AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0563190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0563190 MtrunA17_Chr8g0377041 92.497 893 24 4 52 933 52 912 0.0 1617
Msa0563190 MtrunA17_Chr2g0300871 39.276 359 196 9 258 597 25 380 1.20e-60 220
Msa0563190 MtrunA17_Chr1g0192571 36.648 352 195 10 269 599 197 541 8.74e-60 215
Msa0563190 MtrunA17_Chr2g0277541 36.338 355 206 6 268 606 401 751 3.08e-58 218
Msa0563190 MtrunA17_Chr5g0409101 37.463 339 186 10 270 587 84 417 3.58e-54 201
Msa0563190 MtrunA17_Chr3g0108851 35.174 344 196 8 261 587 2 335 1.51e-49 189
Msa0563190 MtrunA17_Chr1g0192101 32.203 236 141 7 248 469 135 365 5.71e-26 115
Msa0563190 MtrunA17_Chr1g0192101 33.679 193 106 5 487 659 510 700 1.62e-21 100
Msa0563190 MtrunA17_Chr2g0330401 25.378 331 216 9 280 587 122 444 6.70e-16 81.6
Msa0563190 MtrunA17_Chr5g0409981 24.931 361 214 10 266 587 114 456 5.51e-15 79.0
Msa0563190 MtrunA17_Chr2g0293631 22.874 341 237 9 272 592 514 848 4.26e-14 77.0
Msa0563190 MtrunA17_Chr1g0200181 32.500 120 77 1 469 588 385 500 1.04e-12 72.0
Msa0563190 MtrunA17_Chr6g0449911 24.207 347 221 12 272 590 183 515 1.06e-12 72.0
Msa0563190 MtrunA17_Chr3g0107851 24.277 346 221 11 280 593 143 479 1.17e-12 71.6
Msa0563190 MtrunA17_Chr4g0076491 22.251 382 241 13 265 599 296 668 1.48e-12 71.6
Msa0563190 MtrunA17_Chr2g0297261 29.231 130 90 1 483 610 272 401 1.63e-12 70.5
Msa0563190 MtrunA17_Chr6g0461751 24.044 366 217 14 265 590 149 493 5.03e-12 69.7
Msa0563190 MtrunA17_Chr7g0263771 24.561 456 287 17 198 616 69 504 1.07e-11 68.9
Msa0563190 MtrunA17_Chr1g0157691 30.833 120 79 1 469 588 387 502 2.24e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0563190 AT1G27880.1 52.133 961 375 15 3 933 1 906 0.0 899
Msa0563190 AT1G27880.2 51.444 900 352 15 3 872 1 845 0.0 800
Msa0563190 AT4G35740.1 36.211 417 221 12 258 634 19 430 1.60e-61 223
Msa0563190 AT3G05740.2 34.060 367 213 9 252 599 103 459 5.62e-58 208
Msa0563190 AT1G31360.8 38.053 339 184 8 270 587 84 417 1.07e-57 207
Msa0563190 AT1G31360.4 38.053 339 184 8 270 587 84 417 1.07e-57 207
Msa0563190 AT1G10930.1 36.517 356 204 7 268 606 446 796 1.73e-57 216
Msa0563190 AT1G31360.7 38.053 339 184 8 270 587 84 417 2.04e-57 207
Msa0563190 AT1G31360.5 38.053 339 184 8 270 587 84 417 4.44e-57 207
Msa0563190 AT3G05740.1 34.060 367 213 9 252 599 188 544 5.27e-57 207
Msa0563190 AT1G31360.6 38.053 339 184 8 270 587 84 417 1.11e-56 207
Msa0563190 AT1G31360.1 38.053 339 184 8 270 587 84 417 1.64e-56 208
Msa0563190 AT1G31360.3 38.053 339 184 8 270 587 118 451 2.63e-56 208
Msa0563190 AT1G31360.2 37.710 297 159 8 312 587 1 292 7.26e-44 169
Msa0563190 AT4G35740.2 32.537 335 182 11 339 634 8 337 1.09e-36 147
Msa0563190 AT5G27680.5 31.897 232 135 7 266 482 29 252 3.72e-26 115
Msa0563190 AT5G27680.5 34.737 190 102 5 487 655 371 559 3.28e-21 100
Msa0563190 AT5G27680.6 31.897 232 135 7 266 482 159 382 4.85e-26 115
Msa0563190 AT5G27680.1 31.897 232 135 7 266 482 159 382 5.34e-26 115
Msa0563190 AT5G27680.1 34.737 190 102 5 487 655 501 689 3.84e-21 100
Msa0563190 AT5G27680.4 31.897 232 135 7 266 482 159 382 5.34e-26 115
Msa0563190 AT5G27680.4 34.737 190 102 5 487 655 501 689 3.84e-21 100
Msa0563190 AT5G27680.3 31.897 232 135 7 266 482 159 382 5.34e-26 115
Msa0563190 AT5G27680.3 34.737 190 102 5 487 655 501 689 3.84e-21 100
Msa0563190 AT5G27680.2 31.897 232 135 7 266 482 159 382 5.34e-26 115
Msa0563190 AT5G27680.2 34.737 190 102 5 487 655 501 689 3.84e-21 100
Msa0563190 AT1G55150.1 26.269 335 208 10 280 587 126 448 8.72e-15 78.6
Msa0563190 AT4G33370.1 23.304 339 221 9 280 588 124 453 1.44e-14 78.2
Msa0563190 AT1G55150.2 26.606 327 201 10 288 587 159 473 1.68e-14 77.8
Msa0563190 AT3G01540.1 23.121 346 232 10 269 590 174 509 5.24e-14 76.6
Msa0563190 AT3G01540.4 23.121 346 232 10 269 590 174 509 5.97e-14 76.6
Msa0563190 AT3G01540.2 23.121 346 232 10 269 590 174 509 5.97e-14 76.6
Msa0563190 AT3G01540.3 23.121 346 232 10 269 590 174 509 5.97e-14 76.6
Msa0563190 AT1G31970.1 25.326 383 229 12 245 587 105 470 1.02e-13 75.5
Msa0563190 AT5G63120.2 22.807 342 227 10 272 587 184 514 2.24e-13 74.7
Msa0563190 AT5G14610.6 24.167 360 221 14 265 590 171 512 5.43e-13 73.6
Msa0563190 AT5G14610.2 24.167 360 221 14 265 590 171 512 6.09e-13 73.2
Msa0563190 AT5G14610.5 24.167 360 221 14 265 590 179 520 7.23e-13 73.2
Msa0563190 AT5G14610.1 24.217 351 216 13 272 590 248 580 1.57e-12 72.0
Msa0563190 AT5G14610.7 35.238 105 67 1 486 590 278 381 2.30e-12 71.2
Msa0563190 AT5G14610.3 35.238 105 67 1 486 590 278 381 2.30e-12 71.2
Msa0563190 AT3G19760.1 30.769 130 88 1 483 610 274 403 2.62e-12 70.5
Msa0563190 AT2G33730.1 31.092 119 79 1 484 599 577 695 6.13e-12 70.1
Msa0563190 AT5G51280.1 33.010 103 69 0 486 588 400 502 6.49e-12 69.7
Msa0563190 AT1G28180.1 29.661 118 79 2 484 597 218 335 9.17e-11 65.1

Find 226 sgRNAs with CRISPR-Local

Find 564 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATCATTCATTATTGTATA+TGG 0.189476 4_1:-63495639 None:intergenic
GAGTAAGGGTTTACGAATTT+TGG 0.198750 4_1:-63488054 None:intergenic
TCTTGTTCGGGAAGAATTTC+GGG 0.200727 4_1:-63487897 None:intergenic
CAATTGCCTCCGCTCATTTC+GGG 0.221496 4_1:+63488728 Msa0563190:CDS
ATGCTTGCAAAGGATAATAT+TGG 0.238086 4_1:+63494289 Msa0563190:CDS
TTCTTGTTCGGGAAGAATTT+CGG 0.239846 4_1:-63487898 None:intergenic
TAAGGGACTTGGTGCAAATT+TGG 0.255460 4_1:-63495294 None:intergenic
CAGCCTACCCTTATACAATA+TGG 0.255516 4_1:+63494819 Msa0563190:CDS
CAGCAATAGCAGAAACCTTT+TGG 0.258260 4_1:-63492208 None:intergenic
ACATCTCATCATCATAAAAT+AGG 0.269389 4_1:-63490997 None:intergenic
GTATACCAAGATAGACTTTA+AGG 0.273733 4_1:+63495190 Msa0563190:CDS
CATAGTATACTGCAAATTTC+AGG 0.277071 4_1:+63489713 Msa0563190:CDS
GAAAATTTGGTAGTGGTAAA+AGG 0.277686 4_1:+63488282 Msa0563190:CDS
CCGATAGTCAAGGCACTAAA+AGG 0.286757 4_1:+63488179 Msa0563190:CDS
TGAAGCTTCTGATGAGAATT+TGG 0.290524 4_1:+63488496 Msa0563190:CDS
TTTGGAGAATGAAATTGATT+TGG 0.292930 4_1:-63488036 None:intergenic
ATAATATTGGATTACTTTGC+TGG 0.294888 4_1:+63494302 Msa0563190:CDS
ACAATTGCCTCCGCTCATTT+CGG 0.302918 4_1:+63488727 Msa0563190:CDS
TCGACTAATCCAAACCTTTA+GGG 0.310744 4_1:-63492621 None:intergenic
TATGGGGTAAAACCCATTTC+TGG 0.313223 4_1:+63494837 Msa0563190:CDS
AACTGATTTGTTAATTCAAC+TGG 0.319696 4_1:-63492593 None:intergenic
GGCCTACTGTTATAGGATTC+TGG 0.324072 4_1:+63493698 Msa0563190:CDS
ACACTAGCACCTATCAAATT+AGG 0.325281 4_1:-63488149 None:intergenic
AGGACATGGCCTACTGTTAT+AGG 0.330949 4_1:+63493691 Msa0563190:CDS
AACAGCCTCTTGTGTAAAAC+AGG 0.332338 4_1:-63493394 None:intergenic
TTATTCTAAATGCGCACTTA+AGG 0.353628 4_1:+63489505 Msa0563190:CDS
TGTGCAAAACAGTTAGTATA+AGG 0.357396 4_1:+63495737 Msa0563190:three_prime_UTR
CAATGCACAGATGTCTTTAC+TGG 0.362390 4_1:-63495317 None:intergenic
GGCTGTGTCCCTTGCCCAAA+AGG 0.373276 4_1:+63492193 Msa0563190:CDS
AATCATTCATTATTGTATAT+GGG 0.376821 4_1:-63495638 None:intergenic
CATTGATTGAAGGTGGGGCG+GGG 0.382722 4_1:+63495335 Msa0563190:three_prime_UTR
TTTGGTGGTGATGGTGAACT+TGG 0.383259 4_1:-63487795 None:intergenic
ACATACTCTTCCAGACTTCC+AGG 0.383363 4_1:-63490840 None:intergenic
AGGGGTAACCTTGGCGCAAC+TGG 0.387514 4_1:-63493464 None:intergenic
TATTCTAAATGCGCACTTAA+GGG 0.388305 4_1:+63489506 Msa0563190:CDS
GGAAGTTTCTAGATTGAGTA+AGG 0.388344 4_1:-63488069 None:intergenic
GGGTTTAGGAAGGGGTTTAT+TGG 0.388852 4_1:-63487874 None:intergenic
TTACACAAGAGGCTGTTTCC+AGG 0.394181 4_1:+63493400 Msa0563190:CDS
AAGGGGAAAGATTCTTGTTC+GGG 0.395512 4_1:-63487909 None:intergenic
CATTATATGTGCGACCTAGA+TGG 0.396685 4_1:+63495482 Msa0563190:three_prime_UTR
TTACAGTTTACCTGGAAGTC+TGG 0.398808 4_1:+63490830 Msa0563190:CDS
TACGCTTGTTGTTAGTCCTT+TGG 0.400050 4_1:+63488679 Msa0563190:CDS
GGTGAACTTGGTTGTTGTCT+TGG 0.401617 4_1:-63487783 None:intergenic
GCGATTAAGAATGTGCTTGC+TGG 0.402170 4_1:+63488575 Msa0563190:CDS
GAAACTGGAAGAGGTGGTTT+TGG 0.407007 4_1:-63487813 None:intergenic
AAGAAACATCCTAATTTGAT+AGG 0.411502 4_1:+63488140 Msa0563190:CDS
GCATTGATTGAAGGTGGGGC+GGG 0.412840 4_1:+63495334 Msa0563190:three_prime_UTR
AATATCCAGGGCAGACATAA+TGG 0.413104 4_1:-63489469 None:intergenic
GAGTGAGAAGATGAAGTTGA+AGG 0.417070 4_1:-63487984 None:intergenic
AAATCAGTTGTATGCCCTAA+AGG 0.419124 4_1:+63492607 Msa0563190:CDS
GTTGTTGCAACTGTGGCATT+TGG 0.419325 4_1:+63490352 Msa0563190:CDS
TTCTGTCTGTTATCTCTGGT+GGG 0.425312 4_1:+63489163 Msa0563190:CDS
TTGTGAAATTGAATTTGAAC+GGG 0.425322 4_1:+63488219 Msa0563190:CDS
GAATTTCTGTCTGTTATCTC+TGG 0.426044 4_1:+63489159 Msa0563190:CDS
AGCCTACCCTTATACAATAT+GGG 0.426403 4_1:+63494820 Msa0563190:CDS
TTTCCTGCGGGCAGATATAA+AGG 0.426465 4_1:+63494617 Msa0563190:CDS
GCTTCGTCAAGGCACAATAA+AGG 0.426914 4_1:+63488892 Msa0563190:CDS
ATCAGAAGTTGAAAGTTGTA+AGG 0.431899 4_1:+63493770 Msa0563190:CDS
GTGAGGGGATGGAAGGGAAG+GGG 0.436156 4_1:-63487926 None:intergenic
TTTCACAAAATTTCCTTCTC+CGG 0.436617 4_1:-63488204 None:intergenic
TTTCTGTCTGTTATCTCTGG+TGG 0.437888 4_1:+63489162 Msa0563190:CDS
AGAAACTTCCGAAGCTGAAC+CGG 0.438274 4_1:+63488082 Msa0563190:CDS
AACTAATCCCTCAGGTCAAA+AGG 0.442552 4_1:+63495567 Msa0563190:three_prime_UTR
CCCATGTCATTTGCCACAGT+TGG 0.444192 4_1:-63492563 None:intergenic
TGATGAGGAGGAGGATGGTA+TGG 0.445277 4_1:+63488385 Msa0563190:CDS
AAGTGAGGGGATGGAAGGGA+AGG 0.445403 4_1:-63487928 None:intergenic
GTCTTTACTGGTAAGGGACT+TGG 0.445506 4_1:-63495305 None:intergenic
CATATTGTATAAGGGTAGGC+TGG 0.448678 4_1:-63494818 None:intergenic
AAGTTGTTGAAATTGATTCA+TGG 0.451160 4_1:+63488521 Msa0563190:CDS
AAGGTCACGGGTTCAAGTCC+TGG 0.451424 4_1:-63493418 None:intergenic
ATCATAAAATAGGTGACAAT+AGG 0.453000 4_1:-63490987 None:intergenic
GGACAACCTCCCATCCCTTC+CGG 0.453112 4_1:-63490966 None:intergenic
ATCAACAACCGGTTCAGCTT+CGG 0.454617 4_1:-63488090 None:intergenic
TAGAAGTAAACGTATAAAAT+CGG 0.456701 4_1:+63488337 Msa0563190:CDS
GGACTAGATAAAAGAGATGT+TGG 0.458565 4_1:+63490379 Msa0563190:CDS
CACCACCTTAAAGTCTATCT+TGG 0.460065 4_1:-63495195 None:intergenic
CTCTGCCTGTCTGTTACTCC+AGG 0.462982 4_1:+63495423 Msa0563190:three_prime_UTR
GGCTACGTACAGGAGTTGTT+TGG 0.463664 4_1:+63490187 Msa0563190:CDS
CTCTTGTGTAAAACAGGGTA+AGG 0.466337 4_1:-63493388 None:intergenic
GAAGGGGAAAGATTCTTGTT+CGG 0.466450 4_1:-63487910 None:intergenic
TGTAGAGAATGCAAAGCAAC+AGG 0.467238 4_1:+63488409 Msa0563190:CDS
ATAGGACGTGCCGGAAGGGA+TGG 0.469051 4_1:+63490956 Msa0563190:CDS
CACAGATGTCTTTACTGGTA+AGG 0.469053 4_1:-63495312 None:intergenic
GTTCGTTGTCGGATGTTGAA+AGG 0.469108 4_1:-63487951 None:intergenic
AATTGATTTGGAGAAGAATC+CGG 0.470308 4_1:-63488024 None:intergenic
AATAGTAATGGCAGCAATAG+TGG 0.470939 4_1:+63488314 Msa0563190:CDS
TGCAACTGTGGCATTTGGCA+TGG 0.471083 4_1:+63490357 Msa0563190:CDS
AATTGAATTTGAACGGGAAG+AGG 0.476113 4_1:+63488225 Msa0563190:CDS
AAAGGAAGTGAGGGGATGGA+AGG 0.478336 4_1:-63487933 None:intergenic
CGCTCTTCTAAGCAGTGCTC+AGG 0.478699 4_1:+63488751 Msa0563190:CDS
AGTGAGGGGATGGAAGGGAA+GGG 0.479047 4_1:-63487927 None:intergenic
AGAAATAACTTATGAAATGA+AGG 0.481059 4_1:+63493671 Msa0563190:CDS
CTTCATAAGAGTCTTAATGT+AGG 0.487345 4_1:+63489399 Msa0563190:CDS
ATTACCCTCGCAACAGCTCT+TGG 0.487754 4_1:-63494779 None:intergenic
TCTTCATTCAAGAATCGCTC+TGG 0.488566 4_1:-63489138 None:intergenic
AAGGAAGTGAGGGGATGGAA+GGG 0.488949 4_1:-63487932 None:intergenic
TTTGTGAAATTGAATTTGAA+CGG 0.491350 4_1:+63488218 Msa0563190:CDS
ATATCAAACCTGCGTGAAGC+AGG 0.492622 4_1:-63491232 None:intergenic
GAATGGGCATTGTAGGAGAT+AGG 0.495642 4_1:+63490938 Msa0563190:intron
TAGGACGTGCCGGAAGGGAT+GGG 0.496615 4_1:+63490957 Msa0563190:CDS
TCCCTCAGGTCAAAAGGAAA+AGG 0.497113 4_1:+63495573 Msa0563190:three_prime_UTR
ATTGATTGAAGGTGGGGCGG+GGG 0.498392 4_1:+63495336 Msa0563190:three_prime_UTR
GCAACTGTGGCATTTGGCAT+GGG 0.498488 4_1:+63490358 Msa0563190:CDS
CGATTAAGAATGTGCTTGCT+GGG 0.501188 4_1:+63488576 Msa0563190:CDS
GAGCGTCAGACGTTCGTTGT+CGG 0.501622 4_1:-63487962 None:intergenic
AGATGCCATTATGTCTGCCC+TGG 0.503557 4_1:+63489464 Msa0563190:CDS
GATCGGAGAAGAAGAACAAA+GGG 0.512824 4_1:-63487700 None:intergenic
AGAAGAAGAACAAAGGGAAA+TGG 0.513434 4_1:-63487694 None:intergenic
AACAGGAAAAGAAGAATGGT+TGG 0.514174 4_1:+63488426 Msa0563190:CDS
TCCAACTGTGGCAAATGACA+TGG 0.515681 4_1:+63492562 Msa0563190:CDS
GCACTAAAAGGCGCCGGAGA+AGG 0.515717 4_1:+63488191 Msa0563190:CDS
GTTGAAAGGAAGTGAGGGGA+TGG 0.516695 4_1:-63487937 None:intergenic
ATCCTTGATTCCTTCCATCT+AGG 0.520433 4_1:-63495496 None:intergenic
GGTGGTGATGGAAGCAGCTA+AGG 0.525244 4_1:+63495211 Msa0563190:CDS
GATAGACTTTAAGGTGGTGA+TGG 0.527217 4_1:+63495199 Msa0563190:CDS
GCAAGAAAATTGATCAAAGC+AGG 0.527941 4_1:+63494345 Msa0563190:CDS
TGCATTGATTGAAGGTGGGG+CGG 0.528493 4_1:+63495333 Msa0563190:three_prime_UTR
GAACTTGGTTGTTGTCTTGG+CGG 0.531364 4_1:-63487780 None:intergenic
ATCATTCATTATTGTATATG+GGG 0.531507 4_1:-63495637 None:intergenic
GTTGTAGAAACTAATCCCTC+AGG 0.534801 4_1:+63495559 Msa0563190:three_prime_UTR
AGATCCGTCGGAATCTGAAT+CGG 0.534893 4_1:-63487742 None:intergenic
GGAGAAGAATCCGGCAGGGA+GGG 0.536997 4_1:-63488015 None:intergenic
CGGATGTTGAAAGGAAGTGA+GGG 0.537562 4_1:-63487942 None:intergenic
CTATTGCTGTGATTCTGAAA+AGG 0.538068 4_1:+63492222 Msa0563190:CDS
TTGTTTGAAACTGGAAGAGG+TGG 0.539207 4_1:-63487819 None:intergenic
ACAGGAAAAGAAGAATGGTT+GGG 0.539988 4_1:+63488427 Msa0563190:CDS
CCTGCTGACAAAAGCTCCTG+TGG 0.542681 4_1:+63491184 Msa0563190:CDS
TCATAGTGGTATTTCTGCAA+AGG 0.548833 4_1:+63490159 Msa0563190:CDS
GACCTAGATGGAAGGAATCA+AGG 0.549875 4_1:+63495494 Msa0563190:three_prime_UTR
GATTTGTGCAAGGAATATCC+AGG 0.550259 4_1:-63489482 None:intergenic
TTATTGTGCCTTGACGAAGC+TGG 0.551129 4_1:-63488889 None:intergenic
GTAATTCATTACAGTTTACC+TGG 0.551307 4_1:+63490822 Msa0563190:CDS
AAATGAATGCAAAGTGTTGG+AGG 0.552542 4_1:+63488451 Msa0563190:CDS
AAAGGAACGTGGCTACGTAC+AGG 0.554701 4_1:+63490177 Msa0563190:CDS
AACTTCGTAGTCTAATGTAC+AGG 0.555989 4_1:+63491026 Msa0563190:CDS
TCTAGGTCGCACATATAATG+AGG 0.557415 4_1:-63495479 None:intergenic
TCGGATGTTGAAAGGAAGTG+AGG 0.557472 4_1:-63487943 None:intergenic
GATGATGATGAGGAGGAGGA+TGG 0.557550 4_1:+63488380 Msa0563190:CDS
GACATCTGTGCATTGATTGA+AGG 0.562300 4_1:+63495325 Msa0563190:three_prime_UTR
CTTGGTGCAAATTTGGCAGA+TGG 0.562715 4_1:-63495287 None:intergenic
ATATTGTATAAGGGTAGGCT+GGG 0.562876 4_1:-63494817 None:intergenic
GTCAAGGCACTAAAAGGCGC+CGG 0.563462 4_1:+63488185 Msa0563190:CDS
ATCATTTAGAGTTATCATAG+TGG 0.565678 4_1:+63490145 Msa0563190:intron
AAGCAACAGGAAAAGAAGAA+TGG 0.566070 4_1:+63488422 Msa0563190:CDS
GATGAGGAGGAGGATGGTAT+GGG 0.566294 4_1:+63488386 Msa0563190:CDS
CATATGCAGTCGTTTCCTGC+GGG 0.566507 4_1:+63494605 Msa0563190:intron
ATAAAATCGGAACACAAAGA+AGG 0.567266 4_1:+63488350 Msa0563190:CDS
TGAAGAAATGTGAGATCCGT+CGG 0.567715 4_1:-63487754 None:intergenic
TTTGAATGATAACAACATCA+AGG 0.569180 4_1:+63490030 Msa0563190:CDS
CTGGAGTAACAGACAGGCAG+AGG 0.569458 4_1:-63495422 None:intergenic
GGAAAATGAATGCAAAGTGT+TGG 0.569609 4_1:+63488448 Msa0563190:CDS
TCTATCGAAACCCTCCCTGC+CGG 0.570984 4_1:+63488005 Msa0563190:CDS
GGATCGGAGAAGAAGAACAA+AGG 0.573245 4_1:-63487701 None:intergenic
GCTCTGAGTCTCATGAATGA+AGG 0.573682 4_1:-63489369 None:intergenic
ATCAATAACAACAAGTGAGA+CGG 0.574473 4_1:-63489190 None:intergenic
ACCCCATATTGTATAAGGGT+AGG 0.574497 4_1:-63494822 None:intergenic
GATTTGGAGAAGAATCCGGC+AGG 0.580592 4_1:-63488020 None:intergenic
TTCAGATCTGAAAATAAGCA+CGG 0.583131 4_1:+63492521 Msa0563190:intron
CATAATGGCATCTAAAGTCA+TGG 0.585243 4_1:-63489454 None:intergenic
CTTGTTCGGGAAGAATTTCG+GGG 0.585854 4_1:-63487896 None:intergenic
CAACTTTACCAGTTGCGCCA+AGG 0.585916 4_1:+63493456 Msa0563190:CDS
ACAGATGTCTTTACTGGTAA+GGG 0.586297 4_1:-63495311 None:intergenic
GGAGATAGGACGTGCCGGAA+GGG 0.586499 4_1:+63490952 Msa0563190:intron
TGTGGTAACGCCGATAGTCA+AGG 0.586656 4_1:+63488169 Msa0563190:CDS
AAGCTGGTTGAGTGTTTCAG+AGG 0.587339 4_1:-63488873 None:intergenic
AAGTCTGGAAGAGTATGTAC+AGG 0.589387 4_1:+63490845 Msa0563190:CDS
CCAACTGTGGCAAATGACAT+GGG 0.590683 4_1:+63492563 Msa0563190:CDS
GAAGTTTCTAGATTGAGTAA+GGG 0.593349 4_1:-63488068 None:intergenic
CTGCTGACAAAAGCTCCTGT+GGG 0.597436 4_1:+63491185 Msa0563190:CDS
ATCACACTTCATGCTTGCAA+AGG 0.600346 4_1:+63494279 Msa0563190:CDS
TCATGTGACTGAAAGGTCAC+GGG 0.600522 4_1:-63493430 None:intergenic
AAGCACATTGTATATCTGAA+TGG 0.600670 4_1:+63489214 Msa0563190:CDS
TGATAACAACATCAAGGCAA+AGG 0.601528 4_1:+63490036 Msa0563190:CDS
TTGTAGGAGATAGGACGTGC+CGG 0.602571 4_1:+63490947 Msa0563190:intron
AGGAGATAGGACGTGCCGGA+AGG 0.602725 4_1:+63490951 Msa0563190:intron
GACGTGCCGGAAGGGATGGG+AGG 0.603769 4_1:+63490960 Msa0563190:CDS
TAATTTGATAGGTGCTAGTG+TGG 0.604367 4_1:+63488151 Msa0563190:CDS
GTCATGTGACTGAAAGGTCA+CGG 0.605109 4_1:-63493431 None:intergenic
TTACACCAAGAGCTGTTGCG+AGG 0.607759 4_1:+63494774 Msa0563190:CDS
TTTAGAATAAGATTTGTGCA+AGG 0.610553 4_1:-63489492 None:intergenic
TATGAAGGTTGTTGCAACTG+TGG 0.610759 4_1:+63490345 Msa0563190:intron
TACACCAAGAGCTGTTGCGA+GGG 0.610987 4_1:+63494775 Msa0563190:CDS
AATCTATGTGATAAGATGAA+CGG 0.611074 4_1:+63494242 Msa0563190:CDS
GCCTACCCTTATACAATATG+GGG 0.613022 4_1:+63494821 Msa0563190:CDS
TGAGTCTCATGAATGAAGGT+CGG 0.613163 4_1:-63489365 None:intergenic
ATCTGTGCATTGATTGAAGG+TGG 0.614434 4_1:+63495328 Msa0563190:three_prime_UTR
CTTGACCTGGAGTAACAGAC+AGG 0.614454 4_1:-63495428 None:intergenic
TCTGTGCATTGATTGAAGGT+GGG 0.615355 4_1:+63495329 Msa0563190:three_prime_UTR
TCAAAGAACCTGCTTCACGC+AGG 0.615491 4_1:+63491224 Msa0563190:CDS
GTTGTTGTCATGTGACTGAA+AGG 0.616439 4_1:-63493437 None:intergenic
AGAAGAACAAAGGGAAATGG+TGG 0.618087 4_1:-63487691 None:intergenic
CAGGTTTGATATGAAAGAAG+AGG 0.626887 4_1:+63491243 Msa0563190:CDS
ACATATGCAGTCGTTTCCTG+CGG 0.627745 4_1:+63494604 Msa0563190:intron
CAACTGTGGCAAATGACATG+GGG 0.630786 4_1:+63492564 Msa0563190:CDS
TCACCTTTATATCTGCCCGC+AGG 0.632718 4_1:-63494620 None:intergenic
ACATGGCGCGAAACAACTGC+AGG 0.634740 4_1:-63495376 None:intergenic
TCAATCATCAAAGCTACCAA+AGG 0.636069 4_1:-63488695 None:intergenic
ACACTCAACCAGCTTCGTCA+AGG 0.636248 4_1:+63488881 Msa0563190:CDS
GAGTAACAGACAGGCAGAGG+CGG 0.636604 4_1:-63495419 None:intergenic
AGAAGAGCGCCCGAAATGAG+CGG 0.636804 4_1:-63488737 None:intergenic
CTAGGTCGCACATATAATGA+GGG 0.638576 4_1:-63495478 None:intergenic
TTGTTCGGGAAGAATTTCGG+GGG 0.638881 4_1:-63487895 None:intergenic
GGTATTTCTGCAAAGGAACG+TGG 0.641724 4_1:+63490166 Msa0563190:CDS
ATATGTGCGACCTAGATGGA+AGG 0.643950 4_1:+63495486 Msa0563190:three_prime_UTR
AACTTATGAAATGAAGGACA+TGG 0.644073 4_1:+63493677 Msa0563190:CDS
AGGGATTAGTTTCTACAACA+AGG 0.644393 4_1:-63495555 None:intergenic
ACACACGTTGCATTTGTCTG+TGG 0.649253 4_1:-63491912 None:intergenic
CTGTGCATTGATTGAAGGTG+GGG 0.649957 4_1:+63495330 Msa0563190:three_prime_UTR
TTCCAGAATCCTATAACAGT+AGG 0.656135 4_1:-63493700 None:intergenic
AGCGACTTCCCAGCACCCGT+CGG 0.662358 4_1:-63488620 None:intergenic
CTAACAACAAGCGTAATCCC+AGG 0.664152 4_1:-63488671 None:intergenic
ATTTGGAGAAGAATCCGGCA+GGG 0.667823 4_1:-63488019 None:intergenic
ATTTGTGCAAGGAATATCCA+GGG 0.675764 4_1:-63489481 None:intergenic
TGGAGAAGAATCCGGCAGGG+AGG 0.677448 4_1:-63488016 None:intergenic
AGAGCGCCCGAAATGAGCGG+AGG 0.689601 4_1:-63488734 None:intergenic
GCTGTTGCGAGGGTAATGCA+CGG 0.692274 4_1:+63494785 Msa0563190:CDS
AACTGTGGCAAATGACATGG+GGG 0.692492 4_1:+63492565 Msa0563190:CDS
GATTCCGATTCAGATTCCGA+CGG 0.695299 4_1:+63487738 Msa0563190:CDS
AATTTCAACAGTGAATAACA+TGG 0.699307 4_1:-63495393 None:intergenic
TGAATGCAAAGTGTTGGAGG+AGG 0.703820 4_1:+63488454 Msa0563190:CDS
TACCAAGATAGACTTTAAGG+TGG 0.711526 4_1:+63495193 Msa0563190:CDS
GGATGTTGAAAGGAAGTGAG+GGG 0.717854 4_1:-63487941 None:intergenic
TGTTCGGGAAGAATTTCGGG+GGG 0.722900 4_1:-63487894 None:intergenic
ACAGCCTCTTGTGTAAAACA+GGG 0.731493 4_1:-63493393 None:intergenic
TGGTTCAAACAAGATCAGAG+TGG 0.733769 4_1:+63490207 Msa0563190:CDS
TATCAGCAGATATTACACGA+TGG 0.752851 4_1:+63493745 Msa0563190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATCTATATTTATATATATG+TGG + chr4_1:63489946-63489965 Msa0563190:intron 10.0%
!! ATCTATATTTATATATATGT+GGG + chr4_1:63489947-63489966 Msa0563190:intron 10.0%
!!! TTTTTCTTATTAAATAGAAT+GGG + chr4_1:63490922-63490941 Msa0563190:intron 10.0%
!! TAAACATATATTAAATTTCT+TGG + chr4_1:63492251-63492270 Msa0563190:intron 10.0%
!!! GTTTAATTTGAAAATTTTAA+GGG - chr4_1:63492897-63492916 None:intergenic 10.0%
!!! AGTTTAATTTGAAAATTTTA+AGG - chr4_1:63492898-63492917 None:intergenic 10.0%
!!! TATATGATCTTAAATTTTTT+TGG + chr4_1:63494444-63494463 Msa0563190:intron 10.0%
!!! ATATGATCTTAAATTTTTTT+GGG + chr4_1:63494445-63494464 Msa0563190:intron 10.0%
!!! ATTCTACTTTTTTTTTTTTA+GGG + chr4_1:63495658-63495677 Msa0563190:three_prime_UTR 10.0%
!!! TTATATTTTGAAATTCTTAC+AGG + chr4_1:63489331-63489350 Msa0563190:intron 15.0%
!!! ATTTTTCAATTTTAAGGTAT+TGG + chr4_1:63489752-63489771 Msa0563190:intron 15.0%
!!! TTTTTCAATTTTAAGGTATT+GGG + chr4_1:63489753-63489772 Msa0563190:intron 15.0%
!!! ACAAATTTTAAATTGCAAAA+TGG + chr4_1:63490629-63490648 Msa0563190:intron 15.0%
!!! CAAATTTTAAATTGCAAAAT+GGG + chr4_1:63490630-63490649 Msa0563190:intron 15.0%
!!! AAATTTTAAATTGCAAAATG+GGG + chr4_1:63490631-63490650 Msa0563190:intron 15.0%
!!! GTTTTTCTTATTAAATAGAA+TGG + chr4_1:63490921-63490940 Msa0563190:intron 15.0%
!!! TGATAGAGTTTTATTTTTTA+TGG + chr4_1:63491664-63491683 Msa0563190:intron 15.0%
!! TTAAACCATAGTATAATTTA+CGG + chr4_1:63492038-63492057 Msa0563190:intron 15.0%
!!! TGGCTTATATTTTTAATTTT+TGG + chr4_1:63492154-63492173 Msa0563190:intron 15.0%
!!! TTTTCAAATTAAACTAAGAA+TGG + chr4_1:63492903-63492922 Msa0563190:intron 15.0%
!! ATTGTAGTATTTATATTTAG+AGG + chr4_1:63493804-63493823 Msa0563190:intron 15.0%
!! TTACTTATTGATATTATTGA+TGG - chr4_1:63494955-63494974 None:intergenic 15.0%
!!! TATTTTTATATCATTCATCT+AGG + chr4_1:63495123-63495142 Msa0563190:intron 15.0%
!! GAAGAACTTAAAAAATTTAT+TGG + chr4_1:63495233-63495252 Msa0563190:CDS 15.0%
!! AATCATTCATTATTGTATAT+GGG - chr4_1:63495641-63495660 None:intergenic 15.0%
!!! GATTCTACTTTTTTTTTTTT+AGG + chr4_1:63495657-63495676 Msa0563190:three_prime_UTR 15.0%
!! TTTGTGAAATTGAATTTGAA+CGG + chr4_1:63488218-63488237 Msa0563190:CDS 20.0%
!!! AGGAAAAAGTTTTTGAATAA+AGG + chr4_1:63488245-63488264 Msa0563190:CDS 20.0%
!!! GGAAAAAGTTTTTGAATAAA+GGG + chr4_1:63488246-63488265 Msa0563190:CDS 20.0%
!!! AGGTATTTTAGAAATAGTAA+TGG + chr4_1:63488302-63488321 Msa0563190:CDS 20.0%
!! TAGAAGTAAACGTATAAAAT+CGG + chr4_1:63488337-63488356 Msa0563190:CDS 20.0%
!!! TGAGAATGTTGATTATTTAT+AGG + chr4_1:63489000-63489019 Msa0563190:intron 20.0%
!! ATTGCAATTATAATTCTTAC+AGG + chr4_1:63489101-63489120 Msa0563190:intron 20.0%
!!! ATTATTTCTGTGAGTTAATA+AGG + chr4_1:63489270-63489289 Msa0563190:intron 20.0%
!! TCAAAATATAAAGATCAACA+CGG - chr4_1:63489322-63489341 None:intergenic 20.0%
!!! GACTTCATTTTTCAATTTTA+AGG + chr4_1:63489746-63489765 Msa0563190:intron 20.0%
!!! GATTTTATTTCAAATACTGT+AGG - chr4_1:63489832-63489851 None:intergenic 20.0%
!! GTTATTAAATTATGTGTTTC+AGG + chr4_1:63489869-63489888 Msa0563190:intron 20.0%
!!! TTCTCAAAAGATTTTACTTA+TGG + chr4_1:63490604-63490623 Msa0563190:intron 20.0%
!!! AATTTTAAATTGCAAAATGG+GGG + chr4_1:63490632-63490651 Msa0563190:intron 20.0%
!! TGTATATTAGAATTGAGTAA+AGG - chr4_1:63491270-63491289 None:intergenic 20.0%
!! CAATTACAAATTCCTAAAAA+TGG - chr4_1:63491526-63491545 None:intergenic 20.0%
!! AAAATTAACAAACACAAGAT+GGG - chr4_1:63492089-63492108 None:intergenic 20.0%
!! AAAAATTAACAAACACAAGA+TGG - chr4_1:63492090-63492109 None:intergenic 20.0%
!!! AAATTTTCTGTTTCTACAAA+GGG + chr4_1:63492364-63492383 Msa0563190:intron 20.0%
!!! AGAATTTTTCACAAATAACA+AGG - chr4_1:63493640-63493659 None:intergenic 20.0%
!! AGAAATAACTTATGAAATGA+AGG + chr4_1:63493671-63493690 Msa0563190:CDS 20.0%
!!! TTTTTGTGTTTATTTTCTCA+TGG + chr4_1:63494157-63494176 Msa0563190:intron 20.0%
!!! TTTTTTTGGGTATTGAAAAT+TGG + chr4_1:63494458-63494477 Msa0563190:intron 20.0%
!!! CACTTACAATAATAATTTTG+GGG - chr4_1:63494508-63494527 None:intergenic 20.0%
!!! GCACTTACAATAATAATTTT+GGG - chr4_1:63494509-63494528 None:intergenic 20.0%
!!! TGCACTTACAATAATAATTT+TGG - chr4_1:63494510-63494529 None:intergenic 20.0%
!! TTATTGATATTATTGATGGA+AGG - chr4_1:63494951-63494970 None:intergenic 20.0%
!! AACTTATGAAATAGAAAATC+TGG - chr4_1:63494985-63495004 None:intergenic 20.0%
!! ATTCAATGTTAAACAAAAGT+AGG - chr4_1:63495075-63495094 None:intergenic 20.0%
!! TAACATTGAATGTGTATTAT+TGG + chr4_1:63495084-63495103 Msa0563190:intron 20.0%
!! TAAAACTGAGATTTAAATTG+TGG + chr4_1:63495154-63495173 Msa0563190:intron 20.0%
!! ATCATTCATTATTGTATATG+GGG - chr4_1:63495640-63495659 None:intergenic 20.0%
!! GAATCATTCATTATTGTATA+TGG - chr4_1:63495642-63495661 None:intergenic 20.0%
!!! TTCGATTTTTTGTTTGAAAC+TGG - chr4_1:63487831-63487850 None:intergenic 25.0%
! TTTGGAGAATGAAATTGATT+TGG - chr4_1:63488039-63488058 None:intergenic 25.0%
! AAGAAACATCCTAATTTGAT+AGG + chr4_1:63488140-63488159 Msa0563190:CDS 25.0%
! TTGTGAAATTGAATTTGAAC+GGG + chr4_1:63488219-63488238 Msa0563190:CDS 25.0%
!! AAAAGTTTTTGAATAAAGGG+TGG + chr4_1:63488249-63488268 Msa0563190:CDS 25.0%
! TGGAAGAAAAATGGAAAATT+TGG + chr4_1:63488269-63488288 Msa0563190:CDS 25.0%
! AAAAATGGAAAATTTGGTAG+TGG + chr4_1:63488275-63488294 Msa0563190:CDS 25.0%
!! AAGTTGTTGAAATTGATTCA+TGG + chr4_1:63488521-63488540 Msa0563190:CDS 25.0%
! TCAAATGTGATATGTGAAAA+TGG - chr4_1:63489026-63489045 None:intergenic 25.0%
!! TTTAGAATAAGATTTGTGCA+AGG - chr4_1:63489495-63489514 None:intergenic 25.0%
! CTGTGTCTTTGATAAAAAAT+AGG + chr4_1:63489544-63489563 Msa0563190:CDS 25.0%
! TACGTTAAAAAACTCAGATA+AGG - chr4_1:63489622-63489641 None:intergenic 25.0%
! TTTGAATGATAACAACATCA+AGG + chr4_1:63490030-63490049 Msa0563190:CDS 25.0%
!! ATCATTTAGAGTTATCATAG+TGG + chr4_1:63490145-63490164 Msa0563190:intron 25.0%
!!! TACCTTGCAATTTTTTATGA+AGG + chr4_1:63490330-63490349 Msa0563190:intron 25.0%
! AACCTTCATAAAAAATTGCA+AGG - chr4_1:63490335-63490354 None:intergenic 25.0%
!! ACTCAAAAGTCTAAAACATA+AGG - chr4_1:63490548-63490567 None:intergenic 25.0%
! ATCATAAAATAGGTGACAAT+AGG - chr4_1:63490990-63491009 None:intergenic 25.0%
! ACATCTCATCATCATAAAAT+AGG - chr4_1:63491000-63491019 None:intergenic 25.0%
! AAATTTATGATAACCATCTC+AGG + chr4_1:63491416-63491435 Msa0563190:intron 25.0%
!!! TTTGACTAAAAGCCATTTTT+AGG + chr4_1:63491511-63491530 Msa0563190:intron 25.0%
!! CACATTTTTGTACAAAAACA+AGG - chr4_1:63491551-63491570 None:intergenic 25.0%
!!! CTTGTTTTTGTACAAAAATG+TGG + chr4_1:63491549-63491568 Msa0563190:intron 25.0%
!! TTGTACAAAAATGTGGTTTT+TGG + chr4_1:63491556-63491575 Msa0563190:intron 25.0%
! GTGCATATTTATTTCGTAAA+TGG - chr4_1:63491723-63491742 None:intergenic 25.0%
! TAACAAAACTTTCTCTTGTA+AGG + chr4_1:63491750-63491769 Msa0563190:intron 25.0%
! TCAATCCGTAAATTATACTA+TGG - chr4_1:63492046-63492065 None:intergenic 25.0%
! CTTTGTAGAAACAGAAAATT+TGG - chr4_1:63492365-63492384 None:intergenic 25.0%
!!! CAAATTTTCTGTTTCTACAA+AGG + chr4_1:63492363-63492382 Msa0563190:intron 25.0%
!!! AACTGATTTGTTAATTCAAC+TGG - chr4_1:63492596-63492615 None:intergenic 25.0%
!!! CGTAAATCAGTATTTTTAAC+AGG - chr4_1:63493041-63493060 None:intergenic 25.0%
! TTTCCTTGTCTTAAAATCTT+TGG + chr4_1:63493178-63493197 Msa0563190:intron 25.0%
!!! TCTATTTTGACTTTCTAGTT+TGG + chr4_1:63493532-63493551 Msa0563190:intron 25.0%
!!! CTATTTTGACTTTCTAGTTT+GGG + chr4_1:63493533-63493552 Msa0563190:intron 25.0%
! TGTGAAAAATTCTCAGTTTA+AGG + chr4_1:63493647-63493666 Msa0563190:intron 25.0%
! GTGAAAAATTCTCAGTTTAA+GGG + chr4_1:63493648-63493667 Msa0563190:intron 25.0%
! ATAGAGAAAAAAAGTCTGTT+GGG - chr4_1:63493728-63493747 None:intergenic 25.0%
! CTGAGTAAAAATAAGAGAAA+TGG - chr4_1:63493993-63494012 None:intergenic 25.0%
!!! CATTTCTCTTATTTTTACTC+AGG + chr4_1:63493991-63494010 Msa0563190:intron 25.0%
!! TATGAACAGTTTTCCTTTTA+CGG + chr4_1:63494025-63494044 Msa0563190:intron 25.0%
! AGATTGAAAAGTAGTTGTTA+TGG + chr4_1:63494055-63494074 Msa0563190:intron 25.0%
! AATCTATGTGATAAGATGAA+CGG + chr4_1:63494242-63494261 Msa0563190:CDS 25.0%
! ATAATATTGGATTACTTTGC+TGG + chr4_1:63494302-63494321 Msa0563190:CDS 25.0%
! AACCTACTTATATGATGATA+AGG + chr4_1:63494529-63494548 Msa0563190:intron 25.0%
! ATCCTTATCATCATATAAGT+AGG - chr4_1:63494534-63494553 None:intergenic 25.0%
!! TTTTACCCCATATTGTATAA+GGG - chr4_1:63494829-63494848 None:intergenic 25.0%
! TTGTTGGGATGAAATAAATT+GGG + chr4_1:63494897-63494916 Msa0563190:intron 25.0%
!! AAATAAATTGGGTGACTTTT+AGG + chr4_1:63494908-63494927 Msa0563190:intron 25.0%
! TGAAATAGAAAATCTGGAAA+AGG - chr4_1:63494979-63494998 None:intergenic 25.0%
! GTGGAAAAAAATGAAATGAA+TGG - chr4_1:63495051-63495070 None:intergenic 25.0%
! AATTTCAACAGTGAATAACA+TGG - chr4_1:63495396-63495415 None:intergenic 25.0%
!!! TCAAACTGCATTTTTTGGAT+CGG - chr4_1:63487720-63487739 None:intergenic 30.0%
!! TTTTTGTTTGAAACTGGAAG+AGG - chr4_1:63487825-63487844 None:intergenic 30.0%
!! TTTATTGGATTTTGAGGGTT+TGG - chr4_1:63487862-63487881 None:intergenic 30.0%
!! AATTGATTTGGAGAAGAATC+CGG - chr4_1:63488027-63488046 None:intergenic 30.0%
! GAAGTTTCTAGATTGAGTAA+GGG - chr4_1:63488071-63488090 None:intergenic 30.0%
TTTCACAAAATTTCCTTCTC+CGG - chr4_1:63488207-63488226 None:intergenic 30.0%
AATAAAGGGTGGAAGAAAAA+TGG + chr4_1:63488260-63488279 Msa0563190:CDS 30.0%
!! GAAAATTTGGTAGTGGTAAA+AGG + chr4_1:63488282-63488301 Msa0563190:CDS 30.0%
ATAAAATCGGAACACAAAGA+AGG + chr4_1:63488350-63488369 Msa0563190:CDS 30.0%
TTTCTACAAAAGAAGATCCA+AGG - chr4_1:63488948-63488967 None:intergenic 30.0%
ATCAATAACAACAAGTGAGA+CGG - chr4_1:63489193-63489212 None:intergenic 30.0%
AAGCACATTGTATATCTGAA+TGG + chr4_1:63489214-63489233 Msa0563190:CDS 30.0%
ATTGTATATCTGAATGGTGA+GGG + chr4_1:63489220-63489239 Msa0563190:intron 30.0%
AAATATAAAGATCAACACGG+AGG - chr4_1:63489319-63489338 None:intergenic 30.0%
CTTCATAAGAGTCTTAATGT+AGG + chr4_1:63489399-63489418 Msa0563190:CDS 30.0%
TTATTCTAAATGCGCACTTA+AGG + chr4_1:63489505-63489524 Msa0563190:CDS 30.0%
TATTCTAAATGCGCACTTAA+GGG + chr4_1:63489506-63489525 Msa0563190:CDS 30.0%
TTATAGAATGAAAGACCTAC+TGG + chr4_1:63489650-63489669 Msa0563190:intron 30.0%
CATAGTATACTGCAAATTTC+AGG + chr4_1:63489713-63489732 Msa0563190:CDS 30.0%
!!! AATTTTAAGGTATTGGGTCT+CGG + chr4_1:63489759-63489778 Msa0563190:intron 30.0%
GATTTAACATTCAGTGTCAA+GGG - chr4_1:63490108-63490127 None:intergenic 30.0%
AGATTTAACATTCAGTGTCA+AGG - chr4_1:63490109-63490128 None:intergenic 30.0%
! AAAAATTGCAAGGTATCAGT+TGG - chr4_1:63490325-63490344 None:intergenic 30.0%
GTAATTCATTACAGTTTACC+TGG + chr4_1:63490822-63490841 Msa0563190:CDS 30.0%
! TTAAATAGAATGGGCATTGT+AGG + chr4_1:63490931-63490950 Msa0563190:intron 30.0%
TATTTGGTCTCAAGTTAATC+TGG - chr4_1:63491619-63491638 None:intergenic 30.0%
TTCGTAAATGGATAAATGAC+TGG - chr4_1:63491711-63491730 None:intergenic 30.0%
TCTCCAATATTTCCTTTACT+AGG + chr4_1:63491830-63491849 Msa0563190:intron 30.0%
TCACCTAGTAAAGGAAATAT+TGG - chr4_1:63491836-63491855 None:intergenic 30.0%
CATATTGTACATGCAATTGA+AGG - chr4_1:63491969-63491988 None:intergenic 30.0%
AGCATACAGTTTAGATAAGT+AGG - chr4_1:63492019-63492038 None:intergenic 30.0%
TTGTTTGAGAGATTATTCAG+TGG + chr4_1:63492134-63492153 Msa0563190:intron 30.0%
ATTCTAGTGTGATCACAATA+AGG - chr4_1:63492440-63492459 None:intergenic 30.0%
TTCAGATCTGAAAATAAGCA+CGG + chr4_1:63492521-63492540 Msa0563190:intron 30.0%
! TACTTTTGATATTCCAACTG+TGG + chr4_1:63492550-63492569 Msa0563190:CDS 30.0%
!!! TTTTTTCTCAAGCTTGTATG+TGG + chr4_1:63492654-63492673 Msa0563190:intron 30.0%
TTCTCTCACACTTCATTATT+GGG - chr4_1:63492766-63492785 None:intergenic 30.0%
TTTCTCTCACACTTCATTAT+TGG - chr4_1:63492767-63492786 None:intergenic 30.0%
!! TGGATAAAGCTATTGATTCA+TGG + chr4_1:63492923-63492942 Msa0563190:intron 30.0%
! TTGATAGTAATTCAAACGAC+AGG + chr4_1:63492966-63492985 Msa0563190:intron 30.0%
TGATAGTAATTCAAACGACA+GGG + chr4_1:63492967-63492986 Msa0563190:intron 30.0%
! ATTTTTAACAGGAGTAGTGA+AGG - chr4_1:63493030-63493049 None:intergenic 30.0%
!!! ATGCCAAAGATTTTAAGACA+AGG - chr4_1:63493184-63493203 None:intergenic 30.0%
CTTAAAATCTTTGGCATCAT+AGG + chr4_1:63493187-63493206 Msa0563190:intron 30.0%
GAAACAGTATAATTGTGTTC+TGG + chr4_1:63493600-63493619 Msa0563190:intron 30.0%
AACTTATGAAATGAAGGACA+TGG + chr4_1:63493677-63493696 Msa0563190:CDS 30.0%
GATAGAGAAAAAAAGTCTGT+TGG - chr4_1:63493729-63493748 None:intergenic 30.0%
ATCAGAAGTTGAAAGTTGTA+AGG + chr4_1:63493770-63493789 Msa0563190:CDS 30.0%
TCTAACATTCACTCTCTTAT+TGG + chr4_1:63493855-63493874 Msa0563190:intron 30.0%
GTAAAAGGAAAACTGTTCAT+AGG - chr4_1:63494026-63494045 None:intergenic 30.0%
CAATCTTTGAATACCGTAAA+AGG - chr4_1:63494041-63494060 None:intergenic 30.0%
ATGCTTGCAAAGGATAATAT+TGG + chr4_1:63494289-63494308 Msa0563190:CDS 30.0%
TGTTCTTTAGTACAGAACTT+AGG - chr4_1:63494390-63494409 None:intergenic 30.0%
!!! ATAATTTTGGGGCATAAACT+AGG - chr4_1:63494497-63494516 None:intergenic 30.0%
!!! GCTATTTTAGTACAAGATCA+TGG - chr4_1:63494576-63494595 None:intergenic 30.0%
AACTTGATGCATATCATGTT+TGG + chr4_1:63494676-63494695 Msa0563190:intron 30.0%
! TGAAAATTACCTGTTTCTCT+GGG + chr4_1:63494711-63494730 Msa0563190:intron 30.0%
! GTTTTACCCCATATTGTATA+AGG - chr4_1:63494830-63494849 None:intergenic 30.0%
!! TTTTTCAACGTACCAGAAAT+GGG - chr4_1:63494852-63494871 None:intergenic 30.0%
CATGTCCTTAAATACTTGTT+GGG + chr4_1:63494882-63494901 Msa0563190:intron 30.0%
TTCATCCCAACAAGTATTTA+AGG - chr4_1:63494890-63494909 None:intergenic 30.0%
CTTGTTGGGATGAAATAAAT+TGG + chr4_1:63494896-63494915 Msa0563190:intron 30.0%
!! AGCTTTGATTTGAGAAACAA+AGG + chr4_1:63495007-63495026 Msa0563190:intron 30.0%
!! GCTTTGATTTGAGAAACAAA+GGG + chr4_1:63495008-63495027 Msa0563190:intron 30.0%
ATGTTAAACAAAAGTAGGAG+TGG - chr4_1:63495070-63495089 None:intergenic 30.0%
! AGATTTAAATTGTGGATTGC+AGG + chr4_1:63495162-63495181 Msa0563190:intron 30.0%
! GATTTAAATTGTGGATTGCA+GGG + chr4_1:63495163-63495182 Msa0563190:intron 30.0%
! ATTTAAATTGTGGATTGCAG+GGG + chr4_1:63495164-63495183 Msa0563190:intron 30.0%
GTATACCAAGATAGACTTTA+AGG + chr4_1:63495190-63495209 Msa0563190:CDS 30.0%
TATGGGGAAAAATAAAAGAG+AGG - chr4_1:63495624-63495643 None:intergenic 30.0%
! TATACTAACTGTTTTGCACA+TGG - chr4_1:63495737-63495756 None:intergenic 30.0%
TGTGCAAAACAGTTAGTATA+AGG + chr4_1:63495737-63495756 Msa0563190:three_prime_UTR 30.0%
AGAAGAAGAACAAAGGGAAA+TGG - chr4_1:63487697-63487716 None:intergenic 35.0%
!!! CGGAATCAAACTGCATTTTT+TGG - chr4_1:63487725-63487744 None:intergenic 35.0%
! AGGGGTTTATTGGATTTTGA+GGG - chr4_1:63487867-63487886 None:intergenic 35.0%
! AAGGGGTTTATTGGATTTTG+AGG - chr4_1:63487868-63487887 None:intergenic 35.0%
TTCTTGTTCGGGAAGAATTT+CGG - chr4_1:63487901-63487920 None:intergenic 35.0%
! GAGTAAGGGTTTACGAATTT+TGG - chr4_1:63488057-63488076 None:intergenic 35.0%
! GGAAGTTTCTAGATTGAGTA+AGG - chr4_1:63488072-63488091 None:intergenic 35.0%
! GTTTTTGCAGAATCAACAAC+CGG - chr4_1:63488104-63488123 None:intergenic 35.0%
ACACTAGCACCTATCAAATT+AGG - chr4_1:63488152-63488171 None:intergenic 35.0%
TAATTTGATAGGTGCTAGTG+TGG + chr4_1:63488151-63488170 Msa0563190:CDS 35.0%
AATTGAATTTGAACGGGAAG+AGG + chr4_1:63488225-63488244 Msa0563190:CDS 35.0%
AATAGTAATGGCAGCAATAG+TGG + chr4_1:63488314-63488333 Msa0563190:CDS 35.0%
AAGCAACAGGAAAAGAAGAA+TGG + chr4_1:63488422-63488441 Msa0563190:CDS 35.0%
AACAGGAAAAGAAGAATGGT+TGG + chr4_1:63488426-63488445 Msa0563190:CDS 35.0%
ACAGGAAAAGAAGAATGGTT+GGG + chr4_1:63488427-63488446 Msa0563190:CDS 35.0%
GGAAAATGAATGCAAAGTGT+TGG + chr4_1:63488448-63488467 Msa0563190:CDS 35.0%
!! AAATGAATGCAAAGTGTTGG+AGG + chr4_1:63488451-63488470 Msa0563190:CDS 35.0%
TGAAGCTTCTGATGAGAATT+TGG + chr4_1:63488496-63488515 Msa0563190:CDS 35.0%
!!! TGGTTTTGATTCTTTTCGAG+AGG + chr4_1:63488541-63488560 Msa0563190:CDS 35.0%
!!! GGTTTTGATTCTTTTCGAGA+GGG + chr4_1:63488542-63488561 Msa0563190:CDS 35.0%
!!! GTTTTGATTCTTTTCGAGAG+GGG + chr4_1:63488543-63488562 Msa0563190:CDS 35.0%
TCAATCATCAAAGCTACCAA+AGG - chr4_1:63488698-63488717 None:intergenic 35.0%
GAATTTCTGTCTGTTATCTC+TGG + chr4_1:63489159-63489178 Msa0563190:CDS 35.0%
CATTGTATATCTGAATGGTG+AGG + chr4_1:63489219-63489238 Msa0563190:intron 35.0%
! CATAATGGCATCTAAAGTCA+TGG - chr4_1:63489457-63489476 None:intergenic 35.0%
ATTTGTGCAAGGAATATCCA+GGG - chr4_1:63489484-63489503 None:intergenic 35.0%
TCAGATAAGGATAGTTAGAG+GGG - chr4_1:63489609-63489628 None:intergenic 35.0%
CTCAGATAAGGATAGTTAGA+GGG - chr4_1:63489610-63489629 None:intergenic 35.0%
ACTCAGATAAGGATAGTTAG+AGG - chr4_1:63489611-63489630 None:intergenic 35.0%
! TATGAAGTCTTCTCCTTTTG+CGG + chr4_1:63489677-63489696 Msa0563190:intron 35.0%
!!! ATGCTTTTAACTTCCGCAAA+AGG - chr4_1:63489693-63489712 None:intergenic 35.0%
!! TGTGTTTCAGGTTTAGTATG+TGG + chr4_1:63489881-63489900 Msa0563190:intron 35.0%
TGATAACAACATCAAGGCAA+AGG + chr4_1:63490036-63490055 Msa0563190:CDS 35.0%
! TCATAGTGGTATTTCTGCAA+AGG + chr4_1:63490159-63490178 Msa0563190:CDS 35.0%
GGACTAGATAAAAGAGATGT+TGG + chr4_1:63490379-63490398 Msa0563190:CDS 35.0%
!! CTGCATTAATTTGCATGAAC+TGG + chr4_1:63490432-63490451 Msa0563190:intron 35.0%
!! AGTGATTCACCGATTCTAAT+TGG + chr4_1:63490488-63490507 Msa0563190:intron 35.0%
!! GTGATTCACCGATTCTAATT+GGG + chr4_1:63490489-63490508 Msa0563190:intron 35.0%
AACTAGAGCCCAATTAGAAT+CGG - chr4_1:63490500-63490519 None:intergenic 35.0%
! AGTCTAAAACATAAGGCACA+AGG - chr4_1:63490541-63490560 None:intergenic 35.0%
AATTGCAAAATGGGGGTAAA+TGG + chr4_1:63490639-63490658 Msa0563190:intron 35.0%
AAAATGGGGGTAAATGGTAT+TGG + chr4_1:63490645-63490664 Msa0563190:intron 35.0%
TTCGCACTACTTATTTGCTT+TGG + chr4_1:63490734-63490753 Msa0563190:intron 35.0%
CCTAAACACAGTTATGACAA+TGG - chr4_1:63490803-63490822 None:intergenic 35.0%
CCATTGTCATAACTGTGTTT+AGG + chr4_1:63490800-63490819 Msa0563190:intron 35.0%
AACTTCGTAGTCTAATGTAC+AGG + chr4_1:63491026-63491045 Msa0563190:CDS 35.0%
! TAACGAACATATTTTCCCAC+AGG - chr4_1:63491203-63491222 None:intergenic 35.0%
CAGGTTTGATATGAAAGAAG+AGG + chr4_1:63491243-63491262 Msa0563190:CDS 35.0%
ACTTTGATAAACCAGATGAG+TGG + chr4_1:63491310-63491329 Msa0563190:intron 35.0%
AGACTTTCATAACATCCTGT+TGG + chr4_1:63491349-63491368 Msa0563190:intron 35.0%
GACTTTCATAACATCCTGTT+GGG + chr4_1:63491350-63491369 Msa0563190:intron 35.0%
TCACTATCAATGTATCAGCA+TGG - chr4_1:63491382-63491401 None:intergenic 35.0%
!! TGCTGATACATTGATAGTGA+AGG + chr4_1:63491382-63491401 Msa0563190:intron 35.0%
!! GCTGATACATTGATAGTGAA+GGG + chr4_1:63491383-63491402 Msa0563190:intron 35.0%
!! CTGATACATTGATAGTGAAG+GGG + chr4_1:63491384-63491403 Msa0563190:intron 35.0%
!! TGATACATTGATAGTGAAGG+GGG + chr4_1:63491385-63491404 Msa0563190:intron 35.0%
!! AATCTTTAAAGCTCCTGAGA+TGG - chr4_1:63491432-63491451 None:intergenic 35.0%
!!! TGGGTTTTAAGCACTAAACA+AGG - chr4_1:63491593-63491612 None:intergenic 35.0%
TCTCAAGTTAATCTGGACAT+GGG - chr4_1:63491612-63491631 None:intergenic 35.0%
CTTGAGACCAAATAAAGCTA+AGG + chr4_1:63491625-63491644 Msa0563190:intron 35.0%
!! AACTGCACCTTAGCTTTATT+TGG - chr4_1:63491635-63491654 None:intergenic 35.0%
ATGGACAACCATCTACTTAT+AGG + chr4_1:63491683-63491702 Msa0563190:intron 35.0%
TTTAATCTGTAGACCTAGTC+TGG - chr4_1:63491805-63491824 None:intergenic 35.0%
!! GTGTGTTCTGAGTTTTCATA+TGG + chr4_1:63491929-63491948 Msa0563190:CDS 35.0%
! AGCAATAGCAGAAACCTTTT+GGG - chr4_1:63492210-63492229 None:intergenic 35.0%
! CTATTGCTGTGATTCTGAAA+AGG + chr4_1:63492222-63492241 Msa0563190:CDS 35.0%
ACAATAACCATCCATTTCAG+GGG - chr4_1:63492297-63492316 None:intergenic 35.0%
CACAATAACCATCCATTTCA+GGG - chr4_1:63492298-63492317 None:intergenic 35.0%
ACACAATAACCATCCATTTC+AGG - chr4_1:63492299-63492318 None:intergenic 35.0%
TAATGTTGTCAACCTCAAGA+TGG + chr4_1:63492331-63492350 Msa0563190:intron 35.0%
!! GAAGAAAAAGTGCCATTAGA+CGG - chr4_1:63492398-63492417 None:intergenic 35.0%
AAATCAGTTGTATGCCCTAA+AGG + chr4_1:63492607-63492626 Msa0563190:CDS 35.0%
TCGACTAATCCAAACCTTTA+GGG - chr4_1:63492624-63492643 None:intergenic 35.0%
ATCGACTAATCCAAACCTTT+AGG - chr4_1:63492625-63492644 None:intergenic 35.0%
GAATCTGCTAAACTATCTTC+AGG - chr4_1:63492832-63492851 None:intergenic 35.0%
GATAGTAATTCAAACGACAG+GGG + chr4_1:63492968-63492987 Msa0563190:intron 35.0%
ATTTGATGCAGGGTAACAAA+GGG - chr4_1:63492997-63493016 None:intergenic 35.0%
CTAATCAGAGATTTGATGCA+GGG - chr4_1:63493007-63493026 None:intergenic 35.0%
ACACACAAACACTACATACT+TGG - chr4_1:63493262-63493281 None:intergenic 35.0%
ATTGAGTTAGAACCTTGCAA+AGG + chr4_1:63493290-63493309 Msa0563190:intron 35.0%
TTGAGTTAGAACCTTGCAAA+GGG + chr4_1:63493291-63493310 Msa0563190:intron 35.0%
AAAAAATATCTCGCACTGCA+AGG - chr4_1:63493500-63493519 None:intergenic 35.0%
TTCCAGAATCCTATAACAGT+AGG - chr4_1:63493703-63493722 None:intergenic 35.0%
TATCAGCAGATATTACACGA+TGG + chr4_1:63493745-63493764 Msa0563190:CDS 35.0%
!! TTATATTTAGAGGAGTGCTG+TGG + chr4_1:63493814-63493833 Msa0563190:intron 35.0%
TTATATGGGATCCATTTCCA+AGG - chr4_1:63493906-63493925 None:intergenic 35.0%
GAAATGGATCCCATATAAAG+TGG + chr4_1:63493908-63493927 Msa0563190:intron 35.0%
TGGATCTCACCACTTTATAT+GGG - chr4_1:63493920-63493939 None:intergenic 35.0%
AATGCAATGAATTATCCACC+CGG - chr4_1:63494139-63494158 None:intergenic 35.0%
TCTTGTGTAGGTACGAAAAA+TGG + chr4_1:63494187-63494206 Msa0563190:intron 35.0%
GCAAGAAAATTGATCAAAGC+AGG + chr4_1:63494345-63494364 Msa0563190:CDS 35.0%
TTAGGTGACAGAAACTAGTA+AGG - chr4_1:63494372-63494391 None:intergenic 35.0%
ATGCATATCATGTTTGGAAG+AGG + chr4_1:63494682-63494701 Msa0563190:intron 35.0%
! CTGAAAATTACCTGTTTCTC+TGG + chr4_1:63494710-63494729 Msa0563190:intron 35.0%
! GAAAATTACCTGTTTCTCTG+GGG + chr4_1:63494712-63494731 Msa0563190:intron 35.0%
AATTGCTCTGTAGAAAAACC+TGG - chr4_1:63494742-63494761 None:intergenic 35.0%
ATATTGTATAAGGGTAGGCT+GGG - chr4_1:63494820-63494839 None:intergenic 35.0%
AGCCTACCCTTATACAATAT+GGG + chr4_1:63494820-63494839 Msa0563190:CDS 35.0%
!! GTTTTTCAACGTACCAGAAA+TGG - chr4_1:63494853-63494872 None:intergenic 35.0%
CCAACAAGTATTTAAGGACA+TGG - chr4_1:63494884-63494903 None:intergenic 35.0%
CCATGTCCTTAAATACTTGT+TGG + chr4_1:63494881-63494900 Msa0563190:intron 35.0%
! TTGATTTGAGAAACAAAGGG+AGG + chr4_1:63495011-63495030 Msa0563190:intron 35.0%
! TACCAAGATAGACTTTAAGG+TGG + chr4_1:63495193-63495212 Msa0563190:CDS 35.0%
ACAGATGTCTTTACTGGTAA+GGG - chr4_1:63495314-63495333 None:intergenic 35.0%
!! AGGGATTAGTTTCTACAACA+AGG - chr4_1:63495558-63495577 None:intergenic 35.0%
AGAAGAACAAAGGGAAATGG+TGG - chr4_1:63487694-63487713 None:intergenic 40.0%
GATCGGAGAAGAAGAACAAA+GGG - chr4_1:63487703-63487722 None:intergenic 40.0%
TGAAGAAATGTGAGATCCGT+CGG - chr4_1:63487757-63487776 None:intergenic 40.0%
! TTGTTTGAAACTGGAAGAGG+TGG - chr4_1:63487822-63487841 None:intergenic 40.0%
TCTTGTTCGGGAAGAATTTC+GGG - chr4_1:63487900-63487919 None:intergenic 40.0%
AAGGGGAAAGATTCTTGTTC+GGG - chr4_1:63487912-63487931 None:intergenic 40.0%
GAAGGGGAAAGATTCTTGTT+CGG - chr4_1:63487913-63487932 None:intergenic 40.0%
GAGTGAGAAGATGAAGTTGA+AGG - chr4_1:63487987-63488006 None:intergenic 40.0%
! CCTTTTAGTGCCTTGACTAT+CGG - chr4_1:63488182-63488201 None:intergenic 40.0%
TGTAGAGAATGCAAAGCAAC+AGG + chr4_1:63488409-63488428 Msa0563190:CDS 40.0%
CGATTAAGAATGTGCTTGCT+GGG + chr4_1:63488576-63488595 Msa0563190:CDS 40.0%
!! TACGCTTGTTGTTAGTCCTT+TGG + chr4_1:63488679-63488698 Msa0563190:CDS 40.0%
!!! CAGTGCTCAGGTTGATTTTA+TGG + chr4_1:63488763-63488782 Msa0563190:intron 40.0%
AACTGAATTCAGCTTTGCCT+TGG + chr4_1:63488928-63488947 Msa0563190:intron 40.0%
TCTTCATTCAAGAATCGCTC+TGG - chr4_1:63489141-63489160 None:intergenic 40.0%
TTTCTGTCTGTTATCTCTGG+TGG + chr4_1:63489162-63489181 Msa0563190:CDS 40.0%
TTCTGTCTGTTATCTCTGGT+GGG + chr4_1:63489163-63489182 Msa0563190:CDS 40.0%
TGAGTCTCATGAATGAAGGT+CGG - chr4_1:63489368-63489387 None:intergenic 40.0%
AATATCCAGGGCAGACATAA+TGG - chr4_1:63489472-63489491 None:intergenic 40.0%
GATTTGTGCAAGGAATATCC+AGG - chr4_1:63489485-63489504 None:intergenic 40.0%
AAGACTTCATAAGCACCAGT+AGG - chr4_1:63489668-63489687 None:intergenic 40.0%
! GCAAATTTCAGGTGCGTATA+TGG + chr4_1:63489724-63489743 Msa0563190:intron 40.0%
AGTGATGTTGTATTCTGCAG+TGG + chr4_1:63489922-63489941 Msa0563190:intron 40.0%
TGGTTCAAACAAGATCAGAG+TGG + chr4_1:63490207-63490226 Msa0563190:CDS 40.0%
TGCGTCTAATACAACATTGC+TGG + chr4_1:63490267-63490286 Msa0563190:intron 40.0%
GCGTCTAATACAACATTGCT+GGG + chr4_1:63490268-63490287 Msa0563190:intron 40.0%
TATGAAGGTTGTTGCAACTG+TGG + chr4_1:63490345-63490364 Msa0563190:intron 40.0%
AAAGAGATGTTGGAGCAGTA+AGG + chr4_1:63490389-63490408 Msa0563190:intron 40.0%
ACATAAGGCACAAGGAAAAG+TGG - chr4_1:63490533-63490552 None:intergenic 40.0%
GGAGAATTGAGCTCTTTACT+TGG + chr4_1:63490666-63490685 Msa0563190:intron 40.0%
TTACAGTTTACCTGGAAGTC+TGG + chr4_1:63490830-63490849 Msa0563190:CDS 40.0%
! AAGTCTGGAAGAGTATGTAC+AGG + chr4_1:63490845-63490864 Msa0563190:CDS 40.0%
! CAATTTTTCATCCGCAGTGA+AGG + chr4_1:63491118-63491137 Msa0563190:intron 40.0%
!! ATTCATCGATTCCTTCACTG+CGG - chr4_1:63491132-63491151 None:intergenic 40.0%
GTAACTGAAAACCACTCATC+TGG - chr4_1:63491324-63491343 None:intergenic 40.0%
GTCTCAAGTTAATCTGGACA+TGG - chr4_1:63491613-63491632 None:intergenic 40.0%
AAAGCTAAGGTGCAGTTTCT+AGG + chr4_1:63491638-63491657 Msa0563190:intron 40.0%
! TGTGTTACCTTTTCCAGACT+AGG + chr4_1:63491789-63491808 Msa0563190:intron 40.0%
CTGTGAGAATCACCTAGTAA+AGG - chr4_1:63491845-63491864 None:intergenic 40.0%
TTTGGCATTAATGCAGACTC+CGG + chr4_1:63492172-63492191 Msa0563190:intron 40.0%
! CAGCAATAGCAGAAACCTTT+TGG - chr4_1:63492211-63492230 None:intergenic 40.0%
! CAAACCATTTTCCCCTGAAA+TGG + chr4_1:63492283-63492302 Msa0563190:intron 40.0%
TTGGATCAGATTCCATCTTG+AGG - chr4_1:63492346-63492365 None:intergenic 40.0%
GATCTGAAAACACGTAACGA+TGG - chr4_1:63492509-63492528 None:intergenic 40.0%
AGTTGTATGCCCTAAAGGTT+TGG + chr4_1:63492612-63492631 Msa0563190:intron 40.0%
!! GGTTTGGATTAGTCGATAAC+TGG + chr4_1:63492628-63492647 Msa0563190:intron 40.0%
GATTTGATGCAGGGTAACAA+AGG - chr4_1:63492998-63493017 None:intergenic 40.0%
GCTAATCAGAGATTTGATGC+AGG - chr4_1:63493008-63493027 None:intergenic 40.0%
AGCCATAAATACTTGCAGCA+TGG + chr4_1:63493111-63493130 Msa0563190:intron 40.0%
AGCCATGCTGCAAGTATTTA+TGG - chr4_1:63493116-63493135 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG - chr4_1:63493365-63493384 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG - chr4_1:63493391-63493410 None:intergenic 40.0%
! CTTACCCTGTTTTACACAAG+AGG + chr4_1:63493389-63493408 Msa0563190:CDS 40.0%
ACAGCCTCTTGTGTAAAACA+GGG - chr4_1:63493396-63493415 None:intergenic 40.0%
AACAGCCTCTTGTGTAAAAC+AGG - chr4_1:63493397-63493416 None:intergenic 40.0%
GTTGTTGTCATGTGACTGAA+AGG - chr4_1:63493440-63493459 None:intergenic 40.0%
GTTTCCGATACCATACACAA+GGG - chr4_1:63493585-63493604 None:intergenic 40.0%
TGTTTCCGATACCATACACA+AGG - chr4_1:63493586-63493605 None:intergenic 40.0%
GTGGATCTCACCACTTTATA+TGG - chr4_1:63493921-63493940 None:intergenic 40.0%
ATAAAGTGGTGAGATCCACA+TGG + chr4_1:63493922-63493941 Msa0563190:intron 40.0%
TAAAGTGGTGAGATCCACAT+GGG + chr4_1:63493923-63493942 Msa0563190:intron 40.0%
TTTATTGGGTGAAACCCATG+TGG - chr4_1:63493940-63493959 None:intergenic 40.0%
ACATGGGTTTCACCCAATAA+AGG + chr4_1:63493939-63493958 Msa0563190:intron 40.0%
GTTTCACCCAATAAAGGAGT+GGG + chr4_1:63493945-63493964 Msa0563190:intron 40.0%
CTAACACCCACTCCTTTATT+GGG - chr4_1:63493954-63493973 None:intergenic 40.0%
TCTAACACCCACTCCTTTAT+TGG - chr4_1:63493955-63493974 None:intergenic 40.0%
TTTCGTACCTACACAAGAAG+CGG - chr4_1:63494185-63494204 None:intergenic 40.0%
ATCACACTTCATGCTTGCAA+AGG + chr4_1:63494279-63494298 Msa0563190:CDS 40.0%
ATAAAGGTGAGTCGTTACAC+AGG + chr4_1:63494633-63494652 Msa0563190:intron 40.0%
CATATTGTATAAGGGTAGGC+TGG - chr4_1:63494821-63494840 None:intergenic 40.0%
CAGCCTACCCTTATACAATA+TGG + chr4_1:63494819-63494838 Msa0563190:CDS 40.0%
GCCTACCCTTATACAATATG+GGG + chr4_1:63494821-63494840 Msa0563190:CDS 40.0%
ACCCCATATTGTATAAGGGT+AGG - chr4_1:63494825-63494844 None:intergenic 40.0%
TATGGGGTAAAACCCATTTC+TGG + chr4_1:63494837-63494856 Msa0563190:CDS 40.0%
CACCACCTTAAAGTCTATCT+TGG - chr4_1:63495198-63495217 None:intergenic 40.0%
!! GATAGACTTTAAGGTGGTGA+TGG + chr4_1:63495199-63495218 Msa0563190:CDS 40.0%
!! TAAGGGACTTGGTGCAAATT+TGG - chr4_1:63495297-63495316 None:intergenic 40.0%
CACAGATGTCTTTACTGGTA+AGG - chr4_1:63495315-63495334 None:intergenic 40.0%
CAATGCACAGATGTCTTTAC+TGG - chr4_1:63495320-63495339 None:intergenic 40.0%
!! GACATCTGTGCATTGATTGA+AGG + chr4_1:63495325-63495344 Msa0563190:three_prime_UTR 40.0%
!! ATCTGTGCATTGATTGAAGG+TGG + chr4_1:63495328-63495347 Msa0563190:three_prime_UTR 40.0%
!! TCTGTGCATTGATTGAAGGT+GGG + chr4_1:63495329-63495348 Msa0563190:three_prime_UTR 40.0%
! TACTTTTGCTTGTCTTGACC+TGG - chr4_1:63495444-63495463 None:intergenic 40.0%
CTAGGTCGCACATATAATGA+GGG - chr4_1:63495481-63495500 None:intergenic 40.0%
TCTAGGTCGCACATATAATG+AGG - chr4_1:63495482-63495501 None:intergenic 40.0%
CATTATATGTGCGACCTAGA+TGG + chr4_1:63495482-63495501 Msa0563190:three_prime_UTR 40.0%
ATCCTTGATTCCTTCCATCT+AGG - chr4_1:63495499-63495518 None:intergenic 40.0%
GTTGTAGAAACTAATCCCTC+AGG + chr4_1:63495559-63495578 Msa0563190:three_prime_UTR 40.0%
AACTAATCCCTCAGGTCAAA+AGG + chr4_1:63495567-63495586 Msa0563190:three_prime_UTR 40.0%
! ACCTTTTCCTTTTGACCTGA+GGG - chr4_1:63495577-63495596 None:intergenic 40.0%
! AACCTTTTCCTTTTGACCTG+AGG - chr4_1:63495578-63495597 None:intergenic 40.0%
GGATCGGAGAAGAAGAACAA+AGG - chr4_1:63487704-63487723 None:intergenic 45.0%
GATTCCGATTCAGATTCCGA+CGG + chr4_1:63487738-63487757 Msa0563190:CDS 45.0%
AGATCCGTCGGAATCTGAAT+CGG - chr4_1:63487745-63487764 None:intergenic 45.0%
GAACTTGGTTGTTGTCTTGG+CGG - chr4_1:63487783-63487802 None:intergenic 45.0%
GGTGAACTTGGTTGTTGTCT+TGG - chr4_1:63487786-63487805 None:intergenic 45.0%
!! TTTGGTGGTGATGGTGAACT+TGG - chr4_1:63487798-63487817 None:intergenic 45.0%
! GAAACTGGAAGAGGTGGTTT+TGG - chr4_1:63487816-63487835 None:intergenic 45.0%
GGGTTTAGGAAGGGGTTTAT+TGG - chr4_1:63487877-63487896 None:intergenic 45.0%
AATTTCGGGGGGTTTAGGAA+GGG - chr4_1:63487886-63487905 None:intergenic 45.0%
TTGTTCGGGAAGAATTTCGG+GGG - chr4_1:63487898-63487917 None:intergenic 45.0%
CTTGTTCGGGAAGAATTTCG+GGG - chr4_1:63487899-63487918 None:intergenic 45.0%
GGATGTTGAAAGGAAGTGAG+GGG - chr4_1:63487944-63487963 None:intergenic 45.0%
CGGATGTTGAAAGGAAGTGA+GGG - chr4_1:63487945-63487964 None:intergenic 45.0%
TCGGATGTTGAAAGGAAGTG+AGG - chr4_1:63487946-63487965 None:intergenic 45.0%
GTTCGTTGTCGGATGTTGAA+AGG - chr4_1:63487954-63487973 None:intergenic 45.0%
ATTTGGAGAAGAATCCGGCA+GGG - chr4_1:63488022-63488041 None:intergenic 45.0%
AGAAACTTCCGAAGCTGAAC+CGG + chr4_1:63488082-63488101 Msa0563190:CDS 45.0%
! ATCAACAACCGGTTCAGCTT+CGG - chr4_1:63488093-63488112 None:intergenic 45.0%
! CCGATAGTCAAGGCACTAAA+AGG + chr4_1:63488179-63488198 Msa0563190:CDS 45.0%
! AGGCGATGATGATGATGATG+AGG + chr4_1:63488370-63488389 Msa0563190:CDS 45.0%
! CGATGATGATGATGATGAGG+AGG + chr4_1:63488373-63488392 Msa0563190:CDS 45.0%
! TGATGATGATGATGAGGAGG+AGG + chr4_1:63488376-63488395 Msa0563190:CDS 45.0%
!! TGAATGCAAAGTGTTGGAGG+AGG + chr4_1:63488454-63488473 Msa0563190:CDS 45.0%
GCGATTAAGAATGTGCTTGC+TGG + chr4_1:63488575-63488594 Msa0563190:CDS 45.0%
!!! GACGATGCTTATTTTGCCGA+CGG + chr4_1:63488604-63488623 Msa0563190:CDS 45.0%
!!! ACGATGCTTATTTTGCCGAC+GGG + chr4_1:63488605-63488624 Msa0563190:CDS 45.0%
!!! TTGAGTGCGTTGATTTTGCC+TGG + chr4_1:63488653-63488672 Msa0563190:CDS 45.0%
!!! TGAGTGCGTTGATTTTGCCT+GGG + chr4_1:63488654-63488673 Msa0563190:CDS 45.0%
CTAACAACAAGCGTAATCCC+AGG - chr4_1:63488674-63488693 None:intergenic 45.0%
ACAATTGCCTCCGCTCATTT+CGG + chr4_1:63488727-63488746 Msa0563190:CDS 45.0%
AAGCTGGTTGAGTGTTTCAG+AGG - chr4_1:63488876-63488895 None:intergenic 45.0%
TTATTGTGCCTTGACGAAGC+TGG - chr4_1:63488892-63488911 None:intergenic 45.0%
GCTTCGTCAAGGCACAATAA+AGG + chr4_1:63488892-63488911 Msa0563190:CDS 45.0%
! GCTCTGAGTCTCATGAATGA+AGG - chr4_1:63489372-63489391 None:intergenic 45.0%
! GGTATTTCTGCAAAGGAACG+TGG + chr4_1:63490166-63490185 Msa0563190:CDS 45.0%
GTTGTTGCAACTGTGGCATT+TGG + chr4_1:63490352-63490371 Msa0563190:CDS 45.0%
! CTAATTGGGCTCTAGTTGCA+TGG + chr4_1:63490503-63490522 Msa0563190:intron 45.0%
ACATACTCTTCCAGACTTCC+AGG - chr4_1:63490843-63490862 None:intergenic 45.0%
! GAATGGGCATTGTAGGAGAT+AGG + chr4_1:63490938-63490957 Msa0563190:intron 45.0%
ATATCAAACCTGCGTGAAGC+AGG - chr4_1:63491235-63491254 None:intergenic 45.0%
CATAACATCCTGTTGGGAGT+TGG + chr4_1:63491356-63491375 Msa0563190:intron 45.0%
GACTGGTGCCTATAAGTAGA+TGG - chr4_1:63491694-63491713 None:intergenic 45.0%
CTGTAGACCTAGTCTGGAAA+AGG - chr4_1:63491799-63491818 None:intergenic 45.0%
!! TCTCACAGTTTTGACACGCT+TGG + chr4_1:63491857-63491876 Msa0563190:CDS 45.0%
ACACACGTTGCATTTGTCTG+TGG - chr4_1:63491915-63491934 None:intergenic 45.0%
! AGCAGAAACCTTTTGGGCAA+GGG - chr4_1:63492204-63492223 None:intergenic 45.0%
! TAGCAGAAACCTTTTGGGCA+AGG - chr4_1:63492205-63492224 None:intergenic 45.0%
CCATCCATTTCAGGGGAAAA+TGG - chr4_1:63492290-63492309 None:intergenic 45.0%
! CCATTTTCCCCTGAAATGGA+TGG + chr4_1:63492287-63492306 Msa0563190:intron 45.0%
TCCAACTGTGGCAAATGACA+TGG + chr4_1:63492562-63492581 Msa0563190:CDS 45.0%
CCAACTGTGGCAAATGACAT+GGG + chr4_1:63492563-63492582 Msa0563190:CDS 45.0%
CAACTGTGGCAAATGACATG+GGG + chr4_1:63492564-63492583 Msa0563190:CDS 45.0%
AACTGTGGCAAATGACATGG+GGG + chr4_1:63492565-63492584 Msa0563190:CDS 45.0%
! ATCCAGCTTGTTTAAGCGCA+TGG + chr4_1:63492791-63492810 Msa0563190:intron 45.0%
AACCATGCGCTTAAACAAGC+TGG - chr4_1:63492796-63492815 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - chr4_1:63493366-63493385 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr4_1:63493369-63493388 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr4_1:63493400-63493419 Msa0563190:CDS 45.0%
TCATGTGACTGAAAGGTCAC+GGG - chr4_1:63493433-63493452 None:intergenic 45.0%
GTCATGTGACTGAAAGGTCA+CGG - chr4_1:63493434-63493453 None:intergenic 45.0%
! ACTGCAAGGTTCTGACATGA+GGG - chr4_1:63493486-63493505 None:intergenic 45.0%
!! ACTTTCTAGTTTGGGACACC+TGG + chr4_1:63493541-63493560 Msa0563190:intron 45.0%
TCTGCCCTTGTGTATGGTAT+CGG + chr4_1:63493578-63493597 Msa0563190:intron 45.0%
AGGACATGGCCTACTGTTAT+AGG + chr4_1:63493691-63493710 Msa0563190:CDS 45.0%
GGCCTACTGTTATAGGATTC+TGG + chr4_1:63493698-63493717 Msa0563190:CDS 45.0%
GGTTTCACCCAATAAAGGAG+TGG + chr4_1:63493944-63493963 Msa0563190:intron 45.0%
ACAACTCATAAGTCCTGACC+AGG + chr4_1:63494105-63494124 Msa0563190:intron 45.0%
TCCTGACCAGGAACTATAAC+CGG + chr4_1:63494117-63494136 Msa0563190:intron 45.0%
ACATATGCAGTCGTTTCCTG+CGG + chr4_1:63494604-63494623 Msa0563190:intron 45.0%
TTTCCTGCGGGCAGATATAA+AGG + chr4_1:63494617-63494636 Msa0563190:CDS 45.0%
! AAATTGTGGATTGCAGGGGA+AGG + chr4_1:63495168-63495187 Msa0563190:intron 45.0%
! CTTGGTGCAAATTTGGCAGA+TGG - chr4_1:63495290-63495309 None:intergenic 45.0%
GTCTTTACTGGTAAGGGACT+TGG - chr4_1:63495308-63495327 None:intergenic 45.0%
!! CTGTGCATTGATTGAAGGTG+GGG + chr4_1:63495330-63495349 Msa0563190:three_prime_UTR 45.0%
ATATGTGCGACCTAGATGGA+AGG + chr4_1:63495486-63495505 Msa0563190:three_prime_UTR 45.0%
GACCTAGATGGAAGGAATCA+AGG + chr4_1:63495494-63495513 Msa0563190:three_prime_UTR 45.0%
TCCCTCAGGTCAAAAGGAAA+AGG + chr4_1:63495573-63495592 Msa0563190:three_prime_UTR 45.0%
!!! AGAGGTGGTTTTGGTGGTGA+TGG - chr4_1:63487807-63487826 None:intergenic 50.0%
!!! ACTGGAAGAGGTGGTTTTGG+TGG - chr4_1:63487813-63487832 None:intergenic 50.0%
ATTTCGGGGGGTTTAGGAAG+GGG - chr4_1:63487885-63487904 None:intergenic 50.0%
GAATTTCGGGGGGTTTAGGA+AGG - chr4_1:63487887-63487906 None:intergenic 50.0%
GGAAGAATTTCGGGGGGTTT+AGG - chr4_1:63487891-63487910 None:intergenic 50.0%
TGTTCGGGAAGAATTTCGGG+GGG - chr4_1:63487897-63487916 None:intergenic 50.0%
AAGGAAGTGAGGGGATGGAA+GGG - chr4_1:63487935-63487954 None:intergenic 50.0%
AAAGGAAGTGAGGGGATGGA+AGG - chr4_1:63487936-63487955 None:intergenic 50.0%
GTTGAAAGGAAGTGAGGGGA+TGG - chr4_1:63487940-63487959 None:intergenic 50.0%
GATTTGGAGAAGAATCCGGC+AGG - chr4_1:63488023-63488042 None:intergenic 50.0%
! TGTGGTAACGCCGATAGTCA+AGG + chr4_1:63488169-63488188 Msa0563190:CDS 50.0%
! GATGATGATGAGGAGGAGGA+TGG + chr4_1:63488380-63488399 Msa0563190:CDS 50.0%
TGATGAGGAGGAGGATGGTA+TGG + chr4_1:63488385-63488404 Msa0563190:CDS 50.0%
GATGAGGAGGAGGATGGTAT+GGG + chr4_1:63488386-63488405 Msa0563190:CDS 50.0%
!! TTATTTTGCCGACGGGTGCT+GGG + chr4_1:63488612-63488631 Msa0563190:CDS 50.0%
CAATTGCCTCCGCTCATTTC+GGG + chr4_1:63488728-63488747 Msa0563190:CDS 50.0%
ACACTCAACCAGCTTCGTCA+AGG + chr4_1:63488881-63488900 Msa0563190:CDS 50.0%
AGATGCCATTATGTCTGCCC+TGG + chr4_1:63489464-63489483 Msa0563190:CDS 50.0%
AAAGGAACGTGGCTACGTAC+AGG + chr4_1:63490177-63490196 Msa0563190:CDS 50.0%
GGCTACGTACAGGAGTTGTT+TGG + chr4_1:63490187-63490206 Msa0563190:CDS 50.0%
TGCAACTGTGGCATTTGGCA+TGG + chr4_1:63490357-63490376 Msa0563190:CDS 50.0%
GCAACTGTGGCATTTGGCAT+GGG + chr4_1:63490358-63490377 Msa0563190:CDS 50.0%
TTGTAGGAGATAGGACGTGC+CGG + chr4_1:63490947-63490966 Msa0563190:intron 50.0%
CTGCTGACAAAAGCTCCTGT+GGG + chr4_1:63491185-63491204 Msa0563190:CDS 50.0%
TCAAAGAACCTGCTTCACGC+AGG + chr4_1:63491224-63491243 Msa0563190:CDS 50.0%
!! AGTTTTGACACGCTTGGAGC+TGG + chr4_1:63491863-63491882 Msa0563190:CDS 50.0%
!! GTTTTGACACGCTTGGAGCT+GGG + chr4_1:63491864-63491883 Msa0563190:CDS 50.0%
AGGGAACGCATACCGTCTAA+TGG + chr4_1:63492383-63492402 Msa0563190:intron 50.0%
! CCCATGTCATTTGCCACAGT+TGG - chr4_1:63492566-63492585 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG + chr4_1:63493456-63493475 Msa0563190:CDS 50.0%
TCTGACATGAGGGGTAACCT+TGG - chr4_1:63493476-63493495 None:intergenic 50.0%
! CTGCAAGGTTCTGACATGAG+GGG - chr4_1:63493485-63493504 None:intergenic 50.0%
! CACTGCAAGGTTCTGACATG+AGG - chr4_1:63493487-63493506 None:intergenic 50.0%
! TTTGGGACACCTGGCCAATT+TGG + chr4_1:63493550-63493569 Msa0563190:intron 50.0%
AAGGGCAGAGTAGGCCAAAT+TGG - chr4_1:63493567-63493586 None:intergenic 50.0%
ACCATACACAAGGGCAGAGT+AGG - chr4_1:63493576-63493595 None:intergenic 50.0%
TGAGTCCCACACCTTGGAAA+TGG + chr4_1:63493892-63493911 Msa0563190:intron 50.0%
GGGATCCATTTCCAAGGTGT+GGG - chr4_1:63493900-63493919 None:intergenic 50.0%
TGGGATCCATTTCCAAGGTG+TGG - chr4_1:63493901-63493920 None:intergenic 50.0%
CCTGACCAGGAACTATAACC+GGG + chr4_1:63494118-63494137 Msa0563190:intron 50.0%
ATCCACCCGGTTATAGTTCC+TGG - chr4_1:63494126-63494145 None:intergenic 50.0%
CATGGTTCCGCTTCTTGTGT+AGG + chr4_1:63494175-63494194 Msa0563190:intron 50.0%
CATATGCAGTCGTTTCCTGC+GGG + chr4_1:63494605-63494624 Msa0563190:intron 50.0%
TCACCTTTATATCTGCCCGC+AGG - chr4_1:63494623-63494642 None:intergenic 50.0%
CTGGTAATCCCCAGAGAAAC+AGG - chr4_1:63494723-63494742 None:intergenic 50.0%
! CTGTTTCTCTGGGGATTACC+AGG + chr4_1:63494721-63494740 Msa0563190:intron 50.0%
TTACACCAAGAGCTGTTGCG+AGG + chr4_1:63494774-63494793 Msa0563190:CDS 50.0%
TACACCAAGAGCTGTTGCGA+GGG + chr4_1:63494775-63494794 Msa0563190:CDS 50.0%
ATTACCCTCGCAACAGCTCT+TGG - chr4_1:63494782-63494801 None:intergenic 50.0%
!! TGCATTGATTGAAGGTGGGG+CGG + chr4_1:63495333-63495352 Msa0563190:three_prime_UTR 50.0%
CTTGACCTGGAGTAACAGAC+AGG - chr4_1:63495431-63495450 None:intergenic 50.0%
AGTGAGGGGATGGAAGGGAA+GGG - chr4_1:63487930-63487949 None:intergenic 55.0%
AAGTGAGGGGATGGAAGGGA+AGG - chr4_1:63487931-63487950 None:intergenic 55.0%
GAGCGTCAGACGTTCGTTGT+CGG - chr4_1:63487965-63487984 None:intergenic 55.0%
TCTATCGAAACCCTCCCTGC+CGG + chr4_1:63488005-63488024 Msa0563190:CDS 55.0%
! GTCAAGGCACTAAAAGGCGC+CGG + chr4_1:63488185-63488204 Msa0563190:CDS 55.0%
!! TTTTCGAGAGGGGCAGCTTG+AGG + chr4_1:63488553-63488572 Msa0563190:CDS 55.0%
!!! CTTATTTTGCCGACGGGTGC+TGG + chr4_1:63488611-63488630 Msa0563190:CDS 55.0%
!! AGAAGAGCGCCCGAAATGAG+CGG - chr4_1:63488740-63488759 None:intergenic 55.0%
CGCTCTTCTAAGCAGTGCTC+AGG + chr4_1:63488751-63488770 Msa0563190:CDS 55.0%
! CCACAGGAGCTTTTGTCAGC+AGG - chr4_1:63491187-63491206 None:intergenic 55.0%
CCTGCTGACAAAAGCTCCTG+TGG + chr4_1:63491184-63491203 Msa0563190:CDS 55.0%
! TTTTGGGCAAGGGACACAGC+CGG - chr4_1:63492194-63492213 None:intergenic 55.0%
ACTAGAGCCCCTGCATATGC+AGG + chr4_1:63493325-63493344 Msa0563190:intron 55.0%
CTAGAGCCCCTGCATATGCA+GGG + chr4_1:63493326-63493345 Msa0563190:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr4_1:63493421-63493440 None:intergenic 55.0%
CAGAGTAGGCCAAATTGGCC+AGG - chr4_1:63493562-63493581 None:intergenic 55.0%
GCCTACTCTGCCCTTGTGTA+TGG + chr4_1:63493572-63493591 Msa0563190:intron 55.0%
CCAAGGTGTGGGACTCACAT+AGG - chr4_1:63493889-63493908 None:intergenic 55.0%
CCTATGTGAGTCCCACACCT+TGG + chr4_1:63493886-63493905 Msa0563190:intron 55.0%
CCCGGTTATAGTTCCTGGTC+AGG - chr4_1:63494121-63494140 None:intergenic 55.0%
GACCAGGAACTATAACCGGG+TGG + chr4_1:63494121-63494140 Msa0563190:intron 55.0%
GCTGTTGCGAGGGTAATGCA+CGG + chr4_1:63494785-63494804 Msa0563190:CDS 55.0%
!! GGTGGTGATGGAAGCAGCTA+AGG + chr4_1:63495211-63495230 Msa0563190:CDS 55.0%
!! GCATTGATTGAAGGTGGGGC+GGG + chr4_1:63495334-63495353 Msa0563190:three_prime_UTR 55.0%
! CATTGATTGAAGGTGGGGCG+GGG + chr4_1:63495335-63495354 Msa0563190:three_prime_UTR 55.0%
ATTGATTGAAGGTGGGGCGG+GGG + chr4_1:63495336-63495355 Msa0563190:three_prime_UTR 55.0%
ACATGGCGCGAAACAACTGC+AGG - chr4_1:63495379-63495398 None:intergenic 55.0%
GAGTAACAGACAGGCAGAGG+CGG - chr4_1:63495422-63495441 None:intergenic 55.0%
CTGGAGTAACAGACAGGCAG+AGG - chr4_1:63495425-63495444 None:intergenic 55.0%
CTCTGCCTGTCTGTTACTCC+AGG + chr4_1:63495423-63495442 Msa0563190:three_prime_UTR 55.0%
GTGAGGGGATGGAAGGGAAG+GGG - chr4_1:63487929-63487948 None:intergenic 60.0%
GGAGAAGAATCCGGCAGGGA+GGG - chr4_1:63488018-63488037 None:intergenic 60.0%
TGGAGAAGAATCCGGCAGGG+AGG - chr4_1:63488019-63488038 None:intergenic 60.0%
!! GCACTAAAAGGCGCCGGAGA+AGG + chr4_1:63488191-63488210 Msa0563190:CDS 60.0%
AGGAGATAGGACGTGCCGGA+AGG + chr4_1:63490951-63490970 Msa0563190:intron 60.0%
GGAGATAGGACGTGCCGGAA+GGG + chr4_1:63490952-63490971 Msa0563190:intron 60.0%
ATAGGACGTGCCGGAAGGGA+TGG + chr4_1:63490956-63490975 Msa0563190:CDS 60.0%
TAGGACGTGCCGGAAGGGAT+GGG + chr4_1:63490957-63490976 Msa0563190:CDS 60.0%
GGACAACCTCCCATCCCTTC+CGG - chr4_1:63490969-63490988 None:intergenic 60.0%
CAGCATGGCCAACTCCCAAC+AGG - chr4_1:63491367-63491386 None:intergenic 60.0%
GGCTGTGTCCCTTGCCCAAA+AGG + chr4_1:63492193-63492212 Msa0563190:CDS 60.0%
GCACTGGGTTGCCCTTTGCA+AGG - chr4_1:63493305-63493324 None:intergenic 60.0%
! TGCAGGGGCTCTAGTGCACT+GGG - chr4_1:63493320-63493339 None:intergenic 60.0%
! ATGCAGGGGCTCTAGTGCAC+TGG - chr4_1:63493321-63493340 None:intergenic 60.0%
TCCCGGACCCTGCATATGCA+GGG - chr4_1:63493336-63493355 None:intergenic 60.0%
TTCCCGGACCCTGCATATGC+AGG - chr4_1:63493337-63493356 None:intergenic 60.0%
TGCATATGCAGGGTCCGGGA+AGG + chr4_1:63493336-63493355 Msa0563190:intron 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr4_1:63493337-63493356 Msa0563190:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr4_1:63493338-63493357 Msa0563190:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr4_1:63493353-63493372 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - chr4_1:63493467-63493486 None:intergenic 60.0%
AGCGACTTCCCAGCACCCGT+CGG - chr4_1:63488623-63488642 None:intergenic 65.0%
! AGAGCGCCCGAAATGAGCGG+AGG - chr4_1:63488737-63488756 None:intergenic 65.0%
GCCCCTGCATATGCAGGGTC+CGG + chr4_1:63493331-63493350 Msa0563190:intron 65.0%
CCCGGACCCTGCATATGCAG+GGG - chr4_1:63493335-63493354 None:intergenic 65.0%
CCCCTGCATATGCAGGGTCC+GGG + chr4_1:63493332-63493351 Msa0563190:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr4_1:63493351-63493370 Msa0563190:intron 65.0%
GACGTGCCGGAAGGGATGGG+AGG + chr4_1:63490960-63490979 Msa0563190:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 63487686 63495853 63487686 ID=Msa0563190;Name=Msa0563190
chr4_1 mRNA 63487686 63495853 63487686 ID=Msa0563190-mRNA-1;Parent=Msa0563190;Name=Msa0563190-mRNA-1;_AED=0.12;_eAED=0.12;_QI=43|0.84|0.85|0.95|1|1|20|582|935
chr4_1 exon 63487686 63488772 63487686 ID=Msa0563190-mRNA-1:exon:20157;Parent=Msa0563190-mRNA-1
chr4_1 exon 63488860 63488913 63488860 ID=Msa0563190-mRNA-1:exon:20158;Parent=Msa0563190-mRNA-1
chr4_1 exon 63489123 63489235 63489123 ID=Msa0563190-mRNA-1:exon:20159;Parent=Msa0563190-mRNA-1
chr4_1 exon 63489353 63489569 63489353 ID=Msa0563190-mRNA-1:exon:20160;Parent=Msa0563190-mRNA-1
chr4_1 exon 63489684 63489734 63489684 ID=Msa0563190-mRNA-1:exon:20161;Parent=Msa0563190-mRNA-1
chr4_1 exon 63490004 63490057 63490004 ID=Msa0563190-mRNA-1:exon:20162;Parent=Msa0563190-mRNA-1
chr4_1 exon 63490154 63490228 63490154 ID=Msa0563190-mRNA-1:exon:20163;Parent=Msa0563190-mRNA-1
chr4_1 exon 63490352 63490405 63490352 ID=Msa0563190-mRNA-1:exon:20164;Parent=Msa0563190-mRNA-1
chr4_1 exon 63490822 63490866 63490822 ID=Msa0563190-mRNA-1:exon:20165;Parent=Msa0563190-mRNA-1
chr4_1 exon 63490953 63491047 63490953 ID=Msa0563190-mRNA-1:exon:20166;Parent=Msa0563190-mRNA-1
chr4_1 exon 63491135 63491264 63491135 ID=Msa0563190-mRNA-1:exon:20167;Parent=Msa0563190-mRNA-1
chr4_1 exon 63491852 63491950 63491852 ID=Msa0563190-mRNA-1:exon:20168;Parent=Msa0563190-mRNA-1
chr4_1 exon 63492188 63492243 63492188 ID=Msa0563190-mRNA-1:exon:20169;Parent=Msa0563190-mRNA-1
chr4_1 exon 63492526 63492628 63492526 ID=Msa0563190-mRNA-1:exon:20170;Parent=Msa0563190-mRNA-1
chr4_1 exon 63493388 63493477 63493388 ID=Msa0563190-mRNA-1:exon:20171;Parent=Msa0563190-mRNA-1
chr4_1 exon 63493663 63493791 63493663 ID=Msa0563190-mRNA-1:exon:20172;Parent=Msa0563190-mRNA-1
chr4_1 exon 63494197 63494366 63494197 ID=Msa0563190-mRNA-1:exon:20173;Parent=Msa0563190-mRNA-1
chr4_1 exon 63494614 63494638 63494614 ID=Msa0563190-mRNA-1:exon:20174;Parent=Msa0563190-mRNA-1
chr4_1 exon 63494743 63494858 63494743 ID=Msa0563190-mRNA-1:exon:20175;Parent=Msa0563190-mRNA-1
chr4_1 exon 63495184 63495853 63495184 ID=Msa0563190-mRNA-1:exon:20176;Parent=Msa0563190-mRNA-1
chr4_1 five_prime_UTR 63487686 63487728 63487686 ID=Msa0563190-mRNA-1:five_prime_utr;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63487729 63488772 63487729 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63488860 63488913 63488860 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63489123 63489235 63489123 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63489353 63489569 63489353 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63489684 63489734 63489684 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63490004 63490057 63490004 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63490154 63490228 63490154 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63490352 63490405 63490352 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63490822 63490866 63490822 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63490953 63491047 63490953 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63491135 63491264 63491135 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63491852 63491950 63491852 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63492188 63492243 63492188 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63492526 63492628 63492526 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63493388 63493477 63493388 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63493663 63493791 63493663 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63494197 63494366 63494197 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63494614 63494638 63494614 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63494743 63494858 63494743 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 CDS 63495184 63495271 63495184 ID=Msa0563190-mRNA-1:cds;Parent=Msa0563190-mRNA-1
chr4_1 three_prime_UTR 63495272 63495853 63495272 ID=Msa0563190-mRNA-1:three_prime_utr;Parent=Msa0563190-mRNA-1
Gene Sequence

>Msa0563190

ATGCAGTTTGATTCCGATTCAGATTCCGACGGATCTCACATTTCTTCAACTCCGCCAAGACAACAACCAAGTTCACCATCACCACCAAAACCACCTCTTCCAGTTTCAAACAAAAAATCGAAATCTAAAACCAAACCCTCAAAATCCAATAAACCCCTTCCTAAACCCCCCGAAATTCTTCCCGAACAAGAATCTTTCCCCTTCCCTTCCATCCCCTCACTTCCTTTCAACATCCGACAACGAACGTCTGACGCTCCTTCAACTTCATCTTCTCACTCTATCGAAACCCTCCCTGCCGGATTCTTCTCCAAATCAATTTCATTCTCCAAAATTCGTAAACCCTTACTCAATCTAGAAACTTCCGAAGCTGAACCGGTTGTTGATTCTGCAAAAACTGTAGCGAAATCTGTGAAGAAACATCCTAATTTGATAGGTGCTAGTGTGGTAACGCCGATAGTCAAGGCACTAAAAGGCGCCGGAGAAGGAAATTTTGTGAAATTGAATTTGAACGGGAAGAGGAAAAAGTTTTTGAATAAAGGGTGGAAGAAAAATGGAAAATTTGGTAGTGGTAAAAGGTATTTTAGAAATAGTAATGGCAGCAATAGTGGTAGAAGTAAACGTATAAAATCGGAACACAAAGAAGGCGATGATGATGATGATGAGGAGGAGGATGGTATGGGTGTAGAGAATGCAAAGCAACAGGAAAAGAAGAATGGTTGGGAAAATGAATGCAAAGTGTTGGAGGAGGCTGTGTTAGCAGCAAGAGATGAAGCTTCTGATGAGAATTTGGTGAAGTTGTTGAAATTGATTCATGGTTTTGATTCTTTTCGAGAGGGGCAGCTTGAGGCGATTAAGAATGTGCTTGCTGGGAAATCGACGATGCTTATTTTGCCGACGGGTGCTGGGAAGTCGCTGTGTTATCAGTTGAGTGCGTTGATTTTGCCTGGGATTACGCTTGTTGTTAGTCCTTTGGTAGCTTTGATGATTGATCAGCTTCGACAATTGCCTCCGCTCATTTCGGGCGCTCTTCTAAGCAGTGCTCAGTCATTTGAAGAATCCTCTGAAACACTCAACCAGCTTCGTCAAGGCACAATAAAGGTGCTTTTTGTTTCACCAGAGCGATTCTTGAATGAAGAATTTCTGTCTGTTATCTCTGGTGGGTTAGCCGTCTCACTTGTTGTTATTGATGAAGCACATTGTATATCTGAATGGTCTCACAATTTCCGACCTTCATTCATGAGACTCAGAGCGTCATTACTTCATAAGAGTCTTAATGTAGGTTCTATTCTTGCAATGACAGCAACTGCTACAACCATGACTTTAGATGCCATTATGTCTGCCCTGGATATTCCTTGCACAAATCTTATTCTAAATGCGCACTTAAGGGACAATTTGCGTTTGTCTGTGTCTTTGATAAAAAATAGGCAATCTTCTCCTTTTGCGGAAGTTAAAAGCATCATAGTATACTGCAAATTTCAGTCTGAAACTGATCAAATTAGCAGATATTTGAATGATAACAACATCAAGGCAAAGAGTTATCATAGTGGTATTTCTGCAAAGGAACGTGGCTACGTACAGGAGTTGTTTGGTTCAAACAAGATCAGAGTGGTTGTTGCAACTGTGGCATTTGGCATGGGACTAGATAAAAGAGATGTTGGAGCAGTAATTCATTACAGTTTACCTGGAAGTCTGGAAGAGTATGTACAGGAGATAGGACGTGCCGGAAGGGATGGGAGGTTGTCCTATTGTCACCTATTTTATGATGATGAGATGTATTTCAAACTTCGTAGTCTAATGTACAGTGAAGGAATCGATGAATATGCAGTGAATAAATTTCTGTCTGAAGTGTTTCCTGCTGACAAAAGCTCCTGTGGGAAAATATGTTCGTTAATCAAAGAACCTGCTTCACGCAGGTTTGATATGAAAGAAGAGGTGATTCTCACAGTTTTGACACGCTTGGAGCTGGGTGACGTGCAGTACTTACATTTACTTCCACAGACAAATGCAACGTGTGTTCTGAGTTTTCATATGACTCCGGCTGTGTCCCTTGCCCAAAAGGTTTCTGCTATTGCTGTGATTCTGAAAAGATCTGAAAATAAGCACGGACAATATACTTTTGATATTCCAACTGTGGCAAATGACATGGGGGTCACACCAGTTGAATTAACAAATCAGTTGTATGCCCTAAAGCCTTACCCTGTTTTACACAAGAGGCTGTTTCCAGGACTTGAACCCGTGACCTTTCAGTCACATGACAACAACTTTACCAGTTGCGCCAAGTTTAAGGGAGAAATAACTTATGAAATGAAGGACATGGCCTACTGTTATAGGATTCTGGAAGTCCCAACAGACTTTTTTTCTCTATCAGCAGATATTACACGATGGTTATCAGAAGTTGAAAGTTGTAAGGTACGAAAAATGGATGCAATGTTTAATGCTGCATATTTTGCAGTAAATCTATGTGATAAGATGAACGGTTGCAGTAGTTCTGATCACACTTCATGCTTGCAAAGGATAATATTGGATTACTTTGCTGGAGTTGATAATGCTGATTTCTGCAAGAAAATTGATCAAAGCAGTCGTTTCCTGCGGGCAGATATAAAGGTTTTTCTACAGAGCAATTCGCATGCTCGCTTTACACCAAGAGCTGTTGCGAGGGTAATGCACGGAATTGCAAGCCCAGCCTACCCTTATACAATATGGGGTAAAACCCATTTCTGGGGAAGGTATACCAAGATAGACTTTAAGGTGGTGATGGAAGCAGCTAAGGAAGAACTTAAAAAATTTATTGGAAAAGATTTACTCTAA
Protein sequence

>Msa0563190

MQFDSDSDSDGSHISSTPPRQQPSSPSPPKPPLPVSNKKSKSKTKPSKSNKPLPKPPEILPEQESFPFPSIPSLPFNIRQRTSDAPSTSSSHSIETLPAGFFSKSISFSKIRKPLLNLETSEAEPVVDSAKTVAKSVKKHPNLIGASVVTPIVKALKGAGEGNFVKLNLNGKRKKFLNKGWKKNGKFGSGKRYFRNSNGSNSGRSKRIKSEHKEGDDDDDEEEDGMGVENAKQQEKKNGWENECKVLEEAVLAARDEASDENLVKLLKLIHGFDSFREGQLEAIKNVLAGKSTMLILPTGAGKSLCYQLSALILPGITLVVSPLVALMIDQLRQLPPLISGALLSSAQSFEESSETLNQLRQGTIKVLFVSPERFLNEEFLSVISGGLAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKSLNVGSILAMTATATTMTLDAIMSALDIPCTNLILNAHLRDNLRLSVSLIKNRQSSPFAEVKSIIVYCKFQSETDQISRYLNDNNIKAKSYHSGISAKERGYVQELFGSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPGSLEEYVQEIGRAGRDGRLSYCHLFYDDEMYFKLRSLMYSEGIDEYAVNKFLSEVFPADKSSCGKICSLIKEPASRRFDMKEEVILTVLTRLELGDVQYLHLLPQTNATCVLSFHMTPAVSLAQKVSAIAVILKRSENKHGQYTFDIPTVANDMGVTPVELTNQLYALKPYPVLHKRLFPGLEPVTFQSHDNNFTSCAKFKGEITYEMKDMAYCYRILEVPTDFFSLSADITRWLSEVESCKVRKMDAMFNAAYFAVNLCDKMNGCSSSDHTSCLQRIILDYFAGVDNADFCKKIDQSSRFLRADIKVFLQSNSHARFTPRAVARVMHGIASPAYPYTIWGKTHFWGRYTKIDFKVVMEAAKEELKKFIGKDLL*