Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0341330 | XP_003597926.2 | 96.465 | 396 | 13 | 1 | 1 | 395 | 1 | 396 | 0.0 | 770 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0341330 | sp|O80358|FPG_ARATH | 70.088 | 341 | 97 | 4 | 1 | 336 | 1 | 341 | 7.74e-169 | 480 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016670 | Msa0341330 | 0.815880 | 7.369509e-52 | -8.615850e-47 |
| Msa0027230 | Msa0341330 | 0.803942 | 2.739561e-49 | -8.615850e-47 |
| Msa0032090 | Msa0341330 | 0.819713 | 1.004938e-52 | -8.615850e-47 |
| Msa0032430 | Msa0341330 | 0.811212 | 7.838855e-51 | -8.615850e-47 |
| Msa0032920 | Msa0341330 | -0.813293 | 2.754465e-51 | -8.615850e-47 |
| Msa0036850 | Msa0341330 | 0.849524 | 3.059916e-60 | -8.615850e-47 |
| Msa0047070 | Msa0341330 | 0.806565 | 7.734863e-50 | -8.615850e-47 |
| Msa0079380 | Msa0341330 | 0.803656 | 3.141905e-49 | -8.615850e-47 |
| Msa0094120 | Msa0341330 | 0.813072 | 3.079627e-51 | -8.615850e-47 |
| Msa0110970 | Msa0341330 | 0.800599 | 1.336520e-48 | -8.615850e-47 |
| Msa0122970 | Msa0341330 | 0.806838 | 6.773114e-50 | -8.615850e-47 |
| Msa0124060 | Msa0341330 | 0.808006 | 3.827604e-50 | -8.615850e-47 |
| Msa0146260 | Msa0341330 | 0.803246 | 3.820262e-49 | -8.615850e-47 |
| Msa0168500 | Msa0341330 | 0.810416 | 1.165492e-50 | -8.615850e-47 |
| Msa0172070 | Msa0341330 | 0.811631 | 6.356718e-51 | -8.615850e-47 |
| Msa0225740 | Msa0341330 | 0.814353 | 1.608721e-51 | -8.615850e-47 |
| Msa0255090 | Msa0341330 | 0.849999 | 2.254342e-60 | -8.615850e-47 |
| Msa0259380 | Msa0341330 | 0.855024 | 8.325933e-62 | -8.615850e-47 |
| Msa0292400 | Msa0341330 | 0.827092 | 1.893394e-54 | -8.615850e-47 |
| Msa0294160 | Msa0341330 | 0.829414 | 5.217452e-55 | -8.615850e-47 |
| Msa0303390 | Msa0341330 | 0.806335 | 8.646932e-50 | -8.615850e-47 |
| Msa0318700 | Msa0341330 | 0.802189 | 6.314007e-49 | -8.615850e-47 |
| Msa0341330 | Msa0386850 | 0.810371 | 1.191949e-50 | -8.615850e-47 |
| Msa0341330 | Msa0410500 | 0.811194 | 7.909569e-51 | -8.615850e-47 |
| Msa0341330 | Msa0428150 | 0.810789 | 9.679707e-51 | -8.615850e-47 |
| Msa0341330 | Msa0434920 | 0.803857 | 2.852921e-49 | -8.615850e-47 |
| Msa0341330 | Msa0462500 | 0.807096 | 5.972041e-50 | -8.615850e-47 |
| Msa0341330 | Msa0467490 | 0.819336 | 1.225579e-52 | -8.615850e-47 |
| Msa0341330 | Msa0479170 | 0.803696 | 3.082443e-49 | -8.615850e-47 |
| Msa0341330 | Msa0532070 | 0.845258 | 4.544041e-59 | -8.615850e-47 |
| Msa0341330 | Msa0569200 | 0.815980 | 6.999657e-52 | -8.615850e-47 |
| Msa0341330 | Msa0620990 | 0.854265 | 1.380990e-61 | -8.615850e-47 |
| Msa0341330 | Msa0626450 | 0.800004 | 1.766544e-48 | -8.615850e-47 |
| Msa0341330 | Msa0626490 | 0.804673 | 1.929644e-49 | -8.615850e-47 |
| Msa0341330 | Msa0639430 | 0.813192 | 2.899280e-51 | -8.615850e-47 |
| Msa0341330 | Msa0683570 | 0.802850 | 4.611853e-49 | -8.615850e-47 |
| Msa0341330 | Msa0691980 | 0.807601 | 4.668717e-50 | -8.615850e-47 |
| Msa0341330 | Msa0750880 | 0.802777 | 4.776182e-49 | -8.615850e-47 |
| Msa0341330 | Msa0770720 | 0.806961 | 6.378351e-50 | -8.615850e-47 |
| Msa0341330 | Msa0796530 | 0.808331 | 3.264594e-50 | -8.615850e-47 |
| Msa0341330 | Msa0945110 | 0.804471 | 2.125754e-49 | -8.615850e-47 |
| Msa0341330 | Msa1029250 | 0.803708 | 3.064631e-49 | -8.615850e-47 |
| Msa0341330 | Msa1037640 | 0.827207 | 1.776698e-54 | -8.615850e-47 |
| Msa0341330 | Msa1045140 | 0.802352 | 5.842402e-49 | -8.615850e-47 |
| Msa0341330 | Msa1051830 | 0.810919 | 9.070794e-51 | -8.615850e-47 |
| Msa0341330 | Msa1104140 | 0.806427 | 8.270850e-50 | -8.615850e-47 |
| Msa0341330 | Msa1106700 | 0.805296 | 1.429714e-49 | -8.615850e-47 |
| Msa0341330 | Msa1111130 | 0.806756 | 7.046645e-50 | -8.615850e-47 |
| Msa0341330 | Msa1113340 | 0.821944 | 3.084162e-53 | -8.615850e-47 |
| Msa0341330 | Msa1124110 | 0.811592 | 6.483256e-51 | -8.615850e-47 |
| Msa0341330 | Msa1143650 | 0.818992 | 1.467066e-52 | -8.615850e-47 |
| Msa0341330 | Msa1168950 | 0.811870 | 5.638971e-51 | -8.615850e-47 |
| Msa0341330 | Msa1169040 | 0.810564 | 1.082559e-50 | -8.615850e-47 |
| Msa0341330 | Msa1201650 | 0.814302 | 1.651241e-51 | -8.615850e-47 |
| Msa0341330 | Msa1209460 | 0.813003 | 3.188504e-51 | -8.615850e-47 |
| Msa0341330 | Msa1252190 | 0.848871 | 4.648831e-60 | -8.615850e-47 |
| Msa0341330 | Msa1254610 | 0.806485 | 8.038827e-50 | -8.615850e-47 |
| Msa0341330 | Msa1271990 | 0.801548 | 8.547061e-49 | -8.615850e-47 |
| Msa0341330 | Msa1274060 | 0.809496 | 1.838640e-50 | -8.615850e-47 |
| Msa0341330 | Msa1292830 | 0.832106 | 1.142159e-55 | -8.615850e-47 |
| Msa0341330 | Msa1353060 | 0.807032 | 6.161939e-50 | -8.615850e-47 |
| Msa0341330 | Msa1369150 | 0.817368 | 3.418940e-52 | -8.615850e-47 |
| Msa0341330 | Msa1370010 | 0.805861 | 1.087799e-49 | -8.615850e-47 |
| Msa0341330 | Msa1374040 | 0.804339 | 2.265707e-49 | -8.615850e-47 |
| Msa0341330 | Msa1374120 | 0.812919 | 3.327748e-51 | -8.615850e-47 |
| Msa0341330 | Msa1417420 | 0.808356 | 3.223961e-50 | -8.615850e-47 |
| Msa0341330 | Msa1418090 | 0.820776 | 5.736889e-53 | -8.615850e-47 |
| Msa0341330 | Msa1432950 | 0.848765 | 4.976651e-60 | -8.615850e-47 |
| Msa0341330 | Msa1459380 | 0.846491 | 2.100339e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0341330 | MtrunA17_Chr2g0333271 | 96.465 | 396 | 13 | 1 | 1 | 395 | 1 | 396 | 0.0 | 770 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0341330 | AT1G52500.2 | 70.088 | 341 | 97 | 4 | 1 | 336 | 1 | 341 | 7.87e-170 | 480 |
| Msa0341330 | AT1G52500.4 | 73.333 | 285 | 71 | 2 | 1 | 284 | 1 | 281 | 6.45e-155 | 438 |
| Msa0341330 | AT1G52500.1 | 73.643 | 258 | 65 | 2 | 1 | 257 | 1 | 256 | 7.20e-142 | 405 |
| Msa0341330 | AT1G52500.3 | 73.643 | 258 | 65 | 2 | 1 | 257 | 1 | 256 | 7.20e-142 | 405 |
| Msa0341330 | AT1G52500.5 | 77.477 | 222 | 50 | 0 | 1 | 222 | 1 | 222 | 1.68e-130 | 374 |
Find 113 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACGGCGCTGACGAGAATT+TGG | 0.221084 | 2_4:-62804337 | Msa0341330:CDS |
| ATATTTCAGGCATTGGAAAT+TGG | 0.240383 | 2_4:-62807009 | Msa0341330:CDS |
| TAAAGCTAAGTAGCAACTTT+TGG | 0.251634 | 2_4:-62804076 | Msa0341330:exon |
| TTCTTTGAGGCTTTCCCTCT+GGG | 0.288446 | 2_4:+62804384 | None:intergenic |
| CCTCTGCAGAGCTATATTTC+AGG | 0.317206 | 2_4:-62807022 | Msa0341330:intron |
| GTAGTCAATATCCCACTAAT+TGG | 0.319108 | 2_4:-62805383 | Msa0341330:CDS |
| TTGCTGTAACAAAGTATAAA+AGG | 0.321116 | 2_4:-62809703 | Msa0341330:intron |
| TTTCTTTGAGGCTTTCCCTC+TGG | 0.329200 | 2_4:+62804383 | None:intergenic |
| GGTCTATGTGATATTCTCAT+TGG | 0.333751 | 2_4:-62803845 | Msa0341330:three_prime_UTR |
| AACCAGGCTCGGGGACTAAT+AGG | 0.335713 | 2_4:-62804170 | Msa0341330:CDS |
| CATTCAGCATGGGTTTAAAT+CGG | 0.335808 | 2_4:+62810157 | None:intergenic |
| ACCATCAACAAAAGCTTTGC+CGG | 0.348394 | 2_4:+62805335 | None:intergenic |
| TATTTCAGGCATTGGAAATT+GGG | 0.367779 | 2_4:-62807008 | Msa0341330:CDS |
| TCACAAGTGTTAAAAGAAAC+TGG | 0.374623 | 2_4:-62804411 | Msa0341330:CDS |
| GAATTCGAAGCTTCCGTTGT+TGG | 0.375577 | 2_4:-62809925 | Msa0341330:CDS |
| CCGTTTCCCTCTTTCCAATT+CGG | 0.381749 | 2_4:-62809841 | Msa0341330:intron |
| AGATTCGCATGATAACGTTT+TGG | 0.382486 | 2_4:-62803969 | Msa0341330:three_prime_UTR |
| ATCAGGTCCAAGCTCAGATA+TGG | 0.382869 | 2_4:+62807374 | None:intergenic |
| TCGGAAAAGCAGTTGAAGTT+GGG | 0.394804 | 2_4:-62805413 | Msa0341330:CDS |
| TGGTTTAGTGTATGCTTGCT+TGG | 0.412212 | 2_4:-62803825 | Msa0341330:three_prime_UTR |
| ATTTCATCACCGCAGGTGGC+AGG | 0.416756 | 2_4:-62804557 | Msa0341330:CDS |
| CAGAGCTATATTTCAGGCAT+TGG | 0.419170 | 2_4:-62807016 | Msa0341330:CDS |
| AATTCGAAGCTTCCGTTGTT+GGG | 0.422866 | 2_4:-62809924 | Msa0341330:CDS |
| GTCGGAAAAGCAGTTGAAGT+TGG | 0.423898 | 2_4:-62805414 | Msa0341330:CDS |
| CAATCAAAGAAACGTGTTCA+AGG | 0.450717 | 2_4:-62804126 | Msa0341330:CDS |
| GCTGCAGCTAGACGATGGTT+TGG | 0.452703 | 2_4:-62807542 | Msa0341330:intron |
| ATTGTCATCGTCACTTTCCT+CGG | 0.455015 | 2_4:+62804245 | None:intergenic |
| CAGATAGCTTCTAGCCTGTC+AGG | 0.458232 | 2_4:-62805713 | Msa0341330:CDS |
| TTCCTATTAGTCCCCGAGCC+TGG | 0.459245 | 2_4:+62804168 | None:intergenic |
| GTAACTGTGTTAGGTATGGC+TGG | 0.461478 | 2_4:-62809746 | Msa0341330:intron |
| GCCGGAGCTACCGGAGGTAG+AGG | 0.468617 | 2_4:-62810046 | Msa0341330:CDS |
| ATTCAGCATGGGTTTAAATC+GGG | 0.469331 | 2_4:+62810158 | None:intergenic |
| CAAGAAGAAAACTGAAATCA+AGG | 0.473543 | 2_4:-62807304 | Msa0341330:CDS |
| GAATATTCTGATCGCACGAT+TGG | 0.477984 | 2_4:+62803745 | None:intergenic |
| GGTTTAGTGTATGCTTGCTT+GGG | 0.479354 | 2_4:-62803824 | Msa0341330:three_prime_UTR |
| GAGCACAATGCCGGAGCTAC+CGG | 0.482856 | 2_4:-62810055 | Msa0341330:exon |
| GAAAAGAAGAAACCAGGCTC+GGG | 0.483523 | 2_4:-62804180 | Msa0341330:CDS |
| ACATTGAAGCTCCCGTTAGT+AGG | 0.483735 | 2_4:-62803774 | Msa0341330:three_prime_UTR |
| GGAAAGTCTCAAATCAAAGA+AGG | 0.484998 | 2_4:-62804316 | Msa0341330:CDS |
| CATTCCCGTGAAAAGAAGCC+CGG | 0.485250 | 2_4:-62805354 | Msa0341330:CDS |
| GCCTCTACCTCCGGTAGCTC+CGG | 0.498178 | 2_4:+62810045 | None:intergenic |
| GGAATGAAATATCCAATTAG+TGG | 0.507785 | 2_4:+62805371 | None:intergenic |
| GACTAATAGGAAACAGACTA+AGG | 0.508838 | 2_4:-62804157 | Msa0341330:CDS |
| CTGTTGTTCTAGAGCAGAGT+AGG | 0.509083 | 2_4:+62804021 | None:intergenic |
| TTGAGCAGCTTTCTCCTGAC+AGG | 0.509313 | 2_4:+62805699 | None:intergenic |
| CTGTAAATGACGAGGATGAA+TGG | 0.513522 | 2_4:-62809023 | Msa0341330:CDS |
| CTTCTCGCCGCCTCTACCTC+CGG | 0.514260 | 2_4:+62810036 | None:intergenic |
| TCTATATAAGTGCATTAAAG+AGG | 0.514418 | 2_4:-62805675 | Msa0341330:intron |
| AGTAAACTCGTCAAGTGTCA+TGG | 0.514613 | 2_4:+62807338 | None:intergenic |
| CCATCAACAAAAGCTTTGCC+GGG | 0.519750 | 2_4:+62805336 | None:intergenic |
| TCAGGTCCAAGCTCAGATAT+GGG | 0.520534 | 2_4:+62807375 | None:intergenic |
| TGTTATACATTCATTCAGCA+TGG | 0.524018 | 2_4:+62810146 | None:intergenic |
| GGCTGGTGCTGTATACATCA+AGG | 0.525973 | 2_4:-62809729 | Msa0341330:CDS |
| GTTATACATTCATTCAGCAT+GGG | 0.526055 | 2_4:+62810147 | None:intergenic |
| GAAAGTCTCAAATCAAAGAA+GGG | 0.526412 | 2_4:-62804315 | Msa0341330:CDS |
| ATCATGCGAATCTATGCTGC+AGG | 0.529383 | 2_4:+62803979 | None:intergenic |
| CGGTGGAAGAGAACTGTATC+GGG | 0.530121 | 2_4:-62810011 | Msa0341330:CDS |
| GAGAGTACCGAATTGGAAAG+AGG | 0.538227 | 2_4:+62809834 | None:intergenic |
| ATTGGAACAGACCTACTAAC+GGG | 0.538244 | 2_4:+62803763 | None:intergenic |
| GTGCCTCCCATATCTGAGCT+TGG | 0.543407 | 2_4:-62807381 | Msa0341330:CDS |
| TTGTTGCAGCTCGTCGGAAG+GGG | 0.544764 | 2_4:-62809894 | Msa0341330:CDS |
| GCGGTGGAAGAGAACTGTAT+CGG | 0.546118 | 2_4:-62810012 | Msa0341330:CDS |
| ACGATTGATTTCATCACCGC+AGG | 0.546236 | 2_4:-62804564 | Msa0341330:CDS |
| GTCGATGACTTTGTCATCAT+CGG | 0.552732 | 2_4:+62809963 | None:intergenic |
| GATTGTTGCAGCTCGTCGGA+AGG | 0.555315 | 2_4:-62809896 | Msa0341330:CDS |
| GTAAACTCGTCAAGTGTCAT+GGG | 0.556504 | 2_4:+62807339 | None:intergenic |
| GTGACGACGGAGCACAATGC+CGG | 0.559922 | 2_4:-62810064 | Msa0341330:exon |
| AGAGGCGGCGAGAAGAGCGG+TGG | 0.561155 | 2_4:-62810028 | Msa0341330:CDS |
| GTCACAATACATCTTTGAGC+AGG | 0.563180 | 2_4:+62807479 | None:intergenic |
| GTCGGAAGGGGAAGAATATG+TGG | 0.563477 | 2_4:-62809882 | Msa0341330:CDS |
| CCAGAGTTGCAAAAGCTAAG+TGG | 0.563520 | 2_4:-62804435 | Msa0341330:CDS |
| GATATGGGAGGCACTGATGT+TGG | 0.563853 | 2_4:+62807390 | None:intergenic |
| GAATGAAATATCCAATTAGT+GGG | 0.570260 | 2_4:+62805372 | None:intergenic |
| AAGAAACTGGCAAGCCCAGA+GGG | 0.571679 | 2_4:-62804398 | Msa0341330:CDS |
| TGAAAAGAAGAAACCAGGCT+CGG | 0.576111 | 2_4:-62804181 | Msa0341330:CDS |
| CGGAAAAGCAGTTGAAGTTG+GGG | 0.576333 | 2_4:-62805412 | Msa0341330:CDS |
| GAAAGTGACGATGACAATGA+TGG | 0.576383 | 2_4:-62804240 | Msa0341330:CDS |
| GTGCTCCGTCGTCACTGTGA+TGG | 0.579220 | 2_4:+62810072 | None:intergenic |
| AGAGTACCGAATTGGAAAGA+GGG | 0.583270 | 2_4:+62809835 | None:intergenic |
| ATCAAAGTAGTAGAAGTACT+AGG | 0.585884 | 2_4:-62804101 | Msa0341330:CDS |
| ATTGTTGCAGCTCGTCGGAA+GGG | 0.588802 | 2_4:-62809895 | Msa0341330:CDS |
| TTTCATCACCGCAGGTGGCA+GGG | 0.589885 | 2_4:-62804556 | Msa0341330:intron |
| AGACGATTGTTGCAGCTCGT+CGG | 0.595174 | 2_4:-62809900 | Msa0341330:CDS |
| TCCAGGCAAGGATTCATCCA+CGG | 0.599987 | 2_4:-62805736 | Msa0341330:intron |
| GCAGAGTAGGAACACAGCCA+TGG | 0.602255 | 2_4:+62804034 | None:intergenic |
| CAAGTTGAAAAGAAGAAACC+AGG | 0.602633 | 2_4:-62804186 | Msa0341330:CDS |
| ATTGATTTCATCACCGCAGG+TGG | 0.604046 | 2_4:-62804561 | Msa0341330:CDS |
| ATGGCATACCCTGCCACCTG+CGG | 0.606176 | 2_4:+62804548 | None:intergenic |
| CTCTGCTCTAGAACAACAGA+AGG | 0.606847 | 2_4:-62804017 | Msa0341330:three_prime_UTR |
| CCGAATTGGAAAGAGGGAAA+CGG | 0.607478 | 2_4:+62809841 | None:intergenic |
| GGTAGAGGCGGCGAGAAGAG+CGG | 0.609449 | 2_4:-62810031 | Msa0341330:CDS |
| GATGACAATGATGGTAATGC+TGG | 0.610741 | 2_4:-62804231 | Msa0341330:CDS |
| AGGCTAGAAGCTATCTGCCG+TGG | 0.612330 | 2_4:+62805719 | None:intergenic |
| GCTCTAGAACAACAGAAGGA+TGG | 0.619271 | 2_4:-62804013 | Msa0341330:three_prime_UTR |
| CAAATCAAAGAAGGGGACGA+AGG | 0.629764 | 2_4:-62804307 | Msa0341330:CDS |
| GCTGGTGCTGTATACATCAA+GGG | 0.640257 | 2_4:-62809728 | Msa0341330:CDS |
| AAAAGAAGAAACCAGGCTCG+GGG | 0.641315 | 2_4:-62804179 | Msa0341330:CDS |
| GTAGATGATGATAACAATGA+CGG | 0.642794 | 2_4:-62804354 | Msa0341330:CDS |
| GGAGCTACCGGAGGTAGAGG+CGG | 0.644715 | 2_4:-62810043 | Msa0341330:CDS |
| ACTAATAGGAAACAGACTAA+GGG | 0.645351 | 2_4:-62804156 | Msa0341330:CDS |
| ACATTGCTGCAGCTAGACGA+TGG | 0.648396 | 2_4:-62807547 | Msa0341330:intron |
| CAGGTCTGCTGTAAATGACG+AGG | 0.648999 | 2_4:-62809031 | Msa0341330:CDS |
| AAAGTCTCAAATCAAAGAAG+GGG | 0.649563 | 2_4:-62804314 | Msa0341330:CDS |
| CACAATGCCGGAGCTACCGG+AGG | 0.654051 | 2_4:-62810052 | Msa0341330:exon |
| AACAATCGTCTTCCCAACAA+CGG | 0.658793 | 2_4:+62809912 | None:intergenic |
| GATTGGAACAGACCTACTAA+CGG | 0.659081 | 2_4:+62803762 | None:intergenic |
| AAATTCCATCACAGTGACGA+CGG | 0.665991 | 2_4:-62810077 | Msa0341330:five_prime_UTR |
| AAAGAAACTGGCAAGCCCAG+AGG | 0.666706 | 2_4:-62804399 | Msa0341330:CDS |
| GATGATGACAAAGTCATCGA+CGG | 0.687773 | 2_4:-62809961 | Msa0341330:CDS |
| AATTGGAAAGAGGGAAACGG+AGG | 0.705743 | 2_4:+62809844 | None:intergenic |
| GGTCCAAGCTCAGATATGGG+AGG | 0.706462 | 2_4:+62807378 | None:intergenic |
| TAAGAACAGAGAATAAACGC+GGG | 0.709856 | 2_4:-62810101 | Msa0341330:five_prime_UTR |
| GTAAGAACAGAGAATAAACG+CGG | 0.721193 | 2_4:-62810102 | Msa0341330:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTAATTATTTATTATT+AGG | - | chr2_4:62807992-62808011 | Msa0341330:intron | 0.0% |
| !! | TTATTTATTATTAGGAATTA+AGG | - | chr2_4:62808000-62808019 | Msa0341330:intron | 10.0% |
| !!! | ATATTTTCATTTGTTATTAT+TGG | + | chr2_4:62809287-62809306 | None:intergenic | 10.0% |
| !! | AATAAAAAACTTTGAATACT+TGG | + | chr2_4:62804930-62804949 | None:intergenic | 15.0% |
| !!! | TTTTAACATTATTGAGAAAA+TGG | - | chr2_4:62805329-62805348 | Msa0341330:intron | 15.0% |
| !! | TTTAACATTATTGAGAAAAT+GGG | - | chr2_4:62805330-62805349 | Msa0341330:intron | 15.0% |
| !! | AGACAGAAAATAAAATATTT+GGG | + | chr2_4:62806688-62806707 | None:intergenic | 15.0% |
| !! | AAGACAGAAAATAAAATATT+TGG | + | chr2_4:62806689-62806708 | None:intergenic | 15.0% |
| !!! | TTTTTAGCAATTTAACTATA+TGG | - | chr2_4:62807094-62807113 | Msa0341330:intron | 15.0% |
| !! | TTTCAATTCTATATCAAAAA+AGG | + | chr2_4:62807654-62807673 | None:intergenic | 15.0% |
| !!! | TTTTGATATAGAATTGAAAT+CGG | - | chr2_4:62807655-62807674 | Msa0341330:intron | 15.0% |
| !!! | CTAGATTTTTATAATTCAAT+TGG | - | chr2_4:62807719-62807738 | Msa0341330:intron | 15.0% |
| !! | CTGTAAAATAAATTTATTTG+TGG | + | chr2_4:62808486-62808505 | None:intergenic | 15.0% |
| !!! | CACAAATAAATTTATTTTAC+AGG | - | chr2_4:62808484-62808503 | Msa0341330:intron | 15.0% |
| !!! | TTTATTTTTAACTCAAAGTA+GGG | + | chr2_4:62808620-62808639 | None:intergenic | 15.0% |
| !!! | TTTTATTTTTAACTCAAAGT+AGG | + | chr2_4:62808621-62808640 | None:intergenic | 15.0% |
| !!! | ATCAATTTACTACAATTTTA+GGG | + | chr2_4:62808729-62808748 | None:intergenic | 15.0% |
| !!! | AATCAATTTACTACAATTTT+AGG | + | chr2_4:62808730-62808749 | None:intergenic | 15.0% |
| !! | TCTATAATTAATCAATTTCT+TGG | - | chr2_4:62809194-62809213 | Msa0341330:intron | 15.0% |
| !! | AAATTATAAATGTTTGGATT+TGG | + | chr2_4:62809320-62809339 | None:intergenic | 15.0% |
| !! | ACATGAAAATTATAAATGTT+TGG | + | chr2_4:62809326-62809345 | None:intergenic | 15.0% |
| !! | TAGAAATAAATAAAAGATGA+TGG | + | chr2_4:62809429-62809448 | None:intergenic | 15.0% |
| !! | AATTGAACATAATTCACATT+TGG | + | chr2_4:62804328-62804347 | None:intergenic | 20.0% |
| !!! | ATTTACATTTTCATACTACA+CGG | + | chr2_4:62804570-62804589 | None:intergenic | 20.0% |
| !! | TGTAAATTTAAATACGCAAA+TGG | - | chr2_4:62804583-62804602 | Msa0341330:intron | 20.0% |
| !!! | TAACTTTAAGTGTTTTCATT+AGG | - | chr2_4:62804703-62804722 | Msa0341330:intron | 20.0% |
| !!! | AACTTTAAGTGTTTTCATTA+GGG | - | chr2_4:62804704-62804723 | Msa0341330:intron | 20.0% |
| !!! | GTATTCAAAGTTTTTTATTC+AGG | - | chr2_4:62804931-62804950 | Msa0341330:intron | 20.0% |
| !! | TCAAATAAAAAACATAGCAT+CGG | + | chr2_4:62805036-62805055 | None:intergenic | 20.0% |
| !! | TTAACATTATTGAGAAAATG+GGG | - | chr2_4:62805331-62805350 | Msa0341330:intron | 20.0% |
| !!! | TATTTTAACAATATCTCCAA+CGG | + | chr2_4:62806031-62806050 | None:intergenic | 20.0% |
| !! | AAATCTAATGACTTCAAATT+TGG | + | chr2_4:62806118-62806137 | None:intergenic | 20.0% |
| !! | ATTATGCTTTATGTATGAAA+TGG | + | chr2_4:62806202-62806221 | None:intergenic | 20.0% |
| !! | TTTCATACATAAAGCATAAT+CGG | - | chr2_4:62806202-62806221 | Msa0341330:intron | 20.0% |
| !! | ATATCAAACTCTTATTAGTA+TGG | + | chr2_4:62806489-62806508 | None:intergenic | 20.0% |
| !! | AAAATACATGGAAAATATCA+AGG | + | chr2_4:62807000-62807019 | None:intergenic | 20.0% |
| !!! | TTTTAATTCTCATCTAAACT+TGG | - | chr2_4:62807069-62807088 | Msa0341330:intron | 20.0% |
| !! | TTAACTATATGGTGATATAA+TGG | - | chr2_4:62807105-62807124 | Msa0341330:intron | 20.0% |
| !! | ATAGACTAATATCATATACT+TGG | - | chr2_4:62807185-62807204 | Msa0341330:intron | 20.0% |
| !! | TAAAAGAAAAGAAACCAATA+TGG | + | chr2_4:62807256-62807275 | None:intergenic | 20.0% |
| !! | TTTGTTCAGAAGAAATATAT+TGG | - | chr2_4:62807379-62807398 | Msa0341330:CDS | 20.0% |
| !! | AATGGCATACATATAATAAA+AGG | - | chr2_4:62807470-62807489 | Msa0341330:intron | 20.0% |
| !! | ATGGCATACATATAATAAAA+GGG | - | chr2_4:62807471-62807490 | Msa0341330:intron | 20.0% |
| !! | TGTGTTCTTAACTTATTATT+TGG | - | chr2_4:62807612-62807631 | Msa0341330:intron | 20.0% |
| !! | GTGTTCTTAACTTATTATTT+GGG | - | chr2_4:62807613-62807632 | Msa0341330:intron | 20.0% |
| !! | AATGTGGAATATATTGTATT+GGG | + | chr2_4:62807859-62807878 | None:intergenic | 20.0% |
| !! | AAATGTGGAATATATTGTAT+TGG | + | chr2_4:62807860-62807879 | None:intergenic | 20.0% |
| !! | AGATTAAGAATGTATAAATG+TGG | + | chr2_4:62807875-62807894 | None:intergenic | 20.0% |
| !! | ATTCTTAATCTCAGATAAAT+TGG | - | chr2_4:62807884-62807903 | Msa0341330:intron | 20.0% |
| !! | TTCTTAATCTCAGATAAATT+GGG | - | chr2_4:62807885-62807904 | Msa0341330:intron | 20.0% |
| !! | TTTATTATTAGGAATTAAGG+AGG | - | chr2_4:62808003-62808022 | Msa0341330:intron | 20.0% |
| !! | AGAACAATAAGCAATTTAAA+GGG | + | chr2_4:62808288-62808307 | None:intergenic | 20.0% |
| !!! | AAATTTATTTTACAGGTTGT+CGG | - | chr2_4:62808491-62808510 | Msa0341330:intron | 20.0% |
| !!! | TAACGAAGTTTTAATATTTG+TGG | - | chr2_4:62808900-62808919 | Msa0341330:intron | 20.0% |
| !!! | ATAGACCAAAGATATTTTTT+AGG | + | chr2_4:62810065-62810084 | None:intergenic | 20.0% |
| ! | TTGCTGTAACAAAGTATAAA+AGG | - | chr2_4:62804220-62804239 | Msa0341330:CDS | 25.0% |
| ! | GAAACATGATATTGTAAAAC+TGG | + | chr2_4:62804519-62804538 | None:intergenic | 25.0% |
| !!! | CTTTTTTGTCAAGATTTTGT+TGG | - | chr2_4:62804538-62804557 | Msa0341330:intron | 25.0% |
| ! | GTAAATATAAACTTCTTCAC+AGG | - | chr2_4:62804873-62804892 | Msa0341330:intron | 25.0% |
| ! | AAAAACTTTGAATACTTGGA+AGG | + | chr2_4:62804926-62804945 | None:intergenic | 25.0% |
| ! | TAATATATAGTAGTCACAGA+TGG | + | chr2_4:62805167-62805186 | None:intergenic | 25.0% |
| !! | TACTTTTCTTGTCAATTACA+AGG | - | chr2_4:62805239-62805258 | Msa0341330:intron | 25.0% |
| !!! | GTTTTGGAAAATATTCATGT+TGG | + | chr2_4:62805293-62805312 | None:intergenic | 25.0% |
| !! | AACTTGAACATTCAAAGTTT+TGG | + | chr2_4:62805309-62805328 | None:intergenic | 25.0% |
| ! | TAAATAAAGGTTAGATGTCA+TGG | + | chr2_4:62805427-62805446 | None:intergenic | 25.0% |
| ! | TCTTCACTTTAACATGTATA+CGG | - | chr2_4:62805684-62805703 | Msa0341330:CDS | 25.0% |
| !!! | TTTTTGCTGTAAAATAGCTA+TGG | - | chr2_4:62805782-62805801 | Msa0341330:intron | 25.0% |
| !!! | AGTTTGTTGGATATTCTTTT+GGG | - | chr2_4:62805866-62805885 | Msa0341330:intron | 25.0% |
| !!! | ATTTTAACAATATCTCCAAC+GGG | + | chr2_4:62806030-62806049 | None:intergenic | 25.0% |
| ! | GATAAAAAAAGTCAAATGTG+AGG | + | chr2_4:62806176-62806195 | None:intergenic | 25.0% |
| ! | ACAGAAATCAGAAATGTAAA+GGG | + | chr2_4:62806815-62806834 | None:intergenic | 25.0% |
| !! | TCAAGGATTTAAAATCATTG+AGG | + | chr2_4:62806983-62807002 | None:intergenic | 25.0% |
| !! | TCCATGTATTTTGTTAACTA+TGG | - | chr2_4:62807008-62807027 | Msa0341330:CDS | 25.0% |
| ! | TCCATAGTTAACAAAATACA+TGG | + | chr2_4:62807012-62807031 | None:intergenic | 25.0% |
| ! | AAGTATCTATTTGTTCAATC+TGG | + | chr2_4:62807288-62807307 | None:intergenic | 25.0% |
| ! | TGGCATACATATAATAAAAG+GGG | - | chr2_4:62807472-62807491 | Msa0341330:intron | 25.0% |
| ! | CAATTCTATATCAAAAAAGG+TGG | + | chr2_4:62807651-62807670 | None:intergenic | 25.0% |
| ! | ATTCAATTGGTCAAACAATT+AGG | - | chr2_4:62807732-62807751 | Msa0341330:intron | 25.0% |
| ! | AATGATAGTTTATTAGTCAC+TGG | + | chr2_4:62808099-62808118 | None:intergenic | 25.0% |
| ! | ATAAACTATCATTCTAGCAT+TGG | - | chr2_4:62808106-62808125 | Msa0341330:intron | 25.0% |
| ! | ATACAATAAGTTATAAGGCA+TGG | + | chr2_4:62808157-62808176 | None:intergenic | 25.0% |
| ! | GGGAAATACAATAAGTTATA+AGG | + | chr2_4:62808162-62808181 | None:intergenic | 25.0% |
| ! | TCTATATAAGTGCATTAAAG+AGG | - | chr2_4:62808248-62808267 | Msa0341330:intron | 25.0% |
| ! | CAGAACAATAAGCAATTTAA+AGG | + | chr2_4:62808289-62808308 | None:intergenic | 25.0% |
| ! | CTTTAAATTGCTTATTGTTC+TGG | - | chr2_4:62808287-62808306 | Msa0341330:intron | 25.0% |
| !!! | TTTAGCCTCTATACTTTTTA+TGG | + | chr2_4:62808325-62808344 | None:intergenic | 25.0% |
| ! | AAAATGAAATAACCACTCAA+GGG | + | chr2_4:62808402-62808421 | None:intergenic | 25.0% |
| ! | GAATGAAATATCCAATTAGT+GGG | + | chr2_4:62808554-62808573 | None:intergenic | 25.0% |
| ! | CAATCAAGAATACAAGTTTA+GGG | + | chr2_4:62808799-62808818 | None:intergenic | 25.0% |
| ! | TTGGTGTGATTTACTATTAT+TGG | - | chr2_4:62808816-62808835 | Msa0341330:intron | 25.0% |
| !!! | TTATACCTTGATTGTTTTGA+AGG | - | chr2_4:62808947-62808966 | Msa0341330:intron | 25.0% |
| ! | TAATACCTTCAAAACAATCA+AGG | + | chr2_4:62808955-62808974 | None:intergenic | 25.0% |
| ! | GTGTGTTTCATATAATATGT+AGG | + | chr2_4:62809250-62809269 | None:intergenic | 25.0% |
| !! | TATAATTTTCATGTGATTGC+AGG | - | chr2_4:62809332-62809351 | Msa0341330:intron | 25.0% |
| !! | ATAATTTTCATGTGATTGCA+GGG | - | chr2_4:62809333-62809352 | Msa0341330:intron | 25.0% |
| !! | TTTTGAACAGGATAATTTTC+AGG | - | chr2_4:62810039-62810058 | Msa0341330:CDS | 25.0% |
| GTTATACATTCATTCAGCAT+GGG | + | chr2_4:62803779-62803798 | None:intergenic | 30.0% | |
| TGTTATACATTCATTCAGCA+TGG | + | chr2_4:62803780-62803799 | None:intergenic | 30.0% | |
| AGTTACAAGCATAAATCGTA+AGG | + | chr2_4:62804163-62804182 | None:intergenic | 30.0% | |
| TTTATGCTTGTAACTGTGTT+AGG | - | chr2_4:62804168-62804187 | Msa0341330:CDS | 30.0% | |
| GTAACAAAGTATAAAAGGTG+AGG | - | chr2_4:62804225-62804244 | Msa0341330:CDS | 30.0% | |
| CATAACTTTACATCTGAGTT+TGG | + | chr2_4:62804657-62804676 | None:intergenic | 30.0% | |
| CAAACTCAGATGTAAAGTTA+TGG | - | chr2_4:62804655-62804674 | Msa0341330:intron | 30.0% | |
| TTATATTTCCTTCTGTGTAG+TGG | - | chr2_4:62804734-62804753 | Msa0341330:intron | 30.0% | |
| TATATTTCCTTCTGTGTAGT+GGG | - | chr2_4:62804735-62804754 | Msa0341330:intron | 30.0% | |
| ACAGATATTGTCCAAAATGT+AGG | - | chr2_4:62805264-62805283 | Msa0341330:intron | 30.0% | |
| ATTCACTAAAAGCTCTTTAG+AGG | - | chr2_4:62805389-62805408 | Msa0341330:CDS | 30.0% | |
| ! | ACCTTTATTTATAGTACACC+AGG | - | chr2_4:62805436-62805455 | Msa0341330:intron | 30.0% |
| TCCTGGTGTACTATAAATAA+AGG | + | chr2_4:62805440-62805459 | None:intergenic | 30.0% | |
| ! | TAGAAGGTATAGAACAAACT+AGG | - | chr2_4:62805494-62805513 | Msa0341330:intron | 30.0% |
| AAACTAGGTTATTAACCTGT+TGG | - | chr2_4:62805509-62805528 | Msa0341330:intron | 30.0% | |
| !! | TTGATCTTCAAGGTATTGTA+TGG | + | chr2_4:62805611-62805630 | None:intergenic | 30.0% |
| ATTCGTCTATTTGATCTTCA+AGG | + | chr2_4:62805621-62805640 | None:intergenic | 30.0% | |
| ! | TTTTTGTTAGAGTTGACGAA+TGG | - | chr2_4:62805658-62805677 | Msa0341330:intron | 30.0% |
| CTTCACTTTAACATGTATAC+GGG | - | chr2_4:62805685-62805704 | Msa0341330:CDS | 30.0% | |
| ! | TATATTTCTGTGAAGCAGAA+GGG | - | chr2_4:62805722-62805741 | Msa0341330:CDS | 30.0% |
| GTAAGATTCTGATTACATTC+AGG | - | chr2_4:62805746-62805765 | Msa0341330:intron | 30.0% | |
| !! | TACATTCAGGTTGTAAGTTT+AGG | - | chr2_4:62805759-62805778 | Msa0341330:intron | 30.0% |
| CAAAAGAATATCCAACAAAC+TGG | + | chr2_4:62805867-62805886 | None:intergenic | 30.0% | |
| !!! | CAGTTTGTTGGATATTCTTT+TGG | - | chr2_4:62805865-62805884 | Msa0341330:intron | 30.0% |
| !! | GTTTGTTGGATATTCTTTTG+GGG | - | chr2_4:62805867-62805886 | Msa0341330:intron | 30.0% |
| TACTTTCATGTTACATACTG+TGG | - | chr2_4:62805942-62805961 | Msa0341330:intron | 30.0% | |
| AATATTCCCCTTATAAGACT+TGG | - | chr2_4:62806047-62806066 | Msa0341330:intron | 30.0% | |
| ATGTATAAAGTTCAAACTGC+AGG | + | chr2_4:62806149-62806168 | None:intergenic | 30.0% | |
| CAAGAAGAAAACTGAAATCA+AGG | - | chr2_4:62806619-62806638 | Msa0341330:intron | 30.0% | |
| CACAGAAATCAGAAATGTAA+AGG | + | chr2_4:62806816-62806835 | None:intergenic | 30.0% | |
| !! | ATATTTCAGGCATTGGAAAT+TGG | - | chr2_4:62806914-62806933 | Msa0341330:intron | 30.0% |
| !! | TATTTCAGGCATTGGAAATT+GGG | - | chr2_4:62806915-62806934 | Msa0341330:intron | 30.0% |
| TATGGTGATATAATGGCTAA+TGG | - | chr2_4:62807112-62807131 | Msa0341330:intron | 30.0% | |
| ! | TTTTATCTAGTCCTCCATAT+TGG | - | chr2_4:62807239-62807258 | Msa0341330:intron | 30.0% |
| AAGAAAAGAAACCAATATGG+AGG | + | chr2_4:62807253-62807272 | None:intergenic | 30.0% | |
| !!! | ATTTATTTTGTGTCTGTGTG+TGG | - | chr2_4:62807445-62807464 | Msa0341330:intron | 30.0% |
| !!! | TTTATTTTGTGTCTGTGTGT+GGG | - | chr2_4:62807446-62807465 | Msa0341330:intron | 30.0% |
| AAGAAGAAACGTGAACAATT+TGG | + | chr2_4:62807508-62807527 | None:intergenic | 30.0% | |
| ! | CTTTAAGAGATTTGATCGTT+AGG | - | chr2_4:62807525-62807544 | Msa0341330:CDS | 30.0% |
| TAATAGTTGCTAACAGCTTA+TGG | + | chr2_4:62807692-62807711 | None:intergenic | 30.0% | |
| ! | GTTTTATCATGAATCTTGTC+CGG | + | chr2_4:62807785-62807804 | None:intergenic | 30.0% |
| ATGACATTGTTTGATTCATG+AGG | - | chr2_4:62807913-62807932 | Msa0341330:intron | 30.0% | |
| !! | TTTTGGAAATAGCATTTCAC+TGG | - | chr2_4:62808040-62808059 | Msa0341330:intron | 30.0% |
| ! | ATTGTATTTCCCTTATTTCC+AGG | - | chr2_4:62808170-62808189 | Msa0341330:intron | 30.0% |
| TATAAGTGCATTAAAGAGGT+AGG | - | chr2_4:62808252-62808271 | Msa0341330:intron | 30.0% | |
| ATAAGTGCATTAAAGAGGTA+GGG | - | chr2_4:62808253-62808272 | Msa0341330:intron | 30.0% | |
| ! | AGACTCCATAAAAAGTATAG+AGG | - | chr2_4:62808317-62808336 | Msa0341330:intron | 30.0% |
| AAATGAAATAACCACTCAAG+GGG | + | chr2_4:62808401-62808420 | None:intergenic | 30.0% | |
| GAAAATGAAATAACCACTCA+AGG | + | chr2_4:62808403-62808422 | None:intergenic | 30.0% | |
| !! | AGTGGTTATTTCATTTTCGA+TGG | - | chr2_4:62808405-62808424 | Msa0341330:intron | 30.0% |
| !! | GTGGTTATTTCATTTTCGAT+GGG | - | chr2_4:62808406-62808425 | Msa0341330:intron | 30.0% |
| !! | TGGTTATTTCATTTTCGATG+GGG | - | chr2_4:62808407-62808426 | Msa0341330:intron | 30.0% |
| AAAAAGCCTGGAAAAATAAG+TGG | - | chr2_4:62808431-62808450 | Msa0341330:intron | 30.0% | |
| GGAATGAAATATCCAATTAG+TGG | + | chr2_4:62808555-62808574 | None:intergenic | 30.0% | |
| AGCTCAATACCATAGTAAAA+GGG | + | chr2_4:62808678-62808697 | None:intergenic | 30.0% | |
| CCAATCAAGAATACAAGTTT+AGG | + | chr2_4:62808800-62808819 | None:intergenic | 30.0% | |
| CCTAAACTTGTATTCTTGAT+TGG | - | chr2_4:62808797-62808816 | Msa0341330:intron | 30.0% | |
| ATCATTCCCCAATAATATGA+AGG | + | chr2_4:62808872-62808891 | None:intergenic | 30.0% | |
| !! | TTTGAAAGCATTGTGAAGAT+TGG | + | chr2_4:62809088-62809107 | None:intergenic | 30.0% |
| ATCTTCACAATGCTTTCAAA+AGG | - | chr2_4:62809088-62809107 | Msa0341330:intron | 30.0% | |
| TCTTCACAATGCTTTCAAAA+GGG | - | chr2_4:62809089-62809108 | Msa0341330:intron | 30.0% | |
| TATTGATCCTATAACACATC+TGG | + | chr2_4:62809153-62809172 | None:intergenic | 30.0% | |
| AATAAGAGCAATGTTCAGAA+TGG | + | chr2_4:62809397-62809416 | None:intergenic | 30.0% | |
| TCACAAGTGTTAAAAGAAAC+TGG | - | chr2_4:62809512-62809531 | Msa0341330:intron | 30.0% | |
| !! | ATCTACACTTGTTTTCTTTG+AGG | + | chr2_4:62809555-62809574 | None:intergenic | 30.0% |
| GTAGATGATGATAACAATGA+CGG | - | chr2_4:62809569-62809588 | Msa0341330:intron | 30.0% | |
| GAAAGTCTCAAATCAAAGAA+GGG | - | chr2_4:62809608-62809627 | Msa0341330:intron | 30.0% | |
| AAAGTCTCAAATCAAAGAAG+GGG | - | chr2_4:62809609-62809628 | Msa0341330:intron | 30.0% | |
| !!! | TCGGTCTTTTTTCTTTTTGA+AGG | + | chr2_4:62809662-62809681 | None:intergenic | 30.0% |
| TTCAAAAAGAAAAAAGACCG+AGG | - | chr2_4:62809661-62809680 | Msa0341330:intron | 30.0% | |
| ACTAATAGGAAACAGACTAA+GGG | - | chr2_4:62809767-62809786 | Msa0341330:intron | 30.0% | |
| !! | ATCAAAGTAGTAGAAGTACT+AGG | - | chr2_4:62809822-62809841 | Msa0341330:intron | 30.0% |
| ! | TAAAGCTAAGTAGCAACTTT+TGG | - | chr2_4:62809847-62809866 | Msa0341330:CDS | 30.0% |
| ! | AAAGCTAAGTAGCAACTTTT+GGG | - | chr2_4:62809848-62809867 | Msa0341330:CDS | 30.0% |
| !!! | TTGGGCTTAGAATTGTTTTT+TGG | - | chr2_4:62809866-62809885 | Msa0341330:CDS | 30.0% |
| !!! | TTAGAATTGTTTTTTGGCCA+TGG | - | chr2_4:62809872-62809891 | Msa0341330:CDS | 30.0% |
| !!! | GTTTTGGTTTTATGATCTGT+TGG | - | chr2_4:62809970-62809989 | Msa0341330:CDS | 30.0% |
| ! | AATGTTAACGTCTTTTGAAC+AGG | - | chr2_4:62810027-62810046 | Msa0341330:CDS | 30.0% |
| TCAGGCCTAAAAAATATCTT+TGG | - | chr2_4:62810057-62810076 | Msa0341330:exon | 30.0% | |
| ATTCAGCATGGGTTTAAATC+GGG | + | chr2_4:62803768-62803787 | None:intergenic | 35.0% | |
| CATTCAGCATGGGTTTAAAT+CGG | + | chr2_4:62803769-62803788 | None:intergenic | 35.0% | |
| GTAAGAACAGAGAATAAACG+CGG | - | chr2_4:62803821-62803840 | Msa0341330:three_prime_UTR | 35.0% | |
| TAAGAACAGAGAATAAACGC+GGG | - | chr2_4:62803822-62803841 | Msa0341330:three_prime_UTR | 35.0% | |
| TCGTAAGGATTATGAAGCTA+AGG | + | chr2_4:62804148-62804167 | None:intergenic | 35.0% | |
| TAACCACTGAGAGAACTTAT+AGG | + | chr2_4:62804851-62804870 | None:intergenic | 35.0% | |
| AACTTTACCACTTGTGTCTT+TGG | - | chr2_4:62804991-62805010 | Msa0341330:intron | 35.0% | |
| ACTTTACCACTTGTGTCTTT+GGG | - | chr2_4:62804992-62805011 | Msa0341330:intron | 35.0% | |
| TGAATGATGACAAACTGAAG+TGG | - | chr2_4:62805056-62805075 | Msa0341330:intron | 35.0% | |
| TACATCCATACGTGATTTCA+TGG | - | chr2_4:62805203-62805222 | Msa0341330:intron | 35.0% | |
| GTTTATATCCCTTGCTTAGA+AGG | - | chr2_4:62805478-62805497 | Msa0341330:intron | 35.0% | |
| GTTCTATACCTTCTAAGCAA+GGG | + | chr2_4:62805489-62805508 | None:intergenic | 35.0% | |
| TGTTCTATACCTTCTAAGCA+AGG | + | chr2_4:62805490-62805509 | None:intergenic | 35.0% | |
| ! | CTATATTTCTGTGAAGCAGA+AGG | - | chr2_4:62805721-62805740 | Msa0341330:CDS | 35.0% |
| ! | CATTCTTGTTTCCAGTTTGT+TGG | - | chr2_4:62805853-62805872 | Msa0341330:intron | 35.0% |
| TGCAGCAATGTGATTTAATC+TGG | + | chr2_4:62806367-62806386 | None:intergenic | 35.0% | |
| TGGATGACAATTTGCAAGTA+GGG | + | chr2_4:62806469-62806488 | None:intergenic | 35.0% | |
| ATGGATGACAATTTGCAAGT+AGG | + | chr2_4:62806470-62806489 | None:intergenic | 35.0% | |
| AAATGAAAGATCCGCTTACT+TGG | + | chr2_4:62806960-62806979 | None:intergenic | 35.0% | |
| ATATTGCATCAGCAAGATGA+TGG | - | chr2_4:62807216-62807235 | Msa0341330:intron | 35.0% | |
| CTATTTGTTCAATCTGGTCA+AGG | + | chr2_4:62807282-62807301 | None:intergenic | 35.0% | |
| ! | TGAATGGTCTGAAATCTAGT+TGG | - | chr2_4:62807327-62807346 | Msa0341330:CDS | 35.0% |
| !! | TTAACGGGAAAGGTTTTTAG+AGG | - | chr2_4:62807946-62807965 | Msa0341330:intron | 35.0% |
| TTATTAGGAATTAAGGAGGC+AGG | - | chr2_4:62808007-62808026 | Msa0341330:intron | 35.0% | |
| CCTGTAGGTTATTCAATTTG+CGG | - | chr2_4:62808346-62808365 | Msa0341330:intron | 35.0% | |
| !! | GGTTATTTCATTTTCGATGG+GGG | - | chr2_4:62808408-62808427 | Msa0341330:intron | 35.0% |
| GTAGTCAATATCCCACTAAT+TGG | - | chr2_4:62808540-62808559 | Msa0341330:intron | 35.0% | |
| ! | TGAATCGTACCCTTTTACTA+TGG | - | chr2_4:62808666-62808685 | Msa0341330:intron | 35.0% |
| CAGCTCAATACCATAGTAAA+AGG | + | chr2_4:62808679-62808698 | None:intergenic | 35.0% | |
| ! | CAGAGTGCCTTCATATTATT+GGG | - | chr2_4:62808862-62808881 | Msa0341330:intron | 35.0% |
| ! | AGAGTGCCTTCATATTATTG+GGG | - | chr2_4:62808863-62808882 | Msa0341330:intron | 35.0% |
| ! | GTATTCCAGTTTGAAACTCA+CGG | - | chr2_4:62808999-62809018 | Msa0341330:CDS | 35.0% |
| ! | TATTCCAGTTTGAAACTCAC+GGG | - | chr2_4:62809000-62809019 | Msa0341330:CDS | 35.0% |
| ATCTGTACCAGATGTGTTAT+AGG | - | chr2_4:62809143-62809162 | Msa0341330:intron | 35.0% | |
| GGAAAGTCTCAAATCAAAGA+AGG | - | chr2_4:62809607-62809626 | Msa0341330:intron | 35.0% | |
| ! | CAAGTTGAAAAGAAGAAACC+AGG | - | chr2_4:62809737-62809756 | Msa0341330:intron | 35.0% |
| GACTAATAGGAAACAGACTA+AGG | - | chr2_4:62809766-62809785 | Msa0341330:intron | 35.0% | |
| CAATCAAAGAAACGTGTTCA+AGG | - | chr2_4:62809797-62809816 | Msa0341330:intron | 35.0% | |
| !! | AGATTCGCATGATAACGTTT+TGG | - | chr2_4:62809954-62809973 | Msa0341330:CDS | 35.0% |
| !!! | TGGTTTTATGATCTGTTGGT+CGG | - | chr2_4:62809974-62809993 | Msa0341330:CDS | 35.0% |
| GGTCTATGTGATATTCTCAT+TGG | - | chr2_4:62810078-62810097 | Msa0341330:five_prime_UTR | 35.0% | |
| AAATTCCATCACAGTGACGA+CGG | - | chr2_4:62803846-62803865 | Msa0341330:three_prime_UTR | 40.0% | |
| GTCGATGACTTTGTCATCAT+CGG | + | chr2_4:62803963-62803982 | None:intergenic | 40.0% | |
| GATGATGACAAAGTCATCGA+CGG | - | chr2_4:62803962-62803981 | Msa0341330:three_prime_UTR | 40.0% | |
| AATTCGAAGCTTCCGTTGTT+GGG | - | chr2_4:62803999-62804018 | Msa0341330:three_prime_UTR | 40.0% | |
| AACAATCGTCTTCCCAACAA+CGG | + | chr2_4:62804014-62804033 | None:intergenic | 40.0% | |
| !! | AGAGTACCGAATTGGAAAGA+GGG | + | chr2_4:62804091-62804110 | None:intergenic | 40.0% |
| GCTTGTAACTGTGTTAGGTA+TGG | - | chr2_4:62804173-62804192 | Msa0341330:CDS | 40.0% | |
| AGTATAAAAGGTGAGGCCAA+TGG | - | chr2_4:62804232-62804251 | Msa0341330:CDS | 40.0% | |
| GTCCAATGTTTGACACTTGT+CGG | - | chr2_4:62804299-62804318 | Msa0341330:CDS | 40.0% | |
| !!! | TGATGTTTTAGTGTTGCGTC+TGG | - | chr2_4:62804380-62804399 | Msa0341330:CDS | 40.0% |
| GAGTATAACGTGTGAAGTAG+AGG | + | chr2_4:62804447-62804466 | None:intergenic | 40.0% | |
| CTCAGATGTAAAGTTATGGC+AGG | - | chr2_4:62804659-62804678 | Msa0341330:intron | 40.0% | |
| ! | GCTCATTGAGATTTGAGGTA+TGG | + | chr2_4:62804796-62804815 | None:intergenic | 40.0% |
| ACAGAGCTCATTGAGATTTG+AGG | + | chr2_4:62804801-62804820 | None:intergenic | 40.0% | |
| ACACCTATAAGTTCTCTCAG+TGG | - | chr2_4:62804845-62804864 | Msa0341330:intron | 40.0% | |
| CTGTAAATGACGAGGATGAA+TGG | - | chr2_4:62804900-62804919 | Msa0341330:intron | 40.0% | |
| CATAGCATTCTGCTCATCAA+AGG | + | chr2_4:62804971-62804990 | None:intergenic | 40.0% | |
| AGTAGCCTGTATGTTAGACT+TGG | - | chr2_4:62805133-62805152 | Msa0341330:intron | 40.0% | |
| GTAGCCTGTATGTTAGACTT+GGG | - | chr2_4:62805134-62805153 | Msa0341330:intron | 40.0% | |
| !! | CATGTTGGTGTCCTACATTT+TGG | + | chr2_4:62805278-62805297 | None:intergenic | 40.0% |
| !! | TGTTAGGTAGTAGAAGCACT+TGG | + | chr2_4:62805541-62805560 | None:intergenic | 40.0% |
| GCTTCTACTACCTAACACAT+TGG | - | chr2_4:62805544-62805563 | Msa0341330:intron | 40.0% | |
| GTTGAAGTTGCCAATGTGTT+AGG | + | chr2_4:62805557-62805576 | None:intergenic | 40.0% | |
| ACATTGGCAACTTCAACTGA+TGG | - | chr2_4:62805560-62805579 | Msa0341330:intron | 40.0% | |
| !! | TGTTGGATATTCTTTTGGGG+CGG | - | chr2_4:62805870-62805889 | Msa0341330:intron | 40.0% |
| ! | GATAGGCCAAGTCTTATAAG+GGG | + | chr2_4:62806056-62806075 | None:intergenic | 40.0% |
| ! | GGATAGGCCAAGTCTTATAA+GGG | + | chr2_4:62806057-62806076 | None:intergenic | 40.0% |
| ! | AGGATAGGCCAAGTCTTATA+AGG | + | chr2_4:62806058-62806077 | None:intergenic | 40.0% |
| ! | AAAAGTTGGCTCAAGGAATG+AGG | + | chr2_4:62806078-62806097 | None:intergenic | 40.0% |
| ! | TCATTCCTTGAGCCAACTTT+TGG | - | chr2_4:62806077-62806096 | Msa0341330:intron | 40.0% |
| ! | CATTCCTTGAGCCAACTTTT+GGG | - | chr2_4:62806078-62806097 | Msa0341330:intron | 40.0% |
| ! | ATTCCTTGAGCCAACTTTTG+GGG | - | chr2_4:62806079-62806098 | Msa0341330:intron | 40.0% |
| ! | AGCTGTCTTTTACCGACAAA+AGG | - | chr2_4:62806404-62806423 | Msa0341330:intron | 40.0% |
| ! | TCTAGCAAATCGCCTTTTGT+CGG | + | chr2_4:62806419-62806438 | None:intergenic | 40.0% |
| GTCACAATACATCTTTGAGC+AGG | + | chr2_4:62806447-62806466 | None:intergenic | 40.0% | |
| ! | ATGGGATCAAAAAGTGCATC+AGG | + | chr2_4:62806569-62806588 | None:intergenic | 40.0% |
| GTAAACTCGTCAAGTGTCAT+GGG | + | chr2_4:62806587-62806606 | None:intergenic | 40.0% | |
| AGTAAACTCGTCAAGTGTCA+TGG | + | chr2_4:62806588-62806607 | None:intergenic | 40.0% | |
| ! | AAATATAGCTCTGCAGAGGA+TGG | + | chr2_4:62806900-62806919 | None:intergenic | 40.0% |
| CAGAGCTATATTTCAGGCAT+TGG | - | chr2_4:62806907-62806926 | Msa0341330:intron | 40.0% | |
| AGATACTTGTTCACGTCATC+AGG | - | chr2_4:62807300-62807319 | Msa0341330:CDS | 40.0% | |
| ! | GGTCTGAAATCTAGTTGGAA+CGG | - | chr2_4:62807332-62807351 | Msa0341330:CDS | 40.0% |
| ! | GTCTGAAATCTAGTTGGAAC+GGG | - | chr2_4:62807333-62807352 | Msa0341330:CDS | 40.0% |
| AACGTGAACAATTTGGACAG+TGG | + | chr2_4:62807501-62807520 | None:intergenic | 40.0% | |
| ! | ATGAGGCCAATGCTACTTAA+CGG | - | chr2_4:62807930-62807949 | Msa0341330:intron | 40.0% |
| ! | AGGCAGGAGCTTCAAATTTT+TGG | - | chr2_4:62808023-62808042 | Msa0341330:intron | 40.0% |
| ACTGGATTTAGTATCTGCTC+TGG | - | chr2_4:62808058-62808077 | Msa0341330:intron | 40.0% | |
| CTGGATTTAGTATCTGCTCT+GGG | - | chr2_4:62808059-62808078 | Msa0341330:intron | 40.0% | |
| ! | ATTTCCCTTATTTCCAGGCA+AGG | - | chr2_4:62808175-62808194 | Msa0341330:intron | 40.0% |
| GAATCCTTGCCTGGAAATAA+GGG | + | chr2_4:62808182-62808201 | None:intergenic | 40.0% | |
| TGAATCCTTGCCTGGAAATA+AGG | + | chr2_4:62808183-62808202 | None:intergenic | 40.0% | |
| GTATAGAGGCTAAAACCTGT+AGG | - | chr2_4:62808331-62808350 | Msa0341330:intron | 40.0% | |
| CCGCAAATTGAATAACCTAC+AGG | + | chr2_4:62808349-62808368 | None:intergenic | 40.0% | |
| ATAACCACTCAAGGGGAAAA+CGG | + | chr2_4:62808394-62808413 | None:intergenic | 40.0% | |
| !! | TCCTCACCACTTATTTTTCC+AGG | + | chr2_4:62808440-62808459 | None:intergenic | 40.0% |
| TCGGAAAAGCAGTTGAAGTT+GGG | - | chr2_4:62808510-62808529 | Msa0341330:intron | 40.0% | |
| ACCATCAACAAAAGCTTTGC+CGG | + | chr2_4:62808591-62808610 | None:intergenic | 40.0% | |
| !! | CCAATAATATGAAGGCACTC+TGG | + | chr2_4:62808864-62808883 | None:intergenic | 40.0% |
| ! | CCAGAGTGCCTTCATATTAT+TGG | - | chr2_4:62808861-62808880 | Msa0341330:intron | 40.0% |
| TTCAAAAGGGTTTCCGAAAG+TGG | - | chr2_4:62809102-62809121 | Msa0341330:intron | 40.0% | |
| ! | ATGAGAACATCAGCCACTTT+CGG | + | chr2_4:62809118-62809137 | None:intergenic | 40.0% |
| ! | ATTGTCATCGTCACTTTCCT+CGG | + | chr2_4:62809681-62809700 | None:intergenic | 40.0% |
| GAAAGTGACGATGACAATGA+TGG | - | chr2_4:62809683-62809702 | Msa0341330:intron | 40.0% | |
| ! | GATGACAATGATGGTAATGC+TGG | - | chr2_4:62809692-62809711 | Msa0341330:intron | 40.0% |
| TGAAAAGAAGAAACCAGGCT+CGG | - | chr2_4:62809742-62809761 | Msa0341330:intron | 40.0% | |
| TGGTTTAGTGTATGCTTGCT+TGG | - | chr2_4:62810098-62810117 | Msa0341330:five_prime_UTR | 40.0% | |
| GGTTTAGTGTATGCTTGCTT+GGG | - | chr2_4:62810099-62810118 | Msa0341330:five_prime_UTR | 40.0% | |
| ATTGGAACAGACCTACTAAC+GGG | + | chr2_4:62810163-62810182 | None:intergenic | 40.0% | |
| GATTGGAACAGACCTACTAA+CGG | + | chr2_4:62810164-62810183 | None:intergenic | 40.0% | |
| GAATTCGAAGCTTCCGTTGT+TGG | - | chr2_4:62803998-62804017 | Msa0341330:three_prime_UTR | 45.0% | |
| AATTGGAAAGAGGGAAACGG+AGG | + | chr2_4:62804082-62804101 | None:intergenic | 45.0% | |
| CCGAATTGGAAAGAGGGAAA+CGG | + | chr2_4:62804085-62804104 | None:intergenic | 45.0% | |
| CCGTTTCCCTCTTTCCAATT+CGG | - | chr2_4:62804082-62804101 | Msa0341330:exon | 45.0% | |
| !! | GAGAGTACCGAATTGGAAAG+AGG | + | chr2_4:62804092-62804111 | None:intergenic | 45.0% |
| !! | AGAGAGAGAGAGTACCGAAT+TGG | + | chr2_4:62804099-62804118 | None:intergenic | 45.0% |
| GTAACTGTGTTAGGTATGGC+TGG | - | chr2_4:62804177-62804196 | Msa0341330:CDS | 45.0% | |
| !! | GCTGGTGCTGTATACATCAA+GGG | - | chr2_4:62804195-62804214 | Msa0341330:CDS | 45.0% |
| CAAGCGTAACGATACTCCAT+TGG | + | chr2_4:62804251-62804270 | None:intergenic | 45.0% | |
| CACCGACAAGTGTCAAACAT+TGG | + | chr2_4:62804304-62804323 | None:intergenic | 45.0% | |
| ! | ATTTCCTTCTGTGTAGTGGG+TGG | - | chr2_4:62804738-62804757 | Msa0341330:intron | 45.0% |
| TACAAGCCCAAAGACACAAG+TGG | + | chr2_4:62805001-62805020 | None:intergenic | 45.0% | |
| !! | CTGAAGTGGACTATTTGCTG+TGG | - | chr2_4:62805070-62805089 | Msa0341330:intron | 45.0% |
| CTAGCCCAAGTCTAACATAC+AGG | + | chr2_4:62805141-62805160 | None:intergenic | 45.0% | |
| TCGCACCATGAAATCACGTA+TGG | + | chr2_4:62805211-62805230 | None:intergenic | 45.0% | |
| ATGGGGAGAGTGAACATGTT+TGG | - | chr2_4:62805348-62805367 | Msa0341330:CDS | 45.0% | |
| ACATTGTGTGATCAGAGTCC+TGG | + | chr2_4:62805457-62805476 | None:intergenic | 45.0% | |
| AGCACTTGGCTTAATCCAAC+AGG | + | chr2_4:62805527-62805546 | None:intergenic | 45.0% | |
| CTATGGTGAAAGCTTGTGTC+AGG | - | chr2_4:62805799-62805818 | Msa0341330:intron | 45.0% | |
| ACAATATCTCCAACGGGTGT+GGG | + | chr2_4:62806024-62806043 | None:intergenic | 45.0% | |
| AACAATATCTCCAACGGGTG+TGG | + | chr2_4:62806025-62806044 | None:intergenic | 45.0% | |
| TTGGCTCAAGGAATGAGGAT+AGG | + | chr2_4:62806073-62806092 | None:intergenic | 45.0% | |
| GCTAACTCAACCCCAAAAGT+TGG | + | chr2_4:62806092-62806111 | None:intergenic | 45.0% | |
| AAGTTGTGCCTCTGTGCTTA+GGG | - | chr2_4:62806229-62806248 | Msa0341330:intron | 45.0% | |
| TCAGGTCCAAGCTCAGATAT+GGG | + | chr2_4:62806551-62806570 | None:intergenic | 45.0% | |
| ATCAGGTCCAAGCTCAGATA+TGG | + | chr2_4:62806552-62806571 | None:intergenic | 45.0% | |
| ! | CCTGAAATATAGCTCTGCAG+AGG | + | chr2_4:62806904-62806923 | None:intergenic | 45.0% |
| CCTCTGCAGAGCTATATTTC+AGG | - | chr2_4:62806901-62806920 | Msa0341330:intron | 45.0% | |
| !! | GAAGTGCTGTACCAAGTAAG+CGG | - | chr2_4:62806946-62806965 | Msa0341330:intron | 45.0% |
| CACGTCATCAGGATTGTGAA+TGG | - | chr2_4:62807311-62807330 | Msa0341330:CDS | 45.0% | |
| AGCATCATTGTTCCTCAGGA+AGG | + | chr2_4:62807557-62807576 | None:intergenic | 45.0% | |
| ! | ACAGAGCATCATTGTTCCTC+AGG | + | chr2_4:62807561-62807580 | None:intergenic | 45.0% |
| GGAATCAAATGGTCTGTCAC+CGG | - | chr2_4:62807763-62807782 | Msa0341330:intron | 45.0% | |
| ! | TGAGGCCAATGCTACTTAAC+GGG | - | chr2_4:62807931-62807950 | Msa0341330:intron | 45.0% |
| CCTTTCCCGTTAAGTAGCAT+TGG | + | chr2_4:62807939-62807958 | None:intergenic | 45.0% | |
| ! | CCAATGCTACTTAACGGGAA+AGG | - | chr2_4:62807936-62807955 | Msa0341330:intron | 45.0% |
| !! | ACGGGAAAGGTTTTTAGAGG+TGG | - | chr2_4:62807949-62807968 | Msa0341330:intron | 45.0% |
| !! | GGAAAGGTTTTTAGAGGTGG+TGG | - | chr2_4:62807952-62807971 | Msa0341330:intron | 45.0% |
| CATTAAAGAGGTAGGGATGC+TGG | - | chr2_4:62808260-62808279 | Msa0341330:intron | 45.0% | |
| GCCTGGAAAAATAAGTGGTG+AGG | - | chr2_4:62808436-62808455 | Msa0341330:intron | 45.0% | |
| GTCGGAAAAGCAGTTGAAGT+TGG | - | chr2_4:62808509-62808528 | Msa0341330:intron | 45.0% | |
| CGGAAAAGCAGTTGAAGTTG+GGG | - | chr2_4:62808511-62808530 | Msa0341330:intron | 45.0% | |
| CCATCAACAAAAGCTTTGCC+GGG | + | chr2_4:62808590-62808609 | None:intergenic | 45.0% | |
| GTAACCCGTGAGTTTCAAAC+TGG | + | chr2_4:62809007-62809026 | None:intergenic | 45.0% | |
| GTAACAGAGCTTGACTCAAC+AGG | + | chr2_4:62809031-62809050 | None:intergenic | 45.0% | |
| ! | ACGATTGATTTCATCACCGC+AGG | - | chr2_4:62809359-62809378 | Msa0341330:intron | 45.0% |
| ! | ATTGATTTCATCACCGCAGG+TGG | - | chr2_4:62809362-62809381 | Msa0341330:intron | 45.0% |
| !! | CCACTTAGCTTTTGCAACTC+TGG | + | chr2_4:62809491-62809510 | None:intergenic | 45.0% |
| CCAGAGTTGCAAAAGCTAAG+TGG | - | chr2_4:62809488-62809507 | Msa0341330:intron | 45.0% | |
| !! | TTCTTTGAGGCTTTCCCTCT+GGG | + | chr2_4:62809542-62809561 | None:intergenic | 45.0% |
| !! | TTTCTTTGAGGCTTTCCCTC+TGG | + | chr2_4:62809543-62809562 | None:intergenic | 45.0% |
| CAAATCAAAGAAGGGGACGA+AGG | - | chr2_4:62809616-62809635 | Msa0341330:intron | 45.0% | |
| GAAAAGAAGAAACCAGGCTC+GGG | - | chr2_4:62809743-62809762 | Msa0341330:intron | 45.0% | |
| AAAAGAAGAAACCAGGCTCG+GGG | - | chr2_4:62809744-62809763 | Msa0341330:intron | 45.0% | |
| !! | CTGTTGTTCTAGAGCAGAGT+AGG | + | chr2_4:62809905-62809924 | None:intergenic | 45.0% |
| !! | CTCTGCTCTAGAACAACAGA+AGG | - | chr2_4:62809906-62809925 | Msa0341330:CDS | 45.0% |
| !! | GCTCTAGAACAACAGAAGGA+TGG | - | chr2_4:62809910-62809929 | Msa0341330:CDS | 45.0% |
| ATCATGCGAATCTATGCTGC+AGG | + | chr2_4:62809947-62809966 | None:intergenic | 45.0% | |
| ACATTGAAGCTCCCGTTAGT+AGG | - | chr2_4:62810149-62810168 | Msa0341330:five_prime_UTR | 45.0% | |
| !!! | AAAAATATTTTTAATTTGTT+GGG | + | chr2_4:62810129-62810148 | None:intergenic | 5.0% |
| !!! | TAAAAATATTTTTAATTTGT+TGG | + | chr2_4:62810130-62810149 | None:intergenic | 5.0% |
| GCGGTGGAAGAGAACTGTAT+CGG | - | chr2_4:62803911-62803930 | Msa0341330:three_prime_UTR | 50.0% | |
| CGGTGGAAGAGAACTGTATC+GGG | - | chr2_4:62803912-62803931 | Msa0341330:three_prime_UTR | 50.0% | |
| AGACGATTGTTGCAGCTCGT+CGG | - | chr2_4:62804023-62804042 | Msa0341330:three_prime_UTR | 50.0% | |
| ATTGTTGCAGCTCGTCGGAA+GGG | - | chr2_4:62804028-62804047 | Msa0341330:three_prime_UTR | 50.0% | |
| GTCGGAAGGGGAAGAATATG+TGG | - | chr2_4:62804041-62804060 | Msa0341330:three_prime_UTR | 50.0% | |
| !! | GGCTGGTGCTGTATACATCA+AGG | - | chr2_4:62804194-62804213 | Msa0341330:CDS | 50.0% |
| TGTACCACCCACTACACAGA+AGG | + | chr2_4:62804745-62804764 | None:intergenic | 50.0% | |
| CAGGTCTGCTGTAAATGACG+AGG | - | chr2_4:62804892-62804911 | Msa0341330:intron | 50.0% | |
| ! | CAACCCCAAAAGTTGGCTCA+AGG | + | chr2_4:62806085-62806104 | None:intergenic | 50.0% |
| GAAGTTGTGCCTCTGTGCTT+AGG | - | chr2_4:62806228-62806247 | Msa0341330:intron | 50.0% | |
| AGTTGTGCCTCTGTGCTTAG+GGG | - | chr2_4:62806230-62806249 | Msa0341330:intron | 50.0% | |
| GACAAATCCCCTAAGCACAG+AGG | + | chr2_4:62806240-62806259 | None:intergenic | 50.0% | |
| ACATTGCTGCAGCTAGACGA+TGG | - | chr2_4:62806376-62806395 | Msa0341330:intron | 50.0% | |
| !! | GATATGGGAGGCACTGATGT+TGG | + | chr2_4:62806536-62806555 | None:intergenic | 50.0% |
| TTGTGTCTGTGTGTGGGCAA+TGG | - | chr2_4:62807452-62807471 | Msa0341330:intron | 50.0% | |
| TCCAGGCAAGGATTCATCCA+CGG | - | chr2_4:62808187-62808206 | Msa0341330:intron | 50.0% | |
| CAGATAGCTTCTAGCCTGTC+AGG | - | chr2_4:62808210-62808229 | Msa0341330:intron | 50.0% | |
| TTGAGCAGCTTTCTCCTGAC+AGG | + | chr2_4:62808227-62808246 | None:intergenic | 50.0% | |
| TTTCGATGGGGGAAAAAGCC+TGG | - | chr2_4:62808419-62808438 | Msa0341330:intron | 50.0% | |
| CATTCCCGTGAAAAGAAGCC+CGG | - | chr2_4:62808569-62808588 | Msa0341330:intron | 50.0% | |
| ! | TTTGCCGGGCTTCTTTTCAC+GGG | + | chr2_4:62808576-62808595 | None:intergenic | 50.0% |
| ! | CTTTGCCGGGCTTCTTTTCA+CGG | + | chr2_4:62808577-62808596 | None:intergenic | 50.0% |
| ! | CCCGGCAAAGCTTTTGTTGA+TGG | - | chr2_4:62808587-62808606 | Msa0341330:intron | 50.0% |
| AAAGAAACTGGCAAGCCCAG+AGG | - | chr2_4:62809524-62809543 | Msa0341330:intron | 50.0% | |
| AAGAAACTGGCAAGCCCAGA+GGG | - | chr2_4:62809525-62809544 | Msa0341330:intron | 50.0% | |
| GATTGTTGCAGCTCGTCGGA+AGG | - | chr2_4:62804027-62804046 | Msa0341330:three_prime_UTR | 55.0% | |
| TTGTTGCAGCTCGTCGGAAG+GGG | - | chr2_4:62804029-62804048 | Msa0341330:three_prime_UTR | 55.0% | |
| GCTGCAGCTAGACGATGGTT+TGG | - | chr2_4:62806381-62806400 | Msa0341330:intron | 55.0% | |
| GTGCCTCCCATATCTGAGCT+TGG | - | chr2_4:62806542-62806561 | Msa0341330:intron | 55.0% | |
| GGTCCAAGCTCAGATATGGG+AGG | + | chr2_4:62806548-62806567 | None:intergenic | 55.0% | |
| GTTAGGCTGTCACCTTCCTG+AGG | - | chr2_4:62807542-62807561 | Msa0341330:intron | 55.0% | |
| AGGCTAGAAGCTATCTGCCG+TGG | + | chr2_4:62808207-62808226 | None:intergenic | 55.0% | |
| !! | GTAGCCGTTTTCCCCTTGAG+TGG | - | chr2_4:62808387-62808406 | Msa0341330:intron | 55.0% |
| ATTTCATCACCGCAGGTGGC+AGG | - | chr2_4:62809366-62809385 | Msa0341330:intron | 55.0% | |
| TTTCATCACCGCAGGTGGCA+GGG | - | chr2_4:62809367-62809386 | Msa0341330:intron | 55.0% | |
| !! | TGACGGCGCTGACGAGAATT+TGG | - | chr2_4:62809586-62809605 | Msa0341330:intron | 55.0% |
| AACCAGGCTCGGGGACTAAT+AGG | - | chr2_4:62809753-62809772 | Msa0341330:intron | 55.0% | |
| TTCCTATTAGTCCCCGAGCC+TGG | + | chr2_4:62809758-62809777 | None:intergenic | 55.0% | |
| GCAGAGTAGGAACACAGCCA+TGG | + | chr2_4:62809892-62809911 | None:intergenic | 55.0% | |
| GTGCTCCGTCGTCACTGTGA+TGG | + | chr2_4:62803854-62803873 | None:intergenic | 60.0% | |
| GTGACGACGGAGCACAATGC+CGG | - | chr2_4:62803859-62803878 | Msa0341330:three_prime_UTR | 60.0% | |
| GAGCACAATGCCGGAGCTAC+CGG | - | chr2_4:62803868-62803887 | Msa0341330:three_prime_UTR | 60.0% | |
| CGTTGAGATCCCACACCCGT+TGG | - | chr2_4:62806012-62806031 | Msa0341330:intron | 60.0% | |
| GCCGTGGATGAATCCTTGCC+TGG | + | chr2_4:62808191-62808210 | None:intergenic | 60.0% | |
| ATGGCATACCCTGCCACCTG+CGG | + | chr2_4:62809378-62809397 | None:intergenic | 60.0% | |
| CACAATGCCGGAGCTACCGG+AGG | - | chr2_4:62803871-62803890 | Msa0341330:three_prime_UTR | 65.0% | |
| GCCTCTACCTCCGGTAGCTC+CGG | + | chr2_4:62803881-62803900 | None:intergenic | 65.0% | |
| GGAGCTACCGGAGGTAGAGG+CGG | - | chr2_4:62803880-62803899 | Msa0341330:three_prime_UTR | 65.0% | |
| CTTCTCGCCGCCTCTACCTC+CGG | + | chr2_4:62803890-62803909 | None:intergenic | 65.0% | |
| GGTAGAGGCGGCGAGAAGAG+CGG | - | chr2_4:62803892-62803911 | Msa0341330:three_prime_UTR | 65.0% | |
| GCCGGAGCTACCGGAGGTAG+AGG | - | chr2_4:62803877-62803896 | Msa0341330:three_prime_UTR | 70.0% | |
| AGAGGCGGCGAGAAGAGCGG+TGG | - | chr2_4:62803895-62803914 | Msa0341330:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 62803757 | 62810188 | 62803757 | ID=Msa0341330;Name=Msa0341330 |
| chr2_4 | mRNA | 62803757 | 62810188 | 62803757 | ID=Msa0341330-mRNA-1;Parent=Msa0341330;Name=Msa0341330-mRNA-1;_AED=0.33;_eAED=0.33;_QI=118|1|1|1|1|1|10|329|395 |
| chr2_4 | exon | 62803757 | 62804472 | 62803757 | ID=Msa0341330-mRNA-1:exon:20094;Parent=Msa0341330-mRNA-1 |
| chr2_4 | exon | 62804557 | 62804591 | 62804557 | ID=Msa0341330-mRNA-1:exon:20093;Parent=Msa0341330-mRNA-1 |
| chr2_4 | exon | 62805337 | 62805439 | 62805337 | ID=Msa0341330-mRNA-1:exon:20092;Parent=Msa0341330-mRNA-1 |
| chr2_4 | exon | 62805676 | 62805753 | 62805676 | ID=Msa0341330-mRNA-1:exon:20091;Parent=Msa0341330-mRNA-1 |
| chr2_4 | exon | 62806985 | 62807035 | 62806985 | ID=Msa0341330-mRNA-1:exon:20090;Parent=Msa0341330-mRNA-1 |
| chr2_4 | exon | 62807287 | 62807412 | 62807287 | ID=Msa0341330-mRNA-1:exon:20089;Parent=Msa0341330-mRNA-1 |
| chr2_4 | exon | 62807489 | 62807557 | 62807489 | ID=Msa0341330-mRNA-1:exon:20088;Parent=Msa0341330-mRNA-1 |
| chr2_4 | exon | 62808993 | 62809050 | 62808993 | ID=Msa0341330-mRNA-1:exon:20087;Parent=Msa0341330-mRNA-1 |
| chr2_4 | exon | 62809704 | 62809755 | 62809704 | ID=Msa0341330-mRNA-1:exon:20086;Parent=Msa0341330-mRNA-1 |
| chr2_4 | exon | 62809842 | 62810188 | 62809842 | ID=Msa0341330-mRNA-1:exon:20085;Parent=Msa0341330-mRNA-1 |
| chr2_4 | five_prime_UTR | 62810071 | 62810188 | 62810071 | ID=Msa0341330-mRNA-1:five_prime_utr;Parent=Msa0341330-mRNA-1 |
| chr2_4 | CDS | 62809842 | 62810070 | 62809842 | ID=Msa0341330-mRNA-1:cds;Parent=Msa0341330-mRNA-1 |
| chr2_4 | CDS | 62809704 | 62809755 | 62809704 | ID=Msa0341330-mRNA-1:cds;Parent=Msa0341330-mRNA-1 |
| chr2_4 | CDS | 62808993 | 62809050 | 62808993 | ID=Msa0341330-mRNA-1:cds;Parent=Msa0341330-mRNA-1 |
| chr2_4 | CDS | 62807489 | 62807557 | 62807489 | ID=Msa0341330-mRNA-1:cds;Parent=Msa0341330-mRNA-1 |
| chr2_4 | CDS | 62807287 | 62807412 | 62807287 | ID=Msa0341330-mRNA-1:cds;Parent=Msa0341330-mRNA-1 |
| chr2_4 | CDS | 62806985 | 62807035 | 62806985 | ID=Msa0341330-mRNA-1:cds;Parent=Msa0341330-mRNA-1 |
| chr2_4 | CDS | 62805676 | 62805753 | 62805676 | ID=Msa0341330-mRNA-1:cds;Parent=Msa0341330-mRNA-1 |
| chr2_4 | CDS | 62805337 | 62805439 | 62805337 | ID=Msa0341330-mRNA-1:cds;Parent=Msa0341330-mRNA-1 |
| chr2_4 | CDS | 62804557 | 62804591 | 62804557 | ID=Msa0341330-mRNA-1:cds;Parent=Msa0341330-mRNA-1 |
| chr2_4 | CDS | 62804086 | 62804472 | 62804086 | ID=Msa0341330-mRNA-1:cds;Parent=Msa0341330-mRNA-1 |
| chr2_4 | three_prime_UTR | 62803757 | 62804085 | 62803757 | ID=Msa0341330-mRNA-1:three_prime_utr;Parent=Msa0341330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
