + chr8_2:69473129-69473148 Msa1265280:intron 20.0%
!!! AAAAGTATTTGTATAACTAG+GGG - chr8_2:69473248-69473267 None:intergenic 20.0%
!!! GAAAAGTATTTGTATAACTA+GGG - chr8_2:69473249-69473268 None:intergenic 20.0%
!!! AGAAAAGTATTTGTATAACT+AGG - chr8_2:69473250-69473269 None:intergenic 20.0%
! GTTTCTCTTTGTATTATTTG+TGG - chr8_2:69468413-69468432 None:intergenic 25.0%
! TTCAATAAGCAAGAAATTTG+AGG - chr8_2:69468698-69468717 None:intergenic 25.0%
!! TTTTCTTGACTCTAATTTCA+AGG + chr8_2:69468719-69468738 Msa1265280:five_prime_UTR 25.0%
! ATTTACTAACTGGACTAAAA+AGG - chr8_2:69469167-69469186 None:intergenic 25.0%
! GTAATACTCGTTATTAATGT+TGG + chr8_2:69469499-69469518 Msa1265280:intron 25.0%
! TTATGCAACGATAATCAAAA+TGG - chr8_2:69469589-69469608 None:intergenic 25.0%
! GATTGTAATAGCTATTTGAA+TGG + chr8_2:69469653-69469672 Msa1265280:intron 25.0%
! AAAACAAATAGCAGAAATCA+GGG - chr8_2:69470009-69470028 None:intergenic 25.0%
!!! GATTCAGTAATATTTTGGTT+TGG + chr8_2:69470036-69470055 Msa1265280:intron 25.0%
!!! TTCAGTAATATTTTGGTTTG+GGG + chr8_2:69470038-69470057 Msa1265280:intron 25.0%
!!! ACTTTTTAGTTGGAGTAAAA+AGG - chr8_2:69470103-69470122 None:intergenic 25.0%
! TTGGAAATAAAAGAACCAAA+TGG - chr8_2:69470350-69470369 None:intergenic 25.0%
!! CATTCATTTGATAATTTGTG+TGG + chr8_2:69470384-69470403 Msa1265280:intron 25.0%
! TTGATGCTCAAATAAATGAA+TGG + chr8_2:69470483-69470502 Msa1265280:intron 25.0%
! GAAATTTATTACCTACAAGT+TGG + chr8_2:69470586-69470605 Msa1265280:intron 25.0%
! GGAGATAACACATAATTTAA+GGG - chr8_2:69470648-69470667 None:intergenic 25.0%
! TGGAGATAACACATAATTTA+AGG - chr8_2:69470649-69470668 None:intergenic 25.0%
! CTTGAATCTAAATCTAATAG+AGG - chr8_2:69470796-69470815 None:intergenic 25.0%
! CTCTATTAGATTTAGATTCA+AGG + chr8_2:69470794-69470813 Msa1265280:intron 25.0%
!!! AAGAAAGTATTAAGTTAGAG+AGG + chr8_2:69470851-69470870 Msa1265280:intron 25.0%
!! ACACCACATTATTTATTTCT+CGG + chr8_2:69470998-69471017 Msa1265280:intron 25.0%
! TTTAGTAAAAGAAAGTAGCA+GGG - chr8_2:69471039-69471058 None:intergenic 25.0%
!! TTTTAGTAAAAGAAAGTAGC+AGG - chr8_2:69471040-69471059 None:intergenic 25.0%
!! TAATTTAGGTTCTTGCATAT+AGG + chr8_2:69471196-69471215 Msa1265280:intron 25.0%
! TTTACGTGTATAACTTTGAT+AGG + chr8_2:69471236-69471255 Msa1265280:intron 25.0%
! TTTACTGTTAAAGATCATAG+AGG + chr8_2:69472016-69472035 Msa1265280:CDS 25.0%
! CTTCTTATACACTGTATAAA+GGG - chr8_2:69472134-69472153 None:intergenic 25.0%
! AATATAATAAAATGGGTGGA+AGG - chr8_2:69472345-69472364 None:intergenic 25.0%
!! AATCAGAAAAGTGCATATTA+TGG + chr8_2:69472725-69472744 Msa1265280:intron 25.0%
! GACTTTCCCAAAAAAATTAA+AGG - chr8_2:69472819-69472838 None:intergenic 25.0%
! TTAGGAACCAAATAATTGAA+TGG + chr8_2:69473088-69473107 Msa1265280:intron 25.0%
! TAAGAAATATGATAGAACAG+GGG + chr8_2:69473130-69473149 Msa1265280:intron 25.0%
! GGAATACAATGATAAAAAAG+GGG - chr8_2:69473227-69473246 None:intergenic 25.0%
! GGGAATACAATGATAAAAAA+GGG - chr8_2:69473228-69473247 None:intergenic 25.0%
! AAATGATACATTAGGATTCA+AGG - chr8_2:69473372-69473391 None:intergenic 25.0%
! ATGTATATGCAAATTTCTCT+TGG - chr8_2:69473599-69473618 None:intergenic 25.0%
! AGAACATCAGAAAAATCTTA+AGG - chr8_2:69474332-69474351 None:intergenic 25.0%
!! ATGTTATCTCATTTTCATTG+TGG + chr8_2:69474673-69474692 Msa1265280:three_prime_UTR 25.0%
ACAAAATCGATTATGGGTAA+TGG - chr8_2:69468465-69468484 None:intergenic 30.0%
AAAGATAACTTAGCAGTGTT+TGG - chr8_2:69468534-69468553 None:intergenic 30.0%
AAGGAAAAATAACAGAAAGC+CGG - chr8_2:69468595-69468614 None:intergenic 30.0%
!! AGTGAAGTATTGAAGAGTAA+AGG - chr8_2:69468614-69468633 None:intergenic 30.0%
GTAAAAGAAACGAAGTGTAA+CGG - chr8_2:69468664-69468683 None:intergenic 30.0%
CAATACCAAGATTGTTAAGT+TGG + chr8_2:69469263-69469282 Msa1265280:intron 30.0%
AATGTCCAACTTAACAATCT+TGG - chr8_2:69469271-69469290 None:intergenic 30.0%
AATTGACAACTGACAACAAA+AGG - chr8_2:69469475-69469494 None:intergenic 30.0%
ATATCAGAAAGAATCTTCCT+AGG - chr8_2:69469616-69469635 None:intergenic 30.0%
!!! ACTCGAGTTTCTTTTTTCTA+AGG + chr8_2:69469746-69469765 Msa1265280:intron 30.0%
GAAAACAAATAGCAGAAATC+AGG - chr8_2:69470010-69470029 None:intergenic 30.0%
!!! TCAGTAATATTTTGGTTTGG+GGG + chr8_2:69470039-69470058 Msa1265280:intron 30.0%
!! GGTTCTTTTATTTCCAATCT+TGG + chr8_2:69470353-69470372 Msa1265280:intron 30.0%
ACTGTGTTAAGTGTTAACTA+TGG + chr8_2:69470730-69470749 Msa1265280:intron 30.0%
TGTTAAGTGTTAACTATGGT+TGG + chr8_2:69470734-69470753 Msa1265280:intron 30.0%
AAGTATTAAGTTAGAGAGGT+AGG + chr8_2:69470855-69470874 Msa1265280:intron 30.0%
TTTGTAGTTTCATTGTTGGT+TGG - chr8_2:69470898-69470917 None:intergenic 30.0%
AACCAACAATGAAACTACAA+AGG + chr8_2:69470897-69470916 Msa1265280:intron 30.0%
!! CAAAGGCATTTCTATTTCAA+AGG + chr8_2:69470914-69470933 Msa1265280:intron 30.0%
TTCTATTTCAAAGGATGATG+TGG + chr8_2:69470923-69470942 Msa1265280:intron 30.0%
TTAATGTCTCAAGGAAATCA+GGG - chr8_2:69471155-69471174 None:intergenic 30.0%
TTTAATGTCTCAAGGAAATC+AGG - chr8_2:69471156-69471175 None:intergenic 30.0%
TAAAGTGTACAGTAAGTCAT+TGG + chr8_2:69471361-69471380 Msa1265280:intron 30.0%
TAAGAAGAAACTACGTGTTA+AGG + chr8_2:69471394-69471413 Msa1265280:intron 30.0%
!! TCGAGTTTTATACATGATTC+AGG - chr8_2:69471722-69471741 None:intergenic 30.0%
ACAATGAAGATGATGAAGAT+TGG + chr8_2:69471768-69471787 Msa1265280:CDS 30.0%
TATTTACAGACAATTCAAGC+TGG + chr8_2:69471906-69471925 Msa1265280:CDS 30.0%
GCTTCTTATACACTGTATAA+AGG - chr8_2:69472135-69472154 None:intergenic 30.0%
CACAAAAAGTTGAATAATGC+TGG + chr8_2:69472220-69472239 Msa1265280:CDS 30.0%
TTAAGGATCAACAGAAATTG+CGG + chr8_2:69472278-69472297 Msa1265280:CDS 30.0%
TCCATCTTTATCTTGAATGT+AGG + chr8_2:69472318-69472337 Msa1265280:intron 30.0%
ACCTACATTCAAGATAAAGA+TGG - chr8_2:69472322-69472341 None:intergenic 30.0%
ACTTTCAATGGAAAAAATGC+AGG - chr8_2:69472598-69472617 None:intergenic 30.0%
AAACTACAAACTCTGAACAT+TGG - chr8_2:69472755-69472774 None:intergenic 30.0%
!!! TAATTTTTTTGGGAAAGTCC+AGG + chr8_2:69472820-69472839 Msa1265280:intron 30.0%
ATCTGAAAATGAACTTCATG+TGG + chr8_2:69472949-69472968 Msa1265280:CDS 30.0%
! AGAGTATTCTCTATTGTGAA+GGG - chr8_2:69473179-69473198 None:intergenic 30.0%
! TAGAGTATTCTCTATTGTGA+AGG - chr8_2:69473180-69473199 None:intergenic 30.0%
GGGGAATACAATGATAAAAA+AGG - chr8_2:69473229-69473248 None:intergenic 30.0%
TGCTATTGTTAAAACCTGAA+AGG - chr8_2:69473710-69473729 None:intergenic 30.0%
!! TTCAGGTTTTAACAATAGCA+TGG + chr8_2:69473710-69473729 Msa1265280:intron 30.0%
!! ATGATCATTTCTAGAGCTTT+GGG - chr8_2:69473844-69473863 None:intergenic 30.0%
!! TATGATCATTTCTAGAGCTT+TGG - chr8_2:69473845-69473864 None:intergenic 30.0%
ACCAATCATCAAAAGGATTT+GGG - chr8_2:69473950-69473969 None:intergenic 30.0%
TTGTTTGACCAATCATCAAA+AGG - chr8_2:69473957-69473976 None:intergenic 30.0%
AGTTAGATGAATAGGTTGTT+TGG + chr8_2:69474279-69474298 Msa1265280:exon 30.0%
GTTAGATGAATAGGTTGTTT+GGG + chr8_2:69474280-69474299 Msa1265280:exon 30.0%
TCAAAAACAGATTACAATCG+CGG - chr8_2:69474493-69474512 None:intergenic 30.0%
TAAAACCAGAACAAATGGAA+AGG - chr8_2:69474543-69474562 None:intergenic 30.0%
!!! TTTCCATTTGTTCTGGTTTT+AGG + chr8_2:69474542-69474561 Msa1265280:three_prime_UTR 30.0%
!!! TTCCATTTGTTCTGGTTTTA+GGG + chr8_2:69474543-69474562 Msa1265280:three_prime_UTR 30.0%
AGTTATATCTCAAATCTGAC+AGG - chr8_2:69474590-69474609 None:intergenic 30.0%
GTATTATTTGTGGTCTACTC+TGG - chr8_2:69468403-69468422 None:intergenic 35.0%
!! AATGGATTATTTGCCTGAGT+TGG - chr8_2:69468447-69468466 None:intergenic 35.0%
AGGACGACAAAATCGATTAT+GGG - chr8_2:69468471-69468490 None:intergenic 35.0%
AAGGACGACAAAATCGATTA+TGG - chr8_2:69468472-69468491 None:intergenic 35.0%
ACTGCTAAGTTATCTTTCTC+AGG + chr8_2:69468537-69468556 Msa1265280:five_prime_UTR 35.0%
! AGTGAGACGGAGATATTTTA+TGG - chr8_2:69468641-69468660 None:intergenic 35.0%
AAGATTAGAGTAGGTGATGA+TGG + chr8_2:69468884-69468903 Msa1265280:intron 35.0%
!! GTTAAGTTGGACATTTGTTG+TGG + chr8_2:69469276-69469295 Msa1265280:intron 35.0%
TGAAAACTCACACACACAAA+GGG - chr8_2:69469328-69469347 None:intergenic 35.0%
TTGAAAACTCACACACACAA+AGG - chr8_2:69469329-69469348 None:intergenic 35.0%
TTAATGACCGACTAATCAGT+TGG + chr8_2:69469434-69469453 Msa1265280:intron 35.0%
TGGTAATCCAACTGATTAGT+CGG - chr8_2:69469444-69469463 None:intergenic 35.0%
ACTAATCAGTTGGATTACCA+TGG + chr8_2:69469444-69469463 Msa1265280:intron 35.0%
TGTAATTGTTGAAGCTCTCA+AGG + chr8_2:69469913-69469932 Msa1265280:CDS 35.0%
CTTACAACTCTACGAAGAAT+AGG - chr8_2:69469974-69469993 None:intergenic 35.0%
!!! TAATATTTTGGTTTGGGGGT+GGG + chr8_2:69470043-69470062 Msa1265280:intron 35.0%
!! CGGGAAAATGACTTTTTAGT+TGG - chr8_2:69470113-69470132 None:intergenic 35.0%
TTTAAGAAGGGACATTATGC+GGG - chr8_2:69470132-69470151 None:intergenic 35.0%
GTTTAAGAAGGGACATTATG+CGG - chr8_2:69470133-69470152 None:intergenic 35.0%
TATGACATGGCGTTTAAGAA+GGG - chr8_2:69470144-69470163 None:intergenic 35.0%
ATATGACATGGCGTTTAAGA+AGG - chr8_2:69470145-69470164 None:intergenic 35.0%
! TTTGATTTCAGTGCTCCATT+TGG + chr8_2:69470332-69470351 Msa1265280:intron 35.0%
!! TGAATGGTACTGATTGAAAC+AGG + chr8_2:69470499-69470518 Msa1265280:intron 35.0%
! GAAATTGGTTTCCAACTTGT+AGG - chr8_2:69470600-69470619 None:intergenic 35.0%
ATTTGTCCATAGACTAAGCA+AGG + chr8_2:69470683-69470702 Msa1265280:intron 35.0%
! ATCCTTTAAGCTAGCTTGAA+AGG + chr8_2:69470826-69470845 Msa1265280:intron 35.0%
TGCCTTTGTAGTTTCATTGT+TGG - chr8_2:69470902-69470921 None:intergenic 35.0%
GTGCCGAGAAATAAATAATG+TGG - chr8_2:69471004-69471023 None:intergenic 35.0%
ATGCAAGAACCTAAATTAGC+TGG - chr8_2:69471194-69471213 None:intergenic 35.0%
CGTGTATAACTTTGATAGGA+TGG + chr8_2:69471240-69471259 Msa1265280:intron 35.0%
AACTTTGATAGGATGGACAT+TGG + chr8_2:69471247-69471266 Msa1265280:intron 35.0%
CTTACTGTACACTTTAAGCT+AGG - chr8_2:69471357-69471376 None:intergenic 35.0%
ATTTAATTCATTGGCGAGTC+TGG + chr8_2:69471498-69471517 Msa1265280:intron 35.0%
TCAACCAGAACAACATGAAT+TGG - chr8_2:69471668-69471687 None:intergenic 35.0%
CATTGTTAAAATCGCCTTCA+AGG - chr8_2:69471754-69471773 None:intergenic 35.0%
TCATTCCAAGCCTGAATTTA+CGG - chr8_2:69471940-69471959 None:intergenic 35.0%
TAAATTCAGGCTTGGAATGA+AGG + chr8_2:69471940-69471959 Msa1265280:CDS 35.0%
AAGATCATAGAGGAGAATGT+AGG + chr8_2:69472026-69472045 Msa1265280:intron 35.0%
AGATCATAGAGGAGAATGTA+GGG + chr8_2:69472027-69472046 Msa1265280:intron 35.0%
GTATGGAGATTGGAGAAAAT+AGG + chr8_2:69472181-69472200 Msa1265280:CDS 35.0%
GAGATTGGAGAAAATAGGTA+AGG + chr8_2:69472186-69472205 Msa1265280:CDS 35.0%
TTGGAGAAAATAGGTAAGGA+TGG + chr8_2:69472190-69472209 Msa1265280:CDS 35.0%
TGGAGAAAATAGGTAAGGAT+GGG + chr8_2:69472191-69472210 Msa1265280:CDS 35.0%
AAGTCGAAGAAAGTCTTCAA+CGG - chr8_2:69472254-69472273 None:intergenic 35.0%
TTAGAACACATGTCTTTGCA+TGG - chr8_2:69472429-69472448 None:intergenic 35.0%
CCAACATTTCTTGTATCTTC+TGG - chr8_2:69472475-69472494 None:intergenic 35.0%
CCAGAAGATACAAGAAATGT+TGG + chr8_2:69472472-69472491 Msa1265280:CDS 35.0%
AGAATTGCTCTCCTGTTATA+AGG - chr8_2:69472531-69472550 None:intergenic 35.0%
TTCTCTTAGCGATAATCAGA+AGG + chr8_2:69472561-69472580 Msa1265280:CDS 35.0%
AACACATGCTCAACTTTCAA+TGG - chr8_2:69472610-69472629 None:intergenic 35.0%
!! TTCCTTTGAAGCTCTCTATT+AGG + chr8_2:69472773-69472792 Msa1265280:intron 35.0%
TTCCTAATAGAGAGCTTCAA+AGG - chr8_2:69472778-69472797 None:intergenic 35.0%
TGAAGCTCTCTATTAGGAAT+AGG + chr8_2:69472779-69472798 Msa1265280:intron 35.0%
GAAGCTCTCTATTAGGAATA+GGG + chr8_2:69472780-69472799 Msa1265280:intron 35.0%
CGTAGATTCATTGGTGAAAA+AGG + chr8_2:69472847-69472866 Msa1265280:CDS 35.0%
! TGAAAAAGGCATACGACAAT+TGG + chr8_2:69472861-69472880 Msa1265280:CDS 35.0%
! GAAAAAGGCATACGACAATT+GGG + chr8_2:69472862-69472881 Msa1265280:CDS 35.0%
GTGGAGTCAATTGATTATGA+TGG + chr8_2:69472968-69472987 Msa1265280:CDS 35.0%
GAGTCAATTGATTATGATGG+CGG + chr8_2:69472971-69472990 Msa1265280:CDS 35.0%
TGTTCAGAAGTAACAGACAT+GGG - chr8_2:69473028-69473047 None:intergenic 35.0%
AGTATTCTCTATTGTGAAGG+GGG - chr8_2:69473177-69473196 None:intergenic 35.0%
GAGTATTCTCTATTGTGAAG+GGG - chr8_2:69473178-69473197 None:intergenic 35.0%
! AGAAACCAAATTTGAGACAC+AGG - chr8_2:69473473-69473492 None:intergenic 35.0%
TATGCAAATTTCTCTTGGAC+AGG - chr8_2:69473594-69473613 None:intergenic 35.0%
ACATCATACACAATCAGCAA+AGG - chr8_2:69473655-69473674 None:intergenic 35.0%
TCCATATACATTCTCCTTTC+AGG + chr8_2:69473693-69473712 Msa1265280:intron 35.0%
ACCTGAAAGGAGAATGTATA+TGG - chr8_2:69473697-69473716 None:intergenic 35.0%
CTGTCTAACGACCATTTATT+AGG + chr8_2:69473804-69473823 Msa1265280:CDS 35.0%
AGAAATGATCATAGCACAGT+AGG + chr8_2:69473852-69473871 Msa1265280:CDS 35.0%
GAAATGATCATAGCACAGTA+GGG + chr8_2:69473853-69473872 Msa1265280:CDS 35.0%
CCAATCATCAAAAGGATTTG+GGG - chr8_2:69473949-69473968 None:intergenic 35.0%
GACCAATCATCAAAAGGATT+TGG - chr8_2:69473951-69473970 None:intergenic 35.0%
! TTGATGATTGGTCAAACAAC+AGG + chr8_2:69473958-69473977 Msa1265280:CDS 35.0%
! TGATGATTGGTCAAACAACA+GGG + chr8_2:69473959-69473978 Msa1265280:CDS 35.0%
!!! TGTTGATGACTTCTTTTCAG+AGG + chr8_2:69473989-69474008 Msa1265280:CDS 35.0%
GTATCTCATTACTTCTAACG+CGG - chr8_2:69474022-69474041 None:intergenic 35.0%
ATAACCATCCTCAGTATTCA+TGG - chr8_2:69474102-69474121 None:intergenic 35.0%
GATAGAGGAGTTAGATGAAT+AGG + chr8_2:69474271-69474290 Msa1265280:CDS 35.0%
TTGTTTGGGCAAATGATAGT+AGG + chr8_2:69474294-69474313 Msa1265280:three_prime_UTR 35.0%
AACCAAGAATGTTGATACCA+TGG - chr8_2:69474398-69474417 None:intergenic 35.0%
TGCTGTAAAATCAGATACAC+AGG - chr8_2:69474425-69474444 None:intergenic 35.0%
!!! GTACAGTTTTGTTCAAGCTT+AGG + chr8_2:69474462-69474481 Msa1265280:three_prime_UTR 35.0%
!! TGATAGAGGAGAGTATTAAC+AGG - chr8_2:69474520-69474539 None:intergenic 35.0%
AACAAATGGAAAGGTGATAG+AGG - chr8_2:69474534-69474553 None:intergenic 35.0%
TATCACCTTTCCATTTGTTC+TGG + chr8_2:69474535-69474554 Msa1265280:three_prime_UTR 35.0%
!!! TCCATTTGTTCTGGTTTTAG+GGG + chr8_2:69474544-69474563 Msa1265280:three_prime_UTR 35.0%
ACTCAATGACTTTCCAACTC+AGG + chr8_2:69468431-69468450 Msa1265280:five_prime_UTR 40.0%
AGAGAAGAGAGAGAGAAAGA+AGG - chr8_2:69468491-69468510 None:intergenic 40.0%
! GAGACGGAGATATTTTATGG+TGG - chr8_2:69468638-69468657 None:intergenic 40.0%
AATTAGTACCTAGCAAGAGC+AGG - chr8_2:69469088-69469107 None:intergenic 40.0%
CTACTTTACTGTATCCCAGT+TGG + chr8_2:69469355-69469374 Msa1265280:intron 40.0%
GGAAGTAAACAGTTCCAACT+GGG - chr8_2:69469372-69469391 None:intergenic 40.0%
TGGAAGTAAACAGTTCCAAC+TGG - chr8_2:69469373-69469392 None:intergenic 40.0%
CCAACACGACAAAACATCTT+TGG - chr8_2:69469393-69469412 None:intergenic 40.0%
! CCAAAGATGTTTTGTCGTGT+TGG + chr8_2:69469390-69469409 Msa1265280:intron 40.0%
GACAACAAAAGGTTTGACCA+TGG - chr8_2:69469464-69469483 None:intergenic 40.0%
TATCGTTGCATAATGCACCT+AGG + chr8_2:69469596-69469615 Msa1265280:intron 40.0%
GCTATTTGAATGGCATAGCA+TGG + chr8_2:69469663-69469682 Msa1265280:intron 40.0%
CAACCATGGAATTCTGCATT+TGG + chr8_2:69469687-69469706 Msa1265280:intron 40.0%
TAGCCAAATGCAGAATTCCA+TGG - chr8_2:69469693-69469712 None:intergenic 40.0%
AATTGTTGAAGCTCTCAAGG+TGG + chr8_2:69469916-69469935 Msa1265280:CDS 40.0%
!!! GTAATATTTTGGTTTGGGGG+TGG + chr8_2:69470042-69470061 Msa1265280:intron 40.0%
!!! AATATTTTGGTTTGGGGGTG+GGG + chr8_2:69470044-69470063 Msa1265280:intron 40.0%
TTAAACGCCATGTCATATCG+TGG + chr8_2:69470147-69470166 Msa1265280:intron 40.0%
ACTGTCATGCTGTGAACAAT+AGG - chr8_2:69470297-69470316 None:intergenic 40.0%
GAATGATGTCACACCAAGAT+TGG - chr8_2:69470369-69470388 None:intergenic 40.0%
TTGCAACCTTGCTTAGTCTA+TGG - chr8_2:69470692-69470711 None:intergenic 40.0%
! CTCCTTTCAAGCTAGCTTAA+AGG - chr8_2:69470831-69470850 None:intergenic 40.0%
! GATGGTGGCATTAATTGAAG+TGG - chr8_2:69471459-69471478 None:intergenic 40.0%
TCTTCCCCTAAAAGGATTGA+AGG + chr8_2:69471551-69471570 Msa1265280:CDS 40.0%
! AGGACCTTCAATCCTTTTAG+GGG - chr8_2:69471558-69471577 None:intergenic 40.0%
! CAGGACCTTCAATCCTTTTA+GGG - chr8_2:69471559-69471578 None:intergenic 40.0%
! TCAGGACCTTCAATCCTTTT+AGG - chr8_2:69471560-69471579 None:intergenic 40.0%
AAAAGGATTGAAGGTCCTGA+TGG + chr8_2:69471560-69471579 Msa1265280:CDS 40.0%
GAAACTTGCGGCTTCAATTT+AGG + chr8_2:69471585-69471604 Msa1265280:CDS 40.0%
! ACTTTTCCTCCTGTGAATAG+AGG - chr8_2:69471626-69471645 None:intergenic 40.0%
TCTATTCACAGGAGGAAAAG+TGG + chr8_2:69471625-69471644 Msa1265280:CDS 40.0%
CATGGCTTTCAAATTCCTCT+TGG - chr8_2:69471796-69471815 None:intergenic 40.0%
AGAGGAATTTGAAAGCCATG+TGG + chr8_2:69471796-69471815 Msa1265280:CDS 40.0%
TCAACAAAGGTCTCTTTCCT+TGG - chr8_2:69471832-69471851 None:intergenic 40.0%
GGAAAGAGACCTTTGTTGAA+CGG + chr8_2:69471833-69471852 Msa1265280:CDS 40.0%
GAAAGAGACCTTTGTTGAAC+GGG + chr8_2:69471834-69471853 Msa1265280:CDS 40.0%
AAAGAGACCTTTGTTGAACG+GGG + chr8_2:69471835-69471854 Msa1265280:CDS 40.0%
GGATAAGAAGCCGTAAATTC+AGG + chr8_2:69471927-69471946 Msa1265280:CDS 40.0%
!! ATGAAGGTTGCATCTGGTTT+TGG + chr8_2:69471956-69471975 Msa1265280:CDS 40.0%
AACAGTAAAAGCCACTGTCT+TGG - chr8_2:69472005-69472024 None:intergenic 40.0%
!! AGAAGGGAAAGCATTGAAGT+TGG - chr8_2:69472072-69472091 None:intergenic 40.0%
AAGCATTATCCTCCTGCATT+GGG + chr8_2:69472151-69472170 Msa1265280:CDS 40.0%
! TGAAGACTTTCTTCGACTTG+TGG + chr8_2:69472255-69472274 Msa1265280:CDS 40.0%
! CTTTCTTCGACTTGTGGTTA+AGG + chr8_2:69472261-69472280 Msa1265280:CDS 40.0%
TTAATGTAGATCCTTGGGAG+CGG + chr8_2:69472370-69472389 Msa1265280:intron 40.0%
CGGTATGTCAAACAAGATGT+GGG + chr8_2:69472390-69472409 Msa1265280:CDS 40.0%
! GCAAAGACATGTGTTCTAAG+CGG + chr8_2:69472430-69472449 Msa1265280:CDS 40.0%
! CAAAGACATGTGTTCTAAGC+GGG + chr8_2:69472431-69472450 Msa1265280:CDS 40.0%
TGAGCATGTGTTTATGTTGC+TGG + chr8_2:69472618-69472637 Msa1265280:intron 40.0%
GTTCAGAAGTAACAGACATG+GGG - chr8_2:69473027-69473046 None:intergenic 40.0%
CTGTTCAGAAGTAACAGACA+TGG - chr8_2:69473029-69473048 None:intergenic 40.0%
ATTAATTCAGCGATGCCAGT+TGG + chr8_2:69473052-69473071 Msa1265280:intron 40.0%
AGGAAACAGAAACGCTGTTA+GGG - chr8_2:69473352-69473371 None:intergenic 40.0%
AAGGAAACAGAAACGCTGTT+AGG - chr8_2:69473353-69473372 None:intergenic 40.0%
TCAAAAGAAAAGGAGAAGGG+AGG - chr8_2:69473429-69473448 None:intergenic 40.0%
CGCTCAAAAGAAAAGGAGAA+GGG - chr8_2:69473432-69473451 None:intergenic 40.0%
TCGCTCAAAAGAAAAGGAGA+AGG - chr8_2:69473433-69473452 None:intergenic 40.0%
GTGACATCGCTCAAAAGAAA+AGG - chr8_2:69473439-69473458 None:intergenic 40.0%
AGTCACCTGTGTCTCAAATT+TGG + chr8_2:69473465-69473484 Msa1265280:intron 40.0%
! TTAACAATAGCATGGTGACG+AGG + chr8_2:69473718-69473737 Msa1265280:CDS 40.0%
AGAGCTGGAATTTCCAATCA+AGG - chr8_2:69473757-69473776 None:intergenic 40.0%
TGATTGGAAATTCCAGCTCT+CGG + chr8_2:69473757-69473776 Msa1265280:CDS 40.0%
! GGTGAGCATTGCCTAATAAA+TGG - chr8_2:69473818-69473837 None:intergenic 40.0%
!! CATTTCTAGAGCTTTGGGAT+TGG - chr8_2:69473839-69473858 None:intergenic 40.0%
!! CCTGAAGTTGATGATTGAGA+AGG - chr8_2:69473891-69473910 None:intergenic 40.0%
CCTTCTCAATCATCAACTTC+AGG + chr8_2:69473888-69473907 Msa1265280:CDS 40.0%
!! CCCCAAATCCTTTTGATGAT+TGG + chr8_2:69473946-69473965 Msa1265280:CDS 40.0%
TCATCCTTCCATGAATACTG+AGG + chr8_2:69474091-69474110 Msa1265280:CDS 40.0%
TAGGAGATGGCATGAATGAT+GGG - chr8_2:69474130-69474149 None:intergenic 40.0%
ATAGGAGATGGCATGAATGA+TGG - chr8_2:69474131-69474150 None:intergenic 40.0%
! ATACCATGGACTGCACAATT+TGG - chr8_2:69474384-69474403 None:intergenic 40.0%
GTCCATGGTATCAACATTCT+TGG + chr8_2:69474393-69474412 Msa1265280:three_prime_UTR 40.0%
!!! CCATTTGTTCTGGTTTTAGG+GGG + chr8_2:69474545-69474564 Msa1265280:three_prime_UTR 40.0%
TCTCAAATCTGACAGGTGTT+CGG - chr8_2:69474583-69474602 None:intergenic 40.0%
AACAGAAAGCCGGAAAGTGA+CGG - chr8_2:69468585-69468604 None:intergenic 45.0%
ATGATCAGCCTGAACGAAAG+AGG + chr8_2:69469062-69469081 Msa1265280:CDS 45.0%
TTGGTATTGTCAGCTGAGCT+AGG - chr8_2:69469252-69469271 None:intergenic 45.0%
!! GGACATTTGTTGTGGTTACC+CGG + chr8_2:69469284-69469303 Msa1265280:intron 45.0%
!! GACATTTGTTGTGGTTACCC+GGG + chr8_2:69469285-69469304 Msa1265280:intron 45.0%
AGGATCTTAGATTCGATCCC+GGG - chr8_2:69469305-69469324 None:intergenic 45.0%
GAGGATCTTAGATTCGATCC+CGG - chr8_2:69469306-69469325 None:intergenic 45.0%
AAACTCACACACACAAAGGG+AGG - chr8_2:69469325-69469344 None:intergenic 45.0%
!!! ATATTTTGGTTTGGGGGTGG+GGG + chr8_2:69470045-69470064 Msa1265280:intron 45.0%
CCATGTCATATCGTGGTCTT+CGG + chr8_2:69470154-69470173 Msa1265280:intron 45.0%
GAAACAGGTGAGTGAAGAAG+TGG + chr8_2:69470514-69470533 Msa1265280:intron 45.0%
TTAGGTCCTGCAAGACTTAG+TGG + chr8_2:69470554-69470573 Msa1265280:CDS 45.0%
!! TGTTGGTTGGCCTCTTTCTA+CGG - chr8_2:69470885-69470904 None:intergenic 45.0%
AAGAAAGTAGCAGGGTCTTG+TGG - chr8_2:69471031-69471050 None:intergenic 45.0%
ATGTCTCAAGGAAATCAGGG+AGG - chr8_2:69471152-69471171 None:intergenic 45.0%
TAGGCTCAAATCGGAGAATG+GGG - chr8_2:69471330-69471349 None:intergenic 45.0%
GTAGGCTCAAATCGGAGAAT+GGG - chr8_2:69471331-69471350 None:intergenic 45.0%
ACACTTTAAGCTAGGCAGGT+AGG - chr8_2:69471349-69471368 None:intergenic 45.0%
CTGTACACTTTAAGCTAGGC+AGG - chr8_2:69471353-69471372 None:intergenic 45.0%
ATTCCAGGTCTTCCCCTAAA+AGG + chr8_2:69471543-69471562 Msa1265280:intron 45.0%
!! AATCCTTTTAGGGGAAGACC+TGG - chr8_2:69471549-69471568 None:intergenic 45.0%
GTCCTGATGGTAGAAACTTG+CGG + chr8_2:69471573-69471592 Msa1265280:CDS 45.0%
TGAATAGAGGAAGAGCCAGT+CGG - chr8_2:69471613-69471632 None:intergenic 45.0%
TTCACAGGAGGAAAAGTGGA+AGG + chr8_2:69471629-69471648 Msa1265280:CDS 45.0%
GGCTCCAATTCATGTTGTTC+TGG + chr8_2:69471661-69471680 Msa1265280:CDS 45.0%
! GTTCTGGTTGATTCCAACAG+TGG + chr8_2:69471677-69471696 Msa1265280:CDS 45.0%
TGATTCCAACAGTGGAAGTG+TGG + chr8_2:69471685-69471704 Msa1265280:CDS 45.0%
TGTTACCACACTTCCACTGT+TGG - chr8_2:69471693-69471712 None:intergenic 45.0%
! AGTGGAAGTGTGGTAACATC+TGG + chr8_2:69471695-69471714 Msa1265280:CDS 45.0%
TGATGAAGATTGGAGCCAAG+AGG + chr8_2:69471778-69471797 Msa1265280:CDS 45.0%
AAGGAGGGAGTTGGAACATT+AGG + chr8_2:69471875-69471894 Msa1265280:CDS 45.0%
AGGAGGGAGTTGGAACATTA+GGG + chr8_2:69471876-69471895 Msa1265280:CDS 45.0%
AGAAGCCGTAAATTCAGGCT+TGG + chr8_2:69471932-69471951 Msa1265280:CDS 45.0%
CTTGGAATGAAGGTTGCATC+TGG + chr8_2:69471950-69471969 Msa1265280:CDS 45.0%
! GGTGTTGTAGGTTGCAAGAA+GGG - chr8_2:69472088-69472107 None:intergenic 45.0%
!! TGGTGTTGTAGGTTGCAAGA+AGG - chr8_2:69472089-69472108 None:intergenic 45.0%
! GAAGCATTATCCTCCTGCAT+TGG + chr8_2:69472150-69472169 Msa1265280:CDS 45.0%
CATACATCATCACCCAATGC+AGG - chr8_2:69472166-69472185 None:intergenic 45.0%
! CTGCATTGGGTGATGATGTA+TGG + chr8_2:69472164-69472183 Msa1265280:CDS 45.0%
! GGGTGATGATGTATGGAGAT+TGG + chr8_2:69472171-69472190 Msa1265280:CDS 45.0%
GCGGTATGTCAAACAAGATG+TGG + chr8_2:69472389-69472408 Msa1265280:CDS 45.0%
CCAATGAATCTACGTACACC+TGG - chr8_2:69472841-69472860 None:intergenic 45.0%
CCAGGTGTACGTAGATTCAT+TGG + chr8_2:69472838-69472857 Msa1265280:intron 45.0%
GTACGATGGCAAATCACTTG+TGG + chr8_2:69472898-69472917 Msa1265280:CDS 45.0%
AGAAGTAACAGACATGGGGA+GGG - chr8_2:69473023-69473042 None:intergenic 45.0%
AACAATCGCTTACCTCCAAC+TGG - chr8_2:69473070-69473089 None:intergenic 45.0%
GTTGGAGGTAAGCGATTGTT+AGG + chr8_2:69473070-69473089 Msa1265280:intron 45.0%
TGGAATTTCCAATCAAGGCC+TGG - chr8_2:69473752-69473771 None:intergenic 45.0%
ATCAAAATGACTCCGAGAGC+TGG - chr8_2:69473772-69473791 None:intergenic 45.0%
TGATCATAGCACAGTAGGGT+TGG + chr8_2:69473857-69473876 Msa1265280:CDS 45.0%
! TCATCAAAAGGATTTGGGGC+AGG - chr8_2:69473945-69473964 None:intergenic 45.0%
TTGGTCAAACAACAGGGACA+AGG + chr8_2:69473965-69473984 Msa1265280:CDS 45.0%
TGGTCAAACAACAGGGACAA+GGG + chr8_2:69473966-69473985 Msa1265280:CDS 45.0%
! TTGCTTCGCCTTTTCAGCAT+GGG + chr8_2:69474065-69474084 Msa1265280:CDS 45.0%
CCATCCTCAGTATTCATGGA+AGG - chr8_2:69474098-69474117 None:intergenic 45.0%
CCTTCCATGAATACTGAGGA+TGG + chr8_2:69474095-69474114 Msa1265280:CDS 45.0%
TGAAGATCAAGGCAGCAATG+AGG + chr8_2:69474204-69474223 Msa1265280:CDS 45.0%
GAAAGATAGCAGCTGAGAAG+CGG + chr8_2:69474243-69474262 Msa1265280:CDS 45.0%
AAAGATAGCAGCTGAGAAGC+GGG + chr8_2:69474244-69474263 Msa1265280:CDS 45.0%
! CATGGACTGCACAATTTGGT+TGG - chr8_2:69474380-69474399 None:intergenic 45.0%
CAACCAAATTGTGCAGTCCA+TGG + chr8_2:69474378-69474397 Msa1265280:three_prime_UTR 45.0%
CCCCCTAAAACCAGAACAAA+TGG - chr8_2:69474548-69474567 None:intergenic 45.0%
! TGTGGATTGCACCAGTACAT+CGG + chr8_2:69474691-69474710 Msa1265280:three_prime_UTR 45.0%
!! TTAATTTAAATTTAATTCAT+TGG + chr8_2:69471489-69471508 Msa1265280:intron 5.0%
!! AAAAATAAGATATTAAAAAA+TGG - chr8_2:69472109-69472128 None:intergenic 5.0%
!!! TTTAAAATATTTTTAGTATT+TGG - chr8_2:69473563-69473582 None:intergenic 5.0%
!! GCAGTGTTTGGTGCAGTGTT+TGG - chr8_2:69468522-69468541 None:intergenic 50.0%
! GAAAGTGACGGGGAGTCTAA+CGG - chr8_2:69468573-69468592 None:intergenic 50.0%
! TTAGACTCCCCGTCACTTTC+CGG + chr8_2:69468573-69468592 Msa1265280:five_prime_UTR 50.0%
ACAGAAAGCCGGAAAGTGAC+GGG - chr8_2:69468584-69468603 None:intergenic 50.0%
! CGAAGTGTAACGGAGTGAGA+CGG - chr8_2:69468654-69468673 None:intergenic 50.0%
TTTCCCCATACTTGCTCCGT+CGG - chr8_2:69469017-69469036 None:intergenic 50.0%
ACGGAGCAAGTATGGGGAAA+AGG + chr8_2:69469017-69469036 Msa1265280:CDS 50.0%
CGGAGCAAGTATGGGGAAAA+GGG + chr8_2:69469018-69469037 Msa1265280:CDS 50.0%
ATCATCTCCACCACCCTCAA+GGG - chr8_2:69469044-69469063 None:intergenic 50.0%
TGGCATAGCATGGTCAACCA+TGG + chr8_2:69469673-69469692 Msa1265280:intron 50.0%
CCGAAGACCACGATATGACA+TGG - chr8_2:69470157-69470176 None:intergenic 50.0%
TGAAGAAGTGGAGCGTGCTT+TGG + chr8_2:69470526-69470545 Msa1265280:CDS 50.0%
GTCCTGCAAGACTTAGTGGA+AGG + chr8_2:69470558-69470577 Msa1265280:CDS 50.0%
GACCTTCCACTAAGTCTTGC+AGG - chr8_2:69470563-69470582 None:intergenic 50.0%
GGTAGGTATCCCGTAGAAAG+AGG + chr8_2:69470872-69470891 Msa1265280:intron 50.0%
!! GTTGGTTGGCCTCTTTCTAC+GGG - chr8_2:69470884-69470903 None:intergenic 50.0%
GGAAATCAGGGAGGCAGTAT+TGG - chr8_2:69471143-69471162 None:intergenic 50.0%
GGTAGGCTCAAATCGGAGAA+TGG - chr8_2:69471332-69471351 None:intergenic 50.0%
CTAGGCAGGTAGGCTCAAAT+CGG - chr8_2:69471339-69471358 None:intergenic 50.0%
AGCCGCAAGTTTCTACCATC+AGG - chr8_2:69471578-69471597 None:intergenic 50.0%
GCTTCAATTTAGGTCCCGAC+TGG + chr8_2:69471595-69471614 Msa1265280:CDS 50.0%
GAATAGAGGAAGAGCCAGTC+GGG - chr8_2:69471612-69471631 None:intergenic 50.0%
! CTGGCTCTTCCTCTATTCAC+AGG + chr8_2:69471614-69471633 Msa1265280:CDS 50.0%
GCTCTTCCTCTATTCACAGG+AGG + chr8_2:69471617-69471636 Msa1265280:CDS 50.0%
CTCGATGTCGTTGTCCTTGA+AGG + chr8_2:69471737-69471756 Msa1265280:CDS 50.0%
CTTGGCGTTCTTTCACCACA+TGG - chr8_2:69471814-69471833 None:intergenic 50.0%
CATGTGGTGAAAGAACGCCA+AGG + chr8_2:69471812-69471831 Msa1265280:CDS 50.0%
TGCAGTTCCCCGTTCAACAA+AGG - chr8_2:69471845-69471864 None:intergenic 50.0%
GGAACTGCAAGTGACACTCA+AGG + chr8_2:69471856-69471875 Msa1265280:CDS 50.0%
ACTGCAAGTGACACTCAAGG+AGG + chr8_2:69471859-69471878 Msa1265280:CDS 50.0%
CTGCAAGTGACACTCAAGGA+GGG + chr8_2:69471860-69471879 Msa1265280:CDS 50.0%
GGAGGGAGTTGGAACATTAG+GGG + chr8_2:69471877-69471896 Msa1265280:CDS 50.0%
CATTCGTGAAGCCAAGACAG+TGG + chr8_2:69471991-69472010 Msa1265280:CDS 50.0%
ACATCATCACCCAATGCAGG+AGG - chr8_2:69472163-69472182 None:intergenic 50.0%
TGTTTGACATACCGCTCCCA+AGG - chr8_2:69472384-69472403 None:intergenic 50.0%
TCTGTGCTCATGCAAGTGTG+AGG - chr8_2:69472695-69472714 None:intergenic 50.0%
GAGCAGGTTGTAGAGTACGA+TGG + chr8_2:69472884-69472903 Msa1265280:CDS 50.0%
CAGAAGTAACAGACATGGGG+AGG - chr8_2:69473024-69473043 None:intergenic 50.0%
AATTCAGCGATGCCAGTTGG+AGG + chr8_2:69473055-69473074 Msa1265280:intron 50.0%
TATTGTGAAGGGGGAACCCT+TGG - chr8_2:69473168-69473187 None:intergenic 50.0%
AGAAAAGGAGAAGGGAGGTG+AGG - chr8_2:69473424-69473443 None:intergenic 50.0%
TATCCAAGCCAGGCCTTGAT+TGG + chr8_2:69473741-69473760 Msa1265280:CDS 50.0%
TTTCCAATCAAGGCCTGGCT+TGG - chr8_2:69473747-69473766 None:intergenic 50.0%
! TCAAAAGGATTTGGGGCAGG+TGG - chr8_2:69473942-69473961 None:intergenic 50.0%
! CTTGCTTCGCCTTTTCAGCA+TGG + chr8_2:69474064-69474083 Msa1265280:CDS 50.0%
GATGACCTCCCATGCTGAAA+AGG - chr8_2:69474076-69474095 None:intergenic 50.0%
TCGAAGTTCGGCATAGGAGA+TGG - chr8_2:69474143-69474162 None:intergenic 50.0%
TCCTATGCCGAACTTCGATG+AGG + chr8_2:69474145-69474164 Msa1265280:CDS 50.0%
TCCTCATCGAAGTTCGGCAT+AGG - chr8_2:69474149-69474168 None:intergenic 50.0%
GAGCGATCCTCATCGAAGTT+CGG - chr8_2:69474155-69474174 None:intergenic 50.0%
TGTGGGATGGCTGAAGATCA+AGG + chr8_2:69474193-69474212 Msa1265280:CDS 50.0%
AGATCAAGGCAGCAATGAGG+TGG + chr8_2:69474207-69474226 Msa1265280:CDS 50.0%
GATCAAGGCAGCAATGAGGT+GGG + chr8_2:69474208-69474227 Msa1265280:CDS 50.0%
ATCAAGGCAGCAATGAGGTG+GGG + chr8_2:69474209-69474228 Msa1265280:CDS 50.0%
TGCTAAGGAAGCCGATGTAC+TGG - chr8_2:69474705-69474724 None:intergenic 50.0%
CAGAAAGCCGGAAAGTGACG+GGG - chr8_2:69468583-69468602 None:intergenic 55.0%
ATGCAGAGACCACCTACCGA+CGG + chr8_2:69468998-69469017 Msa1265280:CDS 55.0%
ATACTTGCTCCGTCGGTAGG+TGG - chr8_2:69469010-69469029 None:intergenic 55.0%
ACCTACCGACGGAGCAAGTA+TGG + chr8_2:69469009-69469028 Msa1265280:CDS 55.0%
CCTACCGACGGAGCAAGTAT+GGG + chr8_2:69469010-69469029 Msa1265280:CDS 55.0%
CTACCGACGGAGCAAGTATG+GGG + chr8_2:69469011-69469030 Msa1265280:CDS 55.0%
TATGGGGAAAAGGGCCCTTG+AGG + chr8_2:69469027-69469046 Msa1265280:CDS 55.0%
ATGGGGAAAAGGGCCCTTGA+GGG + chr8_2:69469028-69469047 Msa1265280:CDS 55.0%
CATCATCTCCACCACCCTCA+AGG - chr8_2:69469045-69469064 None:intergenic 55.0%
AGAGCAGGCCTCTTTCGTTC+AGG - chr8_2:69469073-69469092 None:intergenic 55.0%
GAAAGAGGCCTGCTCTTGCT+AGG + chr8_2:69469077-69469096 Msa1265280:CDS 55.0%
GAGCGTGCTTTGGCGAAGTT+AGG + chr8_2:69470536-69470555 Msa1265280:CDS 55.0%
AGGAAAAGTGGAAGGCGAGC+AGG + chr8_2:69471637-69471656 Msa1265280:CDS 55.0%
GGAAAAGTGGAAGGCGAGCA+GGG + chr8_2:69471638-69471657 Msa1265280:CDS 55.0%
GAAAAGTGGAAGGCGAGCAG+GGG + chr8_2:69471639-69471658 Msa1265280:CDS 55.0%
AAAAGTGGAAGGCGAGCAGG+GGG + chr8_2:69471640-69471659 Msa1265280:CDS 55.0%
GTGACACTCAAGGAGGGAGT+TGG + chr8_2:69471866-69471885 Msa1265280:CDS 55.0%
AACCACGTCTATGAGCTGCG+TGG + chr8_2:69472505-69472524 Msa1265280:CDS 55.0%
!! GAGCTGCGTGGCCTTATAAC+AGG + chr8_2:69472517-69472536 Msa1265280:CDS 55.0%
GGCATACGACAATTGGGAGC+AGG + chr8_2:69472868-69472887 Msa1265280:CDS 55.0%
GTAACAGACATGGGGAGGGA+TGG - chr8_2:69473019-69473038 None:intergenic 55.0%
AGGGGAGAATCACTCCTCCA+AGG + chr8_2:69473148-69473167 Msa1265280:intron 55.0%
GGGGAGAATCACTCCTCCAA+GGG + chr8_2:69473149-69473168 Msa1265280:intron 55.0%
!! AGCACAGTAGGGTTGGCTCT+TGG + chr8_2:69473864-69473883 Msa1265280:CDS 55.0%
GCATGGAAGAGCTAGCAGCA+TGG - chr8_2:69473917-69473936 None:intergenic 55.0%
! ATTTGGGGCAGGTGGTTGCA+TGG - chr8_2:69473934-69473953 None:intergenic 55.0%
! CTTCGCCTTTTCAGCATGGG+AGG + chr8_2:69474068-69474087 Msa1265280:CDS 55.0%
TCGTCCTGGCAAAGCTGTTG+TGG + chr8_2:69474175-69474194 Msa1265280:CDS 55.0%
CGTCCTGGCAAAGCTGTTGT+GGG + chr8_2:69474176-69474195 Msa1265280:CDS 55.0%
CATCCCACAACAGCTTTGCC+AGG - chr8_2:69474182-69474201 None:intergenic 55.0%
CTGGCAAAGCTGTTGTGGGA+TGG + chr8_2:69474180-69474199 Msa1265280:CDS 55.0%
! TGAGAAGCGGGCTCAGATAG+AGG + chr8_2:69474256-69474275 Msa1265280:CDS 55.0%
CCCATACTTGCTCCGTCGGT+AGG - chr8_2:69469013-69469032 None:intergenic 60.0%
AAAAGGGCCCTTGAGGGTGG+TGG + chr8_2:69469034-69469053 Msa1265280:CDS 60.0%
TGTGAAGGGGGAACCCTTGG+AGG - chr8_2:69473165-69473184 None:intergenic 60.0%
! GGTGACGAGGTATCCAAGCC+AGG + chr8_2:69473731-69473750 Msa1265280:CDS 60.0%
GATGAGGATCGCTCTCGTCC+TGG + chr8_2:69474161-69474180 Msa1265280:CDS 60.0%
GGGAAAAGGGCCCTTGAGGG+TGG + chr8_2:69469031-69469050 Msa1265280:CDS 65.0%
!! TTGGTTTGGGGGTGGGGGAC+TGG + chr8_2:69470050-69470069 Msa1265280:intron 65.0%
GGCCACGCAGCTCATAGACG+TGG - chr8_2:69472510-69472529 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 69468304 69474729 69468304 ID=Msa1265280;Name=Msa1265280
chr8_2 mRNA 69468304 69474729 69468304 ID=Msa1265280-mRNA-1;Parent=Msa1265280;Name=Msa1265280-mRNA-1;_AED=0.05;_eAED=0.05;_QI=461|0.87|0.88|1|0.87|0.88|9|437|607
chr8_2 exon 69468304 69468740 69468304 ID=Msa1265280-mRNA-1:exon:22929;Parent=Msa1265280-mRNA-1
chr8_2 exon 69468974 69469098 69468974 ID=Msa1265280-mRNA-1:exon:22930;Parent=Msa1265280-mRNA-1
chr8_2 exon 69469913 69469988 69469913 ID=Msa1265280-mRNA-1:exon:22931;Parent=Msa1265280-mRNA-1
chr8_2 exon 69470521 69470579 69470521 ID=Msa1265280-mRNA-1:exon:22932;Parent=Msa1265280-mRNA-1
chr8_2 exon 69471550 69472043 69471550 ID=Msa1265280-mRNA-1:exon:22933;Parent=Msa1265280-mRNA-1
chr8_2 exon 69472143 69472303 69472143 ID=Msa1265280-mRNA-1:exon:22934;Parent=Msa1265280-mRNA-1
chr8_2 exon 69472379 69472582 69472379 ID=Msa1265280-mRNA-1:exon:22935;Parent=Msa1265280-mRNA-1
chr8_2 exon 69472842 69472992 69472842 ID=Msa1265280-mRNA-1:exon:22936;Parent=Msa1265280-mRNA-1
chr8_2 exon 69473715 69474729 69473715 ID=Msa1265280-mRNA-1:exon:22937;Parent=Msa1265280-mRNA-1
chr8_2 five_prime_UTR 69468304 69468740 69468304 ID=Msa1265280-mRNA-1:five_prime_utr;Parent=Msa1265280-mRNA-1
chr8_2 five_prime_UTR 69468974 69468997 69468974 ID=Msa1265280-mRNA-1:five_prime_utr;Parent=Msa1265280-mRNA-1
chr8_2 CDS 69468998 69469098 69468998 ID=Msa1265280-mRNA-1:cds;Parent=Msa1265280-mRNA-1
chr8_2 CDS 69469913 69469988 69469913 ID=Msa1265280-mRNA-1:cds;Parent=Msa1265280-mRNA-1
chr8_2 CDS 69470521 69470579 69470521 ID=Msa1265280-mRNA-1:cds;Parent=Msa1265280-mRNA-1
chr8_2 CDS 69471550 69472043 69471550 ID=Msa1265280-mRNA-1:cds;Parent=Msa1265280-mRNA-1
chr8_2 CDS 69472143 69472303 69472143 ID=Msa1265280-mRNA-1:cds;Parent=Msa1265280-mRNA-1
chr8_2 CDS 69472379 69472582 69472379 ID=Msa1265280-mRNA-1:cds;Parent=Msa1265280-mRNA-1
chr8_2 CDS 69472842 69472992 69472842 ID=Msa1265280-mRNA-1:cds;Parent=Msa1265280-mRNA-1
chr8_2 CDS 69473715 69474292 69473715 ID=Msa1265280-mRNA-1:cds;Parent=Msa1265280-mRNA-1
chr8_2 three_prime_UTR 69474293 69474729 69474293 ID=Msa1265280-mRNA-1:three_prime_utr;Parent=Msa1265280-mRNA-1
Gene Sequence

>Msa1265280

ATGCAGAGACCACCTACCGACGGAGCAAGTATGGGGAAAAGGGCCCTTGAGGGTGGTGGAGATGATGATCAGCCTGAACGAAAGAGGCCTGCTCTTGCTAGTGTAATTGTTGAAGCTCTCAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAACCTATTCTTCGTAGAGTTGTGAGTGAAGAAGTGGAGCGTGCTTTGGCGAAGTTAGGTCCTGCAAGACTTAGTGGAAGGTCTTCCCCTAAAAGGATTGAAGGTCCTGATGGTAGAAACTTGCGGCTTCAATTTAGGTCCCGACTGGCTCTTCCTCTATTCACAGGAGGAAAAGTGGAAGGCGAGCAGGGGGCTCCAATTCATGTTGTTCTGGTTGATTCCAACAGTGGAAGTGTGGTAACATCTGGACCTGAATCATGTATAAAACTCGATGTCGTTGTCCTTGAAGGCGATTTTAACAATGAAGATGATGAAGATTGGAGCCAAGAGGAATTTGAAAGCCATGTGGTGAAAGAACGCCAAGGAAAGAGACCTTTGTTGAACGGGGAACTGCAAGTGACACTCAAGGAGGGAGTTGGAACATTAGGGGAACTGATATTTACAGACAATTCAAGCTGGATAAGAAGCCGTAAATTCAGGCTTGGAATGAAGGTTGCATCTGGTTTTGGCGAGTCTATACGCATTCGTGAAGCCAAGACAGTGGCTTTTACTGTTAAAGATCATAGAGGAGAATTGTATAAGAAGCATTATCCTCCTGCATTGGGTGATGATGTATGGAGATTGGAGAAAATAGGTAAGGATGGGTCATTTCACAAAAAGTTGAATAATGCTGGAATATTCACCGTTGAAGACTTTCTTCGACTTGTGGTTAAGGATCAACAGAAATTGCGGAATATCCTTGGGAGCGGTATGTCAAACAAGATGTGGGAAGCTCTCTTAGACCATGCAAAGACATGTGTTCTAAGCGGGAAGCTTTATGTTTATTATCCAGAAGATACAAGAAATGTTGGTGTTATTTTTAACCACGTCTATGAGCTGCGTGGCCTTATAACAGGAGAGCAATTCTTTTCTGCTGATTCTCTTAGCGATAATCAGAAGGTGTACGTAGATTCATTGGTGAAAAAGGCATACGACAATTGGGAGCAGGTTGTAGAGTACGATGGCAAATCACTTGTGGATGCTGAGCAAAATAACAACACTGTTGAATCTGAAAATGAACTTCATGTGGAGTCAATTGATTATGATGGCGGTTTTAACAATAGCATGGTGACGAGGTATCCAAGCCAGGCCTTGATTGGAAATTCCAGCTCTCGGAGTCATTTTGATGACTCGTTATATCTGTCTAACGACCATTTATTAGGCAATGCTCACCAATCCCAAAGCTCTAGAAATGATCATAGCACAGTAGGGTTGGCTCTTGGTCCTTCTCAATCATCAACTTCAGGTTTCCATGCTGCTAGCTCTTCCATGCAACCACCTGCCCCAAATCCTTTTGATGATTGGTCAAACAACAGGGACAAGGGTGTTGATGACTTCTTTTCAGAGGATGAAATCCGCGTTAGAAGTAATGAGATACTAGAGAATGAAGACATGCAGCACTTGCTTCGCCTTTTCAGCATGGGAGGTCATCCTTCCATGAATACTGAGGATGGTTATTCATTCCCATCATTCATGCCATCTCCTATGCCGAACTTCGATGAGGATCGCTCTCGTCCTGGCAAAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATCAGAAAGATAGCAGCTGAGAAGCGGGCTCAGATAGAGGAGTTAGATGAATAG
Protein sequence

>Msa1265280

MQRPPTDGASMGKRALEGGGDDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLSGRSSPKRIEGPDGRNLRLQFRSRLALPLFTGGKVEGEQGAPIHVVLVDSNSGSVVTSGPESCIKLDVVVLEGDFNNEDDEDWSQEEFESHVVKERQGKRPLLNGELQVTLKEGVGTLGELIFTDNSSWIRSRKFRLGMKVASGFGESIRIREAKTVAFTVKDHRGELYKKHYPPALGDDVWRLEKIGKDGSFHKKLNNAGIFTVEDFLRLVVKDQQKLRNILGSGMSNKMWEALLDHAKTCVLSGKLYVYYPEDTRNVGVIFNHVYELRGLITGEQFFSADSLSDNQKVYVDSLVKKAYDNWEQVVEYDGKSLVDAEQNNNTVESENELHVESIDYDGGFNNSMVTRYPSQALIGNSSSRSHFDDSLYLSNDHLLGNAHQSQSSRNDHSTVGLALGPSQSSTSGFHAASSSMQPPAPNPFDDWSNNRDKGVDDFFSEDEIRVRSNEILENEDMQHLLRLFSMGGHPSMNTEDGYSFPSFMPSPMPNFDEDRSRPGKAVVGWLKIKAAMRWGFFIRKIAAEKRAQIEELDE*