Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479270 | AAZ32865.1 | 100.000 | 117 | 0 | 0 | 1 | 117 | 1 | 117 | 3.39e-78 | 236 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479270 | sp|Q43636|TRXH_RICCO | 80.000 | 115 | 23 | 0 | 1 | 115 | 1 | 115 | 7.01e-65 | 195 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479270 | Q45NL7 | 100.000 | 117 | 0 | 0 | 1 | 117 | 1 | 117 | 1.62e-78 | 236 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0479270 | 0.820275 | 7.473559e-53 | -8.615850e-47 |
| Msa0008200 | Msa0479270 | 0.802175 | 6.356345e-49 | -8.615850e-47 |
| Msa0020390 | Msa0479270 | 0.832896 | 7.278363e-56 | -8.615850e-47 |
| Msa0020410 | Msa0479270 | 0.805167 | 1.521258e-49 | -8.615850e-47 |
| Msa0026910 | Msa0479270 | 0.811268 | 7.622357e-51 | -8.615850e-47 |
| Msa0030300 | Msa0479270 | 0.812385 | 4.354066e-51 | -8.615850e-47 |
| Msa0034970 | Msa0479270 | 0.809588 | 1.756874e-50 | -8.615850e-47 |
| Msa0038870 | Msa0479270 | 0.818608 | 1.793699e-52 | -8.615850e-47 |
| Msa0043980 | Msa0479270 | 0.844652 | 6.619913e-59 | -8.615850e-47 |
| Msa0047460 | Msa0479270 | 0.800803 | 1.214194e-48 | -8.615850e-47 |
| Msa0051750 | Msa0479270 | 0.814079 | 1.849292e-51 | -8.615850e-47 |
| Msa0068020 | Msa0479270 | 0.804880 | 1.746871e-49 | -8.615850e-47 |
| Msa0072420 | Msa0479270 | 0.803302 | 3.719988e-49 | -8.615850e-47 |
| Msa0081650 | Msa0479270 | 0.803303 | 3.717755e-49 | -8.615850e-47 |
| Msa0083280 | Msa0479270 | 0.802581 | 5.240990e-49 | -8.615850e-47 |
| Msa0086420 | Msa0479270 | 0.827337 | 1.653903e-54 | -8.615850e-47 |
| Msa0090360 | Msa0479270 | 0.822429 | 2.380022e-53 | -8.615850e-47 |
| Msa0090520 | Msa0479270 | 0.814289 | 1.661945e-51 | -8.615850e-47 |
| Msa0090550 | Msa0479270 | 0.825842 | 3.759171e-54 | -8.615850e-47 |
| Msa0091610 | Msa0479270 | 0.833750 | 4.456202e-56 | -8.615850e-47 |
| Msa0104800 | Msa0479270 | 0.803612 | 3.207573e-49 | -8.615850e-47 |
| Msa0115370 | Msa0479270 | 0.804006 | 2.657391e-49 | -8.615850e-47 |
| Msa0115990 | Msa0479270 | 0.815280 | 1.002104e-51 | -8.615850e-47 |
| Msa0123560 | Msa0479270 | 0.847028 | 1.498603e-59 | -8.615850e-47 |
| Msa0127800 | Msa0479270 | 0.805684 | 1.185491e-49 | -8.615850e-47 |
| Msa0137840 | Msa0479270 | 0.801187 | 1.013413e-48 | -8.615850e-47 |
| Msa0137990 | Msa0479270 | 0.816006 | 6.908171e-52 | -8.615850e-47 |
| Msa0140110 | Msa0479270 | 0.823825 | 1.124551e-53 | -8.615850e-47 |
| Msa0150260 | Msa0479270 | 0.805966 | 1.034361e-49 | -8.615850e-47 |
| Msa0151180 | Msa0479270 | 0.813094 | 3.045230e-51 | -8.615850e-47 |
| Msa0167980 | Msa0479270 | 0.814537 | 1.464555e-51 | -8.615850e-47 |
| Msa0175840 | Msa0479270 | 0.818169 | 2.255077e-52 | -8.615850e-47 |
| Msa0182990 | Msa0479270 | 0.805369 | 1.380375e-49 | -8.615850e-47 |
| Msa0183900 | Msa0479270 | 0.813098 | 3.040258e-51 | -8.615850e-47 |
| Msa0184040 | Msa0479270 | 0.816094 | 6.601211e-52 | -8.615850e-47 |
| Msa0187490 | Msa0479270 | 0.800238 | 1.583217e-48 | -8.615850e-47 |
| Msa0189520 | Msa0479270 | 0.824100 | 9.690743e-54 | -8.615850e-47 |
| Msa0191070 | Msa0479270 | 0.834604 | 2.722270e-56 | -8.615850e-47 |
| Msa0194410 | Msa0479270 | 0.801706 | 7.933939e-49 | -8.615850e-47 |
| Msa0194950 | Msa0479270 | -0.800816 | 1.207027e-48 | -8.615850e-47 |
| Msa0204960 | Msa0479270 | 0.801429 | 9.042344e-49 | -8.615850e-47 |
| Msa0207030 | Msa0479270 | 0.811544 | 6.640419e-51 | -8.615850e-47 |
| Msa0209500 | Msa0479270 | 0.818831 | 1.596417e-52 | -8.615850e-47 |
| Msa0217670 | Msa0479270 | 0.802308 | 5.966643e-49 | -8.615850e-47 |
| Msa0217680 | Msa0479270 | 0.809056 | 2.284543e-50 | -8.615850e-47 |
| Msa0230610 | Msa0479270 | 0.829655 | 4.559595e-55 | -8.615850e-47 |
| Msa0233370 | Msa0479270 | 0.809950 | 1.468266e-50 | -8.615850e-47 |
| Msa0370250 | Msa0479270 | 0.800242 | 1.580164e-48 | -8.615850e-47 |
| Msa0376310 | Msa0479270 | 0.802259 | 6.107199e-49 | -8.615850e-47 |
| Msa0376910 | Msa0479270 | 0.825854 | 3.734933e-54 | -8.615850e-47 |
| Msa0380300 | Msa0479270 | 0.819185 | 1.326375e-52 | -8.615850e-47 |
| Msa0385500 | Msa0479270 | 0.819510 | 1.118455e-52 | -8.615850e-47 |
| Msa0391690 | Msa0479270 | 0.815733 | 7.948336e-52 | -8.615850e-47 |
| Msa0403770 | Msa0479270 | 0.808757 | 2.648082e-50 | -8.615850e-47 |
| Msa0415430 | Msa0479270 | 0.816479 | 5.412971e-52 | -8.615850e-47 |
| Msa0429030 | Msa0479270 | 0.822345 | 2.489880e-53 | -8.615850e-47 |
| Msa0433360 | Msa0479270 | 0.803744 | 3.012190e-49 | -8.615850e-47 |
| Msa0442610 | Msa0479270 | 0.801782 | 7.655309e-49 | -8.615850e-47 |
| Msa0469990 | Msa0479270 | 0.814409 | 1.563581e-51 | -8.615850e-47 |
| Msa0471900 | Msa0479270 | 0.814327 | 1.630290e-51 | -8.615850e-47 |
| Msa0479270 | Msa0481810 | 0.817697 | 2.882251e-52 | -8.615850e-47 |
| Msa0479270 | Msa0484740 | 0.831059 | 2.068733e-55 | -8.615850e-47 |
| Msa0479270 | Msa0485850 | 0.803340 | 3.653562e-49 | -8.615850e-47 |
| Msa0479270 | Msa0520270 | 0.800795 | 1.218514e-48 | -8.615850e-47 |
| Msa0479270 | Msa0524500 | 0.818521 | 1.876971e-52 | -8.615850e-47 |
| Msa0479270 | Msa0542290 | 0.813734 | 2.203670e-51 | -8.615850e-47 |
| Msa0479270 | Msa0542560 | 0.807532 | 4.827003e-50 | -8.615850e-47 |
| Msa0479270 | Msa0547160 | 0.826668 | 2.390278e-54 | -8.615850e-47 |
| Msa0479270 | Msa0548240 | 0.818612 | 1.790163e-52 | -8.615850e-47 |
| Msa0479270 | Msa0555450 | 0.812541 | 4.025014e-51 | -8.615850e-47 |
| Msa0479270 | Msa0556060 | 0.841620 | 4.256227e-58 | -8.615850e-47 |
| Msa0479270 | Msa0572840 | 0.802502 | 5.442817e-49 | -8.615850e-47 |
| Msa0479270 | Msa0581110 | 0.812264 | 4.626945e-51 | -8.615850e-47 |
| Msa0479270 | Msa0589190 | 0.800238 | 1.582718e-48 | -8.615850e-47 |
| Msa0479270 | Msa0604290 | 0.811114 | 8.230231e-51 | -8.615850e-47 |
| Msa0479270 | Msa0613920 | 0.801768 | 7.704570e-49 | -8.615850e-47 |
| Msa0479270 | Msa0618970 | 0.800170 | 1.634468e-48 | -8.615850e-47 |
| Msa0479270 | Msa0657120 | 0.827711 | 1.345197e-54 | -8.615850e-47 |
| Msa0479270 | Msa0662630 | 0.800286 | 1.547740e-48 | -8.615850e-47 |
| Msa0479270 | Msa0682680 | 0.814103 | 1.826942e-51 | -8.615850e-47 |
| Msa0479270 | Msa0687020 | 0.824748 | 6.824091e-54 | -8.615850e-47 |
| Msa0479270 | Msa0692840 | 0.809507 | 1.828596e-50 | -8.615850e-47 |
| Msa0479270 | Msa0692940 | 0.816293 | 5.958633e-52 | -8.615850e-47 |
| Msa0479270 | Msa0698540 | 0.800633 | 1.315163e-48 | -8.615850e-47 |
| Msa0479270 | Msa0701100 | 0.813074 | 3.076109e-51 | -8.615850e-47 |
| Msa0479270 | Msa0722020 | 0.843818 | 1.108781e-58 | -8.615850e-47 |
| Msa0479270 | Msa0732880 | 0.841702 | 4.047885e-58 | -8.615850e-47 |
| Msa0479270 | Msa0750170 | 0.831030 | 2.102889e-55 | -8.615850e-47 |
| Msa0479270 | Msa0763020 | 0.804464 | 2.133480e-49 | -8.615850e-47 |
| Msa0479270 | Msa0763070 | 0.810728 | 9.975602e-51 | -8.615850e-47 |
| Msa0479270 | Msa0794730 | 0.812702 | 3.711124e-51 | -8.615850e-47 |
| Msa0479270 | Msa0800370 | 0.840623 | 7.776678e-58 | -8.615850e-47 |
| Msa0479270 | Msa0822310 | -0.807079 | 6.022484e-50 | -8.615850e-47 |
| Msa0479270 | Msa0832150 | 0.815222 | 1.032501e-51 | -8.615850e-47 |
| Msa0479270 | Msa0833190 | -0.806112 | 9.636858e-50 | -8.615850e-47 |
| Msa0479270 | Msa0860030 | -0.805353 | 1.390478e-49 | -8.615850e-47 |
| Msa0479270 | Msa0872440 | 0.830606 | 2.672013e-55 | -8.615850e-47 |
| Msa0479270 | Msa0932570 | 0.812374 | 4.378958e-51 | -8.615850e-47 |
| Msa0479270 | Msa0974950 | 0.805628 | 1.217824e-49 | -8.615850e-47 |
| Msa0479270 | Msa0980540 | 0.808120 | 3.619392e-50 | -8.615850e-47 |
| Msa0479270 | Msa0980880 | 0.808682 | 2.747531e-50 | -8.615850e-47 |
| Msa0479270 | Msa0987370 | 0.805340 | 1.399804e-49 | -8.615850e-47 |
| Msa0479270 | Msa0994370 | 0.811981 | 5.333152e-51 | -8.615850e-47 |
| Msa0479270 | Msa0997970 | 0.819067 | 1.410820e-52 | -8.615850e-47 |
| Msa0479270 | Msa1024750 | 0.832183 | 1.092921e-55 | -8.615850e-47 |
| Msa0479270 | Msa1034150 | 0.823674 | 1.220061e-53 | -8.615850e-47 |
| Msa0479270 | Msa1058750 | 0.809552 | 1.788057e-50 | -8.615850e-47 |
| Msa0479270 | Msa1078170 | 0.800923 | 1.147429e-48 | -8.615850e-47 |
| Msa0479270 | Msa1081930 | 0.818647 | 1.757486e-52 | -8.615850e-47 |
| Msa0479270 | Msa1089320 | 0.818671 | 1.735649e-52 | -8.615850e-47 |
| Msa0479270 | Msa1114410 | 0.806627 | 7.505044e-50 | -8.615850e-47 |
| Msa0479270 | Msa1126830 | 0.807250 | 5.539900e-50 | -8.615850e-47 |
| Msa0479270 | Msa1165940 | 0.807624 | 4.614874e-50 | -8.615850e-47 |
| Msa0479270 | Msa1201560 | 0.815455 | 9.165243e-52 | -8.615850e-47 |
| Msa0479270 | Msa1204530 | 0.806662 | 7.377476e-50 | -8.615850e-47 |
| Msa0479270 | Msa1205590 | 0.802785 | 4.756778e-49 | -8.615850e-47 |
| Msa0479270 | Msa1206650 | 0.810594 | 1.066576e-50 | -8.615850e-47 |
| Msa0479270 | Msa1244600 | 0.819504 | 1.121810e-52 | -8.615850e-47 |
| Msa0479270 | Msa1250530 | 0.821603 | 3.698401e-53 | -8.615850e-47 |
| Msa0479270 | Msa1254730 | 0.839921 | 1.186604e-57 | -8.615850e-47 |
| Msa0479270 | Msa1294820 | 0.811368 | 7.248919e-51 | -8.615850e-47 |
| Msa0479270 | Msa1295930 | 0.815345 | 9.696904e-52 | -8.615850e-47 |
| Msa0479270 | Msa1305340 | 0.804976 | 1.667812e-49 | -8.615850e-47 |
| Msa0479270 | Msa1305660 | 0.804916 | 1.716435e-49 | -8.615850e-47 |
| Msa0479270 | Msa1305710 | 0.828612 | 8.160226e-55 | -8.615850e-47 |
| Msa0479270 | Msa1307180 | 0.829512 | 4.937816e-55 | -8.615850e-47 |
| Msa0479270 | Msa1316360 | 0.831748 | 1.400127e-55 | -8.615850e-47 |
| Msa0479270 | Msa1331320 | 0.817711 | 2.861584e-52 | -8.615850e-47 |
| Msa0479270 | Msa1336560 | 0.845670 | 3.513855e-59 | -8.615850e-47 |
| Msa0479270 | Msa1341060 | 0.809981 | 1.446429e-50 | -8.615850e-47 |
| Msa0479270 | Msa1360140 | 0.802007 | 6.880079e-49 | -8.615850e-47 |
| Msa0479270 | Msa1362420 | 0.832093 | 1.150681e-55 | -8.615850e-47 |
| Msa0479270 | Msa1364210 | 0.821753 | 3.414767e-53 | -8.615850e-47 |
| Msa0479270 | Msa1367590 | 0.810454 | 1.143379e-50 | -8.615850e-47 |
| Msa0479270 | Msa1376650 | 0.814918 | 1.206276e-51 | -8.615850e-47 |
| Msa0479270 | Msa1382020 | 0.805165 | 1.522962e-49 | -8.615850e-47 |
| Msa0479270 | Msa1397120 | 0.809593 | 1.752734e-50 | -8.615850e-47 |
| Msa0479270 | Msa1403890 | 0.810676 | 1.023757e-50 | -8.615850e-47 |
| Msa0479270 | Msa1407600 | 0.810837 | 9.450722e-51 | -8.615850e-47 |
| Msa0479270 | Msa1419640 | 0.825039 | 5.825686e-54 | -8.615850e-47 |
| Msa0479270 | Msa1419870 | 0.805653 | 1.203230e-49 | -8.615850e-47 |
| Msa0479270 | Msa1433390 | 0.820274 | 7.478529e-53 | -8.615850e-47 |
| Msa0479270 | Msa1434420 | -0.851064 | 1.131729e-60 | -8.615850e-47 |
| Msa0479270 | Msa1440190 | 0.808278 | 3.350370e-50 | -8.615850e-47 |
| Msa0479270 | Msa1447890 | 0.802585 | 5.231596e-49 | -8.615850e-47 |
| Msa0479270 | Msa1449750 | 0.807098 | 5.967283e-50 | -8.615850e-47 |
| Msa0479270 | Msa1451560 | 0.811643 | 6.319613e-51 | -8.615850e-47 |
| Msa0479270 | Msa1458610 | 0.814288 | 1.663010e-51 | -8.615850e-47 |
| Msa0479270 | Msa1461280 | 0.807341 | 5.300720e-50 | -8.615850e-47 |
| Msa0479270 | Msa1462290 | 0.808754 | 2.651368e-50 | -8.615850e-47 |
| Msa0249860 | Msa0479270 | 0.805578 | 1.247833e-49 | -8.615850e-47 |
| Msa0257490 | Msa0479270 | 0.830973 | 2.171335e-55 | -8.615850e-47 |
| Msa0272300 | Msa0479270 | 0.808105 | 3.646314e-50 | -8.615850e-47 |
| Msa0285330 | Msa0479270 | 0.808521 | 2.973320e-50 | -8.615850e-47 |
| Msa0287410 | Msa0479270 | 0.806436 | 8.233004e-50 | -8.615850e-47 |
| Msa0291500 | Msa0479270 | 0.831286 | 1.818951e-55 | -8.615850e-47 |
| Msa0296790 | Msa0479270 | 0.818690 | 1.718599e-52 | -8.615850e-47 |
| Msa0296920 | Msa0479270 | 0.817962 | 2.512013e-52 | -8.615850e-47 |
| Msa0305410 | Msa0479270 | 0.806173 | 9.352851e-50 | -8.615850e-47 |
| Msa0311720 | Msa0479270 | 0.811942 | 5.440006e-51 | -8.615850e-47 |
| Msa0315440 | Msa0479270 | -0.802654 | 5.062278e-49 | -8.615850e-47 |
| Msa0321690 | Msa0479270 | 0.808937 | 2.423327e-50 | -8.615850e-47 |
| Msa0323560 | Msa0479270 | 0.813284 | 2.766607e-51 | -8.615850e-47 |
| Msa0346430 | Msa0479270 | 0.817056 | 4.018424e-52 | -8.615850e-47 |
| Msa0363640 | Msa0479270 | 0.809217 | 2.109897e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479270 | MtrunA17_Chr3g0142051 | 99.145 | 117 | 1 | 0 | 1 | 117 | 1 | 117 | 3.26e-81 | 233 |
| Msa0479270 | MtrunA17_Chr1g0155721 | 83.036 | 112 | 19 | 0 | 1 | 112 | 1 | 112 | 3.71e-66 | 195 |
| Msa0479270 | MtrunA17_Chr5g0404831 | 67.544 | 114 | 37 | 0 | 2 | 115 | 4 | 117 | 1.19e-55 | 169 |
| Msa0479270 | MtrunA17_Chr7g0216481 | 50.495 | 101 | 50 | 0 | 12 | 112 | 32 | 132 | 4.51e-35 | 117 |
| Msa0479270 | MtrunA17_Chr8g0393201 | 48.214 | 112 | 58 | 0 | 2 | 113 | 223 | 334 | 6.70e-34 | 119 |
| Msa0479270 | MtrunA17_Chr8g0334481 | 42.308 | 104 | 60 | 0 | 6 | 109 | 26 | 129 | 1.67e-32 | 111 |
| Msa0479270 | MtrunA17_Chr5g0415771 | 49.550 | 111 | 56 | 0 | 2 | 112 | 15 | 125 | 1.31e-30 | 105 |
| Msa0479270 | MtrunA17_Chr7g0245141 | 44.554 | 101 | 56 | 0 | 6 | 106 | 24 | 124 | 1.64e-29 | 103 |
| Msa0479270 | MtrunA17_Chr5g0415761 | 45.794 | 107 | 58 | 0 | 6 | 112 | 20 | 126 | 4.95e-28 | 99.4 |
| Msa0479270 | MtrunA17_Chr5g0415741 | 46.364 | 110 | 59 | 0 | 2 | 111 | 14 | 123 | 4.32e-27 | 97.1 |
| Msa0479270 | MtrunA17_Chr2g0280411 | 40.952 | 105 | 62 | 0 | 5 | 109 | 8 | 112 | 1.14e-25 | 93.2 |
| Msa0479270 | MtrunA17_Chr2g0319291 | 34.906 | 106 | 69 | 0 | 4 | 109 | 8 | 113 | 4.03e-22 | 84.3 |
| Msa0479270 | MtrunA17_Chr4g0052481 | 38.000 | 100 | 60 | 1 | 9 | 106 | 62 | 161 | 5.57e-21 | 82.4 |
| Msa0479270 | MtrunA17_Chr4g0042051 | 34.951 | 103 | 67 | 0 | 4 | 106 | 8 | 110 | 2.06e-20 | 80.1 |
| Msa0479270 | MtrunA17_Chr1g0201781 | 38.158 | 76 | 46 | 1 | 26 | 100 | 76 | 151 | 3.27e-18 | 75.5 |
| Msa0479270 | MtrunA17_Chr3g0142031 | 76.190 | 42 | 10 | 0 | 61 | 102 | 4 | 45 | 1.15e-17 | 70.9 |
| Msa0479270 | MtrunA17_Chr3g0125821 | 35.398 | 113 | 68 | 3 | 2 | 112 | 63 | 172 | 2.19e-17 | 73.6 |
| Msa0479270 | MtrunA17_Chr7g0249461 | 39.048 | 105 | 60 | 2 | 6 | 109 | 79 | 180 | 2.05e-16 | 71.2 |
| Msa0479270 | MtrunA17_Chr3g0133941 | 38.679 | 106 | 55 | 3 | 21 | 117 | 109 | 213 | 8.21e-15 | 67.4 |
| Msa0479270 | MtrunA17_Chr7g0264661 | 32.184 | 87 | 57 | 1 | 27 | 113 | 44 | 128 | 9.70e-15 | 65.5 |
| Msa0479270 | MtrunA17_Chr2g0317731 | 40.000 | 75 | 44 | 1 | 27 | 100 | 85 | 159 | 2.11e-14 | 65.5 |
| Msa0479270 | MtrunA17_Chr6g0488561 | 30.357 | 112 | 73 | 3 | 6 | 114 | 75 | 184 | 3.49e-13 | 63.2 |
| Msa0479270 | MtrunA17_Chr1g0211871 | 37.209 | 86 | 47 | 3 | 27 | 111 | 85 | 164 | 4.15e-13 | 62.4 |
| Msa0479270 | MtrunA17_Chr8g0360031 | 35.632 | 87 | 54 | 2 | 27 | 111 | 88 | 174 | 5.08e-13 | 62.0 |
| Msa0479270 | MtrunA17_Chr3g0092051 | 32.258 | 93 | 60 | 2 | 25 | 114 | 104 | 196 | 7.55e-13 | 62.8 |
| Msa0479270 | MtrunA17_Chr4g0047431 | 34.146 | 82 | 54 | 0 | 32 | 113 | 25 | 106 | 5.75e-12 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479270 | AT3G51030.1 | 72.321 | 112 | 31 | 0 | 1 | 112 | 1 | 112 | 4.21e-60 | 180 |
| Msa0479270 | AT1G45145.1 | 59.459 | 111 | 45 | 0 | 3 | 113 | 2 | 112 | 3.69e-48 | 150 |
| Msa0479270 | AT1G19730.1 | 62.832 | 113 | 41 | 1 | 1 | 112 | 1 | 113 | 4.62e-47 | 147 |
| Msa0479270 | AT5G42980.1 | 62.500 | 112 | 42 | 0 | 3 | 114 | 2 | 113 | 1.15e-46 | 146 |
| Msa0479270 | AT5G39950.1 | 44.037 | 109 | 61 | 0 | 3 | 111 | 22 | 130 | 7.69e-32 | 109 |
| Msa0479270 | AT3G08710.2 | 41.905 | 105 | 61 | 0 | 6 | 110 | 23 | 127 | 8.22e-29 | 102 |
| Msa0479270 | AT3G08710.3 | 41.905 | 105 | 61 | 0 | 6 | 110 | 23 | 127 | 8.22e-29 | 102 |
| Msa0479270 | AT3G08710.1 | 41.905 | 105 | 61 | 0 | 6 | 110 | 23 | 127 | 8.22e-29 | 102 |
| Msa0479270 | AT3G56420.1 | 41.346 | 104 | 61 | 0 | 3 | 106 | 37 | 140 | 1.18e-28 | 102 |
| Msa0479270 | AT3G56420.2 | 41.346 | 104 | 61 | 0 | 3 | 106 | 37 | 140 | 1.18e-28 | 102 |
| Msa0479270 | AT3G56420.3 | 41.346 | 104 | 61 | 0 | 3 | 106 | 37 | 140 | 1.18e-28 | 102 |
| Msa0479270 | AT3G17880.2 | 38.596 | 114 | 70 | 0 | 2 | 115 | 259 | 372 | 3.16e-27 | 103 |
| Msa0479270 | AT3G17880.1 | 38.596 | 114 | 70 | 0 | 2 | 115 | 266 | 379 | 3.19e-27 | 103 |
| Msa0479270 | AT1G59730.1 | 40.741 | 108 | 64 | 0 | 5 | 112 | 20 | 127 | 3.97e-27 | 97.4 |
| Msa0479270 | AT2G40790.2 | 42.157 | 102 | 59 | 0 | 5 | 106 | 39 | 140 | 2.00e-25 | 94.0 |
| Msa0479270 | AT2G40790.1 | 42.157 | 102 | 59 | 0 | 5 | 106 | 39 | 140 | 2.00e-25 | 94.0 |
| Msa0479270 | AT1G69880.1 | 36.111 | 108 | 69 | 0 | 8 | 115 | 39 | 146 | 3.23e-24 | 90.5 |
| Msa0479270 | AT1G11530.1 | 39.604 | 101 | 61 | 0 | 6 | 106 | 2 | 102 | 3.28e-22 | 84.7 |
| Msa0479270 | AT2G35010.2 | 37.383 | 107 | 65 | 1 | 2 | 106 | 80 | 186 | 1.20e-18 | 77.4 |
| Msa0479270 | AT2G35010.1 | 37.383 | 107 | 65 | 1 | 2 | 106 | 80 | 186 | 1.20e-18 | 77.4 |
| Msa0479270 | AT1G43560.1 | 35.556 | 90 | 54 | 2 | 12 | 100 | 63 | 149 | 6.94e-18 | 74.7 |
| Msa0479270 | AT1G76760.1 | 36.842 | 76 | 47 | 1 | 26 | 100 | 79 | 154 | 2.40e-17 | 73.6 |
| Msa0479270 | AT5G16400.1 | 42.683 | 82 | 46 | 1 | 29 | 109 | 98 | 179 | 4.19e-17 | 73.2 |
| Msa0479270 | AT3G02730.1 | 39.048 | 105 | 60 | 3 | 6 | 109 | 68 | 169 | 2.33e-16 | 71.2 |
| Msa0479270 | AT1G31020.1 | 41.250 | 80 | 45 | 1 | 32 | 109 | 75 | 154 | 1.10e-15 | 68.9 |
| Msa0479270 | AT4G26160.1 | 36.782 | 87 | 52 | 2 | 29 | 112 | 114 | 200 | 1.08e-14 | 67.8 |
| Msa0479270 | AT1G07700.1 | 34.286 | 105 | 61 | 2 | 21 | 117 | 100 | 204 | 2.39e-13 | 63.9 |
| Msa0479270 | AT1G07700.4 | 34.286 | 105 | 61 | 2 | 21 | 117 | 100 | 204 | 2.39e-13 | 63.9 |
| Msa0479270 | AT1G07700.2 | 34.286 | 105 | 61 | 2 | 21 | 117 | 100 | 204 | 2.39e-13 | 63.9 |
| Msa0479270 | AT3G15360.1 | 34.940 | 83 | 52 | 2 | 31 | 111 | 107 | 189 | 3.58e-13 | 63.2 |
| Msa0479270 | AT1G07700.3 | 34.286 | 105 | 61 | 2 | 21 | 117 | 113 | 217 | 5.50e-13 | 63.2 |
| Msa0479270 | AT1G03680.1 | 36.145 | 83 | 51 | 2 | 31 | 111 | 95 | 177 | 7.30e-13 | 62.0 |
| Msa0479270 | AT5G61440.1 | 33.333 | 93 | 59 | 2 | 25 | 114 | 102 | 194 | 1.82e-12 | 62.0 |
| Msa0479270 | AT4G32580.1 | 30.851 | 94 | 65 | 0 | 18 | 111 | 11 | 104 | 4.35e-12 | 59.7 |
| Msa0479270 | AT5G61440.2 | 36.986 | 73 | 44 | 1 | 25 | 95 | 102 | 174 | 6.93e-12 | 59.7 |
| Msa0479270 | AT4G03520.1 | 30.357 | 112 | 73 | 3 | 2 | 111 | 75 | 183 | 1.19e-11 | 58.9 |
| Msa0479270 | AT3G53220.1 | 29.545 | 88 | 60 | 1 | 26 | 113 | 41 | 126 | 1.21e-11 | 57.8 |
| Msa0479270 | AT4G04950.1 | 31.250 | 96 | 66 | 0 | 18 | 113 | 11 | 106 | 3.09e-11 | 59.3 |
| Msa0479270 | AT4G29670.1 | 30.631 | 111 | 72 | 4 | 7 | 114 | 104 | 212 | 4.00e-11 | 58.2 |
Find 66 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGCAATCTCTGCCAAAAT+TGG | 0.176845 | 3_3:+84199160 | None:intergenic |
| CCGTTTCATTGCCCCAATTT+TGG | 0.206429 | 3_3:-84199173 | Msa0479270:CDS |
| TTATCAGAATCACGAATATT+TGG | 0.221502 | 3_3:+84198454 | None:intergenic |
| AATTTAGAATCTTTAGAATA+TGG | 0.277669 | 3_3:-84198739 | Msa0479270:three_prime_UTR |
| GTAATTACGAACCAGTTTCT+TGG | 0.284749 | 3_3:+84200361 | None:intergenic |
| AACAGACTCGAATTAGAAAA+TGG | 0.291388 | 3_3:+84198809 | None:intergenic |
| TAGTTGATTTCACCGCTTCT+TGG | 0.325324 | 3_3:-84199207 | Msa0479270:CDS |
| TGATAAGTGGAAGTAAGTTT+TGG | 0.361870 | 3_3:-84198437 | Msa0479270:three_prime_UTR |
| TCCATGGACCCTCTTTAGAT+TGG | 0.365829 | 3_3:-84198546 | Msa0479270:three_prime_UTR |
| TAGCAATCTCTGCCAAAATT+GGG | 0.369203 | 3_3:+84199161 | None:intergenic |
| CAGTTTACCTGGTTTCAGTA+TGG | 0.382511 | 3_3:-84198767 | Msa0479270:three_prime_UTR |
| AATGCAAGTTAGTTGTTCAT+TGG | 0.392155 | 3_3:+84198667 | None:intergenic |
| TCTTATTCTTATTGCTGTCC+TGG | 0.394387 | 3_3:-84198597 | Msa0479270:three_prime_UTR |
| CCATGGACCCTCTTTAGATT+GGG | 0.398812 | 3_3:-84198545 | Msa0479270:three_prime_UTR |
| CACGAATATTTGGCAATTGT+CGG | 0.407893 | 3_3:+84198464 | None:intergenic |
| ACCTTGAGGAAGGTGACATT+GGG | 0.411403 | 3_3:+84199130 | None:intergenic |
| GAACACCTCGAGAAGGGAAA+TGG | 0.415243 | 3_3:-84200386 | Msa0479270:CDS |
| ATATAAGAAAATTGAAGCTT+GGG | 0.417448 | 3_3:+84198519 | None:intergenic |
| TACCTGGTTTCAGTATGGTT+TGG | 0.427316 | 3_3:-84198762 | Msa0479270:three_prime_UTR |
| AATATAAGAAAATTGAAGCT+TGG | 0.445737 | 3_3:+84198518 | None:intergenic |
| GGGAAATGGATCCAAGAAAC+TGG | 0.447832 | 3_3:-84200372 | Msa0479270:intron |
| CCAAAATTGGGGCAATGAAA+CGG | 0.448396 | 3_3:+84199173 | None:intergenic |
| TAGAATCTTTAGAATATGGC+TGG | 0.452697 | 3_3:-84198735 | Msa0479270:three_prime_UTR |
| ACATTCCTGTTCTTGAAAGA+AGG | 0.467029 | 3_3:-84198931 | Msa0479270:CDS |
| ATGCAACTACTGATGCTTGA+AGG | 0.470064 | 3_3:-84198846 | Msa0479270:exon |
| TTCAGACTGTTGCTGAGGAG+TGG | 0.473458 | 3_3:-84198972 | Msa0479270:intron |
| CTTATTAGATTATCCATCCA+TGG | 0.477496 | 3_3:-84198562 | Msa0479270:three_prime_UTR |
| TCAGACTGTTGCTGAGGAGT+GGG | 0.483366 | 3_3:-84198971 | Msa0479270:intron |
| CAAGGTTGTTGGTGCTCAGA+AGG | 0.494072 | 3_3:-84198896 | Msa0479270:CDS |
| TCTTTAGAATATGGCTGGAT+AGG | 0.499604 | 3_3:-84198730 | Msa0479270:three_prime_UTR |
| AACCTTGAGGAAGGTGACAT+TGG | 0.503335 | 3_3:+84199129 | None:intergenic |
| GCTATTCGAGTCAGTTTACC+TGG | 0.511990 | 3_3:-84198778 | Msa0479270:three_prime_UTR |
| GAGTTCACACTGTGGAGGCT+TGG | 0.518585 | 3_3:-84200412 | Msa0479270:CDS |
| TCACACTGTGGAGGCTTGGA+AGG | 0.528778 | 3_3:-84200408 | Msa0479270:CDS |
| TGGACCCTCTTTAGATTGGG+TGG | 0.530356 | 3_3:-84198542 | Msa0479270:three_prime_UTR |
| ATATTCGTGATTCTGATAAG+TGG | 0.532086 | 3_3:-84198450 | Msa0479270:three_prime_UTR |
| TCTTTCAAGAACAGGAATGT+TGG | 0.532437 | 3_3:+84198934 | None:intergenic |
| GATTTCACCGCTTCTTGGTG+TGG | 0.537233 | 3_3:-84199202 | Msa0479270:CDS |
| GGTTGATGTTGATGAATTGA+AGG | 0.538032 | 3_3:-84199110 | Msa0479270:intron |
| CCCAATCTAAAGAGGGTCCA+TGG | 0.539117 | 3_3:+84198545 | None:intergenic |
| ATCTAAAGAGGGTCCATGGA+TGG | 0.540917 | 3_3:+84198549 | None:intergenic |
| AAACTTGTGGACAAGGTTGT+TGG | 0.545501 | 3_3:-84198907 | Msa0479270:CDS |
| AATAAGAAAATAGTAATGCC+AGG | 0.546795 | 3_3:+84198579 | None:intergenic |
| TGCAACTACTGATGCTTGAA+GGG | 0.547413 | 3_3:-84198845 | Msa0479270:exon |
| TGGATCCATTTCCCTTCTCG+AGG | 0.549771 | 3_3:+84200381 | None:intergenic |
| AGCAATCTCTGCCAAAATTG+GGG | 0.564435 | 3_3:+84199162 | None:intergenic |
| TTGGGCCACCCAATCTAAAG+AGG | 0.565596 | 3_3:+84198537 | None:intergenic |
| GCAGAAGAGGGACAAGTGAT+CGG | 0.567124 | 3_3:-84200434 | Msa0479270:CDS |
| ATCTCTTCAGACTGTTGCTG+AGG | 0.574853 | 3_3:-84198977 | Msa0479270:intron |
| GCCCAATGTCACCTTCCTCA+AGG | 0.579615 | 3_3:-84199131 | Msa0479270:CDS |
| AGAAGGAAAACTTGTGGACA+AGG | 0.582680 | 3_3:-84198914 | Msa0479270:CDS |
| TTGGGGCAATGAAACGGCAC+GGG | 0.587094 | 3_3:+84199179 | None:intergenic |
| TTGGAAGGAACACCTCGAGA+AGG | 0.587167 | 3_3:-84200393 | Msa0479270:CDS |
| ATCAACATCAACCTTGAGGA+AGG | 0.593122 | 3_3:+84199120 | None:intergenic |
| TGGAAGGAACACCTCGAGAA+GGG | 0.609279 | 3_3:-84200392 | Msa0479270:CDS |
| ATTGGGGCAATGAAACGGCA+CGG | 0.611827 | 3_3:+84199178 | None:intergenic |
| GCACGGGCCACACCAAGAAG+CGG | 0.614346 | 3_3:+84199195 | None:intergenic |
| CTTGAAAGAAGGAAAACTTG+TGG | 0.616269 | 3_3:-84198920 | Msa0479270:CDS |
| ACAACTAACTTGCATTAGCA+AGG | 0.623127 | 3_3:-84198660 | Msa0479270:three_prime_UTR |
| ATTCATCAACATCAACCTTG+AGG | 0.626748 | 3_3:+84199116 | None:intergenic |
| TGGGCCACCCAATCTAAAGA+GGG | 0.656072 | 3_3:+84198538 | None:intergenic |
| GATCACTTGTCCCTCTTCTG+CGG | 0.658362 | 3_3:+84200436 | None:intergenic |
| TTCCAAACCATACTGAAACC+AGG | 0.659407 | 3_3:+84198760 | None:intergenic |
| AGGTGAATAAAATCGTTGTG+TGG | 0.672586 | 3_3:-84198710 | Msa0479270:three_prime_UTR |
| GATCGGAGTTCACACTGTGG+AGG | 0.679680 | 3_3:-84200417 | Msa0479270:CDS |
| AGTGATCGGAGTTCACACTG+TGG | 0.799746 | 3_3:-84200420 | Msa0479270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGATTATTATTATTATTC+TGG | - | chr3_3:84198690-84198709 | Msa0479270:three_prime_UTR | 10.0% |
| !!! | TTTTCATATTAGTATAAATA+AGG | - | chr3_3:84199171-84199190 | Msa0479270:CDS | 10.0% |
| !! | TTTCATATTAGTATAAATAA+GGG | - | chr3_3:84199172-84199191 | Msa0479270:CDS | 10.0% |
| !! | ATTGATTATTATTATTATTC+TGG | - | chr3_3:84198690-84198709 | Msa0479270:three_prime_UTR | 10.0% |
| !!! | TTTTCATATTAGTATAAATA+AGG | - | chr3_3:84199171-84199190 | Msa0479270:CDS | 10.0% |
| !! | TTTCATATTAGTATAAATAA+GGG | - | chr3_3:84199172-84199191 | Msa0479270:CDS | 10.0% |
| !! | TCTAATATTAGTACAAATAA+GGG | - | chr3_3:84199319-84199338 | Msa0479270:intron | 15.0% |
| !!! | AATTTAGAATCTTTAGAATA+TGG | - | chr3_3:84200185-84200204 | Msa0479270:intron | 15.0% |
| !! | TCTAATATTAGTACAAATAA+GGG | - | chr3_3:84199319-84199338 | Msa0479270:intron | 15.0% |
| !!! | AATTTAGAATCTTTAGAATA+TGG | - | chr3_3:84200185-84200204 | Msa0479270:intron | 15.0% |
| !!! | CAATGAATAACTTATGTTTT+TGG | + | chr3_3:84198982-84199001 | None:intergenic | 20.0% |
| !!! | TGTTGAAATTTTAAGAAATG+AGG | - | chr3_3:84199095-84199114 | Msa0479270:intron | 20.0% |
| !!! | TTGATACTTAGTTTAGAATT+TGG | - | chr3_3:84199294-84199313 | Msa0479270:intron | 20.0% |
| !! | GTCTAATATTAGTACAAATA+AGG | - | chr3_3:84199318-84199337 | Msa0479270:intron | 20.0% |
| !!! | ATGTTTTAAGATAAAGAGAA+CGG | + | chr3_3:84199398-84199417 | None:intergenic | 20.0% |
| !!! | TTCAGCAAATTACTTTTTAA+CGG | - | chr3_3:84199450-84199469 | Msa0479270:intron | 20.0% |
| !! | TAAAACAAAGATTTGACATA+AGG | + | chr3_3:84199549-84199568 | None:intergenic | 20.0% |
| !!! | GTGAAAAATCAAGAATTTTA+AGG | + | chr3_3:84199643-84199662 | None:intergenic | 20.0% |
| !!! | TGAACTTGTTTAAAATTAAG+TGG | + | chr3_3:84199665-84199684 | None:intergenic | 20.0% |
| !! | AAAACAATAATAATGTCATG+TGG | + | chr3_3:84199858-84199877 | None:intergenic | 20.0% |
| !! | ATATAAGAAAATTGAAGCTT+GGG | + | chr3_3:84200408-84200427 | None:intergenic | 20.0% |
| !! | AATATAAGAAAATTGAAGCT+TGG | + | chr3_3:84200409-84200428 | None:intergenic | 20.0% |
| !!! | CAATGAATAACTTATGTTTT+TGG | + | chr3_3:84198982-84199001 | None:intergenic | 20.0% |
| !!! | TGTTGAAATTTTAAGAAATG+AGG | - | chr3_3:84199095-84199114 | Msa0479270:intron | 20.0% |
| !!! | TTGATACTTAGTTTAGAATT+TGG | - | chr3_3:84199294-84199313 | Msa0479270:intron | 20.0% |
| !! | GTCTAATATTAGTACAAATA+AGG | - | chr3_3:84199318-84199337 | Msa0479270:intron | 20.0% |
| !!! | ATGTTTTAAGATAAAGAGAA+CGG | + | chr3_3:84199398-84199417 | None:intergenic | 20.0% |
| !!! | TTCAGCAAATTACTTTTTAA+CGG | - | chr3_3:84199450-84199469 | Msa0479270:intron | 20.0% |
| !! | TAAAACAAAGATTTGACATA+AGG | + | chr3_3:84199549-84199568 | None:intergenic | 20.0% |
| !!! | GTGAAAAATCAAGAATTTTA+AGG | + | chr3_3:84199643-84199662 | None:intergenic | 20.0% |
| !!! | TGAACTTGTTTAAAATTAAG+TGG | + | chr3_3:84199665-84199684 | None:intergenic | 20.0% |
| !! | AAAACAATAATAATGTCATG+TGG | + | chr3_3:84199858-84199877 | None:intergenic | 20.0% |
| !! | ATATAAGAAAATTGAAGCTT+GGG | + | chr3_3:84200408-84200427 | None:intergenic | 20.0% |
| !! | AATATAAGAAAATTGAAGCT+TGG | + | chr3_3:84200409-84200428 | None:intergenic | 20.0% |
| !! | TTTTCCATTTCCTTAGTTTA+GGG | - | chr3_3:84198636-84198655 | Msa0479270:three_prime_UTR | 25.0% |
| ! | TGTGAATTTAATCCTTCAAT+TGG | - | chr3_3:84198724-84198743 | Msa0479270:three_prime_UTR | 25.0% |
| ! | TAAATAATGATTGAGTGCAT+AGG | - | chr3_3:84198754-84198773 | Msa0479270:three_prime_UTR | 25.0% |
| ! | AAATAATGATTGAGTGCATA+GGG | - | chr3_3:84198755-84198774 | Msa0479270:three_prime_UTR | 25.0% |
| ! | GAGCAAAAGAATGTTTAAAA+TGG | - | chr3_3:84198882-84198901 | Msa0479270:CDS | 25.0% |
| !! | ATTCTGTTTGTCAACTTTTT+CGG | - | chr3_3:84198912-84198931 | Msa0479270:CDS | 25.0% |
| !!! | ATTTAAGGGTTTTAAGTTAG+AGG | - | chr3_3:84199051-84199070 | Msa0479270:intron | 25.0% |
| ! | AGGATTAAGTGAATATTGTT+GGG | - | chr3_3:84199115-84199134 | Msa0479270:CDS | 25.0% |
| ! | ACTTAATCTTCAATGATTAC+TGG | - | chr3_3:84199505-84199524 | Msa0479270:intron | 25.0% |
| ! | AAAAGAAATCGTAAAGCTTT+AGG | + | chr3_3:84199892-84199911 | None:intergenic | 25.0% |
| ! | TAAGTTAATTGCAGAATTCT+TGG | + | chr3_3:84199922-84199941 | None:intergenic | 25.0% |
| ! | AATAAGAAAATAGTAATGCC+AGG | + | chr3_3:84200348-84200367 | None:intergenic | 25.0% |
| ! | TTATCAGAATCACGAATATT+TGG | + | chr3_3:84200473-84200492 | None:intergenic | 25.0% |
| !! | TTTTCCATTTCCTTAGTTTA+GGG | - | chr3_3:84198636-84198655 | Msa0479270:three_prime_UTR | 25.0% |
| ! | TGTGAATTTAATCCTTCAAT+TGG | - | chr3_3:84198724-84198743 | Msa0479270:three_prime_UTR | 25.0% |
| ! | TAAATAATGATTGAGTGCAT+AGG | - | chr3_3:84198754-84198773 | Msa0479270:three_prime_UTR | 25.0% |
| ! | AAATAATGATTGAGTGCATA+GGG | - | chr3_3:84198755-84198774 | Msa0479270:three_prime_UTR | 25.0% |
| ! | GAGCAAAAGAATGTTTAAAA+TGG | - | chr3_3:84198882-84198901 | Msa0479270:CDS | 25.0% |
| !! | ATTCTGTTTGTCAACTTTTT+CGG | - | chr3_3:84198912-84198931 | Msa0479270:CDS | 25.0% |
| !!! | ATTTAAGGGTTTTAAGTTAG+AGG | - | chr3_3:84199051-84199070 | Msa0479270:intron | 25.0% |
| ! | AGGATTAAGTGAATATTGTT+GGG | - | chr3_3:84199115-84199134 | Msa0479270:CDS | 25.0% |
| ! | ACTTAATCTTCAATGATTAC+TGG | - | chr3_3:84199505-84199524 | Msa0479270:intron | 25.0% |
| ! | AAAAGAAATCGTAAAGCTTT+AGG | + | chr3_3:84199892-84199911 | None:intergenic | 25.0% |
| ! | TAAGTTAATTGCAGAATTCT+TGG | + | chr3_3:84199922-84199941 | None:intergenic | 25.0% |
| ! | AATAAGAAAATAGTAATGCC+AGG | + | chr3_3:84200348-84200367 | None:intergenic | 25.0% |
| ! | TTATCAGAATCACGAATATT+TGG | + | chr3_3:84200473-84200492 | None:intergenic | 25.0% |
| TGTACGAAGAAAGAGAAAAA+TGG | - | chr3_3:84198465-84198484 | Msa0479270:three_prime_UTR | 30.0% | |
| ! | GTTTTCCATTTCCTTAGTTT+AGG | - | chr3_3:84198635-84198654 | Msa0479270:three_prime_UTR | 30.0% |
| ACAATTAGATCCCTAAACTA+AGG | + | chr3_3:84198649-84198668 | None:intergenic | 30.0% | |
| AGTTTAGGGATCTAATTGTT+AGG | - | chr3_3:84198650-84198669 | Msa0479270:three_prime_UTR | 30.0% | |
| GTTTAGGGATCTAATTGTTA+GGG | - | chr3_3:84198651-84198670 | Msa0479270:three_prime_UTR | 30.0% | |
| ATTTAGTGTCATCCAATTGA+AGG | + | chr3_3:84198739-84198758 | None:intergenic | 30.0% | |
| CATTTCATAGCTTAGAACTT+CGG | - | chr3_3:84198805-84198824 | Msa0479270:three_prime_UTR | 30.0% | |
| ATTTCATAGCTTAGAACTTC+GGG | - | chr3_3:84198806-84198825 | Msa0479270:three_prime_UTR | 30.0% | |
| GAGGATTAAGTGAATATTGT+TGG | - | chr3_3:84199114-84199133 | Msa0479270:CDS | 30.0% | |
| ! | GAGACAAAATTTGCTCATTA+GGG | - | chr3_3:84199137-84199156 | Msa0479270:CDS | 30.0% |
| ! | AGTTGATATGAAATAACAGC+TGG | + | chr3_3:84199431-84199450 | None:intergenic | 30.0% |
| ATCATTGAAGATTAAGTGTC+AGG | + | chr3_3:84199502-84199521 | None:intergenic | 30.0% | |
| ATTGAATATTGTAGCCTCTT+CGG | - | chr3_3:84199603-84199622 | Msa0479270:intron | 30.0% | |
| AATCACAAATTATACCGAAG+AGG | + | chr3_3:84199620-84199639 | None:intergenic | 30.0% | |
| AACAGACTCGAATTAGAAAA+TGG | + | chr3_3:84200118-84200137 | None:intergenic | 30.0% | |
| !! | TAGAATCTTTAGAATATGGC+TGG | - | chr3_3:84200189-84200208 | Msa0479270:intron | 30.0% |
| AATGCAAGTTAGTTGTTCAT+TGG | + | chr3_3:84200260-84200279 | None:intergenic | 30.0% | |
| CTTATTAGATTATCCATCCA+TGG | - | chr3_3:84200362-84200381 | Msa0479270:intron | 30.0% | |
| ATATTCGTGATTCTGATAAG+TGG | - | chr3_3:84200474-84200493 | Msa0479270:five_prime_UTR | 30.0% | |
| ! | TGATAAGTGGAAGTAAGTTT+TGG | - | chr3_3:84200487-84200506 | Msa0479270:five_prime_UTR | 30.0% |
| TGTACGAAGAAAGAGAAAAA+TGG | - | chr3_3:84198465-84198484 | Msa0479270:three_prime_UTR | 30.0% | |
| ! | GTTTTCCATTTCCTTAGTTT+AGG | - | chr3_3:84198635-84198654 | Msa0479270:three_prime_UTR | 30.0% |
| ACAATTAGATCCCTAAACTA+AGG | + | chr3_3:84198649-84198668 | None:intergenic | 30.0% | |
| AGTTTAGGGATCTAATTGTT+AGG | - | chr3_3:84198650-84198669 | Msa0479270:three_prime_UTR | 30.0% | |
| GTTTAGGGATCTAATTGTTA+GGG | - | chr3_3:84198651-84198670 | Msa0479270:three_prime_UTR | 30.0% | |
| ATTTAGTGTCATCCAATTGA+AGG | + | chr3_3:84198739-84198758 | None:intergenic | 30.0% | |
| CATTTCATAGCTTAGAACTT+CGG | - | chr3_3:84198805-84198824 | Msa0479270:three_prime_UTR | 30.0% | |
| ATTTCATAGCTTAGAACTTC+GGG | - | chr3_3:84198806-84198825 | Msa0479270:three_prime_UTR | 30.0% | |
| GAGGATTAAGTGAATATTGT+TGG | - | chr3_3:84199114-84199133 | Msa0479270:CDS | 30.0% | |
| ! | GAGACAAAATTTGCTCATTA+GGG | - | chr3_3:84199137-84199156 | Msa0479270:CDS | 30.0% |
| ! | AGTTGATATGAAATAACAGC+TGG | + | chr3_3:84199431-84199450 | None:intergenic | 30.0% |
| ATCATTGAAGATTAAGTGTC+AGG | + | chr3_3:84199502-84199521 | None:intergenic | 30.0% | |
| ATTGAATATTGTAGCCTCTT+CGG | - | chr3_3:84199603-84199622 | Msa0479270:intron | 30.0% | |
| AATCACAAATTATACCGAAG+AGG | + | chr3_3:84199620-84199639 | None:intergenic | 30.0% | |
| AACAGACTCGAATTAGAAAA+TGG | + | chr3_3:84200118-84200137 | None:intergenic | 30.0% | |
| !! | TAGAATCTTTAGAATATGGC+TGG | - | chr3_3:84200189-84200208 | Msa0479270:intron | 30.0% |
| AATGCAAGTTAGTTGTTCAT+TGG | + | chr3_3:84200260-84200279 | None:intergenic | 30.0% | |
| CTTATTAGATTATCCATCCA+TGG | - | chr3_3:84200362-84200381 | Msa0479270:intron | 30.0% | |
| ATATTCGTGATTCTGATAAG+TGG | - | chr3_3:84200474-84200493 | Msa0479270:five_prime_UTR | 30.0% | |
| GTAATTACGAACCAGTTTCT+TGG | + | chr3_3:84198566-84198585 | None:intergenic | 35.0% | |
| TTCGAAATTAAAACCGCACT+AGG | - | chr3_3:84198612-84198631 | Msa0479270:three_prime_UTR | 35.0% | |
| TCGAAATTAAAACCGCACTA+GGG | - | chr3_3:84198613-84198632 | Msa0479270:three_prime_UTR | 35.0% | |
| AGATCCCTAAACTAAGGAAA+TGG | + | chr3_3:84198643-84198662 | None:intergenic | 35.0% | |
| CAAAACGTGTTGGGATTTAA+GGG | - | chr3_3:84199037-84199056 | Msa0479270:intron | 35.0% | |
| ! | GGAGACAAAATTTGCTCATT+AGG | - | chr3_3:84199136-84199155 | Msa0479270:CDS | 35.0% |
| TATTTGTTCTTAGCCCCATA+AGG | - | chr3_3:84199239-84199258 | Msa0479270:intron | 35.0% | |
| ! | TAACAACAACCAAGCCTTAT+GGG | + | chr3_3:84199256-84199275 | None:intergenic | 35.0% |
| ATAACAACAACCAAGCCTTA+TGG | + | chr3_3:84199257-84199276 | None:intergenic | 35.0% | |
| GAAATACTGTAAGTTCAGGT+TGG | + | chr3_3:84199480-84199499 | None:intergenic | 35.0% | |
| TCAGGAAATACTGTAAGTTC+AGG | + | chr3_3:84199484-84199503 | None:intergenic | 35.0% | |
| TAGCAATCTCTGCCAAAATT+GGG | + | chr3_3:84199766-84199785 | None:intergenic | 35.0% | |
| TTAGCAATCTCTGCCAAAAT+TGG | + | chr3_3:84199767-84199786 | None:intergenic | 35.0% | |
| ATTCATCAACATCAACCTTG+AGG | + | chr3_3:84199811-84199830 | None:intergenic | 35.0% | |
| ! | GGTTGATGTTGATGAATTGA+AGG | - | chr3_3:84199814-84199833 | Msa0479270:intron | 35.0% |
| TCTTTCAAGAACAGGAATGT+TGG | + | chr3_3:84199993-84200012 | None:intergenic | 35.0% | |
| ACATTCCTGTTCTTGAAAGA+AGG | - | chr3_3:84199993-84200012 | Msa0479270:intron | 35.0% | |
| ! | GTTTTCCTTCTTTCAAGAAC+AGG | + | chr3_3:84200001-84200020 | None:intergenic | 35.0% |
| CTTGAAAGAAGGAAAACTTG+TGG | - | chr3_3:84200004-84200023 | Msa0479270:intron | 35.0% | |
| !! | TCTTTAGAATATGGCTGGAT+AGG | - | chr3_3:84200194-84200213 | Msa0479270:intron | 35.0% |
| AGGTGAATAAAATCGTTGTG+TGG | - | chr3_3:84200214-84200233 | Msa0479270:intron | 35.0% | |
| ! | ACAACTAACTTGCATTAGCA+AGG | - | chr3_3:84200264-84200283 | Msa0479270:intron | 35.0% |
| TCTTATTCTTATTGCTGTCC+TGG | - | chr3_3:84200327-84200346 | Msa0479270:intron | 35.0% | |
| CACGAATATTTGGCAATTGT+CGG | + | chr3_3:84200463-84200482 | None:intergenic | 35.0% | |
| GTAATTACGAACCAGTTTCT+TGG | + | chr3_3:84198566-84198585 | None:intergenic | 35.0% | |
| TTCGAAATTAAAACCGCACT+AGG | - | chr3_3:84198612-84198631 | Msa0479270:three_prime_UTR | 35.0% | |
| TCGAAATTAAAACCGCACTA+GGG | - | chr3_3:84198613-84198632 | Msa0479270:three_prime_UTR | 35.0% | |
| AGATCCCTAAACTAAGGAAA+TGG | + | chr3_3:84198643-84198662 | None:intergenic | 35.0% | |
| CAAAACGTGTTGGGATTTAA+GGG | - | chr3_3:84199037-84199056 | Msa0479270:intron | 35.0% | |
| ! | GGAGACAAAATTTGCTCATT+AGG | - | chr3_3:84199136-84199155 | Msa0479270:CDS | 35.0% |
| TATTTGTTCTTAGCCCCATA+AGG | - | chr3_3:84199239-84199258 | Msa0479270:intron | 35.0% | |
| ! | TAACAACAACCAAGCCTTAT+GGG | + | chr3_3:84199256-84199275 | None:intergenic | 35.0% |
| ATAACAACAACCAAGCCTTA+TGG | + | chr3_3:84199257-84199276 | None:intergenic | 35.0% | |
| GAAATACTGTAAGTTCAGGT+TGG | + | chr3_3:84199480-84199499 | None:intergenic | 35.0% | |
| TCAGGAAATACTGTAAGTTC+AGG | + | chr3_3:84199484-84199503 | None:intergenic | 35.0% | |
| TAGCAATCTCTGCCAAAATT+GGG | + | chr3_3:84199766-84199785 | None:intergenic | 35.0% | |
| TTAGCAATCTCTGCCAAAAT+TGG | + | chr3_3:84199767-84199786 | None:intergenic | 35.0% | |
| ATTCATCAACATCAACCTTG+AGG | + | chr3_3:84199811-84199830 | None:intergenic | 35.0% | |
| ! | GGTTGATGTTGATGAATTGA+AGG | - | chr3_3:84199814-84199833 | Msa0479270:intron | 35.0% |
| TCTTTCAAGAACAGGAATGT+TGG | + | chr3_3:84199993-84200012 | None:intergenic | 35.0% | |
| ACATTCCTGTTCTTGAAAGA+AGG | - | chr3_3:84199993-84200012 | Msa0479270:intron | 35.0% | |
| ! | GTTTTCCTTCTTTCAAGAAC+AGG | + | chr3_3:84200001-84200020 | None:intergenic | 35.0% |
| CTTGAAAGAAGGAAAACTTG+TGG | - | chr3_3:84200004-84200023 | Msa0479270:intron | 35.0% | |
| !! | TCTTTAGAATATGGCTGGAT+AGG | - | chr3_3:84200194-84200213 | Msa0479270:intron | 35.0% |
| AGGTGAATAAAATCGTTGTG+TGG | - | chr3_3:84200214-84200233 | Msa0479270:intron | 35.0% | |
| ! | ACAACTAACTTGCATTAGCA+AGG | - | chr3_3:84200264-84200283 | Msa0479270:intron | 35.0% |
| TCTTATTCTTATTGCTGTCC+TGG | - | chr3_3:84200327-84200346 | Msa0479270:intron | 35.0% | |
| CACGAATATTTGGCAATTGT+CGG | + | chr3_3:84200463-84200482 | None:intergenic | 35.0% | |
| ! | AGAACTTCGGGTTTAGAAGA+TGG | - | chr3_3:84198818-84198837 | Msa0479270:three_prime_UTR | 40.0% |
| CATTGAACAACTCATGCATC+TGG | - | chr3_3:84198937-84198956 | Msa0479270:CDS | 40.0% | |
| TAACAGTGACCAAAACGTGT+TGG | - | chr3_3:84199027-84199046 | Msa0479270:intron | 40.0% | |
| AACAGTGACCAAAACGTGTT+GGG | - | chr3_3:84199028-84199047 | Msa0479270:intron | 40.0% | |
| ! | CCTTAAATCCCAACACGTTT+TGG | + | chr3_3:84199039-84199058 | None:intergenic | 40.0% |
| CCAAAACGTGTTGGGATTTA+AGG | - | chr3_3:84199036-84199055 | Msa0479270:intron | 40.0% | |
| ! | AACAACAACCAAGCCTTATG+GGG | + | chr3_3:84199255-84199274 | None:intergenic | 40.0% |
| ! | TAGTTGATTTCACCGCTTCT+TGG | - | chr3_3:84199717-84199736 | Msa0479270:intron | 40.0% |
| CCAAAATTGGGGCAATGAAA+CGG | + | chr3_3:84199754-84199773 | None:intergenic | 40.0% | |
| AGCAATCTCTGCCAAAATTG+GGG | + | chr3_3:84199765-84199784 | None:intergenic | 40.0% | |
| ATCAACATCAACCTTGAGGA+AGG | + | chr3_3:84199807-84199826 | None:intergenic | 40.0% | |
| AGAAGGAAAACTTGTGGACA+AGG | - | chr3_3:84200010-84200029 | Msa0479270:intron | 40.0% | |
| AAACTTGTGGACAAGGTTGT+TGG | - | chr3_3:84200017-84200036 | Msa0479270:intron | 40.0% | |
| ATGCAACTACTGATGCTTGA+AGG | - | chr3_3:84200078-84200097 | Msa0479270:intron | 40.0% | |
| TGCAACTACTGATGCTTGAA+GGG | - | chr3_3:84200079-84200098 | Msa0479270:intron | 40.0% | |
| CAGTTTACCTGGTTTCAGTA+TGG | - | chr3_3:84200157-84200176 | Msa0479270:intron | 40.0% | |
| TACCTGGTTTCAGTATGGTT+TGG | - | chr3_3:84200162-84200181 | Msa0479270:intron | 40.0% | |
| TTCCAAACCATACTGAAACC+AGG | + | chr3_3:84200167-84200186 | None:intergenic | 40.0% | |
| ! | AGAACTTCGGGTTTAGAAGA+TGG | - | chr3_3:84198818-84198837 | Msa0479270:three_prime_UTR | 40.0% |
| CATTGAACAACTCATGCATC+TGG | - | chr3_3:84198937-84198956 | Msa0479270:CDS | 40.0% | |
| TAACAGTGACCAAAACGTGT+TGG | - | chr3_3:84199027-84199046 | Msa0479270:intron | 40.0% | |
| AACAGTGACCAAAACGTGTT+GGG | - | chr3_3:84199028-84199047 | Msa0479270:intron | 40.0% | |
| ! | CCTTAAATCCCAACACGTTT+TGG | + | chr3_3:84199039-84199058 | None:intergenic | 40.0% |
| CCAAAACGTGTTGGGATTTA+AGG | - | chr3_3:84199036-84199055 | Msa0479270:intron | 40.0% | |
| ! | AACAACAACCAAGCCTTATG+GGG | + | chr3_3:84199255-84199274 | None:intergenic | 40.0% |
| ! | TAGTTGATTTCACCGCTTCT+TGG | - | chr3_3:84199717-84199736 | Msa0479270:intron | 40.0% |
| CCAAAATTGGGGCAATGAAA+CGG | + | chr3_3:84199754-84199773 | None:intergenic | 40.0% | |
| AGCAATCTCTGCCAAAATTG+GGG | + | chr3_3:84199765-84199784 | None:intergenic | 40.0% | |
| ATCAACATCAACCTTGAGGA+AGG | + | chr3_3:84199807-84199826 | None:intergenic | 40.0% | |
| AGAAGGAAAACTTGTGGACA+AGG | - | chr3_3:84200010-84200029 | Msa0479270:intron | 40.0% | |
| AAACTTGTGGACAAGGTTGT+TGG | - | chr3_3:84200017-84200036 | Msa0479270:intron | 40.0% | |
| ATGCAACTACTGATGCTTGA+AGG | - | chr3_3:84200078-84200097 | Msa0479270:intron | 40.0% | |
| TGCAACTACTGATGCTTGAA+GGG | - | chr3_3:84200079-84200098 | Msa0479270:intron | 40.0% | |
| CAGTTTACCTGGTTTCAGTA+TGG | - | chr3_3:84200157-84200176 | Msa0479270:intron | 40.0% | |
| TACCTGGTTTCAGTATGGTT+TGG | - | chr3_3:84200162-84200181 | Msa0479270:intron | 40.0% | |
| TTCCAAACCATACTGAAACC+AGG | + | chr3_3:84200167-84200186 | None:intergenic | 40.0% | |
| AGAAAAATGGCCGCAGAAGA+GGG | - | chr3_3:84198478-84198497 | Msa0479270:three_prime_UTR | 45.0% | |
| GGGAAATGGATCCAAGAAAC+TGG | - | chr3_3:84198552-84198571 | Msa0479270:three_prime_UTR | 45.0% | |
| GGAAATGGAAAACCCTAGTG+CGG | + | chr3_3:84198628-84198647 | None:intergenic | 45.0% | |
| GGGTTTAGAAGATGGAGAGA+GGG | - | chr3_3:84198826-84198845 | Msa0479270:three_prime_UTR | 45.0% | |
| ! | CCGTTTCATTGCCCCAATTT+TGG | - | chr3_3:84199751-84199770 | Msa0479270:intron | 45.0% |
| ACCTTGAGGAAGGTGACATT+GGG | + | chr3_3:84199797-84199816 | None:intergenic | 45.0% | |
| AACCTTGAGGAAGGTGACAT+TGG | + | chr3_3:84199798-84199817 | None:intergenic | 45.0% | |
| ATCTCTTCAGACTGTTGCTG+AGG | - | chr3_3:84199947-84199966 | Msa0479270:intron | 45.0% | |
| GCTATTCGAGTCAGTTTACC+TGG | - | chr3_3:84200146-84200165 | Msa0479270:intron | 45.0% | |
| ATCTAAAGAGGGTCCATGGA+TGG | + | chr3_3:84200378-84200397 | None:intergenic | 45.0% | |
| TCCATGGACCCTCTTTAGAT+TGG | - | chr3_3:84200378-84200397 | Msa0479270:CDS | 45.0% | |
| CCATGGACCCTCTTTAGATT+GGG | - | chr3_3:84200379-84200398 | Msa0479270:CDS | 45.0% | |
| AGAAAAATGGCCGCAGAAGA+GGG | - | chr3_3:84198478-84198497 | Msa0479270:three_prime_UTR | 45.0% | |
| GGGAAATGGATCCAAGAAAC+TGG | - | chr3_3:84198552-84198571 | Msa0479270:three_prime_UTR | 45.0% | |
| GGAAATGGAAAACCCTAGTG+CGG | + | chr3_3:84198628-84198647 | None:intergenic | 45.0% | |
| GGGTTTAGAAGATGGAGAGA+GGG | - | chr3_3:84198826-84198845 | Msa0479270:three_prime_UTR | 45.0% | |
| ! | CCGTTTCATTGCCCCAATTT+TGG | - | chr3_3:84199751-84199770 | Msa0479270:intron | 45.0% |
| ACCTTGAGGAAGGTGACATT+GGG | + | chr3_3:84199797-84199816 | None:intergenic | 45.0% | |
| AACCTTGAGGAAGGTGACAT+TGG | + | chr3_3:84199798-84199817 | None:intergenic | 45.0% | |
| ATCTCTTCAGACTGTTGCTG+AGG | - | chr3_3:84199947-84199966 | Msa0479270:intron | 45.0% | |
| GCTATTCGAGTCAGTTTACC+TGG | - | chr3_3:84200146-84200165 | Msa0479270:intron | 45.0% | |
| ATCTAAAGAGGGTCCATGGA+TGG | + | chr3_3:84200378-84200397 | None:intergenic | 45.0% | |
| TCCATGGACCCTCTTTAGAT+TGG | - | chr3_3:84200378-84200397 | Msa0479270:CDS | 45.0% | |
| CCATGGACCCTCTTTAGATT+GGG | - | chr3_3:84200379-84200398 | Msa0479270:CDS | 45.0% | |
| GAGAAAAATGGCCGCAGAAG+AGG | - | chr3_3:84198477-84198496 | Msa0479270:three_prime_UTR | 50.0% | |
| GATCACTTGTCCCTCTTCTG+CGG | + | chr3_3:84198491-84198510 | None:intergenic | 50.0% | |
| GCAGAAGAGGGACAAGTGAT+CGG | - | chr3_3:84198490-84198509 | Msa0479270:three_prime_UTR | 50.0% | |
| AGTGATCGGAGTTCACACTG+TGG | - | chr3_3:84198504-84198523 | Msa0479270:three_prime_UTR | 50.0% | |
| TTGGAAGGAACACCTCGAGA+AGG | - | chr3_3:84198531-84198550 | Msa0479270:three_prime_UTR | 50.0% | |
| TGGAAGGAACACCTCGAGAA+GGG | - | chr3_3:84198532-84198551 | Msa0479270:three_prime_UTR | 50.0% | |
| GAACACCTCGAGAAGGGAAA+TGG | - | chr3_3:84198538-84198557 | Msa0479270:three_prime_UTR | 50.0% | |
| TGGATCCATTTCCCTTCTCG+AGG | + | chr3_3:84198546-84198565 | None:intergenic | 50.0% | |
| CGGGTTTAGAAGATGGAGAG+AGG | - | chr3_3:84198825-84198844 | Msa0479270:three_prime_UTR | 50.0% | |
| GTTCTTAGCCCCATAAGGCT+TGG | - | chr3_3:84199244-84199263 | Msa0479270:intron | 50.0% | |
| GATTTCACCGCTTCTTGGTG+TGG | - | chr3_3:84199722-84199741 | Msa0479270:intron | 50.0% | |
| ATTGGGGCAATGAAACGGCA+CGG | + | chr3_3:84199749-84199768 | None:intergenic | 50.0% | |
| TTCAGACTGTTGCTGAGGAG+TGG | - | chr3_3:84199952-84199971 | Msa0479270:intron | 50.0% | |
| TCAGACTGTTGCTGAGGAGT+GGG | - | chr3_3:84199953-84199972 | Msa0479270:intron | 50.0% | |
| ! | CAAGGTTGTTGGTGCTCAGA+AGG | - | chr3_3:84200028-84200047 | Msa0479270:intron | 50.0% |
| CCCAATCTAAAGAGGGTCCA+TGG | + | chr3_3:84200382-84200401 | None:intergenic | 50.0% | |
| TGGACCCTCTTTAGATTGGG+TGG | - | chr3_3:84200382-84200401 | Msa0479270:CDS | 50.0% | |
| TGGGCCACCCAATCTAAAGA+GGG | + | chr3_3:84200389-84200408 | None:intergenic | 50.0% | |
| TTGGGCCACCCAATCTAAAG+AGG | + | chr3_3:84200390-84200409 | None:intergenic | 50.0% | |
| GAGAAAAATGGCCGCAGAAG+AGG | - | chr3_3:84198477-84198496 | Msa0479270:three_prime_UTR | 50.0% | |
| GATCACTTGTCCCTCTTCTG+CGG | + | chr3_3:84198491-84198510 | None:intergenic | 50.0% | |
| GCAGAAGAGGGACAAGTGAT+CGG | - | chr3_3:84198490-84198509 | Msa0479270:three_prime_UTR | 50.0% | |
| AGTGATCGGAGTTCACACTG+TGG | - | chr3_3:84198504-84198523 | Msa0479270:three_prime_UTR | 50.0% | |
| TTGGAAGGAACACCTCGAGA+AGG | - | chr3_3:84198531-84198550 | Msa0479270:three_prime_UTR | 50.0% | |
| TGGAAGGAACACCTCGAGAA+GGG | - | chr3_3:84198532-84198551 | Msa0479270:three_prime_UTR | 50.0% | |
| GAACACCTCGAGAAGGGAAA+TGG | - | chr3_3:84198538-84198557 | Msa0479270:three_prime_UTR | 50.0% | |
| TGGATCCATTTCCCTTCTCG+AGG | + | chr3_3:84198546-84198565 | None:intergenic | 50.0% | |
| CGGGTTTAGAAGATGGAGAG+AGG | - | chr3_3:84198825-84198844 | Msa0479270:three_prime_UTR | 50.0% | |
| GTTCTTAGCCCCATAAGGCT+TGG | - | chr3_3:84199244-84199263 | Msa0479270:intron | 50.0% | |
| GATTTCACCGCTTCTTGGTG+TGG | - | chr3_3:84199722-84199741 | Msa0479270:intron | 50.0% | |
| ATTGGGGCAATGAAACGGCA+CGG | + | chr3_3:84199749-84199768 | None:intergenic | 50.0% | |
| TTCAGACTGTTGCTGAGGAG+TGG | - | chr3_3:84199952-84199971 | Msa0479270:intron | 50.0% | |
| TCAGACTGTTGCTGAGGAGT+GGG | - | chr3_3:84199953-84199972 | Msa0479270:intron | 50.0% | |
| ! | CAAGGTTGTTGGTGCTCAGA+AGG | - | chr3_3:84200028-84200047 | Msa0479270:intron | 50.0% |
| CCCAATCTAAAGAGGGTCCA+TGG | + | chr3_3:84200382-84200401 | None:intergenic | 50.0% | |
| TGGACCCTCTTTAGATTGGG+TGG | - | chr3_3:84200382-84200401 | Msa0479270:CDS | 50.0% | |
| TGGGCCACCCAATCTAAAGA+GGG | + | chr3_3:84200389-84200408 | None:intergenic | 50.0% | |
| TTGGGCCACCCAATCTAAAG+AGG | + | chr3_3:84200390-84200409 | None:intergenic | 50.0% | |
| GATCGGAGTTCACACTGTGG+AGG | - | chr3_3:84198507-84198526 | Msa0479270:three_prime_UTR | 55.0% | |
| GAGTTCACACTGTGGAGGCT+TGG | - | chr3_3:84198512-84198531 | Msa0479270:three_prime_UTR | 55.0% | |
| TCACACTGTGGAGGCTTGGA+AGG | - | chr3_3:84198516-84198535 | Msa0479270:three_prime_UTR | 55.0% | |
| TTGGGGCAATGAAACGGCAC+GGG | + | chr3_3:84199748-84199767 | None:intergenic | 55.0% | |
| GCCCAATGTCACCTTCCTCA+AGG | - | chr3_3:84199793-84199812 | Msa0479270:intron | 55.0% | |
| GATCGGAGTTCACACTGTGG+AGG | - | chr3_3:84198507-84198526 | Msa0479270:three_prime_UTR | 55.0% | |
| GAGTTCACACTGTGGAGGCT+TGG | - | chr3_3:84198512-84198531 | Msa0479270:three_prime_UTR | 55.0% | |
| TCACACTGTGGAGGCTTGGA+AGG | - | chr3_3:84198516-84198535 | Msa0479270:three_prime_UTR | 55.0% | |
| TTGGGGCAATGAAACGGCAC+GGG | + | chr3_3:84199748-84199767 | None:intergenic | 55.0% | |
| GCCCAATGTCACCTTCCTCA+AGG | - | chr3_3:84199793-84199812 | Msa0479270:intron | 55.0% | |
| GCACGGGCCACACCAAGAAG+CGG | + | chr3_3:84199732-84199751 | None:intergenic | 65.0% | |
| GCACGGGCCACACCAAGAAG+CGG | + | chr3_3:84199732-84199751 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 84198437 | 84200509 | 84198437 | ID=Msa0479270;Name=Msa0479270 |
| chr3_3 | mRNA | 84198437 | 84200509 | 84198437 | ID=Msa0479270-mRNA-1;Parent=Msa0479270;Name=Msa0479270-mRNA-1;_AED=0.21;_eAED=0.21;_QI=47|1|1|1|1|1|3|412|117 |
| chr3_3 | exon | 84198437 | 84198989 | 84198437 | ID=Msa0479270-mRNA-1:exon:23896;Parent=Msa0479270-mRNA-1 |
| chr3_3 | exon | 84199111 | 84199233 | 84199111 | ID=Msa0479270-mRNA-1:exon:23895;Parent=Msa0479270-mRNA-1 |
| chr3_3 | exon | 84200373 | 84200509 | 84200373 | ID=Msa0479270-mRNA-1:exon:23894;Parent=Msa0479270-mRNA-1 |
| chr3_3 | five_prime_UTR | 84200463 | 84200509 | 84200463 | ID=Msa0479270-mRNA-1:five_prime_utr;Parent=Msa0479270-mRNA-1 |
| chr3_3 | CDS | 84200373 | 84200462 | 84200373 | ID=Msa0479270-mRNA-1:cds;Parent=Msa0479270-mRNA-1 |
| chr3_3 | CDS | 84199111 | 84199233 | 84199111 | ID=Msa0479270-mRNA-1:cds;Parent=Msa0479270-mRNA-1 |
| chr3_3 | CDS | 84198849 | 84198989 | 84198849 | ID=Msa0479270-mRNA-1:cds;Parent=Msa0479270-mRNA-1 |
| chr3_3 | three_prime_UTR | 84198437 | 84198848 | 84198437 | ID=Msa0479270-mRNA-1:three_prime_utr;Parent=Msa0479270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
