AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0147600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0147600 MtrunA17_Chr1g0156931 97.230 361 10 0 1 361 1 361 0.0 721
Msa0147600 MtrunA17_Chr3g0142941 71.513 337 95 1 25 360 31 367 0.0 518
Msa0147600 MtrunA17_Chr1g0156891 63.836 365 128 3 1 361 1 365 4.31e-176 493
Msa0147600 MtrunA17_Chr1g0156911 62.817 355 131 1 8 361 4 358 1.07e-175 492
Msa0147600 MtrunA17_Chr3g0142921 65.084 358 120 3 9 361 1 358 4.25e-175 491
Msa0147600 MtrunA17_Chr1g0156901 61.732 358 136 1 4 360 13 370 3.77e-174 489
Msa0147600 MtrunA17_Chr1g0156921 57.386 352 148 2 12 361 13 364 6.63e-158 447
Msa0147600 MtrunA17_Chr8g0371491 57.798 327 136 2 31 355 26 352 5.07e-139 399
Msa0147600 MtrunA17_Chr5g0405821 55.493 355 151 6 4 354 9 360 8.14e-137 394
Msa0147600 MtrunA17_Chr5g0405831 53.390 354 159 4 4 354 9 359 9.25e-133 384
Msa0147600 MtrunA17_Chr8g0371471 52.722 349 160 4 17 361 16 363 3.15e-129 374
Msa0147600 MtrunA17_Chr8g0371481 52.000 350 162 4 17 361 16 364 1.44e-128 373
Msa0147600 MtrunA17_Chr8g0341001 44.152 342 182 5 17 353 10 347 3.65e-99 298
Msa0147600 MtrunA17_Chr5g0438621 44.984 309 164 3 39 343 28 334 3.85e-96 290
Msa0147600 MtrunA17_Chr2g0283191 41.026 351 194 6 9 348 8 356 5.83e-96 290
Msa0147600 MtrunA17_Chr4g0046151 42.902 317 172 3 41 348 36 352 1.19e-95 289
Msa0147600 MtrunA17_Chr1g0157001 42.609 345 194 3 14 356 9 351 1.23e-95 289
Msa0147600 MtrunA17_Chr5g0438631 43.827 324 177 4 39 358 26 348 2.57e-95 288
Msa0147600 MtrunA17_Chr2g0330781 44.479 326 178 3 36 358 26 351 9.13e-95 286
Msa0147600 MtrunA17_Chr5g0432101 42.735 351 190 6 12 354 2 349 2.23e-93 283
Msa0147600 MtrunA17_Chr3g0120861 42.202 327 183 4 39 361 36 360 5.76e-93 282
Msa0147600 MtrunA17_Chr3g0105401 41.104 326 189 3 39 361 26 351 2.78e-92 280
Msa0147600 MtrunA17_Chr5g0438641 40.857 350 203 3 14 361 7 354 4.29e-91 277
Msa0147600 MtrunA17_Chr2g0320671 39.769 347 201 3 9 353 4 344 5.41e-91 276
Msa0147600 MtrunA17_Chr5g0437421 39.264 326 191 2 39 357 30 355 3.49e-85 262
Msa0147600 MtrunA17_Chr4g0027521 37.231 325 189 4 39 353 25 344 2.40e-68 218
Msa0147600 MtrunA17_Chr8g0374101 36.364 330 198 6 41 358 37 366 3.88e-65 211
Msa0147600 MtrunA17_Chr2g0285061 35.161 310 191 6 39 342 30 335 4.87e-65 210
Msa0147600 MtrunA17_Chr8g0380041 35.045 331 205 6 18 342 7 333 3.23e-63 206
Msa0147600 MtrunA17_Chr3g0086641 34.603 315 199 5 32 342 29 340 3.43e-63 206
Msa0147600 MtrunA17_Chr3g0077571 36.893 309 184 7 38 342 27 328 5.69e-63 204
Msa0147600 MtrunA17_Chr7g0275011 35.826 321 194 6 41 354 34 349 7.83e-62 202
Msa0147600 MtrunA17_Chr7g0275021 35.168 327 199 8 41 358 34 356 1.99e-61 201
Msa0147600 MtrunA17_Chr4g0017431 32.934 334 216 5 16 344 6 336 2.48e-61 201
Msa0147600 MtrunA17_Chr1g0182811 34.161 322 200 6 41 354 33 350 3.49e-61 201
Msa0147600 MtrunA17_Chr4g0008851 34.796 319 200 6 41 353 32 348 7.66e-61 199
Msa0147600 MtrunA17_Chr1g0189901 33.123 317 206 5 41 353 31 345 2.81e-59 195
Msa0147600 MtrunA17_Chr7g0275001 33.429 350 220 6 9 354 1 341 9.76e-59 194
Msa0147600 MtrunA17_Chr2g0294301 35.000 320 199 6 31 344 25 341 9.94e-59 194
Msa0147600 MtrunA17_Chr3g0077581 32.659 346 214 9 13 344 4 344 1.38e-58 194
Msa0147600 MtrunA17_Chr7g0274991 33.742 326 204 6 35 353 27 347 1.76e-58 193
Msa0147600 MtrunA17_Chr3g0099161 34.561 353 220 5 7 352 59 407 1.20e-57 193
Msa0147600 MtrunA17_Chr5g0396511 34.219 301 192 4 46 342 51 349 1.77e-57 191
Msa0147600 MtrunA17_Chr1g0189891 34.591 318 195 6 41 353 29 338 2.27e-57 190
Msa0147600 MtrunA17_Chr6g0457921 35.826 321 189 9 43 353 31 344 5.07e-57 189
Msa0147600 MtrunA17_Chr3g0131321 32.853 347 221 7 13 351 6 348 1.83e-56 189
Msa0147600 MtrunA17_Chr1g0189931 34.069 317 203 5 41 353 32 346 3.55e-56 187
Msa0147600 MtrunA17_Chr4g0068441 36.646 322 193 7 30 344 24 341 5.61e-56 187
Msa0147600 MtrunA17_Chr2g0294311 34.493 345 203 7 14 344 11 346 1.14e-55 186
Msa0147600 MtrunA17_Chr3g0099151 34.734 357 220 7 5 352 51 403 2.36e-55 187
Msa0147600 MtrunA17_Chr5g0434621 32.759 348 217 9 19 361 6 341 4.44e-54 181
Msa0147600 MtrunA17_Chr3g0092131 32.492 317 206 6 45 356 27 340 8.96e-54 181
Msa0147600 MtrunA17_Chr7g0215961 32.110 327 194 7 41 357 33 341 6.96e-53 178
Msa0147600 MtrunA17_Chr6g0463261 68.595 121 37 1 94 213 4 124 1.31e-52 170
Msa0147600 MtrunA17_Chr4g0060811 31.861 317 208 6 45 356 31 344 3.64e-52 177
Msa0147600 MtrunA17_Chr3g0099231 33.618 351 214 8 9 352 4 342 4.19e-51 174
Msa0147600 MtrunA17_Chr5g0444401 31.790 324 209 5 39 354 26 345 1.28e-47 165
Msa0147600 MtrunA17_Chr2g0284921 32.051 312 191 8 39 342 32 330 2.42e-47 164
Msa0147600 MtrunA17_Chr4g0027571 38.498 213 127 3 144 353 3 214 8.26e-47 159
Msa0147600 MtrunA17_Chr8g0344941 33.123 317 199 7 41 349 41 352 2.11e-46 162
Msa0147600 MtrunA17_Chr8g0380031 31.118 331 206 8 17 342 63 376 6.87e-45 159
Msa0147600 MtrunA17_Chr8g0344931 32.416 327 194 9 41 361 37 342 1.95e-44 156
Msa0147600 MtrunA17_Chr8g0349341 32.456 342 207 11 18 346 10 340 2.27e-44 156
Msa0147600 MtrunA17_Chr2g0301641 31.755 359 221 9 14 358 16 364 3.33e-44 157
Msa0147600 MtrunA17_Chr3g0085881 31.511 311 192 9 39 344 31 325 5.43e-44 155
Msa0147600 MtrunA17_Chr5g0420811 33.623 345 202 12 9 344 1 327 1.13e-43 154
Msa0147600 MtrunA17_Chr2g0284991 32.143 336 208 10 13 342 8 329 3.56e-43 154
Msa0147600 MtrunA17_Chr8g0349321 31.161 353 220 11 4 346 1 340 6.58e-42 150
Msa0147600 MtrunA17_Chr2g0284951 33.123 317 181 11 39 344 31 327 1.52e-40 146
Msa0147600 MtrunA17_Chr7g0229591 40.000 210 113 4 6 213 5 203 1.13e-38 137
Msa0147600 MtrunA17_Chr7g0229581 44.595 148 81 1 214 360 7 154 5.10e-38 134
Msa0147600 MtrunA17_Chr2g0285001 31.132 318 200 12 39 349 31 336 9.37e-36 134
Msa0147600 MtrunA17_Chr8g0349301 30.769 312 187 11 12 311 5 299 2.68e-35 131
Msa0147600 MtrunA17_Chr8g0370981 28.075 374 196 10 40 354 43 402 4.15e-35 133
Msa0147600 MtrunA17_Chr8g0370951 29.513 349 220 11 9 344 6 341 3.65e-34 129
Msa0147600 MtrunA17_Chr1g0160011 29.863 365 217 14 14 352 15 366 1.58e-33 128
Msa0147600 MtrunA17_Chr8g0349331 28.152 341 191 9 18 346 10 308 3.53e-33 125
Msa0147600 MtrunA17_Chr2g0284941 30.032 313 181 9 39 345 31 311 6.06e-33 125
Msa0147600 MtrunA17_Chr3g0085231 29.882 338 203 11 13 342 11 322 1.18e-32 125
Msa0147600 MtrunA17_Chr1g0160031 28.986 345 206 13 36 353 34 366 1.65e-31 122
Msa0147600 MtrunA17_Chr6g0469511 51.786 112 54 0 39 150 28 139 4.19e-31 115
Msa0147600 MtrunA17_Chr2g0301581 29.863 365 211 14 10 354 6 345 7.72e-31 120
Msa0147600 MtrunA17_Chr3g0104821 27.941 340 208 13 41 354 44 372 8.97e-31 120
Msa0147600 MtrunA17_Chr2g0283481 29.499 339 201 12 41 353 47 373 9.08e-31 120
Msa0147600 MtrunA17_Chr7g0254461 26.816 358 205 12 40 358 42 381 2.42e-30 119
Msa0147600 MtrunA17_Chr0c01g0489581 27.348 362 226 12 9 354 3 343 9.14e-30 117
Msa0147600 MtrunA17_Chr2g0317271 27.500 360 224 12 11 354 5 343 1.69e-29 116
Msa0147600 MtrunA17_Chr2g0301541 30.240 334 191 13 41 354 34 345 4.13e-29 115
Msa0147600 MtrunA17_Chr2g0317261 27.298 359 226 11 11 354 5 343 4.38e-29 115
Msa0147600 MtrunA17_Chr0c01g0489571 27.348 362 226 12 9 354 3 343 4.47e-29 115
Msa0147600 MtrunA17_Chr8g0381581 26.136 352 222 10 36 358 35 377 1.74e-28 114
Msa0147600 MtrunA17_Chr1g0159991 28.116 345 209 12 36 352 31 364 5.50e-28 112
Msa0147600 MtrunA17_Chr2g0283511 29.341 334 202 14 46 354 36 360 8.15e-28 112
Msa0147600 MtrunA17_Chr1g0191461 26.158 367 234 12 18 359 12 366 1.15e-27 111
Msa0147600 MtrunA17_Chr7g0273101 28.205 351 204 16 36 353 24 359 1.97e-27 111
Msa0147600 MtrunA17_Chr3g0112821 27.410 332 212 11 41 354 30 350 2.64e-27 110
Msa0147600 MtrunA17_Chr1g0160101 27.202 386 221 17 4 352 9 371 2.94e-27 110
Msa0147600 MtrunA17_Chr4g0018571 38.217 157 96 1 203 358 19 175 3.75e-27 105
Msa0147600 MtrunA17_Chr6g0469521 42.149 121 69 1 215 334 32 152 8.79e-27 103
Msa0147600 MtrunA17_Chr6g0450731 26.630 368 235 14 9 358 1 351 1.40e-26 108
Msa0147600 MtrunA17_Chr4g0027561 47.244 127 57 2 6 132 5 121 2.17e-26 102
Msa0147600 MtrunA17_Chr1g0159981 28.161 348 197 14 40 352 45 374 2.35e-26 108
Msa0147600 MtrunA17_Chr2g0283501 28.190 337 211 13 41 354 31 359 1.06e-25 106
Msa0147600 MtrunA17_Chr6g0450721 27.424 361 231 13 14 359 6 350 1.22e-25 105
Msa0147600 MtrunA17_Chr3g0093031 27.463 335 213 13 41 354 30 355 4.56e-25 104
Msa0147600 MtrunA17_Chr1g0159971 27.666 347 198 12 41 352 47 375 7.60e-25 104
Msa0147600 MtrunA17_Chr7g0271551 28.144 334 204 14 40 354 34 350 8.77e-25 103
Msa0147600 MtrunA17_Chr8g0370961 26.415 212 150 4 135 344 11 218 9.10e-25 101
Msa0147600 MtrunA17_Chr7g0226911 26.835 395 217 17 13 358 3 374 4.92e-24 102
Msa0147600 MtrunA17_Chr7g0226941 27.019 359 222 12 24 353 16 363 6.53e-24 101
Msa0147600 MtrunA17_Chr8g0352901 25.067 371 238 10 9 353 1 357 1.39e-23 100
Msa0147600 MtrunA17_Chr6g0450701 26.684 386 219 16 9 353 1 363 1.40e-23 100
Msa0147600 MtrunA17_Chr1g0198351 26.446 363 228 14 14 361 13 351 1.68e-23 100
Msa0147600 MtrunA17_Chr6g0450711 26.801 347 202 14 40 354 121 447 6.59e-23 99.4
Msa0147600 MtrunA17_Chr7g0275291 26.822 343 206 13 41 353 33 360 1.09e-22 97.8
Msa0147600 MtrunA17_Chr4g0057991 25.485 361 231 14 17 354 16 361 1.38e-22 97.8
Msa0147600 MtrunA17_Chr2g0301551 29.825 285 161 11 90 354 36 301 1.46e-22 96.7
Msa0147600 MtrunA17_Chr3g0112691 27.746 346 196 16 41 354 30 353 3.05e-22 96.7
Msa0147600 MtrunA17_Chr4g0027581 35.374 147 72 2 230 353 41 187 3.21e-22 93.2
Msa0147600 MtrunA17_Chr1g0178931 24.316 329 221 12 42 361 38 347 1.20e-21 94.7
Msa0147600 MtrunA17_Chr7g0226931 26.575 365 207 15 41 358 38 388 1.83e-21 94.7
Msa0147600 MtrunA17_Chr6g0455661 32.240 183 115 5 168 345 269 447 4.07e-21 94.4
Msa0147600 MtrunA17_Chr6g0455661 40.972 144 73 6 19 155 6 144 3.12e-18 85.9
Msa0147600 MtrunA17_Chr6g0459921 32.240 183 115 5 168 345 158 336 5.41e-21 92.8
Msa0147600 MtrunA17_Chr2g0301571 29.123 285 163 12 90 354 36 301 9.95e-21 91.7
Msa0147600 MtrunA17_Chr5g0440501 27.803 223 145 4 141 351 11 229 1.45e-20 89.7
Msa0147600 MtrunA17_Chr3g0096551 25.459 381 228 15 15 354 1 366 2.10e-20 91.7
Msa0147600 MtrunA17_Chr7g0266061 25.231 325 212 13 39 352 40 344 3.07e-20 90.5
Msa0147600 MtrunA17_Chr2g0283531 24.931 361 244 13 14 354 5 358 3.82e-20 90.5
Msa0147600 MtrunA17_Chr1g0178941 24.189 339 217 12 42 361 41 358 7.41e-20 89.7
Msa0147600 MtrunA17_Chr8g0347751 25.989 354 209 13 41 358 36 372 7.81e-20 89.7
Msa0147600 MtrunA17_Chr8g0339251 25.513 341 220 12 9 333 1 323 1.52e-19 88.2
Msa0147600 MtrunA17_Chr2g0321991 48.889 90 44 2 39 127 31 119 3.29e-18 80.1
Msa0147600 MtrunA17_Chr1g0189921 47.126 87 45 1 41 127 31 116 3.80e-18 80.5
Msa0147600 MtrunA17_Chr3g0104831 25.461 271 169 10 109 354 29 291 1.63e-17 82.0
Msa0147600 MtrunA17_Chr2g0301591 29.730 296 157 13 10 285 6 270 7.72e-17 79.7
Msa0147600 MtrunA17_Chr1g0198381 24.169 331 210 12 42 355 3 309 3.23e-16 78.6
Msa0147600 MtrunA17_Chr5g0432081 50.794 63 30 1 292 354 3 64 1.47e-15 71.2
Msa0147600 MtrunA17_Chr4g0018561 49.367 79 32 2 14 90 7 79 6.40e-14 67.0
Msa0147600 MtrunA17_Chr8g0370971 39.423 104 59 1 40 139 37 140 3.33e-13 67.0
Msa0147600 MtrunA17_Chr1g0189911 28.800 125 87 2 230 353 5 128 4.35e-13 66.2
Msa0147600 MtrunA17_Chr7g0228261 40.909 66 39 0 289 354 10 75 5.63e-13 64.3
Msa0147600 MtrunA17_Chr2g0308201 46.341 82 35 2 13 94 15 87 1.28e-12 63.2
Msa0147600 MtrunA17_Chr3g0104801 33.099 142 82 5 41 175 44 179 1.51e-12 65.5
Msa0147600 MtrunA17_Chr2g0301561 28.947 228 135 9 90 299 36 254 5.94e-12 65.1
Msa0147600 MtrunA17_Chr2g0283541 26.633 199 123 7 172 354 93 284 5.34e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0147600 AT1G75900.1 60.807 347 133 2 18 361 18 364 8.17e-159 450
Msa0147600 AT1G75880.2 56.303 357 154 2 6 360 17 373 1.18e-145 417
Msa0147600 AT1G75880.1 56.145 358 154 3 6 360 17 374 8.90e-144 412
Msa0147600 AT1G75890.2 52.925 359 166 3 2 357 8 366 3.92e-141 405
Msa0147600 AT1G75890.3 52.925 359 166 3 2 357 37 395 5.43e-141 406
Msa0147600 AT5G42170.1 56.418 335 143 2 28 361 37 369 3.78e-140 403
Msa0147600 AT1G75890.1 51.075 372 166 4 2 357 8 379 1.30e-137 397
Msa0147600 AT3G14820.1 52.326 344 160 3 14 356 5 345 7.97e-127 368
Msa0147600 AT1G59406.1 54.128 327 145 4 36 360 25 348 1.99e-126 367
Msa0147600 AT1G59030.1 54.128 327 145 4 36 360 25 348 1.99e-126 367
Msa0147600 AT1G58725.1 54.128 327 145 4 36 360 25 348 1.99e-126 367
Msa0147600 AT1G20120.1 54.206 321 145 2 36 354 73 393 4.76e-125 365
Msa0147600 AT1G20132.1 53.517 327 150 2 36 360 56 382 1.19e-121 356
Msa0147600 AT1G58520.3 51.807 332 148 5 31 360 20 341 3.84e-117 343
Msa0147600 AT1G58525.1 51.807 332 148 5 31 360 20 341 3.84e-117 343
Msa0147600 AT3G43570.1 49.547 331 135 4 31 360 20 319 3.34e-114 335
Msa0147600 AT2G04570.1 43.235 340 183 4 30 361 13 350 3.17e-99 298
Msa0147600 AT1G20130.2 45.401 337 169 4 36 360 179 512 1.67e-96 296
Msa0147600 AT1G20130.1 45.401 337 169 4 36 360 199 532 4.84e-96 296
Msa0147600 AT3G43550.1 52.963 270 123 3 31 299 20 286 1.67e-95 286
Msa0147600 AT5G63170.1 48.710 310 143 5 39 345 26 322 2.59e-95 287
Msa0147600 AT5G03810.1 45.768 319 168 4 39 353 28 345 3.15e-95 288
Msa0147600 AT1G73610.1 43.902 328 167 5 36 360 30 343 1.34e-93 283
Msa0147600 AT5G45960.1 42.857 329 182 3 38 360 44 372 7.46e-93 282
Msa0147600 AT3G16370.1 43.385 325 181 3 39 360 28 352 2.20e-92 280
Msa0147600 AT1G06990.1 41.975 324 185 2 40 360 36 359 2.68e-92 280
Msa0147600 AT5G22810.1 40.805 348 201 3 11 353 4 351 5.26e-92 280
Msa0147600 AT2G30310.1 44.000 325 175 5 40 357 33 357 3.14e-91 278
Msa0147600 AT2G40250.1 42.683 328 180 3 35 355 30 356 2.13e-90 276
Msa0147600 AT2G31540.1 42.486 346 192 5 4 345 1 343 1.99e-89 273
Msa0147600 AT5G03820.1 44.201 319 174 3 39 353 31 349 4.86e-89 272
Msa0147600 AT4G26790.1 40.841 333 194 3 31 360 18 350 1.10e-88 271
Msa0147600 AT4G26790.2 40.841 333 194 3 31 360 18 350 1.10e-88 271
Msa0147600 AT5G03820.2 44.201 319 174 3 39 353 59 377 1.30e-88 272
Msa0147600 AT2G30220.1 44.000 325 175 5 40 357 32 356 1.94e-88 271
Msa0147600 AT2G42990.1 41.745 321 181 3 39 355 26 344 3.06e-88 270
Msa0147600 AT1G23500.1 44.860 321 163 4 36 354 30 338 2.70e-86 265
Msa0147600 AT1G58430.1 43.871 310 170 3 40 345 34 343 2.78e-86 265
Msa0147600 AT2G24560.1 40.503 358 205 6 9 358 1 358 1.81e-85 263
Msa0147600 AT3G53100.1 39.710 345 197 4 18 358 11 348 4.82e-84 259
Msa0147600 AT1G20135.1 40.127 314 174 5 38 349 26 327 4.16e-79 246
Msa0147600 AT1G75920.2 40.683 322 179 4 36 354 24 336 1.73e-78 244
Msa0147600 AT5G45950.1 37.538 333 198 6 30 357 29 356 9.75e-75 235
Msa0147600 AT1G75920.1 38.872 337 179 5 36 354 19 346 1.93e-74 234
Msa0147600 AT1G75910.1 39.009 323 184 5 36 354 23 336 3.02e-71 226
Msa0147600 AT3G50400.1 35.043 351 218 6 13 353 6 356 4.32e-66 214
Msa0147600 AT4G28780.1 32.948 346 227 4 11 353 2 345 5.78e-66 213
Msa0147600 AT1G29670.1 35.777 341 203 11 12 344 3 335 5.02e-65 211
Msa0147600 AT1G75920.4 38.567 293 168 4 65 354 25 308 5.64e-65 209
Msa0147600 AT5G08460.1 33.524 349 221 5 1 342 12 356 1.13e-64 210
Msa0147600 AT1G29670.2 35.777 341 203 11 12 344 71 403 3.35e-64 210
Msa0147600 AT5G45670.1 35.897 312 190 6 39 344 27 334 4.94e-64 208
Msa0147600 AT4G18970.1 36.538 312 188 6 39 344 26 333 2.22e-63 206
Msa0147600 AT4G18970.2 36.538 312 188 6 39 344 26 333 7.89e-63 206
Msa0147600 AT5G33370.1 35.671 328 199 6 33 353 22 344 1.86e-62 204
Msa0147600 AT2G24560.2 39.865 296 173 5 9 299 1 296 4.38e-62 201
Msa0147600 AT2G23540.1 33.708 356 218 7 5 344 7 360 4.92e-62 203
Msa0147600 AT1G75920.3 34.557 327 171 5 31 354 19 305 7.39e-61 198
Msa0147600 AT1G71691.2 36.218 312 183 8 39 343 53 355 1.41e-60 199
Msa0147600 AT1G33811.1 33.143 350 207 11 14 344 3 344 1.92e-60 199
Msa0147600 AT1G75930.1 38.994 318 174 8 36 346 24 328 2.44e-60 198
Msa0147600 AT5G55050.1 37.386 329 189 8 37 353 35 358 2.75e-60 199
Msa0147600 AT4G10950.2 33.754 317 206 3 39 352 69 384 5.80e-60 199
Msa0147600 AT1G71250.1 35.514 321 196 5 39 355 39 352 7.68e-60 197
Msa0147600 AT1G29660.1 33.033 333 208 7 17 344 14 336 4.89e-58 192
Msa0147600 AT5G18430.1 33.618 351 220 7 9 353 1 344 5.75e-58 192
Msa0147600 AT5G15720.1 35.185 324 200 7 39 355 28 348 7.82e-58 192
Msa0147600 AT5G41890.1 35.347 331 186 7 45 354 35 358 1.02e-57 192
Msa0147600 AT3G04290.1 32.312 359 220 7 2 353 1 343 4.11e-57 190
Msa0147600 AT4G10950.1 32.808 317 205 3 39 352 69 380 2.13e-56 189
Msa0147600 AT1G74460.1 32.492 317 206 6 45 356 27 340 1.03e-53 181
Msa0147600 AT5G37690.1 31.385 325 213 7 34 353 20 339 1.87e-53 180
Msa0147600 AT2G31550.1 42.574 202 113 3 147 345 1 202 6.55e-52 172
Msa0147600 AT5G37690.2 30.769 325 207 8 34 353 20 331 1.03e-48 167
Msa0147600 AT1G53920.1 31.161 353 228 8 10 352 14 361 1.22e-48 168
Msa0147600 AT1G71120.1 33.746 323 199 8 38 354 28 341 1.21e-47 165
Msa0147600 AT5G33370.2 35.766 274 164 6 33 299 22 290 4.37e-46 160
Msa0147600 AT2G19010.1 32.692 312 184 11 39 342 28 321 4.16e-45 158
Msa0147600 AT2G19010.2 32.692 312 184 11 39 342 58 351 5.02e-45 159
Msa0147600 AT2G03980.2 33.832 334 198 11 40 361 42 364 2.85e-44 156
Msa0147600 AT2G03980.3 33.832 334 198 11 40 361 42 364 2.85e-44 156
Msa0147600 AT2G03980.1 33.832 334 198 11 40 361 42 364 2.85e-44 156
Msa0147600 AT2G03980.4 33.832 334 198 11 40 361 42 364 2.85e-44 156
Msa0147600 AT2G19060.1 32.198 323 195 11 39 353 28 334 3.80e-44 155
Msa0147600 AT2G19050.1 31.746 315 187 11 39 344 29 324 1.35e-43 154
Msa0147600 AT1G71691.3 35.075 268 158 8 39 299 53 311 4.12e-41 147
Msa0147600 AT5G15720.2 34.701 268 165 7 39 299 28 292 1.06e-38 140
Msa0147600 AT3G14225.2 29.231 325 206 8 41 350 37 352 1.08e-38 142
Msa0147600 AT1G71691.1 32.129 249 155 6 102 343 13 254 2.69e-38 138
Msa0147600 AT3G14225.1 28.875 329 206 8 41 350 37 356 3.66e-38 140
Msa0147600 AT4G30140.1 32.581 310 185 12 39 342 31 322 5.35e-38 139
Msa0147600 AT4G16230.1 38.095 231 132 5 13 238 6 230 3.10e-37 135
Msa0147600 AT5G40990.1 28.972 321 212 8 41 350 37 352 3.88e-37 137
Msa0147600 AT1G53940.2 29.283 321 211 8 41 350 39 354 2.28e-36 135
Msa0147600 AT5G15720.3 30.651 261 174 5 102 355 57 317 1.02e-35 133
Msa0147600 AT2G19050.2 31.890 254 155 8 39 286 29 270 1.79e-34 128
Msa0147600 AT3G05180.1 28.739 341 207 10 40 353 35 366 2.30e-33 127
Msa0147600 AT1G28610.2 30.588 340 198 13 41 354 31 358 2.15e-32 125
Msa0147600 AT1G53990.1 27.187 320 212 8 41 350 35 343 9.28e-32 123
Msa0147600 AT2G04020.1 38.164 207 106 7 40 236 42 236 2.77e-31 119
Msa0147600 AT1G54790.3 26.842 380 226 15 7 353 2 362 2.92e-31 122
Msa0147600 AT2G04020.2 38.164 207 106 7 40 236 42 236 1.36e-30 119
Msa0147600 AT2G27360.1 30.383 339 200 12 41 353 33 361 3.22e-29 117
Msa0147600 AT1G31550.2 28.614 339 206 14 41 354 36 363 1.80e-28 114
Msa0147600 AT1G28600.1 29.586 338 202 14 41 353 31 357 2.08e-28 114
Msa0147600 AT1G28580.1 29.651 344 195 16 41 353 37 364 2.62e-28 114
Msa0147600 AT1G28640.1 29.204 339 203 15 41 353 35 362 3.93e-28 113
Msa0147600 AT1G28590.1 28.529 340 206 13 41 354 36 364 5.29e-28 113
Msa0147600 AT1G28670.1 29.674 337 205 14 41 353 35 363 9.49e-28 112
Msa0147600 AT1G54000.1 27.619 315 207 6 36 344 31 330 2.01e-27 111
Msa0147600 AT1G28650.1 29.211 380 230 19 4 356 1 368 5.62e-27 110
Msa0147600 AT1G54010.1 28.391 317 198 9 39 344 32 330 1.73e-26 108
Msa0147600 AT1G54030.1 27.832 309 192 10 42 344 53 336 2.12e-26 109
Msa0147600 AT3G26430.1 27.807 374 208 14 9 342 1 352 3.34e-26 108
Msa0147600 AT5G14450.1 27.249 378 231 14 10 358 14 376 6.28e-26 107
Msa0147600 AT1G28570.1 28.297 364 222 14 17 354 12 362 6.86e-26 107
Msa0147600 AT1G28660.1 28.783 337 207 14 41 353 35 362 8.07e-26 107
Msa0147600 AT1G54790.1 26.361 349 205 15 40 353 30 361 8.54e-26 107
Msa0147600 AT1G31550.1 27.434 339 207 14 41 354 36 360 3.65e-25 105
Msa0147600 AT3G48460.1 26.702 382 231 17 7 359 6 367 4.10e-25 105
Msa0147600 AT1G54020.2 27.070 314 203 10 38 344 28 322 5.44e-25 104
Msa0147600 AT5G03610.1 25.749 334 214 12 42 361 44 357 5.48e-25 104
Msa0147600 AT1G53940.1 28.947 266 181 6 41 302 39 300 1.14e-24 102
Msa0147600 AT1G09390.1 28.852 357 222 13 5 344 3 344 1.60e-24 103
Msa0147600 AT1G56670.1 27.193 342 209 13 40 359 39 362 1.73e-24 103
Msa0147600 AT1G28660.2 28.783 337 206 15 41 353 35 361 1.79e-24 103
Msa0147600 AT3G62280.1 27.746 346 195 16 40 356 35 354 4.45e-23 99.4
Msa0147600 AT3G09930.2 26.686 341 214 12 30 357 32 349 4.46e-23 99.0
Msa0147600 AT3G09930.1 26.686 341 214 12 30 357 32 349 4.46e-23 99.0
Msa0147600 AT4G01130.1 25.789 380 221 14 17 358 14 370 7.99e-23 99.0
Msa0147600 AT5G45910.1 28.415 366 225 16 17 354 7 363 1.90e-22 97.4
Msa0147600 AT1G67830.1 24.642 349 211 13 40 352 29 361 1.70e-21 94.7
Msa0147600 AT5G03600.1 26.730 318 203 12 39 348 12 307 2.54e-21 93.6
Msa0147600 AT5G03600.2 26.730 318 203 12 39 348 47 342 3.81e-21 93.6
Msa0147600 AT1G54790.2 24.533 375 205 16 40 353 30 387 1.03e-20 93.2
Msa0147600 AT3G27950.1 25.770 357 226 12 27 358 18 360 2.79e-20 91.3
Msa0147600 AT4G16233.1 43.434 99 55 1 247 344 5 103 4.10e-20 85.9
Msa0147600 AT3G14210.1 28.485 330 194 15 35 348 33 336 3.95e-19 88.2
Msa0147600 AT4G01130.3 25.694 288 174 9 105 358 3 284 8.79e-18 83.2
Msa0147600 AT1G54030.2 26.996 263 163 8 42 298 53 292 3.74e-17 81.6
Msa0147600 AT4G16220.1 48.315 89 44 1 39 127 28 114 4.09e-17 80.5
Msa0147600 AT2G36325.1 24.620 329 206 13 42 353 48 351 2.31e-15 77.0
Msa0147600 AT4G01130.2 26.032 315 185 13 41 326 34 329 2.98e-15 76.3
Msa0147600 AT1G56670.2 26.715 277 168 11 40 299 39 297 4.54e-15 75.5
Msa0147600 AT1G54020.1 23.715 253 172 7 96 344 1 236 3.31e-14 72.8
Msa0147600 AT1G54020.5 23.715 253 172 7 96 344 1 236 3.31e-14 72.8
Msa0147600 AT1G54020.3 23.715 253 172 7 96 344 1 236 3.31e-14 72.8
Msa0147600 AT3G14220.1 24.930 357 217 14 16 350 5 332 1.19e-13 71.6
Msa0147600 AT1G28580.2 26.695 236 140 11 139 353 60 283 1.31e-13 71.2
Msa0147600 AT3G62280.2 26.148 283 160 14 40 299 35 291 1.99e-13 70.5
Msa0147600 AT5G03980.1 25.941 239 153 8 136 360 90 318 2.45e-13 70.5
Msa0147600 AT1G54020.4 28.000 150 101 4 199 344 41 187 2.59e-12 66.2
Msa0147600 AT1G28600.2 34.286 175 95 10 18 180 9 175 3.54e-11 62.8
Msa0147600 AT1G28610.1 33.766 154 84 7 39 180 29 176 7.61e-11 62.4

Find 89 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGAAATGTTTCTTTCTATT+TGG 0.161144 1_4:+7626750 Msa0147600:three_prime_UTR
AACTTATCAAAATACAAATT+TGG 0.208423 1_4:-7626637 None:intergenic
GGAGTATGTACCTGCATATT+TGG 0.251645 1_4:+7624940 Msa0147600:CDS
ATGCTTCAGAATACGTCTTT+TGG 0.268336 1_4:+7626476 Msa0147600:CDS
AGATCACTGGATTTGAGATT+TGG 0.274463 1_4:-7624965 None:intergenic
GGAGATTCAATAGTTGATTC+AGG 0.282268 1_4:+7621975 Msa0147600:CDS
GGCTTTGCCTCCGGAGCTTC+AGG 0.282493 1_4:+7625001 Msa0147600:CDS
TGATTGTTTAAGTATTTCTT+TGG 0.310588 1_4:+7626676 Msa0147600:three_prime_UTR
TGGTGAGGGTGATTGTTTAA+TGG 0.311578 1_4:+7626696 Msa0147600:three_prime_UTR
AAATCCAGTGATCTTCTTAC+AGG 0.317537 1_4:+7624974 Msa0147600:CDS
AAATGCAATTTCCCTCCTTA+TGG 0.328590 1_4:+7622026 Msa0147600:CDS
TTTACTTGCAGCTGAAGAAT+TGG 0.336004 1_4:+7624910 Msa0147600:intron
AATGTACACTATCCTGCTAT+TGG 0.346065 1_4:-7625952 None:intergenic
TCTGGCATGAACAACATAAT+AGG 0.347030 1_4:-7625382 None:intergenic
TAAGTATGATATAATGCTTT+AGG 0.348716 1_4:-7621767 None:intergenic
GTTGGAGGAGCTAGCTAGTA+TGG 0.367220 1_4:+7621821 Msa0147600:exon
GTTCCAGCAGTGATAGCATT+TGG 0.381837 1_4:+7621954 Msa0147600:CDS
ATCTGCTCAAATATCTTTCA+AGG 0.398464 1_4:-7626549 None:intergenic
TTTATATTTACCGCTATTTG+TGG 0.402069 1_4:-7625040 None:intergenic
AGTTACCTTTACAAAATTAG+TGG 0.409175 1_4:-7625451 None:intergenic
CCATCACAGAGAACTCTTGC+AGG 0.411427 1_4:+7625831 Msa0147600:CDS
AATAGAAAGAAACATTTCAT+AGG 0.424667 1_4:-7626747 None:intergenic
TTACTTGCAGCTGAAGAATT+GGG 0.433495 1_4:+7624911 Msa0147600:intron
ATCAGAAATGAAGTAGTCAT+TGG 0.448951 1_4:-7621861 None:intergenic
GGGAAGTTGAAAGGAATTGT+TGG 0.458148 1_4:+7625285 Msa0147600:CDS
TTTCAAGGTGGTGTCCCAAC+TGG 0.461503 1_4:+7622056 Msa0147600:CDS
ATGTACACTATCCTGCTATT+GGG 0.462198 1_4:-7625951 None:intergenic
ATGTCTAGTTGAGCAGATAA+TGG 0.462544 1_4:-7625246 None:intergenic
CATTGCAAAATCGACCAGTT+GGG 0.467454 1_4:-7622070 None:intergenic
AGGAAGAAAGAAGTGTTTGT+TGG 0.467775 1_4:+7621803 Msa0147600:five_prime_UTR
TATTGGGTGAGTTCTGACTT+AGG 0.467778 1_4:-7625935 None:intergenic
CCTTGAAAATCTTTGCCATA+AGG 0.472764 1_4:-7622041 None:intergenic
GTACTGAGTGCACCACCAAT+TGG 0.474419 1_4:+7625801 Msa0147600:CDS
TCAGAACAAGTAGCATCTAA+AGG 0.482084 1_4:-7626454 None:intergenic
TACAAAATTAGTGGCTGAGT+TGG 0.482731 1_4:-7625442 None:intergenic
GTTTAAGTATTTCTTTGGTG+AGG 0.484607 1_4:+7626681 Msa0147600:three_prime_UTR
ATTGGGTGAGTTCTGACTTA+GGG 0.486477 1_4:-7625934 None:intergenic
CAATAACGACCTCAAAACTT+TGG 0.489567 1_4:+7622001 Msa0147600:CDS
TTTAAGTATTTCTTTGGTGA+GGG 0.490452 1_4:+7626682 Msa0147600:three_prime_UTR
AGATTTGGATCCAAATATGC+AGG 0.491272 1_4:-7624950 None:intergenic
CCATTGCAAAATCGACCAGT+TGG 0.494511 1_4:-7622071 None:intergenic
AGCTGAAGAATTGGGTATCA+AGG 0.494967 1_4:+7624919 Msa0147600:intron
GGAAAGAACAAACTTCATAC+TGG 0.495638 1_4:+7625311 Msa0147600:CDS
AGGAATGTCATATTGCAATC+TGG 0.497840 1_4:-7625400 None:intergenic
ACATGTTCAAAGAATACATT+GGG 0.499245 1_4:+7625265 Msa0147600:CDS
TTTCTATATGCTCGTTCTGT+AGG 0.500946 1_4:-7626511 None:intergenic
TCTCCAAATGCTATCACTGC+TGG 0.502033 1_4:-7621957 None:intergenic
CAGAACAAGTAGCATCTAAA+GGG 0.502089 1_4:-7626453 None:intergenic
GCTGGAACTGTAACATTTGG+TGG 0.503557 1_4:-7621939 None:intergenic
ACCGCTATTTGTGGTGTCAA+AGG 0.504818 1_4:-7625031 None:intergenic
ATACTTATAATTTCTGTCAC+AGG 0.505345 1_4:+7621783 Msa0147600:five_prime_UTR
AATTGCAGGCTTCAAAGTTG+TGG 0.512171 1_4:+7626381 Msa0147600:intron
CCTGCAAGAGTTCTCTGTGA+TGG 0.518882 1_4:-7625831 None:intergenic
GTCAGAACTCACCCAATAGC+AGG 0.522356 1_4:+7625940 Msa0147600:CDS
GACAGAGGTTGTTGTGGCAC+AGG 0.524250 1_4:+7626403 Msa0147600:CDS
AAGAAAGAAGTGTTTGTTGG+AGG 0.525312 1_4:+7621806 Msa0147600:five_prime_UTR
ACTGCTGGAACTGTAACATT+TGG 0.526783 1_4:-7621942 None:intergenic
ATGCAAATAATACAATGAAA+CGG 0.527516 1_4:-7621884 None:intergenic
GGATAGGAAATATATAAACT+TGG 0.528249 1_4:+7625762 Msa0147600:intron
GACATAAGATCAGTGTAAGC+AGG 0.531306 1_4:-7625420 None:intergenic
AGGATCATATCCTGAAGCTC+CGG 0.533916 1_4:-7625011 None:intergenic
TGTGATGGCACACATCCAAT+TGG 0.535323 1_4:-7625816 None:intergenic
ACAGGCGTAGGCTTTGCCTC+CGG 0.541095 1_4:+7624992 Msa0147600:CDS
AAAATCCCCTCAGATATACT+TGG 0.543755 1_4:+7622095 Msa0147600:CDS
AATGATGTGATATATATGAT+TGG 0.544119 1_4:-7626871 None:intergenic
GAGAGTACCAAGTATATCTG+AGG 0.544723 1_4:-7622102 None:intergenic
TGAAAATCTTTGCCATAAGG+AGG 0.545046 1_4:-7622038 None:intergenic
GAATACATTGGGAAGTTGAA+AGG 0.545870 1_4:+7625276 Msa0147600:CDS
ATGAACAACATAATAGGTGT+TGG 0.552774 1_4:-7625376 None:intergenic
TACGCCTGTAAGAAGATCAC+TGG 0.554567 1_4:-7624978 None:intergenic
TGCATTGTGCTACAAAACGA+AGG 0.567143 1_4:+7621902 Msa0147600:CDS
GAAAATCTTTGCCATAAGGA+GGG 0.574938 1_4:-7622037 None:intergenic
AGAGTACCAAGTATATCTGA+GGG 0.575632 1_4:-7622101 None:intergenic
AGTGATCTTCTTACAGGCGT+AGG 0.576669 1_4:+7624980 Msa0147600:CDS
GCATTGTGCTACAAAACGAA+GGG 0.592507 1_4:+7621903 Msa0147600:CDS
GGCTTCAAAGTTGTGGACAG+AGG 0.599995 1_4:+7626388 Msa0147600:intron
TTACAAATTACAATGTACAA+TGG 0.603132 1_4:+7626834 Msa0147600:three_prime_UTR
GACATGTTCAAAGAATACAT+TGG 0.607658 1_4:+7625264 Msa0147600:CDS
CACAGAGAACTCTTGCAGGA+GGG 0.614252 1_4:+7625835 Msa0147600:CDS
ACAGAGGTTGTTGTGGCACA+GGG 0.618045 1_4:+7626404 Msa0147600:CDS
TCCTTTGACACCACAAATAG+CGG 0.630063 1_4:+7625030 Msa0147600:CDS
TCACAGAGAACTCTTGCAGG+AGG 0.631897 1_4:+7625834 Msa0147600:CDS
ATCATATCCTGAAGCTCCGG+AGG 0.633575 1_4:-7625008 None:intergenic
GTTGAAAGGAATTGTTGGCG+AGG 0.649709 1_4:+7625290 Msa0147600:CDS
TTGACAATGATATCAAGTAG+AGG 0.653200 1_4:-7625987 None:intergenic
GATGGCACACATCCAATTGG+TGG 0.659053 1_4:-7625813 None:intergenic
TTGTGGCACAGGGAAACTAG+AGG 0.676349 1_4:+7626414 Msa0147600:CDS
GTTGTGGACAGAGGTTGTTG+TGG 0.717058 1_4:+7626397 Msa0147600:CDS
GAGTACCAAGTATATCTGAG+GGG 0.751977 1_4:-7622100 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTATCTTATTTCTT+TGG + chr1_4:7622761-7622780 Msa0147600:intron 10.0%
!!! AAATTATATTTTCATACTTT+GGG + chr1_4:7623192-7623211 Msa0147600:intron 10.0%
!! AAATGATTAAAACAAATATT+AGG - chr1_4:7623506-7623525 None:intergenic 10.0%
!! TAATGACAAAAATATAATTT+AGG + chr1_4:7623786-7623805 Msa0147600:intron 10.0%
!!! TTTTCTTCAAAAAAAAAAAA+AGG - chr1_4:7624014-7624033 None:intergenic 10.0%
!!! ATTTTTTAATAAAAATGCTA+GGG - chr1_4:7625113-7625132 None:intergenic 10.0%
!!! AATTTTTTAATAAAAATGCT+AGG - chr1_4:7625114-7625133 None:intergenic 10.0%
!!! TAGCATTTTTATTAAAAAAT+TGG + chr1_4:7625113-7625132 Msa0147600:intron 10.0%
!!! AGCATTTTTATTAAAAAATT+GGG + chr1_4:7625114-7625133 Msa0147600:intron 10.0%
!!! GAAAAAATTTGTTTATAGTA+GGG + chr1_4:7622669-7622688 Msa0147600:intron 15.0%
!!! AAAAAATTTGTTTATAGTAG+GGG + chr1_4:7622670-7622689 Msa0147600:intron 15.0%
!!! TTTTTTTTTATAAATAGGAC+CGG - chr1_4:7622837-7622856 None:intergenic 15.0%
!!! TCAGCTTTTTTTTTATAAAT+AGG - chr1_4:7622842-7622861 None:intergenic 15.0%
!!! GAAATTATATTTTCATACTT+TGG + chr1_4:7623191-7623210 Msa0147600:intron 15.0%
!! GACTAAAATGAATAAAAAAA+GGG + chr1_4:7623686-7623705 Msa0147600:intron 15.0%
!! CGTAACAAAATTAATAAATA+AGG - chr1_4:7623870-7623889 None:intergenic 15.0%
!!! GCTTTTTATTTTATAGAAAT+GGG + chr1_4:7625511-7625530 Msa0147600:intron 15.0%
!!! ATTTTTTCCTCTTTAATAAA+TGG + chr1_4:7625741-7625760 Msa0147600:intron 15.0%
!! TATCTGTTTATGATAAAAAA+AGG - chr1_4:7626289-7626308 None:intergenic 15.0%
!!! GTTATTTTATCATATTTCTA+TGG + chr1_4:7626609-7626628 Msa0147600:three_prime_UTR 15.0%
!! AACTTATCAAAATACAAATT+TGG - chr1_4:7626640-7626659 None:intergenic 15.0%
!! ATGCAAATAATACAATGAAA+CGG - chr1_4:7621887-7621906 None:intergenic 20.0%
!!! GGAAAAAATTTGTTTATAGT+AGG + chr1_4:7622668-7622687 Msa0147600:intron 20.0%
!! CATTTCAAAAATGATGTATT+TGG - chr1_4:7622912-7622931 None:intergenic 20.0%
!!! CAAATACATCATTTTTGAAA+TGG + chr1_4:7622910-7622929 Msa0147600:intron 20.0%
!! GTCAAATGTTTCTTATAAAT+AGG + chr1_4:7622942-7622961 Msa0147600:intron 20.0%
!!! CTTGGAAATAATTTTATTGA+TGG - chr1_4:7623325-7623344 None:intergenic 20.0%
!! CATCAATAAAATTATTTCCA+AGG + chr1_4:7623323-7623342 Msa0147600:intron 20.0%
!! TTAATATTAGGTAAGGATAT+AGG - chr1_4:7623413-7623432 None:intergenic 20.0%
!! ACTGAAATTAATATTAGGTA+AGG - chr1_4:7623420-7623439 None:intergenic 20.0%
!! AAACGACTGAAATTAATATT+AGG - chr1_4:7623425-7623444 None:intergenic 20.0%
!!! GACTTAAACGATTTTAAAAA+AGG - chr1_4:7623450-7623469 None:intergenic 20.0%
!! AAGTATTAGATAAACGATAA+AGG + chr1_4:7623664-7623683 Msa0147600:intron 20.0%
!! GGACTAAAATGAATAAAAAA+AGG + chr1_4:7623685-7623704 Msa0147600:intron 20.0%
!!! TTTTTTAGATGGAATTTGTT+AGG - chr1_4:7623956-7623975 None:intergenic 20.0%
!!! ATGGGTTAAAGATTATTTAT+TGG + chr1_4:7624059-7624078 Msa0147600:intron 20.0%
!! ACAATTTCATGAACTAAATT+TGG - chr1_4:7624450-7624469 None:intergenic 20.0%
!!! TTTAGTTCATGAAATTGTAA+TGG + chr1_4:7624452-7624471 Msa0147600:intron 20.0%
!! GACAAAATGATTCATAAATT+TGG + chr1_4:7624508-7624527 Msa0147600:intron 20.0%
!!! TAACTTGCATTATTTTTGTT+TGG - chr1_4:7624705-7624724 None:intergenic 20.0%
!!! TATCATATGTATGTCATTTA+AGG + chr1_4:7624837-7624856 Msa0147600:intron 20.0%
!! ATTTATAAGGTGAATCTAAT+AGG + chr1_4:7625086-7625105 Msa0147600:intron 20.0%
!!! GGCTTTTTATTTTATAGAAA+TGG + chr1_4:7625510-7625529 Msa0147600:intron 20.0%
!!! CATTTTAGTAATTTCCAAAT+GGG - chr1_4:7625542-7625561 None:intergenic 20.0%
!! GTACAAGAAATTTAAAAGAA+GGG + chr1_4:7625562-7625581 Msa0147600:intron 20.0%
!!! AATAGGAATTACCATATTTT+TGG - chr1_4:7626016-7626035 None:intergenic 20.0%
!! TGACTAAGTTAAGATAAAAT+AGG - chr1_4:7626033-7626052 None:intergenic 20.0%
!!! TTTTAAATTATGAGTTGAGT+AGG - chr1_4:7626226-7626245 None:intergenic 20.0%
!!! GTATTTATTTTTTGAATTGC+AGG + chr1_4:7626367-7626386 Msa0147600:intron 20.0%
!! TGATTGTTTAAGTATTTCTT+TGG + chr1_4:7626676-7626695 Msa0147600:three_prime_UTR 20.0%
!! AATAGAAAGAAACATTTCAT+AGG - chr1_4:7626750-7626769 None:intergenic 20.0%
!! ATGAAATGTTTCTTTCTATT+TGG + chr1_4:7626750-7626769 Msa0147600:three_prime_UTR 20.0%
!! TTACAAATTACAATGTACAA+TGG + chr1_4:7626834-7626853 Msa0147600:three_prime_UTR 20.0%
!! AATGATGTGATATATATGAT+TGG - chr1_4:7626874-7626893 None:intergenic 20.0%
! ATACTTATAATTTCTGTCAC+AGG + chr1_4:7621783-7621802 Msa0147600:five_prime_UTR 25.0%
! AGGAATGAGATAAAATAGAA+AGG - chr1_4:7622493-7622512 None:intergenic 25.0%
!!! GTTATTTTGCTTTGAAGTTT+AGG - chr1_4:7622513-7622532 None:intergenic 25.0%
! AAAATAACTGTTCAGCTATA+TGG + chr1_4:7622525-7622544 Msa0147600:intron 25.0%
! CTTCTCAAAATTTCTACATT+TGG - chr1_4:7622697-7622716 None:intergenic 25.0%
!!! CAAATGTAGAAATTTTGAGA+AGG + chr1_4:7622695-7622714 Msa0147600:intron 25.0%
! TGCATCAAACATGATATTTA+AGG + chr1_4:7622784-7622803 Msa0147600:intron 25.0%
! ATGTTTCTTATAAATAGGAC+CGG + chr1_4:7622947-7622966 Msa0147600:intron 25.0%
! TTATAAAACATCATAGTCCT+TGG - chr1_4:7623343-7623362 None:intergenic 25.0%
! AATATTAGGTACAAAGATGA+AGG - chr1_4:7623492-7623511 None:intergenic 25.0%
! CTTGTAGTTCACAAAAAAAA+AGG - chr1_4:7623557-7623576 None:intergenic 25.0%
!!! TATCATTTTTTGATTCGACT+TGG - chr1_4:7623719-7623738 None:intergenic 25.0%
! GTCGAATCAAAAAATGATAA+AGG + chr1_4:7623720-7623739 Msa0147600:intron 25.0%
! CAAAAAAAAAAAAAGGCAAG+CGG - chr1_4:7624007-7624026 None:intergenic 25.0%
!!! GGTAGGATATTTGTTTTTAA+GGG - chr1_4:7624175-7624194 None:intergenic 25.0%
!!! AGGTAGGATATTTGTTTTTA+AGG - chr1_4:7624176-7624195 None:intergenic 25.0%
! ATATATATTGCAAACACTTG+AGG - chr1_4:7624196-7624215 None:intergenic 25.0%
! AGAAACAATATAGTTGAGAT+AGG + chr1_4:7624245-7624264 Msa0147600:intron 25.0%
! ATGATTGACCATATTCATAT+GGG - chr1_4:7624274-7624293 None:intergenic 25.0%
! TTAAGAACCTACTAAATCTA+AGG - chr1_4:7624345-7624364 None:intergenic 25.0%
! ATACTTAAGAGCTAAATCTA+GGG - chr1_4:7624407-7624426 None:intergenic 25.0%
!! ATTTATATCTTCTAGAGGTA+GGG + chr1_4:7624543-7624562 Msa0147600:intron 25.0%
!! TTATTGATAGCTGCAAATAT+AGG - chr1_4:7624739-7624758 None:intergenic 25.0%
! AGCTATCAATAAAATCAGTA+TGG + chr1_4:7624747-7624766 Msa0147600:intron 25.0%
!! ATGAGATATTCTAACTTGTA+AGG + chr1_4:7624781-7624800 Msa0147600:intron 25.0%
! TTTATATTTACCGCTATTTG+TGG - chr1_4:7625043-7625062 None:intergenic 25.0%
! ACATGTTCAAAGAATACATT+GGG + chr1_4:7625265-7625284 Msa0147600:CDS 25.0%
!!! AATAGTCTTTTTGTTTTGGT+GGG + chr1_4:7625336-7625355 Msa0147600:CDS 25.0%
! AGTTACCTTTACAAAATTAG+TGG - chr1_4:7625454-7625473 None:intergenic 25.0%
!!! CCATTTTAGTAATTTCCAAA+TGG - chr1_4:7625543-7625562 None:intergenic 25.0%
! CCATTTGGAAATTACTAAAA+TGG + chr1_4:7625540-7625559 Msa0147600:intron 25.0%
! GGTACAAGAAATTTAAAAGA+AGG + chr1_4:7625561-7625580 Msa0147600:intron 25.0%
! TTTCGATAAGTTTGTATCAT+TGG + chr1_4:7625672-7625691 Msa0147600:intron 25.0%
! TTCCTCTTTAATAAATGGAT+AGG + chr1_4:7625746-7625765 Msa0147600:intron 25.0%
! TTCCTATCCATTTATTAAAG+AGG - chr1_4:7625751-7625770 None:intergenic 25.0%
! GGATAGGAAATATATAAACT+TGG + chr1_4:7625762-7625781 Msa0147600:intron 25.0%
! ATTGTCAACTACCAAAAATA+TGG + chr1_4:7626002-7626021 Msa0147600:CDS 25.0%
! TTTAAGTATTTCTTTGGTGA+GGG + chr1_4:7626682-7626701 Msa0147600:three_prime_UTR 25.0%
! AAATGTCCTATGAAAAATCA+AGG + chr1_4:7626719-7626738 Msa0147600:three_prime_UTR 25.0%
! AATGTCCTATGAAAAATCAA+GGG + chr1_4:7626720-7626739 Msa0147600:three_prime_UTR 25.0%
ATCAGAAATGAAGTAGTCAT+TGG - chr1_4:7621864-7621883 None:intergenic 30.0%
ACTCGAAACAAAATATGACA+GGG - chr1_4:7622618-7622637 None:intergenic 30.0%
!! ATAGTTGTGGCATTTTGATA+GGG + chr1_4:7622646-7622665 Msa0147600:intron 30.0%
GAGAAGGAAGACAAAATTAT+TGG + chr1_4:7622711-7622730 Msa0147600:intron 30.0%
AATATATATCATACTCCCTC+CGG + chr1_4:7622815-7622834 Msa0147600:intron 30.0%
! TTTTTATAAATAGGACCGGA+GGG - chr1_4:7622833-7622852 None:intergenic 30.0%
!!! TTTTTTATAAATAGGACCGG+AGG - chr1_4:7622834-7622853 None:intergenic 30.0%
TTTGGTCTATATTCTAGACA+AGG - chr1_4:7622894-7622913 None:intergenic 30.0%
TAAAGGACCAAGATGAATAT+TGG + chr1_4:7623737-7623756 Msa0147600:intron 30.0%
CTTTCAACCAATATTCATCT+TGG - chr1_4:7623747-7623766 None:intergenic 30.0%
! TGTTTCTGACAGATTATCTA+AGG - chr1_4:7623842-7623861 None:intergenic 30.0%
AACCTAATAAAGCAAATGAG+CGG - chr1_4:7623920-7623939 None:intergenic 30.0%
!!! GTGCAATGCATTTTTTTAGA+TGG - chr1_4:7623967-7623986 None:intergenic 30.0%
TACCCTATCAATGATCTTAT+GGG + chr1_4:7624041-7624060 Msa0147600:intron 30.0%
AACCCATAAGATCATTGATA+GGG - chr1_4:7624046-7624065 None:intergenic 30.0%
TAACCCATAAGATCATTGAT+AGG - chr1_4:7624047-7624066 None:intergenic 30.0%
AAGTCTAGTATGATACTTAC+CGG + chr1_4:7624124-7624143 Msa0147600:intron 30.0%
TCTAGCTACAAGACAATATA+AGG - chr1_4:7624224-7624243 None:intergenic 30.0%
CATGATTGACCATATTCATA+TGG - chr1_4:7624275-7624294 None:intergenic 30.0%
TTGTACACCTTAGATTTAGT+AGG + chr1_4:7624335-7624354 Msa0147600:intron 30.0%
CATACTTAAGAGCTAAATCT+AGG - chr1_4:7624408-7624427 None:intergenic 30.0%
GTCACATTTATATCTTCTAG+AGG + chr1_4:7624538-7624557 Msa0147600:intron 30.0%
! CATTTATATCTTCTAGAGGT+AGG + chr1_4:7624542-7624561 Msa0147600:intron 30.0%
GAACTCTAACTTATAACACT+AGG + chr1_4:7624621-7624640 Msa0147600:intron 30.0%
! AGATATTCTAACTTGTAAGG+TGG + chr1_4:7624784-7624803 Msa0147600:intron 30.0%
ACAAGCAAGTTACAAAACAA+TGG - chr1_4:7625204-7625223 None:intergenic 30.0%
GACATGTTCAAAGAATACAT+TGG + chr1_4:7625264-7625283 Msa0147600:CDS 30.0%
CACCAAAACAAAAAGACTAT+TGG - chr1_4:7625337-7625356 None:intergenic 30.0%
!!! CAATAGTCTTTTTGTTTTGG+TGG + chr1_4:7625335-7625354 Msa0147600:CDS 30.0%
ATGAACAACATAATAGGTGT+TGG - chr1_4:7625379-7625398 None:intergenic 30.0%
TAACTACTATAGTGTCCTAA+AGG + chr1_4:7625477-7625496 Msa0147600:intron 30.0%
AACTACTATAGTGTCCTAAA+GGG + chr1_4:7625478-7625497 Msa0147600:intron 30.0%
!! TTTAAAAGAAGGGTACTCTA+TGG + chr1_4:7625572-7625591 Msa0147600:intron 30.0%
TTGACAATGATATCAAGTAG+AGG - chr1_4:7625990-7626009 None:intergenic 30.0%
AACTTAGTCATAGAATTGTG+AGG + chr1_4:7626043-7626062 Msa0147600:intron 30.0%
ATCTGCTCAAATATCTTTCA+AGG - chr1_4:7626552-7626571 None:intergenic 30.0%
GTTTAAGTATTTCTTTGGTG+AGG + chr1_4:7626681-7626700 Msa0147600:three_prime_UTR 30.0%
!!! TGTACAATGGTTTTATGTTG+AGG + chr1_4:7626847-7626866 Msa0147600:three_prime_UTR 30.0%
!! AGGAAGAAAGAAGTGTTTGT+TGG + chr1_4:7621803-7621822 Msa0147600:five_prime_UTR 35.0%
!! AAGAAAGAAGTGTTTGTTGG+AGG + chr1_4:7621806-7621825 Msa0147600:five_prime_UTR 35.0%
! GGAGATTCAATAGTTGATTC+AGG + chr1_4:7621975-7621994 Msa0147600:CDS 35.0%
CAATAACGACCTCAAAACTT+TGG + chr1_4:7622001-7622020 Msa0147600:CDS 35.0%
! TGCATTTGACCAAAGTTTTG+AGG - chr1_4:7622013-7622032 None:intergenic 35.0%
AAATGCAATTTCCCTCCTTA+TGG + chr1_4:7622026-7622045 Msa0147600:CDS 35.0%
GAAAATCTTTGCCATAAGGA+GGG - chr1_4:7622040-7622059 None:intergenic 35.0%
TGAAAATCTTTGCCATAAGG+AGG - chr1_4:7622041-7622060 None:intergenic 35.0%
CCTTGAAAATCTTTGCCATA+AGG - chr1_4:7622044-7622063 None:intergenic 35.0%
! CCTTATGGCAAAGATTTTCA+AGG + chr1_4:7622041-7622060 Msa0147600:CDS 35.0%
!! TATGGCAAAGATTTTCAAGG+TGG + chr1_4:7622044-7622063 Msa0147600:CDS 35.0%
AAAATCCCCTCAGATATACT+TGG + chr1_4:7622095-7622114 Msa0147600:CDS 35.0%
! AGAGTACCAAGTATATCTGA+GGG - chr1_4:7622104-7622123 None:intergenic 35.0%
CACTCGAAACAAAATATGAC+AGG - chr1_4:7622619-7622638 None:intergenic 35.0%
!! GATAGTTGTGGCATTTTGAT+AGG + chr1_4:7622645-7622664 Msa0147600:intron 35.0%
!! TAGTTGTGGCATTTTGATAG+GGG + chr1_4:7622647-7622666 Msa0147600:intron 35.0%
GGAAGACAAAATTATTGGAG+AGG + chr1_4:7622716-7622735 Msa0147600:intron 35.0%
TTTCTTATAAATAGGACCGG+AGG + chr1_4:7622950-7622969 Msa0147600:intron 35.0%
CCTTTCACATGAGAATTGTA+GGG - chr1_4:7623234-7623253 None:intergenic 35.0%
CCTACAATTCTCATGTGAAA+GGG + chr1_4:7623232-7623251 Msa0147600:intron 35.0%
CAAATGAGCGGGAAAAAATT+AGG - chr1_4:7623908-7623927 None:intergenic 35.0%
ACCTAATAAAGCAAATGAGC+GGG - chr1_4:7623919-7623938 None:intergenic 35.0%
AAAAAAAAAGGCAAGCGGAT+AGG - chr1_4:7624002-7624021 None:intergenic 35.0%
CTACCCTATCAATGATCTTA+TGG + chr1_4:7624040-7624059 Msa0147600:intron 35.0%
! TTACCGGCGTTTAAAATACA+AGG + chr1_4:7624140-7624159 Msa0147600:intron 35.0%
! TACCGGCGTTTAAAATACAA+GGG + chr1_4:7624141-7624160 Msa0147600:intron 35.0%
ATATTGCAAACACTTGAGGT+AGG - chr1_4:7624192-7624211 None:intergenic 35.0%
ATAGGAGACCCATATGAATA+TGG + chr1_4:7624263-7624282 Msa0147600:intron 35.0%
! CTAAGGTGTACAAAGTATCA+TGG - chr1_4:7624328-7624347 None:intergenic 35.0%
TTTACTTGCAGCTGAAGAAT+TGG + chr1_4:7624910-7624929 Msa0147600:intron 35.0%
TTACTTGCAGCTGAAGAATT+GGG + chr1_4:7624911-7624930 Msa0147600:intron 35.0%
AGATTTGGATCCAAATATGC+AGG - chr1_4:7624953-7624972 None:intergenic 35.0%
! AGATCACTGGATTTGAGATT+TGG - chr1_4:7624968-7624987 None:intergenic 35.0%
AAATCCAGTGATCTTCTTAC+AGG + chr1_4:7624974-7624993 Msa0147600:CDS 35.0%
TGTTAAAATTCACCCTAGTG+TGG + chr1_4:7625154-7625173 Msa0147600:intron 35.0%
GTTAAAATTCACCCTAGTGT+GGG + chr1_4:7625155-7625174 Msa0147600:intron 35.0%
ATGTCTAGTTGAGCAGATAA+TGG - chr1_4:7625249-7625268 None:intergenic 35.0%
GAATACATTGGGAAGTTGAA+AGG + chr1_4:7625276-7625295 Msa0147600:CDS 35.0%
GGAAAGAACAAACTTCATAC+TGG + chr1_4:7625311-7625330 Msa0147600:CDS 35.0%
!! GGCCAATAGTCTTTTTGTTT+TGG + chr1_4:7625332-7625351 Msa0147600:CDS 35.0%
TCTGGCATGAACAACATAAT+AGG - chr1_4:7625385-7625404 None:intergenic 35.0%
AGGAATGTCATATTGCAATC+TGG - chr1_4:7625403-7625422 None:intergenic 35.0%
TACAAAATTAGTGGCTGAGT+TGG - chr1_4:7625445-7625464 None:intergenic 35.0%
! CTCAGCCACTAATTTTGTAA+AGG + chr1_4:7625446-7625465 Msa0147600:CDS 35.0%
ACTACTATAGTGTCCTAAAG+GGG + chr1_4:7625479-7625498 Msa0147600:intron 35.0%
ATGTACACTATCCTGCTATT+GGG - chr1_4:7625954-7625973 None:intergenic 35.0%
AATGTACACTATCCTGCTAT+TGG - chr1_4:7625955-7625974 None:intergenic 35.0%
CAGAACAAGTAGCATCTAAA+GGG - chr1_4:7626456-7626475 None:intergenic 35.0%
TCAGAACAAGTAGCATCTAA+AGG - chr1_4:7626457-7626476 None:intergenic 35.0%
! ATGCTTCAGAATACGTCTTT+TGG + chr1_4:7626476-7626495 Msa0147600:CDS 35.0%
! TGCTTCAGAATACGTCTTTT+GGG + chr1_4:7626477-7626496 Msa0147600:CDS 35.0%
TTTCTATATGCTCGTTCTGT+AGG - chr1_4:7626514-7626533 None:intergenic 35.0%
TGCATTGTGCTACAAAACGA+AGG + chr1_4:7621902-7621921 Msa0147600:CDS 40.0%
GCATTGTGCTACAAAACGAA+GGG + chr1_4:7621903-7621922 Msa0147600:CDS 40.0%
ACTGCTGGAACTGTAACATT+TGG - chr1_4:7621945-7621964 None:intergenic 40.0%
CATTGCAAAATCGACCAGTT+GGG - chr1_4:7622073-7622092 None:intergenic 40.0%
GAGTACCAAGTATATCTGAG+GGG - chr1_4:7622103-7622122 None:intergenic 40.0%
!! GAGAGTACCAAGTATATCTG+AGG - chr1_4:7622105-7622124 None:intergenic 40.0%
ATGACAGGGCGAAAGAAAAA+CGG - chr1_4:7622604-7622623 None:intergenic 40.0%
! CGAGTGTGAATTGATAGTTG+TGG + chr1_4:7622633-7622652 Msa0147600:intron 40.0%
TTAAGGGTTCGTTTGATGTC+AGG - chr1_4:7622995-7623014 None:intergenic 40.0%
CCCTACAATTCTCATGTGAA+AGG + chr1_4:7623231-7623250 Msa0147600:intron 40.0%
CCCTTTCACATGAGAATTGT+AGG - chr1_4:7623235-7623254 None:intergenic 40.0%
! TCCCGCTCATTTGCTTTATT+AGG + chr1_4:7623915-7623934 Msa0147600:intron 40.0%
!! AGCCCTTGTATTTTAAACGC+CGG - chr1_4:7624146-7624165 None:intergenic 40.0%
TAGAGGTAGGGTATAGAAGA+GGG + chr1_4:7624555-7624574 Msa0147600:intron 40.0%
GAGAAGAAGAAGGAATGTTG+TGG + chr1_4:7624599-7624618 Msa0147600:intron 40.0%
ATAACACTAGGTCCACGATT+TGG + chr1_4:7624633-7624652 Msa0147600:intron 40.0%
GACAACAAACATCCAAATCG+TGG - chr1_4:7624648-7624667 None:intergenic 40.0%
AGCTGAAGAATTGGGTATCA+AGG + chr1_4:7624919-7624938 Msa0147600:intron 40.0%
GGAGTATGTACCTGCATATT+TGG + chr1_4:7624940-7624959 Msa0147600:CDS 40.0%
TCCTTTGACACCACAAATAG+CGG + chr1_4:7625030-7625049 Msa0147600:CDS 40.0%
ATCAATTTCCACCCACACTA+GGG - chr1_4:7625169-7625188 None:intergenic 40.0%
TATCAATTTCCACCCACACT+AGG - chr1_4:7625170-7625189 None:intergenic 40.0%
GGGAAGTTGAAAGGAATTGT+TGG + chr1_4:7625285-7625304 Msa0147600:CDS 40.0%
!!! AGTCTTTTTGTTTTGGTGGG+AGG + chr1_4:7625339-7625358 Msa0147600:CDS 40.0%
GACATAAGATCAGTGTAAGC+AGG - chr1_4:7625423-7625442 None:intergenic 40.0%
TGTCCTAAAGGGGATAAGAT+GGG + chr1_4:7625489-7625508 Msa0147600:intron 40.0%
!! AGAAATGGGTTTTGCCCATT+TGG + chr1_4:7625525-7625544 Msa0147600:intron 40.0%
CAACACCTGAAAAAGCTGAT+CGG + chr1_4:7625609-7625628 Msa0147600:intron 40.0%
AACACCTGAAAAAGCTGATC+GGG + chr1_4:7625610-7625629 Msa0147600:intron 40.0%
! ATTGGGTGAGTTCTGACTTA+GGG - chr1_4:7625937-7625956 None:intergenic 40.0%
! TATTGGGTGAGTTCTGACTT+AGG - chr1_4:7625938-7625957 None:intergenic 40.0%
AATTGCAGGCTTCAAAGTTG+TGG + chr1_4:7626381-7626400 Msa0147600:intron 40.0%
TGGTGAGGGTGATTGTTTAA+TGG + chr1_4:7626696-7626715 Msa0147600:three_prime_UTR 40.0%
! GACAGCCCTTGATTTTTCAT+AGG - chr1_4:7626728-7626747 None:intergenic 40.0%
GCTGGAACTGTAACATTTGG+TGG - chr1_4:7621942-7621961 None:intergenic 45.0%
GTTCCAGCAGTGATAGCATT+TGG + chr1_4:7621954-7621973 Msa0147600:CDS 45.0%
TCTCCAAATGCTATCACTGC+TGG - chr1_4:7621960-7621979 None:intergenic 45.0%
CCATTGCAAAATCGACCAGT+TGG - chr1_4:7622074-7622093 None:intergenic 45.0%
!! CCAACTGGTCGATTTTGCAA+TGG + chr1_4:7622071-7622090 Msa0147600:CDS 45.0%
GGTTCGTTTGATGTCAGGAT+AGG - chr1_4:7622990-7623009 None:intergenic 45.0%
CTAGAGGTAGGGTATAGAAG+AGG + chr1_4:7624554-7624573 Msa0147600:intron 45.0%
AGAGGTAGGGTATAGAAGAG+GGG + chr1_4:7624556-7624575 Msa0147600:intron 45.0%
AAAGAGAGGGGAGAAGAAGA+AGG + chr1_4:7624589-7624608 Msa0147600:intron 45.0%
TACGCCTGTAAGAAGATCAC+TGG - chr1_4:7624981-7625000 None:intergenic 45.0%
AGTGATCTTCTTACAGGCGT+AGG + chr1_4:7624980-7624999 Msa0147600:CDS 45.0%
AGGATCATATCCTGAAGCTC+CGG - chr1_4:7625014-7625033 None:intergenic 45.0%
! ACCGCTATTTGTGGTGTCAA+AGG - chr1_4:7625034-7625053 None:intergenic 45.0%
AAAATTCACCCTAGTGTGGG+TGG + chr1_4:7625158-7625177 Msa0147600:intron 45.0%
GTTGAAAGGAATTGTTGGCG+AGG + chr1_4:7625290-7625309 Msa0147600:CDS 45.0%
GTGTCCTAAAGGGGATAAGA+TGG + chr1_4:7625488-7625507 Msa0147600:intron 45.0%
AAGCCCATCTTATCCCCTTT+AGG - chr1_4:7625495-7625514 None:intergenic 45.0%
!! ATCTCCCGATCAGCTTTTTC+AGG - chr1_4:7625617-7625636 None:intergenic 45.0%
TGTGATGGCACACATCCAAT+TGG - chr1_4:7625819-7625838 None:intergenic 45.0%
!! TTTATTATATTATACATTAA+GGG - chr1_4:7623011-7623030 None:intergenic 5.0%
!! ATTTATTATATTATACATTA+AGG - chr1_4:7623012-7623031 None:intergenic 5.0%
!!! AAAATAATTAAAAGTTTTTT+TGG - chr1_4:7623143-7623162 None:intergenic 5.0%
!! AAAATATAATTTCATAAAAA+TGG - chr1_4:7623184-7623203 None:intergenic 5.0%
!!! AGATATATTTAAAATTTATA+AGG + chr1_4:7625073-7625092 Msa0147600:intron 5.0%
!! ATTAAAAATTGAAAATATAT+CGG - chr1_4:7625708-7625727 None:intergenic 5.0%
GTTGGAGGAGCTAGCTAGTA+TGG + chr1_4:7621821-7621840 Msa0147600:exon 50.0%
TTTCAAGGTGGTGTCCCAAC+TGG + chr1_4:7622056-7622075 Msa0147600:CDS 50.0%
CGTTTGATGTCAGGATAGGC+AGG - chr1_4:7622986-7623005 None:intergenic 50.0%
ATCATATCCTGAAGCTCCGG+AGG - chr1_4:7625011-7625030 None:intergenic 50.0%
GTACTGAGTGCACCACCAAT+TGG + chr1_4:7625801-7625820 Msa0147600:CDS 50.0%
GATGGCACACATCCAATTGG+TGG - chr1_4:7625816-7625835 None:intergenic 50.0%
CCTGCAAGAGTTCTCTGTGA+TGG - chr1_4:7625834-7625853 None:intergenic 50.0%
CCATCACAGAGAACTCTTGC+AGG + chr1_4:7625831-7625850 Msa0147600:CDS 50.0%
TCACAGAGAACTCTTGCAGG+AGG + chr1_4:7625834-7625853 Msa0147600:CDS 50.0%
CACAGAGAACTCTTGCAGGA+GGG + chr1_4:7625835-7625854 Msa0147600:CDS 50.0%
GTCAGAACTCACCCAATAGC+AGG + chr1_4:7625940-7625959 Msa0147600:CDS 50.0%
GGCTTCAAAGTTGTGGACAG+AGG + chr1_4:7626388-7626407 Msa0147600:intron 50.0%
GTTGTGGACAGAGGTTGTTG+TGG + chr1_4:7626397-7626416 Msa0147600:CDS 50.0%
ACAGAGGTTGTTGTGGCACA+GGG + chr1_4:7626404-7626423 Msa0147600:CDS 50.0%
TTGTGGCACAGGGAAACTAG+AGG + chr1_4:7626414-7626433 Msa0147600:CDS 50.0%
GGCAGGCATGATACTTCCTC+CGG - chr1_4:7622969-7622988 None:intergenic 55.0%
GAGAAAACCCGTGCGATGCA+CGG + chr1_4:7624096-7624115 Msa0147600:intron 55.0%
AGAAAACCCGTGCGATGCAC+GGG + chr1_4:7624097-7624116 Msa0147600:intron 55.0%
! TTTTGACCCGTGCATCGCAC+GGG - chr1_4:7624106-7624125 None:intergenic 55.0%
! CTTTTGACCCGTGCATCGCA+CGG - chr1_4:7624107-7624126 None:intergenic 55.0%
GGTAGGGTATAGAAGAGGGG+TGG + chr1_4:7624559-7624578 Msa0147600:intron 55.0%
AGGGTATAGAAGAGGGGTGG+TGG + chr1_4:7624562-7624581 Msa0147600:intron 55.0%
! GGGTGGTGGTGTGAAAGAGA+GGG + chr1_4:7624576-7624595 Msa0147600:intron 55.0%
! GGTGGTGGTGTGAAAGAGAG+GGG + chr1_4:7624577-7624596 Msa0147600:intron 55.0%
GACAGAGGTTGTTGTGGCAC+AGG + chr1_4:7626403-7626422 Msa0147600:CDS 55.0%
! GGGGTGGTGGTGTGAAAGAG+AGG + chr1_4:7624575-7624594 Msa0147600:intron 60.0%
ACAGGCGTAGGCTTTGCCTC+CGG + chr1_4:7624992-7625011 Msa0147600:CDS 60.0%
GGCTTTGCCTCCGGAGCTTC+AGG + chr1_4:7625001-7625020 Msa0147600:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 7621768 7626903 7621768 ID=Msa0147600;Name=Msa0147600
chr1_4 mRNA 7621768 7626903 7621768 ID=Msa0147600-mRNA-1;Parent=Msa0147600;Name=Msa0147600-mRNA-1;_AED=0.12;_eAED=0.12;_QI=72|1|1|1|1|1|5|324|361
chr1_4 exon 7621768 7622116 7621768 ID=Msa0147600-mRNA-1:exon:3299;Parent=Msa0147600-mRNA-1
chr1_4 exon 7624921 7625051 7624921 ID=Msa0147600-mRNA-1:exon:3300;Parent=Msa0147600-mRNA-1
chr1_4 exon 7625237 7625467 7625237 ID=Msa0147600-mRNA-1:exon:3301;Parent=Msa0147600-mRNA-1
chr1_4 exon 7625768 7626023 7625768 ID=Msa0147600-mRNA-1:exon:3302;Parent=Msa0147600-mRNA-1
chr1_4 exon 7626389 7626903 7626389 ID=Msa0147600-mRNA-1:exon:3303;Parent=Msa0147600-mRNA-1
chr1_4 five_prime_UTR 7621768 7621839 7621768 ID=Msa0147600-mRNA-1:five_prime_utr;Parent=Msa0147600-mRNA-1
chr1_4 CDS 7621840 7622116 7621840 ID=Msa0147600-mRNA-1:cds;Parent=Msa0147600-mRNA-1
chr1_4 CDS 7624921 7625051 7624921 ID=Msa0147600-mRNA-1:cds;Parent=Msa0147600-mRNA-1
chr1_4 CDS 7625237 7625467 7625237 ID=Msa0147600-mRNA-1:cds;Parent=Msa0147600-mRNA-1
chr1_4 CDS 7625768 7626023 7625768 ID=Msa0147600-mRNA-1:cds;Parent=Msa0147600-mRNA-1
chr1_4 CDS 7626389 7626579 7626389 ID=Msa0147600-mRNA-1:cds;Parent=Msa0147600-mRNA-1
chr1_4 three_prime_UTR 7626580 7626903 7626580 ID=Msa0147600-mRNA-1:three_prime_utr;Parent=Msa0147600-mRNA-1
Gene Sequence

>Msa0147600

ATGGTGCAGCTCACAACTTCTCCAATGACTACTTCATTTCTGATCCGTTTCATTGTATTATTTGCATTGTGCTACAAAACGAAGGGTTTGATAAAGCTTCCACCAAATGTTACAGTTCCAGCAGTGATAGCATTTGGAGATTCAATAGTTGATTCAGGAAACAATAACGACCTCAAAACTTTGGTCAAATGCAATTTCCCTCCTTATGGCAAAGATTTTCAAGGTGGTGTCCCAACTGGTCGATTTTGCAATGGAAAAATCCCCTCAGATATACTTGCTGAAGAATTGGGTATCAAGGAGTATGTACCTGCATATTTGGATCCAAATCTCAAATCCAGTGATCTTCTTACAGGCGTAGGCTTTGCCTCCGGAGCTTCAGGATATGATCCTTTGACACCACAAATAGCGTCAGTAATACCATTATCTGCTCAACTAGACATGTTCAAAGAATACATTGGGAAGTTGAAAGGAATTGTTGGCGAGGAAAGAACAAACTTCATACTGGCCAATAGTCTTTTTGTTTTGGTGGGAGGTAGTGACGACATTGCCAACACCTATTATGTTGTTCATGCCAGATTGCAATATGACATTCCTGCTTACACTGATCTTATGTCCAACTCAGCCACTAATTTTGTAAAGGAAATATATAAACTTGGAGCTCGTAGAATTGCTGTACTGAGTGCACCACCAATTGGATGTGTGCCATCACAGAGAACTCTTGCAGGAGGGATAGTAAGAGAGTGTGCAGAAAAGTATAATGATGCAGCAAAGTTATTCAACTCAAAACTCTCAAAGCAGCTTGATTCCCTAAGTCAGAACTCACCCAATAGCAGGATAGTGTACATTGATGTTTACACTCCTCTACTTGATATCATTGTCAACTACCAAAAATATGGCTTCAAAGTTGTGGACAGAGGTTGTTGTGGCACAGGGAAACTAGAGGTTGCAGTGTTATGCAACCCTTTAGATGCTACTTGTTCTGATGCTTCAGAATACGTCTTTTGGGATAGTTATCATCCTACAGAACGAGCATATAGAAAGCTCGTAGATTCAGTCCTTGAAAGATATTTGAGCAGATTGATATGA
Protein sequence

>Msa0147600

MVQLTTSPMTTSFLIRFIVLFALCYKTKGLIKLPPNVTVPAVIAFGDSIVDSGNNNDLKTLVKCNFPPYGKDFQGGVPTGRFCNGKIPSDILAEELGIKEYVPAYLDPNLKSSDLLTGVGFASGASGYDPLTPQIASVIPLSAQLDMFKEYIGKLKGIVGEERTNFILANSLFVLVGGSDDIANTYYVVHARLQYDIPAYTDLMSNSATNFVKEIYKLGARRIAVLSAPPIGCVPSQRTLAGGIVRECAEKYNDAAKLFNSKLSKQLDSLSQNSPNSRIVYIDVYTPLLDIIVNYQKYGFKVVDRGCCGTGKLEVAVLCNPLDATCSDASEYVFWDSYHPTERAYRKLVDSVLERYLSRLI*