Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0836650 | XP_003611751.2 | 92.361 | 288 | 21 | 1 | 1 | 287 | 1 | 288 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0836650 | sp|P22335|HSF24_SOLPE | 57.732 | 291 | 89 | 8 | 1 | 268 | 1 | 280 | 1.25e-95 | 286 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0836650 | I3SQU1 | 92.361 | 288 | 21 | 1 | 1 | 287 | 1 | 288 | 0.0 | 531 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0836650 | TF | HSF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001380 | Msa0836650 | 0.805215 | 1.486739e-49 | -8.615850e-47 |
| Msa0012710 | Msa0836650 | 0.802627 | 5.129102e-49 | -8.615850e-47 |
| Msa0017320 | Msa0836650 | 0.806226 | 9.117672e-50 | -8.615850e-47 |
| Msa0033850 | Msa0836650 | 0.817521 | 3.158527e-52 | -8.615850e-47 |
| Msa0042550 | Msa0836650 | 0.825670 | 4.129404e-54 | -8.615850e-47 |
| Msa0045910 | Msa0836650 | 0.806625 | 7.509640e-50 | -8.615850e-47 |
| Msa0058310 | Msa0836650 | 0.800233 | 1.586227e-48 | -8.615850e-47 |
| Msa0061500 | Msa0836650 | 0.811711 | 6.106235e-51 | -8.615850e-47 |
| Msa0064110 | Msa0836650 | 0.812919 | 3.327120e-51 | -8.615850e-47 |
| Msa0076700 | Msa0836650 | 0.809046 | 2.295921e-50 | -8.615850e-47 |
| Msa0081620 | Msa0836650 | 0.823832 | 1.119975e-53 | -8.615850e-47 |
| Msa0092410 | Msa0836650 | 0.845458 | 4.009958e-59 | -8.615850e-47 |
| Msa0102140 | Msa0836650 | 0.820021 | 8.546564e-53 | -8.615850e-47 |
| Msa0624120 | Msa0836650 | 0.854972 | 8.617856e-62 | -8.615850e-47 |
| Msa0627350 | Msa0836650 | 0.802895 | 4.514761e-49 | -8.615850e-47 |
| Msa0641340 | Msa0836650 | 0.805043 | 1.615220e-49 | -8.615850e-47 |
| Msa0661720 | Msa0836650 | 0.809834 | 1.555803e-50 | -8.615850e-47 |
| Msa0713380 | Msa0836650 | 0.805493 | 1.299979e-49 | -8.615850e-47 |
| Msa0714990 | Msa0836650 | 0.988179 | 5.163631e-173 | -8.615850e-47 |
| Msa0715410 | Msa0836650 | 0.800959 | 1.128491e-48 | -8.615850e-47 |
| Msa0721340 | Msa0836650 | 0.852999 | 3.193087e-61 | -8.615850e-47 |
| Msa0741070 | Msa0836650 | 0.811773 | 5.920327e-51 | -8.615850e-47 |
| Msa0750810 | Msa0836650 | 0.823006 | 1.747182e-53 | -8.615850e-47 |
| Msa0757020 | Msa0836650 | 0.983103 | 7.736940e-157 | -8.615850e-47 |
| Msa0758250 | Msa0836650 | 0.837364 | 5.430357e-57 | -8.615850e-47 |
| Msa0773310 | Msa0836650 | 0.802348 | 5.854752e-49 | -8.615850e-47 |
| Msa0776750 | Msa0836650 | 0.804180 | 2.445118e-49 | -8.615850e-47 |
| Msa0779260 | Msa0836650 | 0.813736 | 2.200676e-51 | -8.615850e-47 |
| Msa0786070 | Msa0836650 | 0.805464 | 1.318372e-49 | -8.615850e-47 |
| Msa0789560 | Msa0836650 | 0.803296 | 3.731109e-49 | -8.615850e-47 |
| Msa0794210 | Msa0836650 | 0.836158 | 1.102347e-56 | -8.615850e-47 |
| Msa0797250 | Msa0836650 | 0.809313 | 2.012513e-50 | -8.615850e-47 |
| Msa0798010 | Msa0836650 | 0.879219 | 1.489289e-69 | -8.615850e-47 |
| Msa0805420 | Msa0836650 | 0.807394 | 5.163689e-50 | -8.615850e-47 |
| Msa0808100 | Msa0836650 | 0.811894 | 5.572162e-51 | -8.615850e-47 |
| Msa0809140 | Msa0836650 | 0.815813 | 7.627627e-52 | -8.615850e-47 |
| Msa0836650 | Msa0837870 | 0.804623 | 1.976570e-49 | -8.615850e-47 |
| Msa0836650 | Msa0842770 | 0.801114 | 1.048885e-48 | -8.615850e-47 |
| Msa0836650 | Msa0845070 | 0.825969 | 3.506580e-54 | -8.615850e-47 |
| Msa0836650 | Msa0857300 | 0.803773 | 2.970763e-49 | -8.615850e-47 |
| Msa0836650 | Msa0862280 | 0.814538 | 1.463755e-51 | -8.615850e-47 |
| Msa0836650 | Msa0865970 | 0.815269 | 1.007934e-51 | -8.615850e-47 |
| Msa0836650 | Msa0866070 | 0.821857 | 3.229775e-53 | -8.615850e-47 |
| Msa0836650 | Msa0877710 | 0.802137 | 6.471133e-49 | -8.615850e-47 |
| Msa0836650 | Msa0902830 | 0.845229 | 4.625709e-59 | -8.615850e-47 |
| Msa0836650 | Msa0936390 | 0.803054 | 4.186812e-49 | -8.615850e-47 |
| Msa0836650 | Msa0972810 | 0.830963 | 2.184186e-55 | -8.615850e-47 |
| Msa0836650 | Msa1008750 | 0.808933 | 2.427842e-50 | -8.615850e-47 |
| Msa0836650 | Msa1024680 | 0.840562 | 8.069169e-58 | -8.615850e-47 |
| Msa0836650 | Msa1026640 | 0.812643 | 3.823466e-51 | -8.615850e-47 |
| Msa0836650 | Msa1029390 | 0.816389 | 5.672698e-52 | -8.615850e-47 |
| Msa0836650 | Msa1039760 | 0.807032 | 6.160812e-50 | -8.615850e-47 |
| Msa0836650 | Msa1043120 | 0.841757 | 3.915089e-58 | -8.615850e-47 |
| Msa0836650 | Msa1063400 | 0.816365 | 5.741566e-52 | -8.615850e-47 |
| Msa0836650 | Msa1063420 | 0.831197 | 1.913897e-55 | -8.615850e-47 |
| Msa0836650 | Msa1068250 | 0.807207 | 5.657911e-50 | -8.615850e-47 |
| Msa0836650 | Msa1073660 | 0.810262 | 1.258269e-50 | -8.615850e-47 |
| Msa0836650 | Msa1077340 | 0.821818 | 3.297680e-53 | -8.615850e-47 |
| Msa0836650 | Msa1096060 | 0.802596 | 5.203511e-49 | -8.615850e-47 |
| Msa0836650 | Msa1115280 | 0.841772 | 3.879289e-58 | -8.615850e-47 |
| Msa0836650 | Msa1143020 | 0.810217 | 1.286114e-50 | -8.615850e-47 |
| Msa0836650 | Msa1152410 | 0.810711 | 1.006426e-50 | -8.615850e-47 |
| Msa0836650 | Msa1173490 | 0.822543 | 2.238823e-53 | -8.615850e-47 |
| Msa0836650 | Msa1184790 | 0.803107 | 4.080991e-49 | -8.615850e-47 |
| Msa0836650 | Msa1209190 | 0.834366 | 3.124051e-56 | -8.615850e-47 |
| Msa0836650 | Msa1209860 | 0.815196 | 1.046319e-51 | -8.615850e-47 |
| Msa0836650 | Msa1214170 | 0.834446 | 2.984006e-56 | -8.615850e-47 |
| Msa0836650 | Msa1215070 | 0.803412 | 3.530323e-49 | -8.615850e-47 |
| Msa0836650 | Msa1225200 | 0.816163 | 6.370114e-52 | -8.615850e-47 |
| Msa0836650 | Msa1225600 | 0.840064 | 1.088783e-57 | -8.615850e-47 |
| Msa0836650 | Msa1235390 | 0.836495 | 9.048217e-57 | -8.615850e-47 |
| Msa0836650 | Msa1241570 | 0.800080 | 1.704356e-48 | -8.615850e-47 |
| Msa0836650 | Msa1246700 | 0.818369 | 2.031948e-52 | -8.615850e-47 |
| Msa0836650 | Msa1259270 | 0.800989 | 1.112287e-48 | -8.615850e-47 |
| Msa0836650 | Msa1270660 | 0.811462 | 6.918465e-51 | -8.615850e-47 |
| Msa0836650 | Msa1270730 | 0.815777 | 7.770763e-52 | -8.615850e-47 |
| Msa0836650 | Msa1291450 | 0.814571 | 1.439579e-51 | -8.615850e-47 |
| Msa0836650 | Msa1307550 | 0.814021 | 1.904754e-51 | -8.615850e-47 |
| Msa0836650 | Msa1329800 | 0.807555 | 4.773819e-50 | -8.615850e-47 |
| Msa0836650 | Msa1332050 | 0.823033 | 1.722308e-53 | -8.615850e-47 |
| Msa0836650 | Msa1335230 | 0.831151 | 1.963916e-55 | -8.615850e-47 |
| Msa0836650 | Msa1338400 | 0.800294 | 1.541722e-48 | -8.615850e-47 |
| Msa0836650 | Msa1343250 | 0.809949 | 1.469131e-50 | -8.615850e-47 |
| Msa0836650 | Msa1349450 | 0.835736 | 1.410239e-56 | -8.615850e-47 |
| Msa0836650 | Msa1359320 | 0.840009 | 1.125430e-57 | -8.615850e-47 |
| Msa0836650 | Msa1360020 | 0.837681 | 4.502623e-57 | -8.615850e-47 |
| Msa0836650 | Msa1372150 | 0.832576 | 8.736706e-56 | -8.615850e-47 |
| Msa0836650 | Msa1376450 | 0.821563 | 3.778039e-53 | -8.615850e-47 |
| Msa0836650 | Msa1420270 | 0.809714 | 1.650444e-50 | -8.615850e-47 |
| Msa0836650 | Msa1422980 | 0.803607 | 3.215518e-49 | -8.615850e-47 |
| Msa0836650 | Msa1423820 | 0.816430 | 5.553265e-52 | -8.615850e-47 |
| Msa0836650 | Msa1424630 | 0.850538 | 1.591992e-60 | -8.615850e-47 |
| Msa0836650 | Msa1426710 | 0.814561 | 1.447237e-51 | -8.615850e-47 |
| Msa0836650 | Msa1430550 | 0.861082 | 1.317078e-63 | -8.615850e-47 |
| Msa0836650 | Msa1442790 | 0.824672 | 7.108894e-54 | -8.615850e-47 |
| Msa0836650 | Msa1457160 | 0.803311 | 3.704077e-49 | -8.615850e-47 |
| Msa0836650 | Msa1465180 | 0.806201 | 9.227868e-50 | -8.615850e-47 |
| Msa0136630 | Msa0836650 | 0.807922 | 3.988259e-50 | -8.615850e-47 |
| Msa0143850 | Msa0836650 | 0.819456 | 1.150722e-52 | -8.615850e-47 |
| Msa0152560 | Msa0836650 | 0.823086 | 1.674071e-53 | -8.615850e-47 |
| Msa0173960 | Msa0836650 | 0.811181 | 7.960485e-51 | -8.615850e-47 |
| Msa0174260 | Msa0836650 | 0.836167 | 1.096592e-56 | -8.615850e-47 |
| Msa0178510 | Msa0836650 | 0.834591 | 2.743200e-56 | -8.615850e-47 |
| Msa0183980 | Msa0836650 | 0.801391 | 9.204936e-49 | -8.615850e-47 |
| Msa0186320 | Msa0836650 | 0.814075 | 1.852766e-51 | -8.615850e-47 |
| Msa0186950 | Msa0836650 | 0.840943 | 6.411113e-58 | -8.615850e-47 |
| Msa0187830 | Msa0836650 | 0.843200 | 1.621676e-58 | -8.615850e-47 |
| Msa0190530 | Msa0836650 | 0.812895 | 3.368414e-51 | -8.615850e-47 |
| Msa0190950 | Msa0836650 | 0.857470 | 1.596979e-62 | -8.615850e-47 |
| Msa0193320 | Msa0836650 | 0.803397 | 3.555297e-49 | -8.615850e-47 |
| Msa0194010 | Msa0836650 | 0.802462 | 5.547266e-49 | -8.615850e-47 |
| Msa0194890 | Msa0836650 | 0.801857 | 7.386641e-49 | -8.615850e-47 |
| Msa0197610 | Msa0836650 | 0.804982 | 1.663167e-49 | -8.615850e-47 |
| Msa0201570 | Msa0836650 | 0.814965 | 1.177419e-51 | -8.615850e-47 |
| Msa0202930 | Msa0836650 | 0.808018 | 3.805001e-50 | -8.615850e-47 |
| Msa0218460 | Msa0836650 | 0.804178 | 2.447317e-49 | -8.615850e-47 |
| Msa0220490 | Msa0836650 | 0.801650 | 8.147861e-49 | -8.615850e-47 |
| Msa0222870 | Msa0836650 | 0.820194 | 7.801114e-53 | -8.615850e-47 |
| Msa0222980 | Msa0836650 | 0.831378 | 1.727005e-55 | -8.615850e-47 |
| Msa0233270 | Msa0836650 | 0.842034 | 3.308632e-58 | -8.615850e-47 |
| Msa0234590 | Msa0836650 | 0.822022 | 2.958684e-53 | -8.615850e-47 |
| Msa0235880 | Msa0836650 | 0.812581 | 3.944166e-51 | -8.615850e-47 |
| Msa0236070 | Msa0836650 | 0.808992 | 2.358478e-50 | -8.615850e-47 |
| Msa0374350 | Msa0836650 | 0.804127 | 2.507885e-49 | -8.615850e-47 |
| Msa0386010 | Msa0836650 | 0.808222 | 3.444349e-50 | -8.615850e-47 |
| Msa0403490 | Msa0836650 | 0.842622 | 2.310822e-58 | -8.615850e-47 |
| Msa0408340 | Msa0836650 | 0.833630 | 4.775884e-56 | -8.615850e-47 |
| Msa0422180 | Msa0836650 | 0.809119 | 2.214684e-50 | -8.615850e-47 |
| Msa0429090 | Msa0836650 | 0.814437 | 1.541677e-51 | -8.615850e-47 |
| Msa0457990 | Msa0836650 | 0.813303 | 2.740277e-51 | -8.615850e-47 |
| Msa0463270 | Msa0836650 | 0.809560 | 1.781313e-50 | -8.615850e-47 |
| Msa0475500 | Msa0836650 | 0.800853 | 1.185776e-48 | -8.615850e-47 |
| Msa0240270 | Msa0836650 | 0.838110 | 3.494169e-57 | -8.615850e-47 |
| Msa0253180 | Msa0836650 | 0.802627 | 5.128169e-49 | -8.615850e-47 |
| Msa0253280 | Msa0836650 | 0.803577 | 3.261603e-49 | -8.615850e-47 |
| Msa0264310 | Msa0836650 | 0.820762 | 5.779368e-53 | -8.615850e-47 |
| Msa0269560 | Msa0836650 | 0.866913 | 2.013143e-65 | -8.615850e-47 |
| Msa0271550 | Msa0836650 | 0.828267 | 9.887256e-55 | -8.615850e-47 |
| Msa0277410 | Msa0836650 | 0.815894 | 7.316909e-52 | -8.615850e-47 |
| Msa0282720 | Msa0836650 | 0.810523 | 1.104980e-50 | -8.615850e-47 |
| Msa0284450 | Msa0836650 | 0.835857 | 1.314028e-56 | -8.615850e-47 |
| Msa0307310 | Msa0836650 | 0.808245 | 3.404648e-50 | -8.615850e-47 |
| Msa0311470 | Msa0836650 | 0.841682 | 4.097534e-58 | -8.615850e-47 |
| Msa0311600 | Msa0836650 | 0.819292 | 1.253695e-52 | -8.615850e-47 |
| Msa0319290 | Msa0836650 | 0.820869 | 5.461545e-53 | -8.615850e-47 |
| Msa0322680 | Msa0836650 | 0.802474 | 5.514211e-49 | -8.615850e-47 |
| Msa0347750 | Msa0836650 | 0.809968 | 1.455488e-50 | -8.615850e-47 |
| Msa0501410 | Msa0836650 | 0.806188 | 9.287316e-50 | -8.615850e-47 |
| Msa0506860 | Msa0836650 | 0.833641 | 4.747030e-56 | -8.615850e-47 |
| Msa0514610 | Msa0836650 | 0.818770 | 1.647692e-52 | -8.615850e-47 |
| Msa0524440 | Msa0836650 | 0.806768 | 7.007487e-50 | -8.615850e-47 |
| Msa0530650 | Msa0836650 | 0.800611 | 1.328960e-48 | -8.615850e-47 |
| Msa0538160 | Msa0836650 | 0.819260 | 1.275231e-52 | -8.615850e-47 |
| Msa0559500 | Msa0836650 | 0.801484 | 8.810564e-49 | -8.615850e-47 |
| Msa0559510 | Msa0836650 | 0.802282 | 6.041925e-49 | -8.615850e-47 |
| Msa0566350 | Msa0836650 | 0.819129 | 1.365463e-52 | -8.615850e-47 |
| Msa0566750 | Msa0836650 | 0.822681 | 2.079791e-53 | -8.615850e-47 |
| Msa0569780 | Msa0836650 | 0.801954 | 7.057219e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0836650 | MtrunA17_Chr5g0402291 | 92.361 | 288 | 21 | 1 | 1 | 287 | 1 | 288 | 0.0 | 531 |
| Msa0836650 | MtrunA17_Chr8g0375041 | 49.434 | 265 | 104 | 6 | 1 | 255 | 1 | 245 | 1.95e-75 | 231 |
| Msa0836650 | MtrunA17_Chr5g0397881 | 44.981 | 269 | 120 | 7 | 2 | 252 | 17 | 275 | 3.93e-64 | 205 |
| Msa0836650 | MtrunA17_Chr3g0134031 | 46.789 | 218 | 86 | 5 | 2 | 193 | 17 | 230 | 3.28e-56 | 185 |
| Msa0836650 | MtrunA17_Chr1g0203601 | 40.230 | 261 | 104 | 6 | 2 | 235 | 11 | 246 | 1.34e-51 | 171 |
| Msa0836650 | MtrunA17_Chr6g0472421 | 44.186 | 215 | 82 | 2 | 2 | 191 | 26 | 227 | 7.46e-51 | 170 |
| Msa0836650 | MtrunA17_Chr7g0257331 | 43.850 | 187 | 81 | 1 | 3 | 189 | 16 | 178 | 5.35e-49 | 162 |
| Msa0836650 | MtrunA17_Chr5g0441531 | 39.754 | 244 | 118 | 6 | 2 | 235 | 18 | 242 | 1.63e-48 | 162 |
| Msa0836650 | MtrunA17_Chr5g0410881 | 46.961 | 181 | 70 | 3 | 1 | 181 | 24 | 178 | 1.12e-43 | 155 |
| Msa0836650 | MtrunA17_Chr7g0260331 | 68.421 | 95 | 30 | 0 | 6 | 100 | 46 | 140 | 4.07e-43 | 150 |
| Msa0836650 | MtrunA17_Chr6g0467041 | 57.522 | 113 | 45 | 1 | 8 | 117 | 21 | 133 | 4.96e-42 | 147 |
| Msa0836650 | MtrunA17_Chr8g0379701 | 39.252 | 214 | 92 | 4 | 5 | 217 | 8 | 184 | 1.16e-40 | 145 |
| Msa0836650 | MtrunA17_Chr1g0185131 | 62.626 | 99 | 37 | 0 | 7 | 105 | 30 | 128 | 1.46e-39 | 141 |
| Msa0836650 | MtrunA17_Chr4g0071051 | 63.830 | 94 | 34 | 0 | 6 | 99 | 98 | 191 | 3.18e-39 | 142 |
| Msa0836650 | MtrunA17_Chr4g0039891 | 39.500 | 200 | 89 | 3 | 9 | 208 | 12 | 179 | 1.23e-38 | 141 |
| Msa0836650 | MtrunA17_Chr8g0378061 | 55.856 | 111 | 46 | 1 | 10 | 117 | 23 | 133 | 4.35e-38 | 140 |
| Msa0836650 | MtrunA17_Chr3g0135831 | 55.556 | 108 | 46 | 1 | 6 | 113 | 43 | 148 | 3.91e-37 | 135 |
| Msa0836650 | MtrunA17_Chr2g0284481 | 39.894 | 188 | 80 | 4 | 9 | 193 | 15 | 172 | 4.07e-37 | 135 |
| Msa0836650 | MtrunA17_Chr2g0330821 | 52.991 | 117 | 52 | 1 | 6 | 119 | 76 | 192 | 1.27e-36 | 133 |
| Msa0836650 | MtrunA17_Chr1g0204741 | 35.468 | 203 | 117 | 3 | 6 | 208 | 37 | 225 | 1.74e-36 | 132 |
| Msa0836650 | MtrunA17_Chr6g0485571 | 57.843 | 102 | 43 | 0 | 1 | 102 | 3 | 104 | 3.27e-36 | 132 |
| Msa0836650 | MtrunA17_Chr4g0047421 | 35.644 | 202 | 104 | 5 | 6 | 203 | 30 | 209 | 1.44e-34 | 124 |
| Msa0836650 | MtrunA17_Chr8g0392001 | 44.382 | 178 | 65 | 5 | 8 | 181 | 21 | 168 | 2.97e-34 | 127 |
| Msa0836650 | MtrunA17_Chr1g0179321 | 60.606 | 66 | 26 | 0 | 3 | 68 | 43 | 108 | 3.81e-22 | 89.0 |
| Msa0836650 | MtrunA17_Chr4g0023771 | 53.846 | 65 | 30 | 0 | 2 | 66 | 8 | 72 | 9.13e-17 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0836650 | AT4G36990.1 | 49.495 | 297 | 120 | 7 | 2 | 287 | 7 | 284 | 1.63e-80 | 245 |
| Msa0836650 | AT5G62020.1 | 49.268 | 205 | 98 | 3 | 2 | 202 | 16 | 218 | 8.71e-55 | 179 |
| Msa0836650 | AT4G11660.1 | 41.758 | 273 | 112 | 9 | 2 | 233 | 52 | 318 | 4.59e-53 | 177 |
| Msa0836650 | AT1G46264.1 | 43.458 | 214 | 96 | 5 | 4 | 197 | 29 | 237 | 8.36e-53 | 176 |
| Msa0836650 | AT2G41690.1 | 44.920 | 187 | 91 | 2 | 7 | 190 | 38 | 215 | 1.27e-48 | 162 |
| Msa0836650 | AT1G32330.1 | 48.864 | 176 | 66 | 2 | 6 | 181 | 34 | 185 | 2.82e-46 | 162 |
| Msa0836650 | AT1G32330.2 | 49.432 | 176 | 65 | 3 | 6 | 181 | 34 | 185 | 2.89e-46 | 162 |
| Msa0836650 | AT4G17750.1 | 68.367 | 98 | 31 | 0 | 5 | 102 | 48 | 145 | 1.43e-43 | 155 |
| Msa0836650 | AT2G26150.1 | 39.796 | 196 | 94 | 2 | 5 | 194 | 40 | 217 | 2.62e-41 | 146 |
| Msa0836650 | AT2G26150.4 | 39.796 | 196 | 94 | 2 | 5 | 194 | 40 | 217 | 2.62e-41 | 146 |
| Msa0836650 | AT3G22830.1 | 37.850 | 214 | 125 | 3 | 5 | 217 | 57 | 263 | 3.15e-41 | 147 |
| Msa0836650 | AT4G13980.1 | 61.000 | 100 | 39 | 0 | 10 | 109 | 24 | 123 | 3.19e-40 | 145 |
| Msa0836650 | AT3G02990.1 | 39.453 | 256 | 116 | 7 | 5 | 258 | 19 | 237 | 3.69e-40 | 145 |
| Msa0836650 | AT3G24520.1 | 37.963 | 216 | 84 | 4 | 8 | 216 | 16 | 188 | 4.27e-39 | 140 |
| Msa0836650 | AT5G16820.1 | 68.478 | 92 | 29 | 0 | 9 | 100 | 27 | 118 | 1.10e-38 | 142 |
| Msa0836650 | AT5G16820.2 | 68.478 | 92 | 29 | 0 | 9 | 100 | 27 | 118 | 1.10e-38 | 142 |
| Msa0836650 | AT5G43840.1 | 55.963 | 109 | 48 | 0 | 5 | 113 | 15 | 123 | 2.68e-38 | 136 |
| Msa0836650 | AT3G51910.1 | 57.692 | 104 | 43 | 1 | 6 | 109 | 26 | 128 | 1.57e-37 | 134 |
| Msa0836650 | AT5G03720.2 | 41.711 | 187 | 83 | 3 | 9 | 189 | 55 | 221 | 1.72e-37 | 137 |
| Msa0836650 | AT5G03720.1 | 41.711 | 187 | 83 | 3 | 9 | 189 | 55 | 221 | 1.72e-37 | 137 |
| Msa0836650 | AT5G54070.1 | 59.783 | 92 | 37 | 0 | 8 | 99 | 70 | 161 | 4.70e-36 | 132 |
| Msa0836650 | AT3G63350.1 | 56.701 | 97 | 42 | 0 | 3 | 99 | 22 | 118 | 2.74e-34 | 126 |
| Msa0836650 | AT1G67970.1 | 57.273 | 110 | 44 | 2 | 8 | 116 | 18 | 125 | 3.15e-33 | 125 |
| Msa0836650 | AT4G18880.1 | 54.310 | 116 | 53 | 0 | 5 | 120 | 11 | 126 | 1.06e-32 | 124 |
| Msa0836650 | AT5G45710.3 | 40.625 | 192 | 78 | 3 | 5 | 193 | 9 | 167 | 3.20e-32 | 122 |
| Msa0836650 | AT5G45710.1 | 40.625 | 192 | 78 | 3 | 5 | 193 | 9 | 167 | 3.20e-32 | 122 |
| Msa0836650 | AT4G18870.1 | 44.565 | 92 | 51 | 0 | 5 | 96 | 142 | 233 | 4.73e-22 | 93.6 |
| Msa0836650 | AT4G18870.1 | 44.681 | 94 | 47 | 3 | 5 | 96 | 9 | 99 | 2.24e-19 | 86.3 |
| Msa0836650 | AT1G77570.1 | 40.909 | 88 | 47 | 3 | 10 | 93 | 27 | 113 | 2.14e-13 | 66.6 |
Find 80 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCTCGTTTCTTCCTTTC+TGG | 0.040301 | 5_4:-10202407 | Msa0836650:five_prime_UTR |
| CCACATCTAAGAAATTAATT+TGG | 0.180721 | 5_4:+10202481 | None:intergenic |
| ATATTCTCCTTCAATGTCTT+TGG | 0.217872 | 5_4:+10202554 | None:intergenic |
| TCCTTTCTGGTTTCTATTGT+TGG | 0.230031 | 5_4:-10202394 | Msa0836650:five_prime_UTR |
| TAATTGTAATCTAGGTAATA+TGG | 0.238356 | 5_4:-10199795 | Msa0836650:three_prime_UTR |
| AGAACCAACGTCACTTATTA+AGG | 0.240591 | 5_4:-10202621 | Msa0836650:five_prime_UTR |
| GAAAGCTTGTGCCAGATAAA+TGG | 0.251473 | 5_4:-10200627 | Msa0836650:CDS |
| ATAATTCCCCATACGAAAAT+AGG | 0.260531 | 5_4:+10202516 | None:intergenic |
| TTAGATGTGGCTTAAGCTAA+TGG | 0.287412 | 5_4:-10202468 | Msa0836650:five_prime_UTR |
| TTTGCAAATTCCCATTTATC+TGG | 0.289664 | 5_4:+10200616 | None:intergenic |
| TTGTTGTGCTTAAAATATTT+AGG | 0.304096 | 5_4:+10202041 | None:intergenic |
| CTGGTTTCTATTGTTGGGAT+TGG | 0.306018 | 5_4:-10202388 | Msa0836650:five_prime_UTR |
| CCTTTCTGGTTTCTATTGTT+GGG | 0.310708 | 5_4:-10202393 | Msa0836650:five_prime_UTR |
| TGGTTTCTATTGTTGGGATT+GGG | 0.347860 | 5_4:-10202387 | Msa0836650:five_prime_UTR |
| GTTTGAAATTGTTTGGTGTT+TGG | 0.347895 | 5_4:-10200159 | Msa0836650:CDS |
| GGATCCTGCTCCGTCGTTGC+CGG | 0.352068 | 5_4:+10200465 | None:intergenic |
| ATTTATCTGGCACAAGCTTT+CGG | 0.357484 | 5_4:+10200629 | None:intergenic |
| TATTCTCCTTCAATGTCTTT+GGG | 0.359473 | 5_4:+10202555 | None:intergenic |
| CCGTCGTTGCCGGAGTTTGA+TGG | 0.360239 | 5_4:+10200475 | None:intergenic |
| CGAAACCTTGAGTTGTGAAT+TGG | 0.361410 | 5_4:-10200335 | Msa0836650:CDS |
| CACATCTAAGAAATTAATTT+GGG | 0.362304 | 5_4:+10202482 | None:intergenic |
| GTTGGTGAAGTTGAAGAAAA+TGG | 0.365129 | 5_4:-10200190 | Msa0836650:CDS |
| CGTGTGGAACCGGTTTCATT+TGG | 0.394345 | 5_4:-10202679 | Msa0836650:five_prime_UTR |
| GTTGTTGTTTCCACTGATCC+AGG | 0.401148 | 5_4:+10200412 | None:intergenic |
| CTCGATAAGTTAACATATTG+AGG | 0.405483 | 5_4:+10200385 | None:intergenic |
| ATTATGCGATCGATTTGATC+TGG | 0.408543 | 5_4:+10200250 | None:intergenic |
| TGTTATCATGTTGTCTGGTT+TGG | 0.415002 | 5_4:-10199649 | Msa0836650:three_prime_UTR |
| AGAGATTGTTTGAAATTGTT+TGG | 0.415249 | 5_4:-10200166 | Msa0836650:CDS |
| GTTGTTGTTATCATGTTGTC+TGG | 0.416787 | 5_4:-10199654 | Msa0836650:three_prime_UTR |
| TCTATTGGTACGTGTGGAAC+CGG | 0.422455 | 5_4:-10202689 | Msa0836650:five_prime_UTR |
| CTTGAACACATGAAAGAAAC+AGG | 0.422879 | 5_4:+10199835 | None:intergenic |
| CATATCTATCATCAATCTAT+TGG | 0.424088 | 5_4:-10202704 | Msa0836650:five_prime_UTR |
| GAGGCCCACCATAGCTCAAT+TGG | 0.429636 | 5_4:+10200080 | None:intergenic |
| CATTATTGACCAAATGAAAC+CGG | 0.432836 | 5_4:+10202670 | None:intergenic |
| TAATTAGTTATCATCATGGT+TGG | 0.448542 | 5_4:-10199879 | Msa0836650:three_prime_UTR |
| TGAGTTGGAGGAAGAGGTTG+AGG | 0.450915 | 5_4:+10200441 | None:intergenic |
| AAAGCTTGTGCCAGATAAAT+GGG | 0.453955 | 5_4:-10200626 | Msa0836650:CDS |
| CCAAATTAATTTCTTAGATG+TGG | 0.468547 | 5_4:-10202481 | Msa0836650:five_prime_UTR |
| AATGTCGCAGCGGTCGGCGC+CGG | 0.469760 | 5_4:-10202189 | Msa0836650:CDS |
| CCAACGTCACTTATTAAGGT+TGG | 0.477628 | 5_4:-10202617 | Msa0836650:five_prime_UTR |
| ATATACTAATAATCAATGTA+TGG | 0.480082 | 5_4:-10199736 | Msa0836650:three_prime_UTR |
| TGGAGAGTTGTCATTGATGC+TGG | 0.489530 | 5_4:+10200495 | None:intergenic |
| ACAACCGTCGTCACAACCCC+TGG | 0.491280 | 5_4:-10200530 | Msa0836650:CDS |
| TCTAAAAGACAATTTAAATG+TGG | 0.501767 | 5_4:-10200275 | Msa0836650:CDS |
| CTAAAAGACAATTTAAATGT+GGG | 0.505450 | 5_4:-10200274 | Msa0836650:CDS |
| ATCTGAAATGTGGCAAGCTA+AGG | 0.505904 | 5_4:+10199967 | None:intergenic |
| TATCGGTGAGGAGGTGTTTG+TGG | 0.509612 | 5_4:+10200575 | None:intergenic |
| ACAGTAATTAGTTATCATCA+TGG | 0.520769 | 5_4:-10199883 | Msa0836650:three_prime_UTR |
| AACTCCGGCAACGACGGAGC+AGG | 0.525429 | 5_4:-10200469 | Msa0836650:CDS |
| GTTGGAGGAAGAGGTTGAGG+TGG | 0.526221 | 5_4:+10200444 | None:intergenic |
| GTCTCGCCCAAAGACATTGA+AGG | 0.526921 | 5_4:-10202561 | Msa0836650:five_prime_UTR |
| GAAATAAGCAATAAGAAGAG+AGG | 0.527898 | 5_4:-10200112 | Msa0836650:CDS |
| TTGTTGTTTCCACTGATCCA+GGG | 0.529235 | 5_4:+10200413 | None:intergenic |
| TGGTGGGCCTCGAGCTAAAG+TGG | 0.533968 | 5_4:-10200068 | Msa0836650:CDS |
| AATTAGTTATCATCATGGTT+GGG | 0.534493 | 5_4:-10199878 | Msa0836650:three_prime_UTR |
| ATATTAGTTGAAGGGTTGAT+CGG | 0.535066 | 5_4:-10202217 | Msa0836650:five_prime_UTR |
| ACGTGCCAATTCACAACTCA+AGG | 0.543571 | 5_4:+10200330 | None:intergenic |
| TTTGTTGAAGTCGTATCAGA+TGG | 0.544062 | 5_4:-10202159 | Msa0836650:CDS |
| CGACGGATGATGTGATATCA+TGG | 0.550146 | 5_4:-10202124 | Msa0836650:CDS |
| CATCAATCTATTGGTACGTG+TGG | 0.562918 | 5_4:-10202695 | Msa0836650:five_prime_UTR |
| AAAGAAACAATGCGAAGAGT+TGG | 0.565353 | 5_4:-10200305 | Msa0836650:CDS |
| GCTTCCAGGGGTTGTGACGA+CGG | 0.568930 | 5_4:+10200526 | None:intergenic |
| TTGTGACGACGGTTGTGAGA+TGG | 0.569926 | 5_4:+10200537 | None:intergenic |
| GACAACTCTCCATCAAACTC+CGG | 0.573360 | 5_4:-10200484 | Msa0836650:CDS |
| CCATCAAACTCCGGCAACGA+CGG | 0.576121 | 5_4:-10200475 | Msa0836650:CDS |
| GTTGTGAACATGATGAAAAG+TGG | 0.578148 | 5_4:-10200013 | Msa0836650:CDS |
| CCCAACAATAGAAACCAGAA+AGG | 0.597826 | 5_4:+10202393 | None:intergenic |
| TTGTTACCCACTTTAGCTCG+AGG | 0.613620 | 5_4:+10200061 | None:intergenic |
| GGCGTTTGATATCGGTGAGG+AGG | 0.622756 | 5_4:+10200566 | None:intergenic |
| GAATCTGTTCAAAATGCGGT+TGG | 0.630106 | 5_4:-10200208 | Msa0836650:CDS |
| GTGATATCATGGAGTGAGAG+TGG | 0.634834 | 5_4:-10202113 | Msa0836650:CDS |
| GAAGACCAATTGAGCTATGG+TGG | 0.636764 | 5_4:-10200085 | Msa0836650:CDS |
| CCAACCTTAATAAGTGACGT+TGG | 0.639053 | 5_4:+10202617 | None:intergenic |
| GGTGGGCCTCGAGCTAAAGT+GGG | 0.645793 | 5_4:-10200067 | Msa0836650:CDS |
| GTTGAAGTCGTATCAGATGG+TGG | 0.646028 | 5_4:-10202156 | Msa0836650:CDS |
| TGTGAAGACCAATTGAGCTA+TGG | 0.646584 | 5_4:-10200088 | Msa0836650:CDS |
| TTGTGAATCTGTTCAAAATG+CGG | 0.658508 | 5_4:-10200212 | Msa0836650:CDS |
| GCAAACGAAAATTTCAAACG+AGG | 0.682155 | 5_4:-10200598 | Msa0836650:CDS |
| TGCGGCGTTTGATATCGGTG+AGG | 0.683931 | 5_4:+10200563 | None:intergenic |
| AAGACCAATTGAGCTATGGT+GGG | 0.693450 | 5_4:-10200084 | Msa0836650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAATTATTTTTATTTTAA+TGG | - | chr5_4:10200764-10200783 | Msa0836650:intron | 0.0% |
| !! | GTAATAAAATAACAAAAATA+TGG | + | chr5_4:10199664-10199683 | None:intergenic | 10.0% |
| !!! | TTTTCTAAAAAAAAAAACAT+TGG | + | chr5_4:10200527-10200546 | None:intergenic | 10.0% |
| !!! | AATTATTTTTTAGCAATTTT+TGG | - | chr5_4:10200551-10200570 | Msa0836650:CDS | 10.0% |
| !!! | ATTATTTTTTAGCAATTTTT+GGG | - | chr5_4:10200552-10200571 | Msa0836650:CDS | 10.0% |
| !!! | TATTTTAACAAATAGTAAAT+AGG | + | chr5_4:10200924-10200943 | None:intergenic | 10.0% |
| !!! | TAGTTTTAAAAGTAATAATT+CGG | - | chr5_4:10201483-10201502 | Msa0836650:intron | 10.0% |
| !! | TAGAAAAATATATTAGTTGA+AGG | - | chr5_4:10200182-10200201 | Msa0836650:CDS | 15.0% |
| !! | AGAAAAATATATTAGTTGAA+GGG | - | chr5_4:10200183-10200202 | Msa0836650:CDS | 15.0% |
| !! | AATTATCTTAAACTAATCAA+AGG | + | chr5_4:10200496-10200515 | None:intergenic | 15.0% |
| !!! | TTATTTTTTAGCAATTTTTG+GGG | - | chr5_4:10200553-10200572 | Msa0836650:CDS | 15.0% |
| !!! | TGTTCAAATATTTTGATTTT+AGG | - | chr5_4:10200806-10200825 | Msa0836650:intron | 15.0% |
| !! | AATTATAATACACTTTCATA+GGG | + | chr5_4:10201226-10201245 | None:intergenic | 15.0% |
| !! | AAATTATAATACACTTTCAT+AGG | + | chr5_4:10201227-10201246 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr5_4:10201459-10201478 | Msa0836650:intron | 15.0% |
| !!! | TAAATTTTATATCTGAAATG+TGG | + | chr5_4:10202454-10202473 | None:intergenic | 15.0% |
| !!! | TTTTGATTTAATTGTAATCT+AGG | - | chr5_4:10202605-10202624 | Msa0836650:five_prime_UTR | 15.0% |
| !! | ATATACTAATAATCAATGTA+TGG | - | chr5_4:10202672-10202691 | Msa0836650:five_prime_UTR | 15.0% |
| !! | AATAACAAAAATATGGTTGT+TGG | + | chr5_4:10199657-10199676 | None:intergenic | 20.0% |
| !! | CACATCTAAGAAATTAATTT+GGG | + | chr5_4:10199929-10199948 | None:intergenic | 20.0% |
| !! | TTGTTGTGCTTAAAATATTT+AGG | + | chr5_4:10200370-10200389 | None:intergenic | 20.0% |
| !!! | AATGATTTACTTTTAGTGTT+CGG | - | chr5_4:10201324-10201343 | Msa0836650:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr5_4:10201426-10201445 | Msa0836650:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr5_4:10201469-10201488 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr5_4:10201546-10201565 | Msa0836650:intron | 20.0% |
| !! | TCTAAAAGACAATTTAAATG+TGG | - | chr5_4:10202133-10202152 | Msa0836650:CDS | 20.0% |
| !! | CTAAAAGACAATTTAAATGT+GGG | - | chr5_4:10202134-10202153 | Msa0836650:CDS | 20.0% |
| !! | TAATTGTAATCTAGGTAATA+TGG | - | chr5_4:10202613-10202632 | Msa0836650:five_prime_UTR | 20.0% |
| ! | CATATCTATCATCAATCTAT+TGG | - | chr5_4:10199704-10199723 | Msa0836650:three_prime_UTR | 25.0% |
| !! | AAAACTTTCCTATTTTCGTA+TGG | - | chr5_4:10199884-10199903 | Msa0836650:three_prime_UTR | 25.0% |
| !! | AAACTTTCCTATTTTCGTAT+GGG | - | chr5_4:10199885-10199904 | Msa0836650:three_prime_UTR | 25.0% |
| ! | CCACATCTAAGAAATTAATT+TGG | + | chr5_4:10199930-10199949 | None:intergenic | 25.0% |
| ! | CCAAATTAATTTCTTAGATG+TGG | - | chr5_4:10199927-10199946 | Msa0836650:three_prime_UTR | 25.0% |
| !! | GAATGAACTAAATTTTCTGA+AGG | + | chr5_4:10199986-10200005 | None:intergenic | 25.0% |
| ! | CTTCAAATAAAAATCTGTCT+AGG | + | chr5_4:10200083-10200102 | None:intergenic | 25.0% |
| ! | CATGTTCATGAAAAACTAAA+AGG | + | chr5_4:10200450-10200469 | None:intergenic | 25.0% |
| !! | CTACCAAGTAAATTCATTTT+CGG | + | chr5_4:10200989-10201008 | None:intergenic | 25.0% |
| !!! | TAGGTTTTATCTTAACACTT+TGG | - | chr5_4:10201710-10201729 | Msa0836650:intron | 25.0% |
| !! | AGAGATTGTTTGAAATTGTT+TGG | - | chr5_4:10202242-10202261 | Msa0836650:five_prime_UTR | 25.0% |
| ! | ACAGTAATTAGTTATCATCA+TGG | - | chr5_4:10202525-10202544 | Msa0836650:five_prime_UTR | 25.0% |
| ! | TAATTAGTTATCATCATGGT+TGG | - | chr5_4:10202529-10202548 | Msa0836650:five_prime_UTR | 25.0% |
| ! | AATTAGTTATCATCATGGTT+GGG | - | chr5_4:10202530-10202549 | Msa0836650:five_prime_UTR | 25.0% |
| CATTATTGACCAAATGAAAC+CGG | + | chr5_4:10199741-10199760 | None:intergenic | 30.0% | |
| TATTCTCCTTCAATGTCTTT+GGG | + | chr5_4:10199856-10199875 | None:intergenic | 30.0% | |
| ATATTCTCCTTCAATGTCTT+TGG | + | chr5_4:10199857-10199876 | None:intergenic | 30.0% | |
| ! | AACTTTCCTATTTTCGTATG+GGG | - | chr5_4:10199886-10199905 | Msa0836650:three_prime_UTR | 30.0% |
| ATAATTCCCCATACGAAAAT+AGG | + | chr5_4:10199895-10199914 | None:intergenic | 30.0% | |
| ! | ATATTAGTTGAAGGGTTGAT+CGG | - | chr5_4:10200191-10200210 | Msa0836650:CDS | 30.0% |
| TGATACGACTTCAACAAAAA+CGG | + | chr5_4:10200247-10200266 | None:intergenic | 30.0% | |
| TGAAAAACTAAAAGGAGAGA+GGG | + | chr5_4:10200442-10200461 | None:intergenic | 30.0% | |
| ATGAAAAACTAAAAGGAGAG+AGG | + | chr5_4:10200443-10200462 | None:intergenic | 30.0% | |
| !!! | AATTTTTGGGGTTCATAACA+AGG | - | chr5_4:10200565-10200584 | Msa0836650:CDS | 30.0% |
| CAATACTTTCCTTCCAATTA+GGG | + | chr5_4:10200896-10200915 | None:intergenic | 30.0% | |
| ACACCGAAAATGAATTTACT+TGG | - | chr5_4:10200983-10201002 | Msa0836650:intron | 30.0% | |
| TTGGTAGATCACAATGAATT+AGG | - | chr5_4:10201002-10201021 | Msa0836650:intron | 30.0% | |
| CACATCTTTACAATTATGCA+CGG | + | chr5_4:10201295-10201314 | None:intergenic | 30.0% | |
| !! | ATTTACTTTTAGTGTTCGGA+TGG | - | chr5_4:10201328-10201347 | Msa0836650:intron | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr5_4:10201377-10201396 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr5_4:10201378-10201397 | Msa0836650:intron | 30.0% |
| !! | AAGCGACATTCATTTTGAAA+TGG | - | chr5_4:10201576-10201595 | Msa0836650:intron | 30.0% |
| !!! | GACATTCATTTTGAAATGGA+GGG | - | chr5_4:10201616-10201635 | Msa0836650:intron | 30.0% |
| ! | AGTGTTCAATGGTTTACTTT+TGG | - | chr5_4:10201647-10201666 | Msa0836650:intron | 30.0% |
| GAAAACGTGCTAATATTTGA+GGG | + | chr5_4:10201685-10201704 | None:intergenic | 30.0% | |
| AGAAAACGTGCTAATATTTG+AGG | + | chr5_4:10201686-10201705 | None:intergenic | 30.0% | |
| ! | ATTAGCACGTTTTCTTTTCT+AGG | - | chr5_4:10201691-10201710 | Msa0836650:intron | 30.0% |
| TGAGAAAATGCTAATTACCA+TGG | - | chr5_4:10201736-10201755 | Msa0836650:intron | 30.0% | |
| TTTGCAAATTCCCATTTATC+TGG | + | chr5_4:10201795-10201814 | None:intergenic | 30.0% | |
| CTCGATAAGTTAACATATTG+AGG | + | chr5_4:10202026-10202045 | None:intergenic | 30.0% | |
| TTGTGAATCTGTTCAAAATG+CGG | - | chr5_4:10202196-10202215 | Msa0836650:exon | 30.0% | |
| !! | GTTTGAAATTGTTTGGTGTT+TGG | - | chr5_4:10202249-10202268 | Msa0836650:five_prime_UTR | 30.0% |
| GAAATAAGCAATAAGAAGAG+AGG | - | chr5_4:10202296-10202315 | Msa0836650:five_prime_UTR | 30.0% | |
| AGAACCAACGTCACTTATTA+AGG | - | chr5_4:10199787-10199806 | Msa0836650:three_prime_UTR | 35.0% | |
| TTAGATGTGGCTTAAGCTAA+TGG | - | chr5_4:10199940-10199959 | Msa0836650:three_prime_UTR | 35.0% | |
| !! | TCCTTTCTGGTTTCTATTGT+TGG | - | chr5_4:10200014-10200033 | Msa0836650:CDS | 35.0% |
| !! | CCTTTCTGGTTTCTATTGTT+GGG | - | chr5_4:10200015-10200034 | Msa0836650:CDS | 35.0% |
| TGGTTTCTATTGTTGGGATT+GGG | - | chr5_4:10200021-10200040 | Msa0836650:CDS | 35.0% | |
| TTTGTTGAAGTCGTATCAGA+TGG | - | chr5_4:10200249-10200268 | Msa0836650:CDS | 35.0% | |
| !!! | GAAACATGCTGATTTTGCAA+GGG | - | chr5_4:10200336-10200355 | Msa0836650:CDS | 35.0% |
| ! | GGTTTTCAATCTTTTCGTGT+AGG | + | chr5_4:10200855-10200874 | None:intergenic | 35.0% |
| ! | CCAATTAGGGTATTCTACTT+CGG | + | chr5_4:10200883-10200902 | None:intergenic | 35.0% |
| AGTAGAATACCCTAATTGGA+AGG | - | chr5_4:10200884-10200903 | Msa0836650:intron | 35.0% | |
| CCAATACTTTCCTTCCAATT+AGG | + | chr5_4:10200897-10200916 | None:intergenic | 35.0% | |
| ! | CCTAATTGGAAGGAAAGTAT+TGG | - | chr5_4:10200894-10200913 | Msa0836650:intron | 35.0% |
| GGACATCGACGTTAAAAAAT+TGG | + | chr5_4:10201274-10201293 | None:intergenic | 35.0% | |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr5_4:10201508-10201527 | Msa0836650:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr5_4:10201512-10201531 | Msa0836650:intron | 35.0% |
| !!! | CGACATTCATTTTGAAATGG+AGG | - | chr5_4:10201615-10201634 | Msa0836650:intron | 35.0% |
| !!! | GGGAGTATTTTAGTGTTCAA+TGG | - | chr5_4:10201636-10201655 | Msa0836650:intron | 35.0% |
| ! | ACCATGGTTTTTGAATTTGC+AGG | - | chr5_4:10201752-10201771 | Msa0836650:intron | 35.0% |
| ! | CCATGGTTTTTGAATTTGCA+GGG | - | chr5_4:10201753-10201772 | Msa0836650:intron | 35.0% |
| ATTTATCTGGCACAAGCTTT+CGG | + | chr5_4:10201782-10201801 | None:intergenic | 35.0% | |
| AAAGCTTGTGCCAGATAAAT+GGG | - | chr5_4:10201782-10201801 | Msa0836650:intron | 35.0% | |
| GCAAACGAAAATTTCAAACG+AGG | - | chr5_4:10201810-10201829 | Msa0836650:intron | 35.0% | |
| AAAGAAACAATGCGAAGAGT+TGG | - | chr5_4:10202103-10202122 | Msa0836650:CDS | 35.0% | |
| !! | ATTATGCGATCGATTTGATC+TGG | + | chr5_4:10202161-10202180 | None:intergenic | 35.0% |
| ! | GTTGGTGAAGTTGAAGAAAA+TGG | - | chr5_4:10202218-10202237 | Msa0836650:five_prime_UTR | 35.0% |
| GTTGTGAACATGATGAAAAG+TGG | - | chr5_4:10202395-10202414 | Msa0836650:five_prime_UTR | 35.0% | |
| CTTGAACACATGAAAGAAAC+AGG | + | chr5_4:10202576-10202595 | None:intergenic | 35.0% | |
| ! | GTTGTTGTTATCATGTTGTC+TGG | - | chr5_4:10202754-10202773 | Msa0836650:five_prime_UTR | 35.0% |
| TGTTATCATGTTGTCTGGTT+TGG | - | chr5_4:10202759-10202778 | Msa0836650:five_prime_UTR | 35.0% | |
| CATCAATCTATTGGTACGTG+TGG | - | chr5_4:10199713-10199732 | Msa0836650:three_prime_UTR | 40.0% | |
| CCAACCTTAATAAGTGACGT+TGG | + | chr5_4:10199794-10199813 | None:intergenic | 40.0% | |
| CCAACGTCACTTATTAAGGT+TGG | - | chr5_4:10199791-10199810 | Msa0836650:three_prime_UTR | 40.0% | |
| CATTCTCGTTTCTTCCTTTC+TGG | - | chr5_4:10200001-10200020 | Msa0836650:CDS | 40.0% | |
| CCCAACAATAGAAACCAGAA+AGG | + | chr5_4:10200018-10200037 | None:intergenic | 40.0% | |
| CTGGTTTCTATTGTTGGGAT+TGG | - | chr5_4:10200020-10200039 | Msa0836650:CDS | 40.0% | |
| !!! | GTGGTGAAAGTTTTGTTGTG+TGG | - | chr5_4:10200314-10200333 | Msa0836650:CDS | 40.0% |
| !!! | GGAAACATGCTGATTTTGCA+AGG | - | chr5_4:10200335-10200354 | Msa0836650:CDS | 40.0% |
| CCGAAGTAGAATACCCTAAT+TGG | - | chr5_4:10200880-10200899 | Msa0836650:intron | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+TGG | + | chr5_4:10201373-10201392 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr5_4:10201511-10201530 | Msa0836650:intron | 40.0% |
| CCCTGCAAATTCAAAAACCA+TGG | + | chr5_4:10201756-10201775 | None:intergenic | 40.0% | |
| GAAAGCTTGTGCCAGATAAA+TGG | - | chr5_4:10201781-10201800 | Msa0836650:intron | 40.0% | |
| !!! | GTTTTTTGAGTTGGAGGAAG+AGG | + | chr5_4:10201976-10201995 | None:intergenic | 40.0% |
| !!! | TGATCCAGGGTTTTTTGAGT+TGG | + | chr5_4:10201985-10202004 | None:intergenic | 40.0% |
| !! | TTGTTGTTTCCACTGATCCA+GGG | + | chr5_4:10201998-10202017 | None:intergenic | 40.0% |
| ! | CGAAACCTTGAGTTGTGAAT+TGG | - | chr5_4:10202073-10202092 | Msa0836650:CDS | 40.0% |
| GAATCTGTTCAAAATGCGGT+TGG | - | chr5_4:10202200-10202219 | Msa0836650:exon | 40.0% | |
| TGTGAAGACCAATTGAGCTA+TGG | - | chr5_4:10202320-10202339 | Msa0836650:five_prime_UTR | 40.0% | |
| AAGACCAATTGAGCTATGGT+GGG | - | chr5_4:10202324-10202343 | Msa0836650:five_prime_UTR | 40.0% | |
| ! | ATCTGAAATGTGGCAAGCTA+AGG | + | chr5_4:10202444-10202463 | None:intergenic | 40.0% |
| TCTATTGGTACGTGTGGAAC+CGG | - | chr5_4:10199719-10199738 | Msa0836650:three_prime_UTR | 45.0% | |
| ATCGGAGAAAAATGTCGCAG+CGG | - | chr5_4:10200209-10200228 | Msa0836650:CDS | 45.0% | |
| GTTGAAGTCGTATCAGATGG+TGG | - | chr5_4:10200252-10200271 | Msa0836650:CDS | 45.0% | |
| !!! | GATGGTGGATGATTTTGCGA+CGG | - | chr5_4:10200267-10200286 | Msa0836650:CDS | 45.0% |
| CGACGGATGATGTGATATCA+TGG | - | chr5_4:10200284-10200303 | Msa0836650:CDS | 45.0% | |
| GTGATATCATGGAGTGAGAG+TGG | - | chr5_4:10200295-10200314 | Msa0836650:CDS | 45.0% | |
| GGGTATTCTACTTCGGTAGA+AGG | + | chr5_4:10200876-10200895 | None:intergenic | 45.0% | |
| ! | GGTTTTGCGGCGTTTGATAT+CGG | + | chr5_4:10201853-10201872 | None:intergenic | 45.0% |
| !! | ACGGTTGTGAGATGGTTTTG+CGG | + | chr5_4:10201866-10201885 | None:intergenic | 45.0% |
| !!! | CTGGTTTTTTCAGCTTCCAG+GGG | + | chr5_4:10201897-10201916 | None:intergenic | 45.0% |
| !!! | GCTGGTTTTTTCAGCTTCCA+GGG | + | chr5_4:10201898-10201917 | None:intergenic | 45.0% |
| !!! | TGCTGGTTTTTTCAGCTTCC+AGG | + | chr5_4:10201899-10201918 | None:intergenic | 45.0% |
| TGGAGAGTTGTCATTGATGC+TGG | + | chr5_4:10201916-10201935 | None:intergenic | 45.0% | |
| GACAACTCTCCATCAAACTC+CGG | - | chr5_4:10201924-10201943 | Msa0836650:intron | 45.0% | |
| TCCTCCAACTCAAAAAACCC+TGG | - | chr5_4:10201978-10201997 | Msa0836650:intron | 45.0% | |
| !!! | TCCAGGGTTTTTTGAGTTGG+AGG | + | chr5_4:10201982-10202001 | None:intergenic | 45.0% |
| CTCAAAAAACCCTGGATCAG+TGG | - | chr5_4:10201986-10202005 | Msa0836650:intron | 45.0% | |
| !! | GTTGTTGTTTCCACTGATCC+AGG | + | chr5_4:10201999-10202018 | None:intergenic | 45.0% |
| ACGTGCCAATTCACAACTCA+AGG | + | chr5_4:10202081-10202100 | None:intergenic | 45.0% | |
| GAAGACCAATTGAGCTATGG+TGG | - | chr5_4:10202323-10202342 | Msa0836650:five_prime_UTR | 45.0% | |
| ! | TTGTTACCCACTTTAGCTCG+AGG | + | chr5_4:10202350-10202369 | None:intergenic | 45.0% |
| ! | CGTGTGGAACCGGTTTCATT+TGG | - | chr5_4:10199729-10199748 | Msa0836650:three_prime_UTR | 50.0% |
| GTCTCGCCCAAAGACATTGA+AGG | - | chr5_4:10199847-10199866 | Msa0836650:three_prime_UTR | 50.0% | |
| GAGAAAAATGTCGCAGCGGT+CGG | - | chr5_4:10200213-10200232 | Msa0836650:CDS | 50.0% | |
| GACTTCAACAAAAACGGCGC+CGG | + | chr5_4:10200241-10200260 | None:intergenic | 50.0% | |
| !! | TATCGGTGAGGAGGTGTTTG+TGG | + | chr5_4:10201836-10201855 | None:intergenic | 50.0% |
| TTGTGACGACGGTTGTGAGA+TGG | + | chr5_4:10201874-10201893 | None:intergenic | 50.0% | |
| ! | TGAGTTGGAGGAAGAGGTTG+AGG | + | chr5_4:10201970-10201989 | None:intergenic | 50.0% |
| GGCGTTTGATATCGGTGAGG+AGG | + | chr5_4:10201845-10201864 | None:intergenic | 55.0% | |
| TGCGGCGTTTGATATCGGTG+AGG | + | chr5_4:10201848-10201867 | None:intergenic | 55.0% | |
| CCATCAAACTCCGGCAACGA+CGG | - | chr5_4:10201933-10201952 | Msa0836650:intron | 55.0% | |
| GTTGGAGGAAGAGGTTGAGG+TGG | + | chr5_4:10201967-10201986 | None:intergenic | 55.0% | |
| GAGGCCCACCATAGCTCAAT+TGG | + | chr5_4:10202331-10202350 | None:intergenic | 55.0% | |
| ACAACCGTCGTCACAACCCC+TGG | - | chr5_4:10201878-10201897 | Msa0836650:intron | 60.0% | |
| GCTTCCAGGGGTTGTGACGA+CGG | + | chr5_4:10201885-10201904 | None:intergenic | 60.0% | |
| CCGTCGTTGCCGGAGTTTGA+TGG | + | chr5_4:10201936-10201955 | None:intergenic | 60.0% | |
| ! | TGGTGGGCCTCGAGCTAAAG+TGG | - | chr5_4:10202340-10202359 | Msa0836650:five_prime_UTR | 60.0% |
| GGTGGGCCTCGAGCTAAAGT+GGG | - | chr5_4:10202341-10202360 | Msa0836650:five_prime_UTR | 60.0% | |
| AACTCCGGCAACGACGGAGC+AGG | - | chr5_4:10201939-10201958 | Msa0836650:intron | 65.0% | |
| GGATCCTGCTCCGTCGTTGC+CGG | + | chr5_4:10201946-10201965 | None:intergenic | 65.0% | |
| AATGTCGCAGCGGTCGGCGC+CGG | - | chr5_4:10200219-10200238 | Msa0836650:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 10199648 | 10202782 | 10199648 | ID=Msa0836650;Name=Msa0836650 |
| chr5_4 | mRNA | 10199648 | 10202782 | 10199648 | ID=Msa0836650-mRNA-1;Parent=Msa0836650;Name=Msa0836650-mRNA-1;_AED=0.00;_eAED=0.00;_QI=572|1|1|1|1|1|2|349|287 |
| chr5_4 | exon | 10199648 | 10200656 | 10199648 | ID=Msa0836650-mRNA-1:exon:4509;Parent=Msa0836650-mRNA-1 |
| chr5_4 | exon | 10202007 | 10202782 | 10202007 | ID=Msa0836650-mRNA-1:exon:4508;Parent=Msa0836650-mRNA-1 |
| chr5_4 | five_prime_UTR | 10202211 | 10202782 | 10202211 | ID=Msa0836650-mRNA-1:five_prime_utr;Parent=Msa0836650-mRNA-1 |
| chr5_4 | CDS | 10202007 | 10202210 | 10202007 | ID=Msa0836650-mRNA-1:cds;Parent=Msa0836650-mRNA-1 |
| chr5_4 | CDS | 10199997 | 10200656 | 10199997 | ID=Msa0836650-mRNA-1:cds;Parent=Msa0836650-mRNA-1 |
| chr5_4 | three_prime_UTR | 10199648 | 10199996 | 10199648 | ID=Msa0836650-mRNA-1:three_prime_utr;Parent=Msa0836650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
