AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0303460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0303460 MtrunA17_Chr2g0330411 99.647 283 1 0 1 283 1 283 0.0 575
Msa0303460 MtrunA17_Chr2g0308551 36.842 285 138 5 13 255 1 285 7.76e-49 164
Msa0303460 MtrunA17_Chr7g0221311 36.859 312 162 9 1 281 1 308 4.14e-47 162
Msa0303460 MtrunA17_Chr4g0073281 35.065 231 149 1 32 262 1 230 1.15e-40 142
Msa0303460 MtrunA17_Chr5g0431341 31.224 237 152 5 44 270 37 272 1.97e-35 128
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0303460 AT1G55170.1 51.049 286 132 4 1 282 1 282 1.77e-86 260
Msa0303460 AT3G14750.1 38.696 230 131 3 37 257 63 291 1.73e-46 159
Msa0303460 AT1G67170.2 38.647 207 127 0 33 239 47 253 5.67e-42 148
Msa0303460 AT1G67170.1 38.647 207 127 0 33 239 47 253 5.67e-42 148
Msa0303460 AT2G30120.5 26.957 230 154 1 42 257 37 266 2.59e-21 91.7
Msa0303460 AT2G30120.4 26.754 228 153 1 42 255 37 264 6.04e-21 90.1
Msa0303460 AT2G30120.2 26.638 229 154 1 41 255 36 264 6.70e-21 90.5
Msa0303460 AT5G61920.3 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0303460 AT5G61920.5 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0303460 AT5G61920.2 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0303460 AT5G61920.6 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0303460 AT5G61920.1 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0303460 AT5G61920.4 28.902 173 123 0 49 221 17 189 1.55e-16 76.6
Msa0303460 AT2G30120.3 27.972 143 103 0 39 181 34 176 1.13e-11 62.8
Msa0303460 AT2G30120.1 27.972 143 103 0 39 181 34 176 1.64e-11 62.0
Msa0303460 AT2G30120.6 27.972 143 103 0 39 181 34 176 1.64e-11 62.0

Find 162 sgRNAs with CRISPR-Local

Find 517 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCTTCAATTTCTAATT+AGG 0.149861 2_3:+60659407 Msa0303460:five_prime_UTR
CTACACTTTGTAATAAATTA+TGG 0.161788 2_3:-60665808 None:intergenic
GCAGAGAAAGGTCCTCTTTA+TGG 0.176094 2_3:+60661526 Msa0303460:CDS
TTGCCTTATGGAACAAATTT+TGG 0.192469 2_3:+60661357 Msa0303460:CDS
CGAAATGTTTCAACGTGTTT+TGG 0.209278 2_3:+60665676 Msa0303460:three_prime_UTR
CGCAAAATCTCGCAGCATTA+TGG 0.232507 2_3:-60665072 None:intergenic
ATTCATGCAGGTTTGCCTTA+TGG 0.235597 2_3:+60661345 Msa0303460:intron
AAACTATATGCATGATTAAA+TGG 0.243539 2_3:-60665887 None:intergenic
ATGGGGTGGGTACTGCTTCT+AGG 0.246552 2_3:+60661545 Msa0303460:CDS
CACTTACGAAAGATGTTTCT+AGG 0.253529 2_3:+60660283 Msa0303460:CDS
AGTATCAAACAAGAACTTTC+TGG 0.261139 2_3:+60660249 Msa0303460:CDS
AAAATTAAGCCACTAGGATT+TGG 0.264537 2_3:+60665962 Msa0303460:three_prime_UTR
AGTTTCTTGCACGCTCTATT+TGG 0.269956 2_3:+60665642 Msa0303460:three_prime_UTR
CAAAACACGTTGAAACATTT+CGG 0.287707 2_3:-60665675 None:intergenic
CTCTATGAAGTTCGGATTAT+AGG 0.291892 2_3:-60665731 None:intergenic
TAAAAGCTCTTTGAGTTATA+CGG 0.292488 2_3:-60659286 None:intergenic
TTGAGTTATACGGCGTCGTT+TGG 0.293424 2_3:-60659276 None:intergenic
TTGGAAATGAAAGCTTTAAA+AGG 0.310780 2_3:+60665254 Msa0303460:three_prime_UTR
TACACTTTGTAATAAATTAT+GGG 0.316188 2_3:-60665807 None:intergenic
CACGAAGTTTCTCAACTTCT+CGG 0.317894 2_3:-60660580 None:intergenic
AAAACGGGTGAAGAGTATTA+TGG 0.320282 2_3:+60665129 Msa0303460:three_prime_UTR
GAGATAAAAGACCATTAAAA+TGG 0.326020 2_3:-60661693 None:intergenic
ACCTAGCACGCATCAGTTCT+TGG 0.336174 2_3:-60660362 None:intergenic
ACCTCATCCAGCATTGTTAG+AGG 0.338446 2_3:+60659954 Msa0303460:CDS
CCTCCATATGCAGATGGATA+TGG 0.340583 2_3:+60661402 Msa0303460:CDS
TCTTCCTACTCGCGTCTAAA+TGG 0.346507 2_3:-60665853 None:intergenic
CAGAGAAAGGTCCTCTTTAT+GGG 0.349670 2_3:+60661527 Msa0303460:CDS
TCAATGAGATCTGAGATTGA+TGG 0.370744 2_3:+60660333 Msa0303460:CDS
CAATCTAAAATTTGGAAATC+AGG 0.374042 2_3:-60665529 None:intergenic
GGAGGCTGGTGGCGGATAAC+AGG 0.382841 2_3:+60660007 Msa0303460:CDS
GCATTTGACATTTGAGTAGA+TGG 0.387169 2_3:+60665598 Msa0303460:three_prime_UTR
CTTCCGATGGATACCCTCTT+CGG 0.387777 2_3:-60659885 None:intergenic
CCCGCACGCTCTATGAAGTT+CGG 0.395759 2_3:-60665739 None:intergenic
GAAGGCAAACATGGAGTTCA+TGG 0.395776 2_3:+60660517 Msa0303460:CDS
AGAGCGTGCAAGAAACTCAT+AGG 0.399746 2_3:-60665636 None:intergenic
TTCAATTGGGTTGTCCTCCT+TGG 0.404053 2_3:+60665404 Msa0303460:three_prime_UTR
ACACTACAAAACTAATTGTA+TGG 0.405882 2_3:+60666029 Msa0303460:three_prime_UTR
TGAGTTATACGGCGTCGTTT+GGG 0.409841 2_3:-60659275 None:intergenic
CTACCAAAATTTGTTCCATA+AGG 0.410355 2_3:-60661360 None:intergenic
ATTAGTTGAAAATGCAAAAC+GGG 0.412342 2_3:+60665114 Msa0303460:three_prime_UTR
TGAAGTTGGAGTCTGATCTT+AGG 0.426762 2_3:+60660166 Msa0303460:CDS
GGTGGTGGCCCGCGAGCATA+AGG 0.435456 2_3:-60659910 None:intergenic
TAGCATGGATGGAAGACATT+GGG 0.438242 2_3:+60660613 Msa0303460:CDS
TTTCTCAACTTCTCGGGCCA+TGG 0.443621 2_3:-60660573 None:intergenic
TTCCGATGGATACCCTCTTC+GGG 0.447941 2_3:-60659884 None:intergenic
AAACATCTTTCGTAAGTGTC+TGG 0.450505 2_3:-60660278 None:intergenic
CCGATGGTTTAATTGTGCTT+TGG 0.457270 2_3:+60665496 Msa0303460:three_prime_UTR
GTTTAGGCTGCTGCAGAGAA+AGG 0.464656 2_3:+60661514 Msa0303460:intron
GATGGAAGACATTGGGGAGC+TGG 0.465511 2_3:+60660620 Msa0303460:CDS
AAACGGGTGAAGAGTATTAT+GGG 0.466446 2_3:+60665130 Msa0303460:three_prime_UTR
GTATCAAACAAGAACTTTCT+GGG 0.473347 2_3:+60660250 Msa0303460:CDS
TCAATCTCAGATCTCATTGA+AGG 0.475047 2_3:-60660330 None:intergenic
CTTACTATATGCTTTCAGCT+TGG 0.475286 2_3:+60665430 Msa0303460:three_prime_UTR
AGAGCGTGCGGGAAACTCAT+AGG 0.475766 2_3:+60665750 Msa0303460:three_prime_UTR
AATGAAAGCTTTAAAAGGTA+TGG 0.476327 2_3:+60665259 Msa0303460:three_prime_UTR
GCTGAGGGCAAGTAGGGCAC+AGG 0.477124 2_3:+60665152 Msa0303460:three_prime_UTR
GATAGTATGCATGAGGTCCT+AGG 0.482561 2_3:+60665984 Msa0303460:three_prime_UTR
ACGAAGTTTCTCAACTTCTC+GGG 0.483936 2_3:-60660579 None:intergenic
TACTTCGCTAACACAGCTAA+AGG 0.487483 2_3:-60661646 None:intergenic
AGCTCTTCCTCTAACAATGC+TGG 0.487736 2_3:-60659961 None:intergenic
TATTAGTTGAAAATGCAAAA+CGG 0.491707 2_3:+60665113 Msa0303460:three_prime_UTR
AATGCACAAGCCCAACTAAA+GGG 0.494054 2_3:-60665580 None:intergenic
ACACCATATCCATCTGCATA+TGG 0.495250 2_3:-60661405 None:intergenic
AGCTTTCATTTCCAATCTCA+CGG 0.498392 2_3:-60665246 None:intergenic
AAATGCACAAGCCCAACTAA+AGG 0.500360 2_3:-60665581 None:intergenic
GCGAGACCTTGCAGCTGCGA+AGG 0.508426 2_3:+60660059 Msa0303460:CDS
TATGGTGGATTATGAAAAGA+AGG 0.509898 2_3:+60660499 Msa0303460:CDS
TACCCTCTTCGGGAACTCAT+TGG 0.513298 2_3:-60659874 None:intergenic
AAGAAGAGGGTCGCGTACGA+TGG 0.513958 2_3:-60659349 None:intergenic
ACTTCGCTAACACAGCTAAA+GGG 0.514081 2_3:-60661645 None:intergenic
TCCTCTAACAATGCTGGATG+AGG 0.514770 2_3:-60659955 None:intergenic
TATAGGGTATGTATGCCGTT+CGG 0.515712 2_3:+60665706 Msa0303460:three_prime_UTR
CTCGCAGCATTATGGTGTGT+GGG 0.516947 2_3:-60665064 None:intergenic
TGCTGTCGTGGCATTGGTGG+TGG 0.516987 2_3:-60659925 None:intergenic
TATCCATCTGCATATGGAGG+TGG 0.517988 2_3:-60661399 None:intergenic
CAAGCTGAAAGCATATAGTA+AGG 0.520368 2_3:-60665429 None:intergenic
GCTGAGCTTGCTAGCATGGA+TGG 0.521001 2_3:+60660602 Msa0303460:CDS
TCGTGCTGAGCTTGCTAGCA+TGG 0.521988 2_3:+60660598 Msa0303460:CDS
CTGAACATGAGATGCATTCG+AGG 0.524074 2_3:+60660124 Msa0303460:CDS
CATCGTATGAATTTAGCGAT+TGG 0.524610 2_3:+60660090 Msa0303460:CDS
GTGTTATCTTGATCCATCAC+AGG 0.526559 2_3:-60665187 None:intergenic
GTGAAGAGTATTATGGGCTG+AGG 0.527834 2_3:+60665136 Msa0303460:three_prime_UTR
GCAGTACCCACCCCATAAAG+AGG 0.528840 2_3:-60661538 None:intergenic
AGACCTTGCAGCTGCGAAGG+AGG 0.529458 2_3:+60660062 Msa0303460:CDS
CATGGAACAGAGGCAGTCAA+TGG 0.533149 2_3:+60660535 Msa0303460:CDS
GAAAGCTTTAAAAGGTATGG+TGG 0.533811 2_3:+60665262 Msa0303460:three_prime_UTR
TATGGTTGCAGATGGAGAGC+TGG 0.534739 2_3:+60665006 Msa0303460:intron
TGTATAACTTCATTCTTCAA+CGG 0.535567 2_3:-60660198 None:intergenic
TCAACTAATAATGAACATCT+CGG 0.535736 2_3:-60665100 None:intergenic
CGTGCGGGAAACTCATAGGT+TGG 0.548592 2_3:+60665754 Msa0303460:three_prime_UTR
GGAATATGCTGTCGTGGCAT+TGG 0.548596 2_3:-60659931 None:intergenic
TCTAACAATGCTGGATGAGG+TGG 0.550555 2_3:-60659952 None:intergenic
CCTCTTCGGGAACTCATTGG+TGG 0.551456 2_3:-60659871 None:intergenic
TGATGAAAGAGTTTATCAGC+AGG 0.553082 2_3:+60665454 Msa0303460:three_prime_UTR
TAGGAAATGTACCTACTGAT+GGG 0.553548 2_3:+60665828 Msa0303460:three_prime_UTR
TTATGGGCTGAGGGCAAGTA+GGG 0.554039 2_3:+60665146 Msa0303460:three_prime_UTR
AACACAGCTAAAGGGATGGC+AGG 0.555700 2_3:-60661637 None:intergenic
TATCAAAACACAACAAAGGC+AGG 0.556096 2_3:-60665217 None:intergenic
CTAGCATGGATGGAAGACAT+TGG 0.560779 2_3:+60660612 Msa0303460:CDS
TCGGAAGGTCCTTATGCTCG+CGG 0.566608 2_3:+60659901 Msa0303460:CDS
ACCAAGAACTGATGCGTGCT+AGG 0.567292 2_3:+60660361 Msa0303460:CDS
CTGAGGGCAAGTAGGGCACA+GGG 0.571813 2_3:+60665153 Msa0303460:three_prime_UTR
GGAGGTAACGACTTCAACCT+AGG 0.571856 2_3:-60666001 None:intergenic
ATTATGGGCTGAGGGCAAGT+AGG 0.572951 2_3:+60665145 Msa0303460:three_prime_UTR
TTATGAAAAGAAGGCAAACA+TGG 0.573229 2_3:+60660508 Msa0303460:CDS
GCTCCTCCTTCGCAGCTGCA+AGG 0.574836 2_3:-60660065 None:intergenic
GTAGGAAATGTACCTACTGA+TGG 0.577220 2_3:+60665827 Msa0303460:three_prime_UTR
ATTCAACGACGGTTTGAGCG+AGG 0.579107 2_3:-60661583 None:intergenic
AAAGGTCCTCTTTATGGGGT+GGG 0.581180 2_3:+60661532 Msa0303460:CDS
TGAATCTAAGTGATTGATGT+TGG 0.581375 2_3:+60661601 Msa0303460:exon
TCTCGCAGCATTATGGTGTG+TGG 0.585323 2_3:-60665065 None:intergenic
CGCTAACACAGCTAAAGGGA+TGG 0.585429 2_3:-60661641 None:intergenic
GAAAGGTCCTCTTTATGGGG+TGG 0.586390 2_3:+60661531 Msa0303460:CDS
ATATGCTGTCGTGGCATTGG+TGG 0.591214 2_3:-60659928 None:intergenic
ACAGGAGGTTGATTGATGAT+CGG 0.594043 2_3:+60660025 Msa0303460:CDS
TTCCCACCTCCATATGCAGA+TGG 0.594536 2_3:+60661396 Msa0303460:CDS
ATCCATCTGCATATGGAGGT+GGG 0.596363 2_3:-60661398 None:intergenic
CGGAAGGTCCTTATGCTCGC+GGG 0.597736 2_3:+60659902 Msa0303460:CDS
TCCGAACTTCATAGAGCGTG+CGG 0.599188 2_3:+60665738 Msa0303460:three_prime_UTR
CAAACAAGAACTTTCTGGGA+AGG 0.599275 2_3:+60660254 Msa0303460:CDS
TAGCTGTGTTAGCGAAGTAG+CGG 0.599283 2_3:+60661650 Msa0303460:three_prime_UTR
TTGATGTTGGTGATGAAGAA+AGG 0.600863 2_3:+60661614 Msa0303460:three_prime_UTR
TGAAATGAGGAGGCTGGTGG+CGG 0.604523 2_3:+60659999 Msa0303460:CDS
GCATGCTGAAATGAGGAGGC+TGG 0.605896 2_3:+60659993 Msa0303460:CDS
GGCTGGTGGCGGATAACAGG+AGG 0.608308 2_3:+60660010 Msa0303460:CDS
GAGCGTGCAAGAAACTCATA+GGG 0.610837 2_3:-60665635 None:intergenic
CCAAAGCACAATTAAACCAT+CGG 0.612942 2_3:-60665496 None:intergenic
CATAATTTATTACAAAGTGT+AGG 0.614382 2_3:+60665809 Msa0303460:three_prime_UTR
CACCAATGAGTTCCCGAAGA+GGG 0.614590 2_3:+60659872 Msa0303460:CDS
CGTGCAAGAAACTCATAGGG+TGG 0.615760 2_3:-60665632 None:intergenic
CGAGCATAAGGACCTTCCGA+TGG 0.617038 2_3:-60659898 None:intergenic
GGGGCCATTTAGACGCGAGT+AGG 0.619983 2_3:+60665849 Msa0303460:three_prime_UTR
CGAAGAGGGTATCCATCGGA+AGG 0.623087 2_3:+60659886 Msa0303460:CDS
CCGAACTTCATAGAGCGTGC+GGG 0.626111 2_3:+60665739 Msa0303460:three_prime_UTR
AAGTGCAGCATGCTGAAATG+AGG 0.630681 2_3:+60659986 Msa0303460:CDS
GTGCAAGAAACTCATAGGGT+GGG 0.634316 2_3:-60665631 None:intergenic
AGGAAATGTACCTACTGATG+GGG 0.638320 2_3:+60665829 Msa0303460:three_prime_UTR
TTCCCGAAGAGGGTATCCAT+CGG 0.640372 2_3:+60659882 Msa0303460:CDS
AAAATATCAAAACACAACAA+AGG 0.643607 2_3:-60665221 None:intergenic
TGTTATCTTGATCCATCACA+GGG 0.644177 2_3:-60665186 None:intergenic
TGAAGAGTATTATGGGCTGA+GGG 0.644753 2_3:+60665137 Msa0303460:three_prime_UTR
TCGCAGCATTATGGTGTGTG+GGG 0.649104 2_3:-60665063 None:intergenic
GGATTTGGATAGTATGCATG+AGG 0.650640 2_3:+60665977 Msa0303460:three_prime_UTR
AGCATGGATGGAAGACATTG+GGG 0.653311 2_3:+60660614 Msa0303460:CDS
TGAGGTGGAATATGCTGTCG+TGG 0.657020 2_3:-60659937 None:intergenic
CCATATCCATCTGCATATGG+AGG 0.657742 2_3:-60661402 None:intergenic
GGAAATGTACCTACTGATGG+GGG 0.669640 2_3:+60665830 Msa0303460:three_prime_UTR
GATGAAAGAGTTTATCAGCA+GGG 0.669777 2_3:+60665455 Msa0303460:three_prime_UTR
GCATACTATCCAAATCCTAG+TGG 0.669807 2_3:-60665971 None:intergenic
TGCTGAAATGAGGAGGCTGG+TGG 0.673111 2_3:+60659996 Msa0303460:CDS
TGAACATGAGATGCATTCGA+GGG 0.676175 2_3:+60660125 Msa0303460:CDS
AGAGAAAGGTCCTCTTTATG+GGG 0.677550 2_3:+60661528 Msa0303460:CDS
TGCAGCATGCTGAAATGAGG+AGG 0.680683 2_3:+60659989 Msa0303460:CDS
CAATCACTTAGATTCAACGA+CGG 0.682596 2_3:-60661594 None:intergenic
TTGGTGGCTCTCTATGAACA+CGG 0.684269 2_3:-60659855 None:intergenic
ACATGGAGTTCATGGAACAG+AGG 0.685058 2_3:+60660525 Msa0303460:CDS
CCACCAATGAGTTCCCGAAG+AGG 0.693852 2_3:+60659871 Msa0303460:CDS
AGATGGATATGGTGTTCACA+TGG 0.705947 2_3:+60661413 Msa0303460:CDS
TTCGGATTATAGGATCCGAA+CGG 0.708886 2_3:-60665721 None:intergenic
AAGCATATAGTAAGGCACCA+AGG 0.723002 2_3:-60665421 None:intergenic
GAAAGAGTTTATCAGCAGGG+CGG 0.743630 2_3:+60665458 Msa0303460:three_prime_UTR
CATATAGTAAGGCACCAAGG+AGG 0.769093 2_3:-60665418 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATACTGTTAATTTTAAAT+TGG + chr2_3:60661732-60661751 Msa0303460:intron 10.0%
!! ATTAAAAGCTTAAAAAAATT+TGG + chr2_3:60662991-60663010 Msa0303460:intron 10.0%
!!! ATTTTTGTTTTATAGAACTA+TGG + chr2_3:60660481-60660500 Msa0303460:intron 15.0%
!! TTAATAAAAGACATGAAAAA+CGG + chr2_3:60660798-60660817 Msa0303460:intron 15.0%
!! AAAACAAGAAATATTATCAA+TGG - chr2_3:60661867-60661886 None:intergenic 15.0%
!!! TGTTTAGTTATTATTTGTTT+TGG + chr2_3:60661908-60661927 Msa0303460:intron 15.0%
!!! GTTTAGTTATTATTTGTTTT+GGG + chr2_3:60661909-60661928 Msa0303460:intron 15.0%
!!! TTTAGTTATTATTTGTTTTG+GGG + chr2_3:60661910-60661929 Msa0303460:intron 15.0%
!!! AAACTTTAAAGCTTAATTTA+TGG + chr2_3:60662238-60662257 Msa0303460:intron 15.0%
!! ATTAAAAGCTTAAAATTGTT+TGG + chr2_3:60662936-60662955 Msa0303460:intron 15.0%
!! TGTATAACAATAGTATTTAA+GGG + chr2_3:60663174-60663193 Msa0303460:intron 15.0%
!! ATAAAAAATGAGAAACTTTA+TGG - chr2_3:60663303-60663322 None:intergenic 15.0%
!! AATCTATTATATTTATGGAT+GGG + chr2_3:60663552-60663571 Msa0303460:intron 15.0%
!!! AATTAGTTTCGTATTAATAT+GGG - chr2_3:60663838-60663857 None:intergenic 15.0%
!!! TAATTAGTTTCGTATTAATA+TGG - chr2_3:60663839-60663858 None:intergenic 15.0%
!! TATAATAATAACAACAGATA+TGG - chr2_3:60664165-60664184 None:intergenic 15.0%
!!! ATATCTGTTGTTATTATTAT+AGG + chr2_3:60664164-60664183 Msa0303460:intron 15.0%
!! ATAATAATAGATACAAAGTT+AGG - chr2_3:60664989-60665008 None:intergenic 15.0%
!! TAACTTTGTATCTATTATTA+TGG + chr2_3:60664988-60665007 Msa0303460:intron 15.0%
!! AAAAGAAAAAAAAAAAAGGA+GGG - chr2_3:60665560-60665579 None:intergenic 15.0%
!! TACACTTTGTAATAAATTAT+GGG - chr2_3:60665810-60665829 None:intergenic 15.0%
!! ATTCTCTTCAATTTCTAATT+AGG + chr2_3:60659407-60659426 Msa0303460:five_prime_UTR 20.0%
!!! TTTCACGTGTTTATATTTTT+TGG + chr2_3:60659477-60659496 Msa0303460:intron 20.0%
!!! TTCACGTGTTTATATTTTTT+GGG + chr2_3:60659478-60659497 Msa0303460:intron 20.0%
!! TTTGTACTAATGGAAATAAA+AGG - chr2_3:60659630-60659649 None:intergenic 20.0%
!!! TGTTGATAAAAATATGAAGT+TGG + chr2_3:60660152-60660171 Msa0303460:CDS 20.0%
!! AATGAAATGACATGAATAAT+AGG + chr2_3:60660767-60660786 Msa0303460:intron 20.0%
!!! TTTTGTGTATTATGTGATTA+CGG - chr2_3:60660897-60660916 None:intergenic 20.0%
!!! TTTTTAGAATTTAAGGCAAT+TGG + chr2_3:60660925-60660944 Msa0303460:intron 20.0%
!! ATCCTATTATTTGTGTTAAT+TGG + chr2_3:60661190-60661209 Msa0303460:intron 20.0%
!! ATCCAATTAACACAAATAAT+AGG - chr2_3:60661195-60661214 None:intergenic 20.0%
!! GTATATTAAGAATTGCAAAT+AGG - chr2_3:60661718-60661737 None:intergenic 20.0%
!!! AATTTTAAATTGGCATATGT+AGG + chr2_3:60661742-60661761 Msa0303460:intron 20.0%
!!! AAGTTTAAAACTTATTGTGT+TGG + chr2_3:60661819-60661838 Msa0303460:intron 20.0%
!!! TTTTAGAGTATGTTTCTTTT+AGG + chr2_3:60662276-60662295 Msa0303460:intron 20.0%
!! TTATGTTACAAATGGTTATT+TGG + chr2_3:60662464-60662483 Msa0303460:intron 20.0%
!! TATGTTACAAATGGTTATTT+GGG + chr2_3:60662465-60662484 Msa0303460:intron 20.0%
!!! TGCAAAAGATATTTAAGATT+GGG + chr2_3:60662623-60662642 Msa0303460:intron 20.0%
!! AAAAAAATTTGGTTAGACTT+CGG + chr2_3:60663002-60663021 Msa0303460:intron 20.0%
!! TGCAAACTATTTATTTGAAA+TGG + chr2_3:60663094-60663113 Msa0303460:intron 20.0%
!! TCTAATCTTATCTTTAGATT+GGG - chr2_3:60663131-60663150 None:intergenic 20.0%
!! ATCTAATCTTATCTTTAGAT+TGG - chr2_3:60663132-60663151 None:intergenic 20.0%
!! AATACTATTGTTATACAGAT+CGG - chr2_3:60663171-60663190 None:intergenic 20.0%
!! CTGTATAACAATAGTATTTA+AGG + chr2_3:60663173-60663192 Msa0303460:intron 20.0%
!! GTATAACAATAGTATTTAAG+GGG + chr2_3:60663175-60663194 Msa0303460:intron 20.0%
!! TATAACAATAGTATTTAAGG+GGG + chr2_3:60663176-60663195 Msa0303460:intron 20.0%
!!! AAGTTTCTCATTTTTTATAG+TGG + chr2_3:60663305-60663324 Msa0303460:intron 20.0%
!! ACGACAATCTATTATATTTA+TGG + chr2_3:60663547-60663566 Msa0303460:intron 20.0%
!! CAATCTATTATATTTATGGA+TGG + chr2_3:60663551-60663570 Msa0303460:intron 20.0%
!! ATCTATTATATTTATGGATG+GGG + chr2_3:60663553-60663572 Msa0303460:intron 20.0%
!! TAATTCTTGAGATTCATAAT+AGG - chr2_3:60664073-60664092 None:intergenic 20.0%
!! TATTAGTTGAAAATGCAAAA+CGG + chr2_3:60665113-60665132 Msa0303460:three_prime_UTR 20.0%
!! AAAATATCAAAACACAACAA+AGG - chr2_3:60665224-60665243 None:intergenic 20.0%
!!! ATGAACATAAAAAGCTTTTA+AGG + chr2_3:60665297-60665316 Msa0303460:three_prime_UTR 20.0%
!! AAAGAAAAAAAAAAAAGGAG+GGG - chr2_3:60665559-60665578 None:intergenic 20.0%
!! GAAAAGAAAAAAAAAAAAGG+AGG - chr2_3:60665561-60665580 None:intergenic 20.0%
!! AGGGAAAAGAAAAAAAAAAA+AGG - chr2_3:60665564-60665583 None:intergenic 20.0%
!!! TAGGTTGGAAAAAAAAAAAA+AGG + chr2_3:60665769-60665788 Msa0303460:three_prime_UTR 20.0%
!! CTACACTTTGTAATAAATTA+TGG - chr2_3:60665811-60665830 None:intergenic 20.0%
!! CATAATTTATTACAAAGTGT+AGG + chr2_3:60665809-60665828 Msa0303460:three_prime_UTR 20.0%
!! AAACTATATGCATGATTAAA+TGG - chr2_3:60665890-60665909 None:intergenic 20.0%
!! TAAAAGCTCTTTGAGTTATA+CGG - chr2_3:60659289-60659308 None:intergenic 25.0%
!! TTTTGTAAGCTAACAATACA+TGG - chr2_3:60659513-60659532 None:intergenic 25.0%
! ATCAAAAACATCAAATCCAT+GGG - chr2_3:60659537-60659556 None:intergenic 25.0%
! AATCAAAAACATCAAATCCA+TGG - chr2_3:60659538-60659557 None:intergenic 25.0%
!!! ATTAGAAGTGTTTGTACTAA+TGG - chr2_3:60659640-60659659 None:intergenic 25.0%
! ATTAGTACAAACACTTCTAA+TGG + chr2_3:60659639-60659658 Msa0303460:intron 25.0%
! CCATTTCAATTTACCTAAAA+GGG - chr2_3:60659825-60659844 None:intergenic 25.0%
!!! CCTTTTAGGTAAATTGAAAT+GGG + chr2_3:60659823-60659842 Msa0303460:intron 25.0%
! TGTATAACTTCATTCTTCAA+CGG - chr2_3:60660201-60660220 None:intergenic 25.0%
!!! TTTGTTTTATAGAACTATGG+TGG + chr2_3:60660484-60660503 Msa0303460:intron 25.0%
! ATCTTTCAGACAATTATGAA+GGG - chr2_3:60660856-60660875 None:intergenic 25.0%
! AATCACATAATACACAAAAG+TGG + chr2_3:60660898-60660917 Msa0303460:intron 25.0%
!!! TGGCAGTTTTTTAGAATTTA+AGG + chr2_3:60660918-60660937 Msa0303460:intron 25.0%
!!! AGAATTTTAGTATTCATCGA+GGG + chr2_3:60661044-60661063 Msa0303460:intron 25.0%
! ATGAAGCAAACGTTAAAAAA+GGG - chr2_3:60661327-60661346 None:intergenic 25.0%
! AATGAAGCAAACGTTAAAAA+AGG - chr2_3:60661328-60661347 None:intergenic 25.0%
!! GGTCTAAAATTATTGTGTTA+AGG - chr2_3:60661449-60661468 None:intergenic 25.0%
! GAGATAAAAGACCATTAAAA+TGG - chr2_3:60661696-60661715 None:intergenic 25.0%
!!! ATTTGTTTTGGGGTAAAATA+TGG + chr2_3:60661920-60661939 Msa0303460:intron 25.0%
!! CAACACAGATTTTTCATTAT+TGG + chr2_3:60662061-60662080 Msa0303460:intron 25.0%
! ATGTTACAAATGGTTATTTG+GGG + chr2_3:60662466-60662485 Msa0303460:intron 25.0%
!! CAATCTTAAATATCTTTTGC+AGG - chr2_3:60662624-60662643 None:intergenic 25.0%
!! CTGCAAAAGATATTTAAGAT+TGG + chr2_3:60662622-60662641 Msa0303460:intron 25.0%
! AAAAACTTTGCACAGAAATA+CGG - chr2_3:60662670-60662689 None:intergenic 25.0%
!! GCATTCTATTATGTTGATTA+GGG + chr2_3:60662838-60662857 Msa0303460:intron 25.0%
! TGATGAAATATCATTGATCA+AGG + chr2_3:60663334-60663353 Msa0303460:intron 25.0%
! AAAGATGACTAATTCTAACT+GGG - chr2_3:60663883-60663902 None:intergenic 25.0%
! TAAAGATGACTAATTCTAAC+TGG - chr2_3:60663884-60663903 None:intergenic 25.0%
! GATTCACTTATTGAAGAATT+TGG + chr2_3:60664375-60664394 Msa0303460:intron 25.0%
! GATTCACTTATTGAAGAATT+TGG + chr2_3:60664375-60664394 Msa0303460:intron 25.0%
!! TAAATCTTGTGAATCTTTTG+AGG + chr2_3:60664724-60664743 Msa0303460:intron 25.0%
! CAAAGTTAGGTAGAAATAAA+TGG - chr2_3:60664976-60664995 None:intergenic 25.0%
! TCAACTAATAATGAACATCT+CGG - chr2_3:60665103-60665122 None:intergenic 25.0%
! ATTAGTTGAAAATGCAAAAC+GGG + chr2_3:60665114-60665133 Msa0303460:three_prime_UTR 25.0%
!!! TTGGAAATGAAAGCTTTAAA+AGG + chr2_3:60665254-60665273 Msa0303460:three_prime_UTR 25.0%
!!! AATGAAAGCTTTAAAAGGTA+TGG + chr2_3:60665259-60665278 Msa0303460:three_prime_UTR 25.0%
!!! AACATAAAAAGCTTTTAAGG+AGG + chr2_3:60665300-60665319 Msa0303460:three_prime_UTR 25.0%
!!! ACATAAAAAGCTTTTAAGGA+GGG + chr2_3:60665301-60665320 Msa0303460:three_prime_UTR 25.0%
!!! ATAGTCATGTTTTGTTCAAT+TGG + chr2_3:60665390-60665409 Msa0303460:three_prime_UTR 25.0%
!!! TAGTCATGTTTTGTTCAATT+GGG + chr2_3:60665391-60665410 Msa0303460:three_prime_UTR 25.0%
!! CAATCTAAAATTTGGAAATC+AGG - chr2_3:60665532-60665551 None:intergenic 25.0%
! AAGAAAAAAAAAAAAGGAGG+GGG - chr2_3:60665558-60665577 None:intergenic 25.0%
!!! TTTTTTCTTTTCCCTTTAGT+TGG + chr2_3:60665569-60665588 Msa0303460:three_prime_UTR 25.0%
!! TTTTTCTTTTCCCTTTAGTT+GGG + chr2_3:60665570-60665589 Msa0303460:three_prime_UTR 25.0%
! GTTGGAAAAAAAAAAAAAGG+CGG + chr2_3:60665772-60665791 Msa0303460:three_prime_UTR 25.0%
!!! ATTAGTTTTGTAGTGTACAA+TGG - chr2_3:60666025-60666044 None:intergenic 25.0%
! ACACTACAAAACTAATTGTA+TGG + chr2_3:60666029-60666048 Msa0303460:three_prime_UTR 25.0%
!! GAGAATTTTGATGAAGAAGA+GGG - chr2_3:60659365-60659384 None:intergenic 30.0%
!! TGAGAATTTTGATGAAGAAG+AGG - chr2_3:60659366-60659385 None:intergenic 30.0%
!! CCCTTTTAGGTAAATTGAAA+TGG + chr2_3:60659822-60659841 Msa0303460:intron 30.0%
CCCATTTCAATTTACCTAAA+AGG - chr2_3:60659826-60659845 None:intergenic 30.0%
AGTATCAAACAAGAACTTTC+TGG + chr2_3:60660249-60660268 Msa0303460:CDS 30.0%
GTATCAAACAAGAACTTTCT+GGG + chr2_3:60660250-60660269 Msa0303460:CDS 30.0%
! TCTATCTTTAAGCATCCTTT+TGG + chr2_3:60660417-60660436 Msa0303460:intron 30.0%
!! TATGGTGGATTATGAAAAGA+AGG + chr2_3:60660499-60660518 Msa0303460:CDS 30.0%
TTATGAAAAGAAGGCAAACA+TGG + chr2_3:60660508-60660527 Msa0303460:CDS 30.0%
AAGGATGATAAATTCTGCAA+AGG - chr2_3:60660668-60660687 None:intergenic 30.0%
GCTATGCTAGTAAATACATA+TGG - chr2_3:60660703-60660722 None:intergenic 30.0%
CATCTTTCAGACAATTATGA+AGG - chr2_3:60660857-60660876 None:intergenic 30.0%
CTTCATAATTGTCTGAAAGA+TGG + chr2_3:60660855-60660874 Msa0303460:intron 30.0%
ATAATTGTCTGAAAGATGGT+TGG + chr2_3:60660859-60660878 Msa0303460:intron 30.0%
TAATTGTCTGAAAGATGGTT+GGG + chr2_3:60660860-60660879 Msa0303460:intron 30.0%
GAGTTAAGGTGATTAAGAAT+AGG - chr2_3:60660980-60660999 None:intergenic 30.0%
!! CTATGTGATGATTTTGAGAA+CGG + chr2_3:60661020-60661039 Msa0303460:intron 30.0%
!! CAGAATTTTAGTATTCATCG+AGG + chr2_3:60661043-60661062 Msa0303460:intron 30.0%
! ATATCTTTCGATCTTTTGAC+TGG + chr2_3:60661097-60661116 Msa0303460:intron 30.0%
TATAGACACATCATGATGTT+TGG + chr2_3:60661225-60661244 Msa0303460:intron 30.0%
TGAAGCAAACGTTAAAAAAG+GGG - chr2_3:60661326-60661345 None:intergenic 30.0%
! TTGCCTTATGGAACAAATTT+TGG + chr2_3:60661357-60661376 Msa0303460:CDS 30.0%
! CTACCAAAATTTGTTCCATA+AGG - chr2_3:60661363-60661382 None:intergenic 30.0%
AAGCAAAGTAAATGAAACCT+TGG - chr2_3:60661486-60661505 None:intergenic 30.0%
TGAATCTAAGTGATTGATGT+TGG + chr2_3:60661601-60661620 Msa0303460:exon 30.0%
TCCTTGACATAAAACACATT+GGG - chr2_3:60662124-60662143 None:intergenic 30.0%
ATCCTTGACATAAAACACAT+TGG - chr2_3:60662125-60662144 None:intergenic 30.0%
! TAGTGGATATTTGTAACTGT+CGG + chr2_3:60662189-60662208 Msa0303460:intron 30.0%
TAAAGTTTAAATTCCTGCAC+CGG - chr2_3:60662226-60662245 None:intergenic 30.0%
! GTCTGATTTTCTGTTTCAAT+TGG + chr2_3:60662369-60662388 Msa0303460:intron 30.0%
TGAGTGACTTATGTTACAAA+TGG + chr2_3:60662456-60662475 Msa0303460:intron 30.0%
AATGCCAATGTTCATTTCAT+GGG + chr2_3:60662504-60662523 Msa0303460:intron 30.0%
!!! TCAATGATGAGTGGATTTTT+TGG + chr2_3:60662544-60662563 Msa0303460:intron 30.0%
!! GTATTTCTGTGCAAAGTTTT+TGG + chr2_3:60662669-60662688 Msa0303460:intron 30.0%
TGTATTACCTTTGATTGAAG+TGG + chr2_3:60662751-60662770 Msa0303460:intron 30.0%
ATTGTAAGTTGTATCAATGC+AGG + chr2_3:60662786-60662805 Msa0303460:intron 30.0%
TTGTAAGTTGTATCAATGCA+GGG + chr2_3:60662787-60662806 Msa0303460:intron 30.0%
! ATTTTCCAGTTCAGTTAAGT+TGG + chr2_3:60662816-60662835 Msa0303460:intron 30.0%
! GGCATTCTATTATGTTGATT+AGG + chr2_3:60662837-60662856 Msa0303460:intron 30.0%
AAAATTGTTTGGTTAGACTC+CGG + chr2_3:60662947-60662966 Msa0303460:intron 30.0%
CAAATACTATTTACAGCATC+CGG - chr2_3:60662969-60662988 None:intergenic 30.0%
!! CTCTCTTTGAAGCTTAAAAA+GGG - chr2_3:60663223-60663242 None:intergenic 30.0%
!! TCTCTCTTTGAAGCTTAAAA+AGG - chr2_3:60663224-60663243 None:intergenic 30.0%
GAGAAACTTTATGGACTTTA+TGG - chr2_3:60663294-60663313 None:intergenic 30.0%
!!! CTCATTTTTTATAGTGGTTG+AGG + chr2_3:60663311-60663330 Msa0303460:intron 30.0%
AAAACTTCGCAGAGAAAATA+TGG - chr2_3:60663381-60663400 None:intergenic 30.0%
! TATTTTCTCTGCGAAGTTTT+TGG + chr2_3:60663381-60663400 Msa0303460:intron 30.0%
TCTAAGTTGTAGCAATGTTT+AGG + chr2_3:60663497-60663516 Msa0303460:intron 30.0%
CTAAGTTGTAGCAATGTTTA+GGG + chr2_3:60663498-60663517 Msa0303460:intron 30.0%
GATTGTCGTATTATTGCAAT+TGG - chr2_3:60663536-60663555 None:intergenic 30.0%
! TCTAACCTGGTATCTTATTT+CGG - chr2_3:60663907-60663926 None:intergenic 30.0%
AAAGATGACTAATTCTAACC+TGG - chr2_3:60663920-60663939 None:intergenic 30.0%
! TCTAACCTGGTATCTTATTT+CGG - chr2_3:60663907-60663926 None:intergenic 30.0%
AAAGATGACTAATTCTAACC+TGG - chr2_3:60663920-60663939 None:intergenic 30.0%
GATTTAGTTACTAGTGAAAC+AGG + chr2_3:60663978-60663997 Msa0303460:intron 30.0%
! AAACAGGATTTTCAGCATAA+TGG + chr2_3:60663994-60664013 Msa0303460:intron 30.0%
TCTCAAGAATTAAGATCTTC+TGG + chr2_3:60664081-60664100 Msa0303460:intron 30.0%
! AGACTTAATTTTCCTTTCCT+CGG - chr2_3:60664215-60664234 None:intergenic 30.0%
!! ATATGGGATGATTTGATTTG+CGG - chr2_3:60664263-60664282 None:intergenic 30.0%
AATCATCCCATATTGCTAAT+TGG + chr2_3:60664270-60664289 Msa0303460:intron 30.0%
! TATTGAAGAATTTGGAGTTG+TGG + chr2_3:60664419-60664438 Msa0303460:intron 30.0%
!! GATTTTAATGCCCTTCAAAA+AGG - chr2_3:60664451-60664470 None:intergenic 30.0%
!!! TTTTGAAGGGCATTAAAATC+TGG + chr2_3:60664451-60664470 Msa0303460:intron 30.0%
!! TTTGAAGGGCATTAAAATCT+GGG + chr2_3:60664452-60664471 Msa0303460:intron 30.0%
ATGTTAAGAATTCGAATCAG+TGG + chr2_3:60664539-60664558 Msa0303460:intron 30.0%
!!! GAATCTTTTGAGGTTATTAG+TGG + chr2_3:60664734-60664753 Msa0303460:intron 30.0%
AGATGAACACTAGATAAGTA+GGG - chr2_3:60664794-60664813 None:intergenic 30.0%
AAGATGAACACTAGATAAGT+AGG - chr2_3:60664795-60664814 None:intergenic 30.0%
TCTATTATTATGGTTGCAGA+TGG + chr2_3:60664998-60665017 Msa0303460:intron 30.0%
!! TTACTTTTCAGTCCCAAAAA+TGG - chr2_3:60665035-60665054 None:intergenic 30.0%
!!! ATTTTTGGGACTGAAAAGTA+AGG + chr2_3:60665034-60665053 Msa0303460:three_prime_UTR 30.0%
!! GTTTAGTATTTTTATGCCGA+TGG + chr2_3:60665480-60665499 Msa0303460:three_prime_UTR 30.0%
CAAAACACGTTGAAACATTT+CGG - chr2_3:60665678-60665697 None:intergenic 30.0%
GAAGTAAAAATTAAGCCACT+AGG + chr2_3:60665956-60665975 Msa0303460:three_prime_UTR 30.0%
AAAATTAAGCCACTAGGATT+TGG + chr2_3:60665962-60665981 Msa0303460:three_prime_UTR 30.0%
! TGTTAGCTTACAAAAACCCA+TGG + chr2_3:60659518-60659537 Msa0303460:intron 35.0%
CATCGTATGAATTTAGCGAT+TGG + chr2_3:60660090-60660109 Msa0303460:CDS 35.0%
AAACATCTTTCGTAAGTGTC+TGG - chr2_3:60660281-60660300 None:intergenic 35.0%
CACTTACGAAAGATGTTTCT+AGG + chr2_3:60660283-60660302 Msa0303460:CDS 35.0%
TCAATCTCAGATCTCATTGA+AGG - chr2_3:60660333-60660352 None:intergenic 35.0%
! TCAATGAGATCTGAGATTGA+TGG + chr2_3:60660333-60660352 Msa0303460:CDS 35.0%
! TTGTGGATTGATTGCTAACA+CGG + chr2_3:60660385-60660404 Msa0303460:intron 35.0%
! TCTTTAAGCATCCTTTTGGT+TGG + chr2_3:60660421-60660440 Msa0303460:intron 35.0%
!! CTTTAAGCATCCTTTTGGTT+GGG + chr2_3:60660422-60660441 Msa0303460:intron 35.0%
AATTGTCTGAAAGATGGTTG+GGG + chr2_3:60660861-60660880 Msa0303460:intron 35.0%
GGAGTTCATTAGTGATAACA+GGG + chr2_3:60661065-60661084 Msa0303460:intron 35.0%
! TGCTACAGTATCTGCATTTT+TGG - chr2_3:60661171-60661190 None:intergenic 35.0%
!! AACAAATTTTGGTAGTCCAG+AGG + chr2_3:60661368-60661387 Msa0303460:CDS 35.0%
!! ACAAATTTTGGTAGTCCAGA+GGG + chr2_3:60661369-60661388 Msa0303460:CDS 35.0%
! ACCTCGTATTCAATTTTCCA+AGG + chr2_3:60661466-60661485 Msa0303460:intron 35.0%
ACCTTGGAAAATTGAATACG+AGG - chr2_3:60661470-60661489 None:intergenic 35.0%
CAATCACTTAGATTCAACGA+CGG - chr2_3:60661597-60661616 None:intergenic 35.0%
!! TTGATGTTGGTGATGAAGAA+AGG + chr2_3:60661614-60661633 Msa0303460:three_prime_UTR 35.0%
!!! GTGTATGCATGCCATTTTAA+TGG + chr2_3:60661682-60661701 Msa0303460:three_prime_UTR 35.0%
!!! TGTGCTTTACTGTTTTTACC+TGG + chr2_3:60661772-60661791 Msa0303460:intron 35.0%
GGGTAAAATATGGTTTCTGT+TGG + chr2_3:60661930-60661949 Msa0303460:intron 35.0%
AATATGGTTTCTGTTGGTCA+CGG + chr2_3:60661936-60661955 Msa0303460:intron 35.0%
TTGTTTAACCAGAGCACAAA+CGG - chr2_3:60662092-60662111 None:intergenic 35.0%
!! AAGGATTGAGAGTGTGATTT+TGG + chr2_3:60662139-60662158 Msa0303460:intron 35.0%
ATCTCATATCTCTCATGTAG+TGG + chr2_3:60662172-60662191 Msa0303460:intron 35.0%
TTTGCAACTATGTGTACGAT+TGG + chr2_3:60662318-60662337 Msa0303460:intron 35.0%
CTGTTTCAATTGGCAATATG+TGG + chr2_3:60662379-60662398 Msa0303460:intron 35.0%
! AAATGGTTATTTGGGGTGTA+TGG + chr2_3:60662473-60662492 Msa0303460:intron 35.0%
GAATGCCAATGTTCATTTCA+TGG + chr2_3:60662503-60662522 Msa0303460:intron 35.0%
!! TTTCTGTGCAAAGTTTTTGG+TGG + chr2_3:60662672-60662691 Msa0303460:intron 35.0%
AACTAACAACTGATGTTTGC+TGG + chr2_3:60662706-60662725 Msa0303460:intron 35.0%
TTAATAGCAAGACAACACAG+TGG - chr2_3:60662921-60662940 None:intergenic 35.0%
TAGACTTCGGATGTTGTAAT+TGG + chr2_3:60663015-60663034 Msa0303460:intron 35.0%
TGCTTTACTGAGATTGAAGT+CGG + chr2_3:60663042-60663061 Msa0303460:intron 35.0%
TCTTTAGATTGGGCAATTTC+TGG - chr2_3:60663121-60663140 None:intergenic 35.0%
CTATTGTTATACAGATCGGT+AGG - chr2_3:60663167-60663186 None:intergenic 35.0%
AACAATAGTATTTAAGGGGG+TGG + chr2_3:60663179-60663198 Msa0303460:intron 35.0%
ACAATAGTATTTAAGGGGGT+GGG + chr2_3:60663180-60663199 Msa0303460:intron 35.0%
TGGACAATCTTGAGTCATAA+AGG - chr2_3:60663361-60663380 None:intergenic 35.0%
CTTTGCTCTTCTATGTTAGA+AGG + chr2_3:60663625-60663644 Msa0303460:intron 35.0%
!! ACTGGTCTTCAAATATTCCA+CGG - chr2_3:60663657-60663676 None:intergenic 35.0%
ATAAGATTCAGATCAGCAAC+TGG - chr2_3:60663675-60663694 None:intergenic 35.0%
GTTGCTGATCTGAATCTTAT+AGG + chr2_3:60663675-60663694 Msa0303460:intron 35.0%
GGTAAATAGCAAGTTCTACA+TGG - chr2_3:60663732-60663751 None:intergenic 35.0%
TCTTATGATCGTAATCAGCA+AGG - chr2_3:60663753-60663772 None:intergenic 35.0%
TAATTGTTGCACACCTGAAT+AGG + chr2_3:60663791-60663810 Msa0303460:intron 35.0%
TCTAACCTAGTATCCTATTC+AGG - chr2_3:60663807-60663826 None:intergenic 35.0%
GAAACTAATTATTGCACACC+TGG + chr2_3:60663848-60663867 Msa0303460:intron 35.0%
AATTATTGCACACCTGGAAT+AGG + chr2_3:60663854-60663873 Msa0303460:intron 35.0%
CTTTACCGAAATAAGATACC+AGG + chr2_3:60663899-60663918 Msa0303460:intron 35.0%
CTTTACCGAAATAAGATACC+AGG + chr2_3:60663899-60663918 Msa0303460:intron 35.0%
AAAATGATTCGACGGATACT+TGG + chr2_3:60664108-60664127 Msa0303460:intron 35.0%
TTATAGGTCTCAGTTGTTAC+TGG + chr2_3:60664180-60664199 Msa0303460:intron 35.0%
TATAGGTCTCAGTTGTTACT+GGG + chr2_3:60664181-60664200 Msa0303460:intron 35.0%
ATTTGTGTACGCAACAAAAC+TGG + chr2_3:60664237-60664256 Msa0303460:intron 35.0%
CTGGAACCAATTAGCAATAT+GGG - chr2_3:60664279-60664298 None:intergenic 35.0%
! TCTGGAACCAATTAGCAATA+TGG - chr2_3:60664280-60664299 None:intergenic 35.0%
TGCATCATATTATCCAGTGT+TGG + chr2_3:60664352-60664371 Msa0303460:intron 35.0%
GCATCATATTATCCAGTGTT+GGG + chr2_3:60664353-60664372 Msa0303460:intron 35.0%
! AAGAATTTGGAATCCAGTCT+TGG + chr2_3:60664388-60664407 Msa0303460:intron 35.0%
! AGAATTTGGAATCCAGTCTT+GGG + chr2_3:60664389-60664408 Msa0303460:intron 35.0%
! TGTGGAAACTACCTTTTTGA+AGG + chr2_3:60664437-60664456 Msa0303460:intron 35.0%
! GTGGAAACTACCTTTTTGAA+GGG + chr2_3:60664438-60664457 Msa0303460:intron 35.0%
!! TTGAAGGGCATTAAAATCTG+GGG + chr2_3:60664453-60664472 Msa0303460:intron 35.0%
!! GCTTAGAGGCTAGTTTATTT+AGG + chr2_3:60664476-60664495 Msa0303460:intron 35.0%
TCTTGGAGTAAACTTGGTTA+TGG + chr2_3:60664564-60664583 Msa0303460:intron 35.0%
CTTGGAGTAAACTTGGTTAT+GGG + chr2_3:60664565-60664584 Msa0303460:intron 35.0%
ACTTGGTTATGGGATTATAG+TGG + chr2_3:60664575-60664594 Msa0303460:intron 35.0%
TTTCCAGCTAGATTGGAAAT+TGG + chr2_3:60664662-60664681 Msa0303460:intron 35.0%
TTTCCAATTTCCAATCTAGC+TGG - chr2_3:60664668-60664687 None:intergenic 35.0%
GCTAGATTGGAAATTGGAAA+TGG + chr2_3:60664668-60664687 Msa0303460:intron 35.0%
!! AGGTTATTAGTGGACTTCAT+GGG + chr2_3:60664744-60664763 Msa0303460:intron 35.0%
AATCACTTGAATATGCAGAG+CGG - chr2_3:60664951-60664970 None:intergenic 35.0%
!! AAAACGGGTGAAGAGTATTA+TGG + chr2_3:60665129-60665148 Msa0303460:three_prime_UTR 35.0%
!! AAACGGGTGAAGAGTATTAT+GGG + chr2_3:60665130-60665149 Msa0303460:three_prime_UTR 35.0%
! GGATATATTTTACCCTGTGA+TGG + chr2_3:60665174-60665193 Msa0303460:three_prime_UTR 35.0%
TGTTATCTTGATCCATCACA+GGG - chr2_3:60665189-60665208 None:intergenic 35.0%
TATCAAAACACAACAAAGGC+AGG - chr2_3:60665220-60665239 None:intergenic 35.0%
!!! TGATATTTTAGCCGTGAGAT+TGG + chr2_3:60665235-60665254 Msa0303460:three_prime_UTR 35.0%
AGCTTTCATTTCCAATCTCA+CGG - chr2_3:60665249-60665268 None:intergenic 35.0%
!! GAAAGCTTTAAAAGGTATGG+TGG + chr2_3:60665262-60665281 Msa0303460:three_prime_UTR 35.0%
! CAAGCTGAAAGCATATAGTA+AGG - chr2_3:60665432-60665451 None:intergenic 35.0%
CTTACTATATGCTTTCAGCT+TGG + chr2_3:60665430-60665449 Msa0303460:three_prime_UTR 35.0%
TGATGAAAGAGTTTATCAGC+AGG + chr2_3:60665454-60665473 Msa0303460:three_prime_UTR 35.0%
GATGAAAGAGTTTATCAGCA+GGG + chr2_3:60665455-60665474 Msa0303460:three_prime_UTR 35.0%
CCAAAGCACAATTAAACCAT+CGG - chr2_3:60665499-60665518 None:intergenic 35.0%
GCATTTGACATTTGAGTAGA+TGG + chr2_3:60665598-60665617 Msa0303460:three_prime_UTR 35.0%
! CGAAATGTTTCAACGTGTTT+TGG + chr2_3:60665676-60665695 Msa0303460:three_prime_UTR 35.0%
!! AATGTTTCAACGTGTTTTGG+AGG + chr2_3:60665679-60665698 Msa0303460:three_prime_UTR 35.0%
!!! GTGTTTTGGAGGTTTCTATA+GGG + chr2_3:60665690-60665709 Msa0303460:three_prime_UTR 35.0%
CTCTATGAAGTTCGGATTAT+AGG - chr2_3:60665734-60665753 None:intergenic 35.0%
TAGGAAATGTACCTACTGAT+GGG + chr2_3:60665828-60665847 Msa0303460:three_prime_UTR 35.0%
!! AGTTTTGTAGTGTACAATGG+AGG - chr2_3:60666022-60666041 None:intergenic 35.0%
! GTGTTTGTGCTTACCCTTTT+AGG + chr2_3:60659809-60659828 Msa0303460:intron 40.0%
! ACAGGAGGTTGATTGATGAT+CGG + chr2_3:60660025-60660044 Msa0303460:CDS 40.0%
TGAACATGAGATGCATTCGA+GGG + chr2_3:60660125-60660144 Msa0303460:CDS 40.0%
TGAAGTTGGAGTCTGATCTT+AGG + chr2_3:60660166-60660185 Msa0303460:CDS 40.0%
! CAAACAAGAACTTTCTGGGA+AGG + chr2_3:60660254-60660273 Msa0303460:CDS 40.0%
ATGCAGAAATCCCAACCAAA+AGG - chr2_3:60660435-60660454 None:intergenic 40.0%
GCAGTCAATGGAGAAAAACA+TGG + chr2_3:60660547-60660566 Msa0303460:CDS 40.0%
GGAGAAAAACATGGTTTCCA+TGG + chr2_3:60660556-60660575 Msa0303460:CDS 40.0%
ACGAAGTTTCTCAACTTCTC+GGG - chr2_3:60660582-60660601 None:intergenic 40.0%
CACGAAGTTTCTCAACTTCT+CGG - chr2_3:60660583-60660602 None:intergenic 40.0%
TAGCATGGATGGAAGACATT+GGG + chr2_3:60660613-60660632 Msa0303460:CDS 40.0%
CATATGGAGTTAACGACTGA+AGG - chr2_3:60660687-60660706 None:intergenic 40.0%
ATTGTCTGAAAGATGGTTGG+GGG + chr2_3:60660862-60660881 Msa0303460:intron 40.0%
! AGACAAGTTAGAGAAAGCGT+GGG - chr2_3:60661002-60661021 None:intergenic 40.0%
TAGACAAGTTAGAGAAAGCG+TGG - chr2_3:60661003-60661022 None:intergenic 40.0%
GGGAGTTCATTAGTGATAAC+AGG + chr2_3:60661064-60661083 Msa0303460:intron 40.0%
AACGTTTGCTTCATTCATGC+AGG + chr2_3:60661333-60661352 Msa0303460:intron 40.0%
ATTCATGCAGGTTTGCCTTA+TGG + chr2_3:60661345-60661364 Msa0303460:intron 40.0%
!! CAAATTTTGGTAGTCCAGAG+GGG + chr2_3:60661370-60661389 Msa0303460:CDS 40.0%
!! AAATTTTGGTAGTCCAGAGG+GGG + chr2_3:60661371-60661390 Msa0303460:CDS 40.0%
ACACCATATCCATCTGCATA+TGG - chr2_3:60661408-60661427 None:intergenic 40.0%
AGATGGATATGGTGTTCACA+TGG + chr2_3:60661413-60661432 Msa0303460:CDS 40.0%
CTTTGCTTGTGCTTCTGTTT+AGG + chr2_3:60661498-60661517 Msa0303460:intron 40.0%
CAGAGAAAGGTCCTCTTTAT+GGG + chr2_3:60661527-60661546 Msa0303460:CDS 40.0%
AGAGAAAGGTCCTCTTTATG+GGG + chr2_3:60661528-60661547 Msa0303460:CDS 40.0%
ACTTCGCTAACACAGCTAAA+GGG - chr2_3:60661648-60661667 None:intergenic 40.0%
TACTTCGCTAACACAGCTAA+AGG - chr2_3:60661649-60661668 None:intergenic 40.0%
ATATGGTTTCTGTTGGTCAC+GGG + chr2_3:60661937-60661956 Msa0303460:intron 40.0%
AATCATGTGAGCTGAAGTTC+AGG + chr2_3:60662008-60662027 Msa0303460:intron 40.0%
TTGTGCTCTGGTTAAACAAG+TGG + chr2_3:60662093-60662112 Msa0303460:intron 40.0%
! GCCCAATGTGTTTTATGTCA+AGG + chr2_3:60662120-60662139 Msa0303460:intron 40.0%
CATGCCCATGAAATGAACAT+TGG - chr2_3:60662511-60662530 None:intergenic 40.0%
!! TTTGGAAGTGCTTGCTGTTA+TGG + chr2_3:60662562-60662581 Msa0303460:intron 40.0%
! GAAGTTTCCGTACTCACTTT+TGG + chr2_3:60662584-60662603 Msa0303460:intron 40.0%
! GTTGACTCCAAAAGTGAGTA+CGG - chr2_3:60662594-60662613 None:intergenic 40.0%
! TGTCATGCCACTTCAATCAA+AGG - chr2_3:60662761-60662780 None:intergenic 40.0%
GAATGCCAACTTAACTGAAC+TGG - chr2_3:60662824-60662843 None:intergenic 40.0%
AACCACAAGTATGTTGCACA+TGG + chr2_3:60662863-60662882 Msa0303460:intron 40.0%
ATCCATGTGCAACATACTTG+TGG - chr2_3:60662868-60662887 None:intergenic 40.0%
TTTACTGAGATTGAAGTCGG+TGG + chr2_3:60663045-60663064 Msa0303460:intron 40.0%
CAATAGTATTTAAGGGGGTG+GGG + chr2_3:60663181-60663200 Msa0303460:intron 40.0%
!! TTTCTCTGCGAAGTTTTTGG+TGG + chr2_3:60663384-60663403 Msa0303460:intron 40.0%
! TAACTACTGCTGTTTGCTAG+AGG + chr2_3:60663414-60663433 Msa0303460:intron 40.0%
! AACTACTGCTGTTTGCTAGA+GGG + chr2_3:60663415-60663434 Msa0303460:intron 40.0%
!!! GGGATGCATTTGTTTTGAAC+TGG + chr2_3:60663452-60663471 Msa0303460:intron 40.0%
ATCTACCATCACCATACTTG+TGG - chr2_3:60663582-60663601 None:intergenic 40.0%
!! ACAAGTATGGTGATGGTAGA+TGG + chr2_3:60663581-60663600 Msa0303460:intron 40.0%
!! CAAGTATGGTGATGGTAGAT+GGG + chr2_3:60663582-60663601 Msa0303460:intron 40.0%
!! AAGTATGGTGATGGTAGATG+GGG + chr2_3:60663583-60663602 Msa0303460:intron 40.0%
! CTGGTCTTCAAATATTCCAC+GGG - chr2_3:60663656-60663675 None:intergenic 40.0%
! GGATTTTCAGCATAATGGTC+AGG + chr2_3:60663999-60664018 Msa0303460:intron 40.0%
CTGGAGCTAAAATGATTCGA+CGG + chr2_3:60664100-60664119 Msa0303460:intron 40.0%
CAATAAGTGAATCCCAACAC+TGG - chr2_3:60664368-60664387 None:intergenic 40.0%
CAATAAGTGAATCCCAAGAC+TGG - chr2_3:60664404-60664423 None:intergenic 40.0%
!! TGAAGGGCATTAAAATCTGG+GGG + chr2_3:60664454-60664473 Msa0303460:intron 40.0%
ATTAAAATCTGGGGGCTTAG+AGG + chr2_3:60664462-60664481 Msa0303460:intron 40.0%
! AATTCGAATCAGTGGACTCT+TGG + chr2_3:60664547-60664566 Msa0303460:intron 40.0%
TAGTGGAATAGATGAACCAC+CGG + chr2_3:60664592-60664611 Msa0303460:intron 40.0%
!! GAGGTTATTAGTGGACTTCA+TGG + chr2_3:60664743-60664762 Msa0303460:intron 40.0%
!! GGTTATTAGTGGACTTCATG+GGG + chr2_3:60664745-60664764 Msa0303460:intron 40.0%
!! GAGAGCTGGAAACCATTTTT+GGG + chr2_3:60665020-60665039 Msa0303460:three_prime_UTR 40.0%
! CATAATGCTGCGAGATTTTG+CGG + chr2_3:60665073-60665092 Msa0303460:three_prime_UTR 40.0%
!! TGAAGAGTATTATGGGCTGA+GGG + chr2_3:60665137-60665156 Msa0303460:three_prime_UTR 40.0%
GTGTTATCTTGATCCATCAC+AGG - chr2_3:60665190-60665209 None:intergenic 40.0%
! AAGCATATAGTAAGGCACCA+AGG - chr2_3:60665424-60665443 None:intergenic 40.0%
CCGATGGTTTAATTGTGCTT+TGG + chr2_3:60665496-60665515 Msa0303460:three_prime_UTR 40.0%
! GGGGGTGACAATCTAAAATT+TGG - chr2_3:60665540-60665559 None:intergenic 40.0%
AATGCACAAGCCCAACTAAA+GGG - chr2_3:60665583-60665602 None:intergenic 40.0%
AAATGCACAAGCCCAACTAA+AGG - chr2_3:60665584-60665603 None:intergenic 40.0%
AGTTTCTTGCACGCTCTATT+TGG + chr2_3:60665642-60665661 Msa0303460:three_prime_UTR 40.0%
!!! CGTGTTTTGGAGGTTTCTAT+AGG + chr2_3:60665689-60665708 Msa0303460:three_prime_UTR 40.0%
TATAGGGTATGTATGCCGTT+CGG + chr2_3:60665706-60665725 Msa0303460:three_prime_UTR 40.0%
TTCGGATTATAGGATCCGAA+CGG - chr2_3:60665724-60665743 None:intergenic 40.0%
GTAGGAAATGTACCTACTGA+TGG + chr2_3:60665827-60665846 Msa0303460:three_prime_UTR 40.0%
AGGAAATGTACCTACTGATG+GGG + chr2_3:60665829-60665848 Msa0303460:three_prime_UTR 40.0%
GCATACTATCCAAATCCTAG+TGG - chr2_3:60665974-60665993 None:intergenic 40.0%
GGATTTGGATAGTATGCATG+AGG + chr2_3:60665977-60665996 Msa0303460:three_prime_UTR 40.0%
TGAGTTATACGGCGTCGTTT+GGG - chr2_3:60659278-60659297 None:intergenic 45.0%
TTGAGTTATACGGCGTCGTT+TGG - chr2_3:60659279-60659298 None:intergenic 45.0%
! TTGGTGGCTCTCTATGAACA+CGG - chr2_3:60659858-60659877 None:intergenic 45.0%
TCTAACAATGCTGGATGAGG+TGG - chr2_3:60659955-60659974 None:intergenic 45.0%
ACCTCATCCAGCATTGTTAG+AGG + chr2_3:60659954-60659973 Msa0303460:CDS 45.0%
TCCTCTAACAATGCTGGATG+AGG - chr2_3:60659958-60659977 None:intergenic 45.0%
AGCTCTTCCTCTAACAATGC+TGG - chr2_3:60659964-60659983 None:intergenic 45.0%
AAGTGCAGCATGCTGAAATG+AGG + chr2_3:60659986-60660005 Msa0303460:CDS 45.0%
CTGAACATGAGATGCATTCG+AGG + chr2_3:60660124-60660143 Msa0303460:CDS 45.0%
GAAGGCAAACATGGAGTTCA+TGG + chr2_3:60660517-60660536 Msa0303460:CDS 45.0%
ACATGGAGTTCATGGAACAG+AGG + chr2_3:60660525-60660544 Msa0303460:CDS 45.0%
CTAGCATGGATGGAAGACAT+TGG + chr2_3:60660612-60660631 Msa0303460:CDS 45.0%
AGCATGGATGGAAGACATTG+GGG + chr2_3:60660614-60660633 Msa0303460:CDS 45.0%
! TAGAGAAAGCGTGGGAGTTA+AGG - chr2_3:60660994-60661013 None:intergenic 45.0%
!! TCTTTTGACTGGCAGTGTTG+AGG + chr2_3:60661108-60661127 Msa0303460:intron 45.0%
!! CTTTTGACTGGCAGTGTTGA+GGG + chr2_3:60661109-60661128 Msa0303460:intron 45.0%
ATCCCACAAGGTGTATACGT+AGG + chr2_3:60661139-60661158 Msa0303460:intron 45.0%
TCCCACAAGGTGTATACGTA+GGG + chr2_3:60661140-60661159 Msa0303460:intron 45.0%
TCCCTACGTATACACCTTGT+GGG - chr2_3:60661144-60661163 None:intergenic 45.0%
ATCCCTACGTATACACCTTG+TGG - chr2_3:60661145-60661164 None:intergenic 45.0%
!! AATTTTGGTAGTCCAGAGGG+GGG + chr2_3:60661372-60661391 Msa0303460:CDS 45.0%
ATCCATCTGCATATGGAGGT+GGG - chr2_3:60661401-60661420 None:intergenic 45.0%
TATCCATCTGCATATGGAGG+TGG - chr2_3:60661402-60661421 None:intergenic 45.0%
CCATATCCATCTGCATATGG+AGG - chr2_3:60661405-60661424 None:intergenic 45.0%
CCTCCATATGCAGATGGATA+TGG + chr2_3:60661402-60661421 Msa0303460:CDS 45.0%
GCAGAGAAAGGTCCTCTTTA+TGG + chr2_3:60661526-60661545 Msa0303460:CDS 45.0%
AAAGGTCCTCTTTATGGGGT+GGG + chr2_3:60661532-60661551 Msa0303460:CDS 45.0%
TAGCTGTGTTAGCGAAGTAG+CGG + chr2_3:60661650-60661669 Msa0303460:three_prime_UTR 45.0%
! ACTGCAGCAATGTTTTCTCC+AGG - chr2_3:60661793-60661812 None:intergenic 45.0%
GCTCACATGATTCAACACGT+GGG - chr2_3:60662000-60662019 None:intergenic 45.0%
AGCTCACATGATTCAACACG+TGG - chr2_3:60662001-60662020 None:intergenic 45.0%
AGTTTAAATTCCTGCACCGG+TGG - chr2_3:60662223-60662242 None:intergenic 45.0%
CGATTGGATAACAATCTCCC+AGG + chr2_3:60662334-60662353 Msa0303460:intron 45.0%
TAACAATCTCCCAGGAATGC+TGG + chr2_3:60662342-60662361 Msa0303460:intron 45.0%
! GCAATATGTGGTCTTGCAAC+TGG + chr2_3:60662391-60662410 Msa0303460:intron 45.0%
TGCAAGCTCTCAATGATGAG+TGG + chr2_3:60662535-60662554 Msa0303460:intron 45.0%
! ACAACTGATGTTTGCTGGCA+TGG + chr2_3:60662711-60662730 Msa0303460:intron 45.0%
ATAGCAAGACAACACAGTGG+AGG - chr2_3:60662918-60662937 None:intergenic 45.0%
TGAGATTGAAGTCGGTGGTA+GGG + chr2_3:60663050-60663069 Msa0303460:intron 45.0%
GGAAACCACAAGTATGGTGA+TGG + chr2_3:60663574-60663593 Msa0303460:intron 45.0%
GCTCTTCTATGTTAGAAGGC+CGG + chr2_3:60663629-60663648 Msa0303460:intron 45.0%
CTCTTCTATGTTAGAAGGCC+GGG + chr2_3:60663630-60663649 Msa0303460:intron 45.0%
GCACACCTGAATAGGATACT+AGG + chr2_3:60663799-60663818 Msa0303460:intron 45.0%
CTAACTGGGTATCCTATTCC+AGG - chr2_3:60663869-60663888 None:intergenic 45.0%
! GCTAATTGGTTCCAGAGTAC+AGG + chr2_3:60664284-60664303 Msa0303460:intron 45.0%
AACTGAGTGATCCTGTACTC+TGG - chr2_3:60664298-60664317 None:intergenic 45.0%
GTGGACTCTTGGAGTAAACT+TGG + chr2_3:60664558-60664577 Msa0303460:intron 45.0%
! TGCCTAGTATGTGGAGGTTT+TGG + chr2_3:60664617-60664636 Msa0303460:intron 45.0%
! GCCTAGTATGTGGAGGTTTT+GGG + chr2_3:60664618-60664637 Msa0303460:intron 45.0%
! CCTAGTATGTGGAGGTTTTG+GGG + chr2_3:60664619-60664638 Msa0303460:intron 45.0%
AACCTGCTTTCCAGCTAGAT+TGG + chr2_3:60664655-60664674 Msa0303460:intron 45.0%
TTCCAATCTAGCTGGAAAGC+AGG - chr2_3:60664660-60664679 None:intergenic 45.0%
!! TATTAGTGGACTTCATGGGG+TGG + chr2_3:60664748-60664767 Msa0303460:intron 45.0%
GGTGGTGAATGCTAGATGTT+TGG + chr2_3:60664766-60664785 Msa0303460:intron 45.0%
! GGAGAGCTGGAAACCATTTT+TGG + chr2_3:60665019-60665038 Msa0303460:three_prime_UTR 45.0%
CGCAAAATCTCGCAGCATTA+TGG - chr2_3:60665075-60665094 None:intergenic 45.0%
!! GTGAAGAGTATTATGGGCTG+AGG + chr2_3:60665136-60665155 Msa0303460:three_prime_UTR 45.0%
! TTCAATTGGGTTGTCCTCCT+TGG + chr2_3:60665404-60665423 Msa0303460:three_prime_UTR 45.0%
! CATATAGTAAGGCACCAAGG+AGG - chr2_3:60665421-60665440 None:intergenic 45.0%
GAAAGAGTTTATCAGCAGGG+CGG + chr2_3:60665458-60665477 Msa0303460:three_prime_UTR 45.0%
GTGCAAGAAACTCATAGGGT+GGG - chr2_3:60665634-60665653 None:intergenic 45.0%
GAGCGTGCAAGAAACTCATA+GGG - chr2_3:60665638-60665657 None:intergenic 45.0%
AGAGCGTGCAAGAAACTCAT+AGG - chr2_3:60665639-60665658 None:intergenic 45.0%
GGAAATGTACCTACTGATGG+GGG + chr2_3:60665830-60665849 Msa0303460:three_prime_UTR 45.0%
TCTTCCTACTCGCGTCTAAA+TGG - chr2_3:60665856-60665875 None:intergenic 45.0%
GATAGTATGCATGAGGTCCT+AGG + chr2_3:60665984-60666003 Msa0303460:three_prime_UTR 45.0%
!!! TTTATTTTTCAAATTATTAT+CGG + chr2_3:60659723-60659742 Msa0303460:intron 5.0%
TGTCGTGTTGGATCCTGACA+CGG - chr2_3:60659674-60659693 None:intergenic 50.0%
TACACGTGTCAGTGTCGTGT+TGG - chr2_3:60659686-60659705 None:intergenic 50.0%
CACCAATGAGTTCCCGAAGA+GGG + chr2_3:60659872-60659891 Msa0303460:CDS 50.0%
TACCCTCTTCGGGAACTCAT+TGG - chr2_3:60659877-60659896 None:intergenic 50.0%
!! TTCCCGAAGAGGGTATCCAT+CGG + chr2_3:60659882-60659901 Msa0303460:CDS 50.0%
TTCCGATGGATACCCTCTTC+GGG - chr2_3:60659887-60659906 None:intergenic 50.0%
CTTCCGATGGATACCCTCTT+CGG - chr2_3:60659888-60659907 None:intergenic 50.0%
! ATATGCTGTCGTGGCATTGG+TGG - chr2_3:60659931-60659950 None:intergenic 50.0%
GGAATATGCTGTCGTGGCAT+TGG - chr2_3:60659934-60659953 None:intergenic 50.0%
TGAGGTGGAATATGCTGTCG+TGG - chr2_3:60659940-60659959 None:intergenic 50.0%
TGCAGCATGCTGAAATGAGG+AGG + chr2_3:60659989-60660008 Msa0303460:CDS 50.0%
ACCAAGAACTGATGCGTGCT+AGG + chr2_3:60660361-60660380 Msa0303460:CDS 50.0%
ACCTAGCACGCATCAGTTCT+TGG - chr2_3:60660365-60660384 None:intergenic 50.0%
ACTGATGCGTGCTAGGTTTG+TGG + chr2_3:60660368-60660387 Msa0303460:intron 50.0%
CATGGAACAGAGGCAGTCAA+TGG + chr2_3:60660535-60660554 Msa0303460:CDS 50.0%
TTTCTCAACTTCTCGGGCCA+TGG - chr2_3:60660576-60660595 None:intergenic 50.0%
TTCCCACCTCCATATGCAGA+TGG + chr2_3:60661396-60661415 Msa0303460:CDS 50.0%
GTTTAGGCTGCTGCAGAGAA+AGG + chr2_3:60661514-60661533 Msa0303460:intron 50.0%
GAAAGGTCCTCTTTATGGGG+TGG + chr2_3:60661531-60661550 Msa0303460:CDS 50.0%
ATTCAACGACGGTTTGAGCG+AGG - chr2_3:60661586-60661605 None:intergenic 50.0%
AACACAGCTAAAGGGATGGC+AGG - chr2_3:60661640-60661659 None:intergenic 50.0%
CGCTAACACAGCTAAAGGGA+TGG - chr2_3:60661644-60661663 None:intergenic 50.0%
AACTCAGCATTGCAGCCATG+AGG + chr2_3:60661964-60661983 Msa0303460:intron 50.0%
GTGGGAGCTACAAAACCTCA+TGG - chr2_3:60661982-60662001 None:intergenic 50.0%
CAGACATCACCAGCATTCCT+GGG - chr2_3:60662354-60662373 None:intergenic 50.0%
TCAGACATCACCAGCATTCC+TGG - chr2_3:60662355-60662374 None:intergenic 50.0%
! TGTGGTCTTGCAACTGGTGA+AGG + chr2_3:60662397-60662416 Msa0303460:intron 50.0%
! ACTGATGTTTGCTGGCATGG+AGG + chr2_3:60662714-60662733 Msa0303460:intron 50.0%
! CTGATGTTTGCTGGCATGGA+GGG + chr2_3:60662715-60662734 Msa0303460:intron 50.0%
CTGAGATTGAAGTCGGTGGT+AGG + chr2_3:60663049-60663068 Msa0303460:intron 50.0%
GAAGTCGGTGGTAGGGATAT+AGG + chr2_3:60663057-60663076 Msa0303460:intron 50.0%
TGTCTGGACTCTGGTGGTAT+TGG + chr2_3:60663258-60663277 Msa0303460:intron 50.0%
! TACTGCTGTTTGCTAGAGGG+TGG + chr2_3:60663418-60663437 Msa0303460:intron 50.0%
TAGAGGGTGGCTGTTGTTAG+TGG + chr2_3:60663431-60663450 Msa0303460:intron 50.0%
AGAGGGTGGCTGTTGTTAGT+GGG + chr2_3:60663432-60663451 Msa0303460:intron 50.0%
GGATGGGGAAACCACAAGTA+TGG + chr2_3:60663568-60663587 Msa0303460:intron 50.0%
CTTCAAATATTCCACGGGCC+CGG - chr2_3:60663651-60663670 None:intergenic 50.0%
ATTCGACGGATACTTGGAGC+TGG + chr2_3:60664114-60664133 Msa0303460:intron 50.0%
TGGAGCTGGCTGAAGTTGTA+TGG + chr2_3:60664128-60664147 Msa0303460:intron 50.0%
AGCTGGCTGAAGTTGTATGG+TGG + chr2_3:60664131-60664150 Msa0303460:intron 50.0%
GTTACTGGGCTTCTAATCCG+AGG + chr2_3:60664195-60664214 Msa0303460:intron 50.0%
TGGGCTTCTAATCCGAGGAA+AGG + chr2_3:60664200-60664219 Msa0303460:intron 50.0%
CCTCCACATACTAGGCAAAC+CGG - chr2_3:60664614-60664633 None:intergenic 50.0%
CCCCAAAACCTCCACATACT+AGG - chr2_3:60664622-60664641 None:intergenic 50.0%
TATGGTTGCAGATGGAGAGC+TGG + chr2_3:60665006-60665025 Msa0303460:intron 50.0%
TCGCAGCATTATGGTGTGTG+GGG - chr2_3:60665066-60665085 None:intergenic 50.0%
CTCGCAGCATTATGGTGTGT+GGG - chr2_3:60665067-60665086 None:intergenic 50.0%
TCTCGCAGCATTATGGTGTG+TGG - chr2_3:60665068-60665087 None:intergenic 50.0%
! ATTATGGGCTGAGGGCAAGT+AGG + chr2_3:60665145-60665164 Msa0303460:three_prime_UTR 50.0%
! TTATGGGCTGAGGGCAAGTA+GGG + chr2_3:60665146-60665165 Msa0303460:three_prime_UTR 50.0%
CGTGCAAGAAACTCATAGGG+TGG - chr2_3:60665635-60665654 None:intergenic 50.0%
TCCGAACTTCATAGAGCGTG+CGG + chr2_3:60665738-60665757 Msa0303460:three_prime_UTR 50.0%
TCTAAATGGCCCCCATCAGT+AGG - chr2_3:60665842-60665861 None:intergenic 50.0%
GGAGGTAACGACTTCAACCT+AGG - chr2_3:60666004-60666023 None:intergenic 50.0%
AAGAAGAGGGTCGCGTACGA+TGG - chr2_3:60659352-60659371 None:intergenic 55.0%
ATGGAAGACGTGTCCGTGTC+AGG + chr2_3:60659658-60659677 Msa0303460:intron 55.0%
CCTCTTCGGGAACTCATTGG+TGG - chr2_3:60659874-60659893 None:intergenic 55.0%
CCACCAATGAGTTCCCGAAG+AGG + chr2_3:60659871-60659890 Msa0303460:CDS 55.0%
!! CGAAGAGGGTATCCATCGGA+AGG + chr2_3:60659886-60659905 Msa0303460:CDS 55.0%
CGAGCATAAGGACCTTCCGA+TGG - chr2_3:60659901-60659920 None:intergenic 55.0%
TCGGAAGGTCCTTATGCTCG+CGG + chr2_3:60659901-60659920 Msa0303460:CDS 55.0%
GCATGCTGAAATGAGGAGGC+TGG + chr2_3:60659993-60660012 Msa0303460:CDS 55.0%
TGCTGAAATGAGGAGGCTGG+TGG + chr2_3:60659996-60660015 Msa0303460:CDS 55.0%
TGAAATGAGGAGGCTGGTGG+CGG + chr2_3:60659999-60660018 Msa0303460:CDS 55.0%
!! TCGTGCTGAGCTTGCTAGCA+TGG + chr2_3:60660598-60660617 Msa0303460:CDS 55.0%
!! GCTGAGCTTGCTAGCATGGA+TGG + chr2_3:60660602-60660621 Msa0303460:CDS 55.0%
GATGGAAGACATTGGGGAGC+TGG + chr2_3:60660620-60660639 Msa0303460:CDS 55.0%
! TTGACTGGCAGTGTTGAGGG+TGG + chr2_3:60661112-60661131 Msa0303460:intron 55.0%
GCAGTACCCACCCCATAAAG+AGG - chr2_3:60661541-60661560 None:intergenic 55.0%
! ATGGGGTGGGTACTGCTTCT+AGG + chr2_3:60661545-60661564 Msa0303460:CDS 55.0%
!! TGGTGTTGCCGTTTGTGCTC+TGG + chr2_3:60662081-60662100 Msa0303460:intron 55.0%
ACTGTCGGAGAAGTCACCAC+CGG + chr2_3:60662204-60662223 Msa0303460:intron 55.0%
! ATGTTTGCTGGCATGGAGGG+TGG + chr2_3:60662718-60662737 Msa0303460:intron 55.0%
CCACATACTAGGCAAACCGG+TGG - chr2_3:60664611-60664630 None:intergenic 55.0%
!! CCACCGGTTTGCCTAGTATG+TGG + chr2_3:60664608-60664627 Msa0303460:intron 55.0%
! CCGGTTTGCCTAGTATGTGG+AGG + chr2_3:60664611-60664630 Msa0303460:intron 55.0%
CCCGCACGCTCTATGAAGTT+CGG - chr2_3:60665742-60665761 None:intergenic 55.0%
CCGAACTTCATAGAGCGTGC+GGG + chr2_3:60665739-60665758 Msa0303460:three_prime_UTR 55.0%
AGAGCGTGCGGGAAACTCAT+AGG + chr2_3:60665750-60665769 Msa0303460:three_prime_UTR 55.0%
CGTGCGGGAAACTCATAGGT+TGG + chr2_3:60665754-60665773 Msa0303460:three_prime_UTR 55.0%
CGGAAGGTCCTTATGCTCGC+GGG + chr2_3:60659902-60659921 Msa0303460:CDS 60.0%
!! TGCTGTCGTGGCATTGGTGG+TGG - chr2_3:60659928-60659947 None:intergenic 60.0%
AGACCTTGCAGCTGCGAAGG+AGG + chr2_3:60660062-60660081 Msa0303460:CDS 60.0%
! ACTGGCAGTGTTGAGGGTGG+TGG + chr2_3:60661115-60661134 Msa0303460:intron 60.0%
! GAGGGTGGTGGTATCCCACA+AGG + chr2_3:60661127-60661146 Msa0303460:intron 60.0%
CTGAGGGCAAGTAGGGCACA+GGG + chr2_3:60665153-60665172 Msa0303460:three_prime_UTR 60.0%
GGGGCCATTTAGACGCGAGT+AGG + chr2_3:60665849-60665868 Msa0303460:three_prime_UTR 60.0%
!! GGAGGCTGGTGGCGGATAAC+AGG + chr2_3:60660007-60660026 Msa0303460:CDS 65.0%
!! GGCTGGTGGCGGATAACAGG+AGG + chr2_3:60660010-60660029 Msa0303460:CDS 65.0%
GCGAGACCTTGCAGCTGCGA+AGG + chr2_3:60660059-60660078 Msa0303460:CDS 65.0%
GCTCCTCCTTCGCAGCTGCA+AGG - chr2_3:60660068-60660087 None:intergenic 65.0%
GGAGAAGTCACCACCGGTGC+AGG + chr2_3:60662210-60662229 Msa0303460:intron 65.0%
TTGCTGGCATGGAGGGTGGC+TGG + chr2_3:60662722-60662741 Msa0303460:intron 65.0%
ATGTTAGAAGGCCGGGCCCG+TGG + chr2_3:60663637-60663656 Msa0303460:intron 65.0%
GCTGAGGGCAAGTAGGGCAC+AGG + chr2_3:60665152-60665171 Msa0303460:three_prime_UTR 65.0%
! GGTGGTGGCCCGCGAGCATA+AGG - chr2_3:60659913-60659932 None:intergenic 70.0%
GGAGGTGGGAAACCCCCCTC+TGG - chr2_3:60661387-60661406 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 60659257 60666071 60659257 ID=Msa0303460;Name=Msa0303460
chr2_3 mRNA 60659257 60666071 60659257 ID=Msa0303460-mRNA-1;Parent=Msa0303460;Name=Msa0303460-mRNA-1;_AED=0.04;_eAED=0.04;_QI=182|1|1|1|0.6|0.5|6|1155|283
chr2_3 exon 60659257 60659428 60659257 ID=Msa0303460-mRNA-1:exon:19780;Parent=Msa0303460-mRNA-1
chr2_3 exon 60659831 60660382 60659831 ID=Msa0303460-mRNA-1:exon:19781;Parent=Msa0303460-mRNA-1
chr2_3 exon 60660496 60660641 60660496 ID=Msa0303460-mRNA-1:exon:19782;Parent=Msa0303460-mRNA-1
chr2_3 exon 60661355 60661434 60661355 ID=Msa0303460-mRNA-1:exon:19783;Parent=Msa0303460-mRNA-1
chr2_3 exon 60661520 60661703 60661520 ID=Msa0303460-mRNA-1:exon:19784;Parent=Msa0303460-mRNA-1
chr2_3 exon 60665017 60666071 60665017 ID=Msa0303460-mRNA-1:exon:19785;Parent=Msa0303460-mRNA-1
chr2_3 five_prime_UTR 60659257 60659428 60659257 ID=Msa0303460-mRNA-1:five_prime_utr;Parent=Msa0303460-mRNA-1
chr2_3 five_prime_UTR 60659831 60659840 60659831 ID=Msa0303460-mRNA-1:five_prime_utr;Parent=Msa0303460-mRNA-1
chr2_3 CDS 60659841 60660382 60659841 ID=Msa0303460-mRNA-1:cds;Parent=Msa0303460-mRNA-1
chr2_3 CDS 60660496 60660641 60660496 ID=Msa0303460-mRNA-1:cds;Parent=Msa0303460-mRNA-1
chr2_3 CDS 60661355 60661434 60661355 ID=Msa0303460-mRNA-1:cds;Parent=Msa0303460-mRNA-1
chr2_3 CDS 60661520 60661603 60661520 ID=Msa0303460-mRNA-1:cds;Parent=Msa0303460-mRNA-1
chr2_3 three_prime_UTR 60661604 60661703 60661604 ID=Msa0303460-mRNA-1:three_prime_utr;Parent=Msa0303460-mRNA-1
chr2_3 three_prime_UTR 60665017 60666071 60665017 ID=Msa0303460-mRNA-1:three_prime_utr;Parent=Msa0303460-mRNA-1
Gene Sequence

>Msa0303460

ATGGGATCAAGACACCGTGTTCATAGAGAGCCACCAATGAGTTCCCGAAGAGGGTATCCATCGGAAGGTCCTTATGCTCGCGGGCCACCACCAATGCCACGACAGCATATTCCACCTCATCCAGCATTGTTAGAGGAAGAGCTTGAAGTGCAGCATGCTGAAATGAGGAGGCTGGTGGCGGATAACAGGAGGTTGATTGATGATCGGATGACGTTGCAGCGAGACCTTGCAGCTGCGAAGGAGGAGCTTCATCGTATGAATTTAGCGATTGGCGATATTCGTGCTGAACATGAGATGCATTCGAGGGAGCTTGTTGATAAAAATATGAAGTTGGAGTCTGATCTTAGGTCGACTGAGCCGTTGAAGAATGAAGTTATACAACTGCGAGCTGAAGTTCAAAAACTTAGTAGTATCAAACAAGAACTTTCTGGGAAGGTCCAGACACTTACGAAAGATGTTTCTAGGTTACAGTCTGATAATCAACAAATTCCTTCAATGAGATCTGAGATTGATGGTTTGCACCAAGAACTGATGCGTGCTAGAACTATGGTGGATTATGAAAAGAAGGCAAACATGGAGTTCATGGAACAGAGGCAGTCAATGGAGAAAAACATGGTTTCCATGGCCCGAGAAGTTGAGAAACTTCGTGCTGAGCTTGCTAGCATGGATGGAAGACATTGGGGAGCTGGTTTGCCTTATGGAACAAATTTTGGTAGTCCAGAGGGGGGTTTCCCACCTCCATATGCAGATGGATATGGTGTTCACATGGCTGCTGCAGAGAAAGGTCCTCTTTATGGGGTGGGTACTGCTTCTAGGAAAGCACACGAGAAGCCTCGCTCAAACCGTCGTTGA
Protein sequence

>Msa0303460

MGSRHRVHREPPMSSRRGYPSEGPYARGPPPMPRQHIPPHPALLEEELEVQHAEMRRLVADNRRLIDDRMTLQRDLAAAKEELHRMNLAIGDIRAEHEMHSRELVDKNMKLESDLRSTEPLKNEVIQLRAEVQKLSSIKQELSGKVQTLTKDVSRLQSDNQQIPSMRSEIDGLHQELMRARTMVDYEKKANMEFMEQRQSMEKNMVSMAREVEKLRAELASMDGRHWGAGLPYGTNFGSPEGGFPPPYADGYGVHMAAAEKGPLYGVGTASRKAHEKPRSNRR*