AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0700210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0700210 MtrunA17_Chr8g0377041 91.676 913 26 3 1 864 1 912 0.0 1692
Msa0700210 MtrunA17_Chr2g0300871 40.111 359 195 9 260 601 25 380 8.07e-62 223
Msa0700210 MtrunA17_Chr2g0277541 36.338 355 208 6 270 610 401 751 1.45e-60 224
Msa0700210 MtrunA17_Chr1g0192571 36.158 354 196 9 271 603 197 541 8.23e-60 214
Msa0700210 MtrunA17_Chr5g0409101 37.463 339 188 10 272 591 84 417 2.83e-54 201
Msa0700210 MtrunA17_Chr3g0108851 35.756 344 196 8 263 591 2 335 1.04e-50 192
Msa0700210 MtrunA17_Chr1g0192101 32.203 236 141 7 250 471 135 365 5.23e-26 115
Msa0700210 MtrunA17_Chr1g0192101 33.679 193 106 5 491 663 510 700 1.37e-21 100
Msa0700210 MtrunA17_Chr2g0330401 25.076 331 219 8 282 591 122 444 2.82e-15 79.7
Msa0700210 MtrunA17_Chr3g0107851 25.434 346 219 11 282 597 143 479 4.55e-15 79.3
Msa0700210 MtrunA17_Chr2g0293631 22.741 343 237 9 274 596 514 848 9.50e-15 79.0
Msa0700210 MtrunA17_Chr4g0076491 23.298 382 239 15 267 603 296 668 8.71e-14 75.5
Msa0700210 MtrunA17_Chr6g0449911 23.768 345 227 10 274 594 183 515 3.23e-13 73.6
Msa0700210 MtrunA17_Chr1g0200181 22.689 357 203 10 282 592 171 500 7.21e-13 72.4
Msa0700210 MtrunA17_Chr2g0297261 26.829 164 107 2 464 614 238 401 1.37e-12 70.5
Msa0700210 MtrunA17_Chr5g0409981 22.422 446 261 11 211 591 31 456 2.91e-12 70.1
Msa0700210 MtrunA17_Chr3g0121351 23.164 354 234 11 282 602 171 519 4.10e-12 70.1
Msa0700210 MtrunA17_Chr7g0263771 24.222 450 285 14 207 620 75 504 6.34e-12 69.3
Msa0700210 MtrunA17_Chr6g0461751 24.661 369 213 16 267 594 149 493 8.06e-12 68.9
Msa0700210 MtrunA17_Chr1g0157691 23.343 347 213 12 282 592 173 502 2.45e-11 67.4
Msa0700210 MtrunA17_Chr6g0449741 22.740 365 228 14 282 603 275 628 3.35e-11 67.0
Msa0700210 MtrunA17_Chr7g0271121 30.827 133 86 2 470 602 340 466 6.09e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0700210 AT1G27880.1 51.016 935 356 15 3 864 1 906 0.0 841
Msa0700210 AT1G27880.2 50.343 874 332 15 3 803 1 845 0.0 746
Msa0700210 AT4G35740.1 36.691 417 221 12 260 638 19 430 2.34e-62 224
Msa0700210 AT1G10930.1 36.798 356 205 7 270 610 446 796 5.04e-60 223
Msa0700210 AT1G31360.8 38.053 339 186 8 272 591 84 417 2.91e-58 208
Msa0700210 AT1G31360.4 38.053 339 186 8 272 591 84 417 2.91e-58 208
Msa0700210 AT3G05740.2 35.695 367 209 11 254 603 103 459 3.16e-58 208
Msa0700210 AT1G31360.7 38.053 339 186 8 272 591 84 417 4.07e-58 209
Msa0700210 AT1G31360.5 38.053 339 186 8 272 591 84 417 1.11e-57 208
Msa0700210 AT3G05740.1 34.973 366 213 9 254 603 188 544 3.28e-57 207
Msa0700210 AT1G31360.6 38.053 339 186 8 272 591 84 417 3.78e-57 208
Msa0700210 AT1G31360.3 38.053 339 186 8 272 591 118 451 5.68e-57 209
Msa0700210 AT1G31360.1 38.053 339 186 8 272 591 84 417 5.92e-57 209
Msa0700210 AT1G31360.2 37.710 297 161 8 314 591 1 292 3.13e-44 169
Msa0700210 AT4G35740.2 33.134 335 182 11 341 638 8 337 2.14e-37 149
Msa0700210 AT5G27680.5 32.877 219 124 7 268 471 29 239 1.69e-25 113
Msa0700210 AT5G27680.5 34.737 190 102 5 491 659 371 559 2.80e-21 100
Msa0700210 AT5G27680.6 32.877 219 124 7 268 471 159 369 2.16e-25 113
Msa0700210 AT5G27680.1 32.877 219 124 7 268 471 159 369 2.44e-25 113
Msa0700210 AT5G27680.1 34.737 190 102 5 491 659 501 689 3.00e-21 100
Msa0700210 AT5G27680.4 32.877 219 124 7 268 471 159 369 2.44e-25 113
Msa0700210 AT5G27680.4 34.737 190 102 5 491 659 501 689 3.00e-21 100
Msa0700210 AT5G27680.3 32.877 219 124 7 268 471 159 369 2.44e-25 113
Msa0700210 AT5G27680.3 34.737 190 102 5 491 659 501 689 3.00e-21 100
Msa0700210 AT5G27680.2 32.877 219 124 7 268 471 159 369 2.44e-25 113
Msa0700210 AT5G27680.2 34.737 190 102 5 491 659 501 689 3.00e-21 100
Msa0700210 AT4G33370.1 23.754 341 219 10 282 592 124 453 6.08e-15 79.3
Msa0700210 AT5G63120.2 23.599 339 230 9 274 591 184 514 9.59e-15 79.0
Msa0700210 AT1G55150.1 25.816 337 209 10 282 591 126 448 1.87e-14 77.4
Msa0700210 AT1G55150.2 26.140 329 202 10 290 591 159 473 3.88e-14 76.6
Msa0700210 AT1G31970.1 24.416 385 232 11 247 591 105 470 6.69e-14 75.9
Msa0700210 AT3G01540.4 23.782 349 228 11 271 594 174 509 8.40e-14 75.9
Msa0700210 AT3G01540.2 23.782 349 228 11 271 594 174 509 8.40e-14 75.9
Msa0700210 AT3G01540.3 23.782 349 228 11 271 594 174 509 8.40e-14 75.9
Msa0700210 AT3G01540.1 23.782 349 228 11 271 594 174 509 8.69e-14 75.9
Msa0700210 AT5G14610.6 23.757 362 222 14 267 594 171 512 8.35e-13 72.8
Msa0700210 AT5G14610.2 23.757 362 222 14 267 594 171 512 9.27e-13 72.4
Msa0700210 AT5G14610.5 23.757 362 222 14 267 594 179 520 9.93e-13 72.4
Msa0700210 AT2G42520.2 23.547 344 226 11 282 593 186 524 1.23e-12 72.0
Msa0700210 AT2G42520.1 23.547 344 226 11 282 593 186 524 1.23e-12 72.0
Msa0700210 AT2G42520.3 23.547 344 226 11 282 593 186 524 1.23e-12 72.0
Msa0700210 AT5G51280.1 33.051 118 74 1 475 592 390 502 1.63e-12 71.6
Msa0700210 AT5G14610.7 35.238 105 67 1 490 594 278 381 1.76e-12 71.2
Msa0700210 AT5G14610.3 35.238 105 67 1 490 594 278 381 1.76e-12 71.2
Msa0700210 AT5G14610.1 35.238 105 67 1 490 594 477 580 1.78e-12 71.6
Msa0700210 AT3G19760.1 28.049 164 105 2 464 614 240 403 1.92e-12 70.5
Msa0700210 AT2G33730.1 22.432 370 225 13 282 603 340 695 4.10e-12 70.5
Msa0700210 AT3G06480.1 23.324 343 235 9 274 596 454 788 1.07e-11 69.3
Msa0700210 AT1G20920.4 22.124 339 233 12 282 596 556 887 4.12e-11 67.8
Msa0700210 AT1G20920.6 22.124 339 233 12 282 596 556 887 4.12e-11 67.8
Msa0700210 AT1G20920.3 22.124 339 233 12 282 596 556 887 4.12e-11 67.8
Msa0700210 AT1G20920.7 22.124 339 233 12 282 596 556 887 4.12e-11 67.8
Msa0700210 AT1G20920.5 22.124 339 233 12 282 596 556 887 4.12e-11 67.8
Msa0700210 AT1G20920.1 22.124 339 233 12 282 596 556 887 4.12e-11 67.8
Msa0700210 AT1G20920.2 22.124 339 233 12 282 596 218 549 5.43e-11 67.0

Find 217 sgRNAs with CRISPR-Local

Find 574 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATCATTCATTATTGTATA+TGG 0.189476 4_4:-71103320 None:intergenic
GAGTAAGGGTTTACGAATTT+TGG 0.198750 4_4:-71095722 None:intergenic
CAATTGCCTCCGCTCATTTC+GGG 0.221496 4_4:+71096402 Msa0700210:CDS
ATGCTTGCAAAGGATAATAT+TGG 0.238086 4_4:+71101971 Msa0700210:CDS
TTCTTGTTCGGGAATAATTT+CGG 0.253382 4_4:-71095566 None:intergenic
CAGCCTACCCTTATACAATA+TGG 0.255516 4_4:+71102501 Msa0700210:CDS
CAGCAATAGCAGAAACCTTT+TGG 0.258260 4_4:-71099884 None:intergenic
ACATCTCATCATCATAAAAT+AGG 0.269389 4_4:-71098673 None:intergenic
GTATACCAAGATAGACTTTA+AGG 0.273733 4_4:+71102871 Msa0700210:CDS
CATAGTATACTGCAAATTTC+AGG 0.277071 4_4:+71097387 Msa0700210:CDS
GAAAATTTGGTAGTGGTAAA+AGG 0.277686 4_4:+71095950 Msa0700210:CDS
TGAAGCTTCTGATGAGAATT+TGG 0.290524 4_4:+71096170 Msa0700210:CDS
TTTGGAGAATGAAATTGATT+TGG 0.292930 4_4:-71095704 None:intergenic
ATAATATTGGATTACTTTGC+TGG 0.294888 4_4:+71101984 Msa0700210:CDS
ACAATTGCCTCCGCTCATTT+CGG 0.302918 4_4:+71096401 Msa0700210:CDS
TCGACTAATCCAAACCTTTA+GGG 0.310744 4_4:-71100297 None:intergenic
TATGGGGTAAAACCCATTTC+TGG 0.313223 4_4:+71102519 Msa0700210:CDS
TAAGGGACTCGGTGCAAATT+TGG 0.316268 4_4:-71102975 None:intergenic
AACTGATTTGTTAATTCAAC+TGG 0.319696 4_4:-71100269 None:intergenic
ACACTAGCACCTATCAAATT+AGG 0.325281 4_4:-71095817 None:intergenic
TCTTGTTCGGGAATAATTTC+GGG 0.325867 4_4:-71095565 None:intergenic
CCGATAGTCAAGGCACTAAA+AGG 0.332420 4_4:+71095847 Msa0700210:CDS
TTATTCTAAATGCGCACTTA+AGG 0.353628 4_4:+71097179 Msa0700210:CDS
TGTGCAAAACAGTTAGTATA+AGG 0.357396 4_4:+71103417 Msa0700210:three_prime_UTR
ATCAACAACCGGTTCGGCTT+CGG 0.359769 4_4:-71095758 None:intergenic
CAATGCACAGATGTCTTTAC+TGG 0.362390 4_4:-71102998 None:intergenic
GGCTGTGTCCCTTGCCCAAA+AGG 0.373276 4_4:+71099869 Msa0700210:CDS
GAAACTGGAAGAGGTGGTTT+TGG 0.373861 4_4:-71095481 None:intergenic
AATCATTCATTATTGTATAT+GGG 0.376821 4_4:-71103319 None:intergenic
CATTGATTGAAGGTGGGGCG+GGG 0.382722 4_4:+71103016 Msa0700210:three_prime_UTR
ACATACTCTTCCAGACTTCC+AGG 0.383363 4_4:-71098516 None:intergenic
TATTCTAAATGCGCACTTAA+GGG 0.388305 4_4:+71097180 Msa0700210:CDS
GGAAGTTTCTAGATTGAGTA+AGG 0.388344 4_4:-71095737 None:intergenic
GGGTTTAGGAAGGGGTTTAT+TGG 0.388852 4_4:-71095542 None:intergenic
AAGGGGAAAGATTCTTGTTC+GGG 0.395512 4_4:-71095577 None:intergenic
CATTATATGTGCGACCTAGA+TGG 0.396685 4_4:+71103163 Msa0700210:three_prime_UTR
TTACAGTTTACCTGGAAGTC+TGG 0.398808 4_4:+71098506 Msa0700210:CDS
TACGCTTGTTGTTAGTCCTT+TGG 0.400050 4_4:+71096353 Msa0700210:CDS
GGTGAACTTGGTTGTTGTCT+TGG 0.401617 4_4:-71095451 None:intergenic
GCGATTAAGAATGTGCTTGC+TGG 0.402170 4_4:+71096249 Msa0700210:CDS
TTTGTGAAATTGAATTTGAA+TGG 0.407525 4_4:+71095886 Msa0700210:CDS
AAGAAACATCCTAATTTGAT+AGG 0.411502 4_4:+71095808 Msa0700210:CDS
GCATTGATTGAAGGTGGGGC+GGG 0.412840 4_4:+71103015 Msa0700210:three_prime_UTR
AATATCCAGGGCAGACATAA+TGG 0.413104 4_4:-71097143 None:intergenic
GAGTGAGAAGATGAAGTTGA+AGG 0.417070 4_4:-71095652 None:intergenic
AAATCAGTTGTATGCCCTAA+AGG 0.419124 4_4:+71100283 Msa0700210:CDS
GTTGTTGCAACTGTGGCATT+TGG 0.419325 4_4:+71098026 Msa0700210:CDS
TTCTGTCTGTTATCTCTGGT+GGG 0.425312 4_4:+71096837 Msa0700210:CDS
GAATTTCTGTCTGTTATCTC+TGG 0.426044 4_4:+71096833 Msa0700210:CDS
AGCCTACCCTTATACAATAT+GGG 0.426403 4_4:+71102502 Msa0700210:CDS
TTTCCTGCGGGCAGATATAA+AGG 0.426465 4_4:+71102299 Msa0700210:CDS
GCTTCGTCAAGGCACAATAA+AGG 0.426914 4_4:+71096566 Msa0700210:CDS
TAGAAGTAAACGTATAAAAT+CGG 0.428317 4_4:+71096014 Msa0700210:CDS
AGAAACTTCCGAAGCCGAAC+CGG 0.431878 4_4:+71095750 Msa0700210:CDS
CGCTGCCTGTCTGTTACTCC+AGG 0.432791 4_4:+71103104 Msa0700210:three_prime_UTR
GTGAGGGGATGGAAGGGAAG+GGG 0.436156 4_4:-71095594 None:intergenic
TTTCTGTCTGTTATCTCTGG+TGG 0.437888 4_4:+71096836 Msa0700210:CDS
TGCAGAATCAACAACCGGTT+CGG 0.440717 4_4:-71095764 None:intergenic
AACTAATCCCTCAGGTCAAA+AGG 0.442552 4_4:+71103248 Msa0700210:three_prime_UTR
CCCATGTCATTTGCCACAGT+TGG 0.444192 4_4:-71100239 None:intergenic
TGATGAGGAGGAGGATGGTA+TGG 0.445277 4_4:+71096059 Msa0700210:CDS
AAGTGAGGGGATGGAAGGGA+AGG 0.445403 4_4:-71095596 None:intergenic
CATATTGTATAAGGGTAGGC+TGG 0.448678 4_4:-71102500 None:intergenic
AAGTTGTTGAAATTGATTCA+TGG 0.451160 4_4:+71096195 Msa0700210:CDS
ATCATAAAATAGGTGACAAT+AGG 0.453000 4_4:-71098663 None:intergenic
GGACAACCTCCCATCCCTTC+CGG 0.453112 4_4:-71098642 None:intergenic
TTTCACAAAATTTCCTTCTC+CGG 0.455225 4_4:-71095872 None:intergenic
GGACTAGATAAAAGAGATGT+TGG 0.458565 4_4:+71098053 Msa0700210:CDS
CACCACCTTAAAGTCTATCT+TGG 0.460065 4_4:-71102876 None:intergenic
TGTTGAGAATGCAAAGCAAC+AGG 0.462500 4_4:+71096083 Msa0700210:CDS
GGCTACGTACAGGAGTTGTT+TGG 0.463664 4_4:+71097861 Msa0700210:CDS
GAAGGGGAAAGATTCTTGTT+CGG 0.466450 4_4:-71095578 None:intergenic
ATAGGACGTGCCGGAAGGGA+TGG 0.469051 4_4:+71098632 Msa0700210:CDS
CACAGATGTCTTTACTGGTA+AGG 0.469053 4_4:-71102993 None:intergenic
GTTCGTTGTCGGATGTTGAA+AGG 0.469108 4_4:-71095619 None:intergenic
AATTGATTTGGAGAAGAATC+CGG 0.470308 4_4:-71095692 None:intergenic
AATAGTAATGGCAGCAATAG+TGG 0.470939 4_4:+71095982 Msa0700210:CDS
TGCAACTGTGGCATTTGGCA+TGG 0.471083 4_4:+71098031 Msa0700210:CDS
AGATCCGTCGGAGTCTGAAT+CGG 0.477155 4_4:-71095410 None:intergenic
AAAGGAAGTGAGGGGATGGA+AGG 0.478336 4_4:-71095601 None:intergenic
CGCTCTTCTAAGCAGTGCTC+AGG 0.478699 4_4:+71096425 Msa0700210:CDS
AGTGAGGGGATGGAAGGGAA+GGG 0.479047 4_4:-71095595 None:intergenic
ATTACCCTCGCAACAGCTCT+TGG 0.487754 4_4:-71102461 None:intergenic
TCTTCATTCAAGAATCGCTC+TGG 0.488566 4_4:-71096812 None:intergenic
AAGGAAGTGAGGGGATGGAA+GGG 0.488949 4_4:-71095600 None:intergenic
ATATCAAACCTGCGTGAAGC+AGG 0.492622 4_4:-71098908 None:intergenic
GAATGGGCATTGTAGGAGAT+AGG 0.495642 4_4:+71098614 Msa0700210:intron
TAGGACGTGCCGGAAGGGAT+GGG 0.496615 4_4:+71098633 Msa0700210:CDS
TCCCTCAGGTCAAAAGGAAA+AGG 0.497113 4_4:+71103254 Msa0700210:three_prime_UTR
ATTGATTGAAGGTGGGGCGG+GGG 0.498392 4_4:+71103017 Msa0700210:three_prime_UTR
GCAACTGTGGCATTTGGCAT+GGG 0.498488 4_4:+71098032 Msa0700210:CDS
TTTGGCGGTGATGGTGAACT+TGG 0.500420 4_4:-71095463 None:intergenic
CGATTAAGAATGTGCTTGCT+GGG 0.501188 4_4:+71096250 Msa0700210:CDS
GAGCGTCAGACGTTCGTTGT+CGG 0.501622 4_4:-71095630 None:intergenic
TTGTGAAATTGAATTTGAAT+GGG 0.503178 4_4:+71095887 Msa0700210:CDS
AGATGCCATTATGTCTGCCC+TGG 0.503557 4_4:+71097138 Msa0700210:CDS
GTCTTTACTGGTAAGGGACT+CGG 0.505202 4_4:-71102986 None:intergenic
TTATAGAATGAAAGACCTAC+TGG 0.506852 4_4:+71097324 Msa0700210:intron
GATCGGAGAAGAAGAACAAA+GGG 0.512824 4_4:-71095368 None:intergenic
AACAGGAAAAGAAGAATGGT+TGG 0.514174 4_4:+71096100 Msa0700210:CDS
TCCAACTGTGGCAAATGACA+TGG 0.515681 4_4:+71100238 Msa0700210:CDS
GTTGAAAGGAAGTGAGGGGA+TGG 0.516695 4_4:-71095605 None:intergenic
ATCCTTGATTCCTTCCATCT+AGG 0.520433 4_4:-71103177 None:intergenic
GGTGGTGATGGAAGCAGCTA+AGG 0.525244 4_4:+71102892 Msa0700210:CDS
AATTGAATTTGAATGGGAAG+AGG 0.525991 4_4:+71095893 Msa0700210:CDS
GATAGACTTTAAGGTGGTGA+TGG 0.527217 4_4:+71102880 Msa0700210:CDS
GCAAGAAAATTGATCAAAGC+AGG 0.527941 4_4:+71102027 Msa0700210:CDS
TGCATTGATTGAAGGTGGGG+CGG 0.528493 4_4:+71103014 Msa0700210:three_prime_UTR
ATCACACTTCATGCTTGCAA+AGG 0.529036 4_4:+71101961 Msa0700210:CDS
GAACTTGGTTGTTGTCTTGG+CGG 0.531364 4_4:-71095448 None:intergenic
ATCATTCATTATTGTATATG+GGG 0.531507 4_4:-71103318 None:intergenic
GCACTAAAAGGTGCCGGAGA+AGG 0.531586 4_4:+71095859 Msa0700210:CDS
GTTGTAGAAACTAATCCCTC+AGG 0.534801 4_4:+71103240 Msa0700210:three_prime_UTR
GGAGAAGAATCCGGCAGGGA+GGG 0.536997 4_4:-71095683 None:intergenic
CGGATGTTGAAAGGAAGTGA+GGG 0.537562 4_4:-71095610 None:intergenic
CTATTGCTGTGATTCTGAAA+AGG 0.538068 4_4:+71099898 Msa0700210:CDS
TTGTTTGAAACTGGAAGAGG+TGG 0.539207 4_4:-71095487 None:intergenic
ACAGGAAAAGAAGAATGGTT+GGG 0.539988 4_4:+71096101 Msa0700210:CDS
GTCAAGGCACTAAAAGGTGC+CGG 0.540636 4_4:+71095853 Msa0700210:CDS
CCTGCTGACAAAAGCTCCTG+TGG 0.542681 4_4:+71098860 Msa0700210:CDS
TCATAGTGGTATTTCTGCAA+AGG 0.548833 4_4:+71097833 Msa0700210:CDS
CTTCATAAGAGTCTTAATGT+AGG 0.549838 4_4:+71097073 Msa0700210:CDS
GACCTAGATGGAAGGAATCA+AGG 0.549875 4_4:+71103175 Msa0700210:three_prime_UTR
GATTTGTGCAAGGAATATCC+AGG 0.550259 4_4:-71097156 None:intergenic
TTATTGTGCCTTGACGAAGC+TGG 0.551129 4_4:-71096563 None:intergenic
GTAATTCATTACAGTTTACC+TGG 0.551307 4_4:+71098498 Msa0700210:CDS
AAATGAATGCAAAGTGTTGG+AGG 0.552542 4_4:+71096125 Msa0700210:CDS
AAAGGAACGTGGCTACGTAC+AGG 0.554701 4_4:+71097851 Msa0700210:CDS
AACTTCGTAGTCTAATGTAC+AGG 0.555989 4_4:+71098702 Msa0700210:CDS
TCTAGGTCGCACATATAATG+AGG 0.557415 4_4:-71103160 None:intergenic
TCGGATGTTGAAAGGAAGTG+AGG 0.557472 4_4:-71095611 None:intergenic
CATACGCAGTCGTTTCCTGC+GGG 0.558788 4_4:+71102287 Msa0700210:intron
CTGGAGTAACAGACAGGCAG+CGG 0.559802 4_4:-71103103 None:intergenic
GACATCTGTGCATTGATTGA+AGG 0.562300 4_4:+71103006 Msa0700210:three_prime_UTR
TAATTTGATAGGTGCTAGTG+TGG 0.562653 4_4:+71095819 Msa0700210:CDS
ATATTGTATAAGGGTAGGCT+GGG 0.562876 4_4:-71102499 None:intergenic
CGATGATGATGATGAGGAGG+AGG 0.563127 4_4:+71096050 Msa0700210:CDS
ATCATTTAGAGTTATCATAG+TGG 0.565678 4_4:+71097819 Msa0700210:intron
AAGCAACAGGAAAAGAAGAA+TGG 0.566070 4_4:+71096096 Msa0700210:CDS
GATGAGGAGGAGGATGGTAT+GGG 0.566294 4_4:+71096060 Msa0700210:CDS
AGGCGATGATGATGATGAGG+AGG 0.566831 4_4:+71096047 Msa0700210:CDS
ATAAAATCGGAACACAAAGA+AGG 0.567266 4_4:+71096027 Msa0700210:CDS
TTTGAATGATAACAACATCA+AGG 0.569180 4_4:+71097704 Msa0700210:CDS
GGAAAATGAATGCAAAGTGT+TGG 0.569609 4_4:+71096122 Msa0700210:CDS
CTCGGTGCAAATTTGGCAGA+TGG 0.570380 4_4:-71102968 None:intergenic
TCTATCGAAACCCTCCCTGC+CGG 0.570984 4_4:+71095673 Msa0700210:CDS
GGATCGGAGAAGAAGAACAA+AGG 0.573245 4_4:-71095369 None:intergenic
GCTCTGAGTCTCATGAATGA+AGG 0.573682 4_4:-71097043 None:intergenic
ATCAATAACAACAAGTGAGA+CGG 0.574473 4_4:-71096864 None:intergenic
ACCCCATATTGTATAAGGGT+AGG 0.574497 4_4:-71102504 None:intergenic
TGAAGAAATGTGAGATCCGT+CGG 0.576644 4_4:-71095422 None:intergenic
CTTGTTCGGGAATAATTTCG+GGG 0.580017 4_4:-71095564 None:intergenic
GATTTGGAGAAGAATCCGGC+AGG 0.580592 4_4:-71095688 None:intergenic
TGTGGGAACGCCGATAGTCA+AGG 0.581468 4_4:+71095837 Msa0700210:CDS
GAGAAGAAGAACAAAGGGAA+AGG 0.582175 4_4:-71095363 None:intergenic
TTCAGATCTGAAAATAAGCA+CGG 0.583131 4_4:+71100197 Msa0700210:intron
AGAAGAAGAACAAAGGGAAA+GGG 0.583287 4_4:-71095362 None:intergenic
CATAATGGCATCTAAAGTCA+TGG 0.585243 4_4:-71097128 None:intergenic
ACAGATGTCTTTACTGGTAA+GGG 0.586297 4_4:-71102992 None:intergenic
GGAGATAGGACGTGCCGGAA+GGG 0.586499 4_4:+71098628 Msa0700210:intron
AAGCTGGTTGAGTGTTTCAG+AGG 0.587339 4_4:-71096547 None:intergenic
AAGTCTGGAAGAGTATGTAC+AGG 0.589387 4_4:+71098521 Msa0700210:CDS
CCAACTGTGGCAAATGACAT+GGG 0.590683 4_4:+71100239 Msa0700210:CDS
GATGATGATGAGGAGGAGGA+TGG 0.591373 4_4:+71096054 Msa0700210:CDS
GAAGTTTCTAGATTGAGTAA+GGG 0.593349 4_4:-71095736 None:intergenic
CTGCTGACAAAAGCTCCTGT+GGG 0.597436 4_4:+71098861 Msa0700210:CDS
AAGCACATTGTATATCTGAA+TGG 0.600670 4_4:+71096888 Msa0700210:CDS
TGATAACAACATCAAGGCAA+AGG 0.601528 4_4:+71097710 Msa0700210:CDS
TTGTAGGAGATAGGACGTGC+CGG 0.602571 4_4:+71098623 Msa0700210:intron
AGGAGATAGGACGTGCCGGA+AGG 0.602725 4_4:+71098627 Msa0700210:intron
GACGTGCCGGAAGGGATGGG+AGG 0.603769 4_4:+71098636 Msa0700210:CDS
TTACACCAAGAGCTGTTGCG+AGG 0.607759 4_4:+71102456 Msa0700210:CDS
TTTAGAATAAGATTTGTGCA+AGG 0.610553 4_4:-71097166 None:intergenic
TATGAAGGTTGTTGCAACTG+TGG 0.610759 4_4:+71098019 Msa0700210:intron
TACACCAAGAGCTGTTGCGA+GGG 0.610987 4_4:+71102457 Msa0700210:CDS
AATCTATGTGATAAGATGAA+CGG 0.611074 4_4:+71101924 Msa0700210:CDS
GCCTACCCTTATACAATATG+GGG 0.613022 4_4:+71102503 Msa0700210:CDS
TGAGTCTCATGAATGAAGGT+CGG 0.613163 4_4:-71097039 None:intergenic
ATCTGTGCATTGATTGAAGG+TGG 0.614434 4_4:+71103009 Msa0700210:three_prime_UTR
CTTGACCTGGAGTAACAGAC+AGG 0.614454 4_4:-71103109 None:intergenic
TCTGTGCATTGATTGAAGGT+GGG 0.615355 4_4:+71103010 Msa0700210:three_prime_UTR
TCAAAGAACCTGCTTCACGC+AGG 0.615491 4_4:+71098900 Msa0700210:CDS
AGAAGGCGATGATGATGATG+AGG 0.617816 4_4:+71096044 Msa0700210:CDS
CAGGTTTGATATGAAAGAAG+AGG 0.626887 4_4:+71098919 Msa0700210:CDS
CAACTGTGGCAAATGACATG+GGG 0.630786 4_4:+71100240 Msa0700210:CDS
TCACCTTTATATCTGCCCGC+AGG 0.632718 4_4:-71102302 None:intergenic
ACATGGCGCGAAACAACTGC+AGG 0.634740 4_4:-71103057 None:intergenic
TCAATCATCAAAGCTACCAA+AGG 0.636069 4_4:-71096369 None:intergenic
ACACTCAACCAGCTTCGTCA+AGG 0.636248 4_4:+71096555 Msa0700210:CDS
AGAAGAGCGCCCGAAATGAG+CGG 0.636804 4_4:-71096411 None:intergenic
CTAGGTCGCACATATAATGA+GGG 0.638576 4_4:-71103159 None:intergenic
TTGTTCGGGAATAATTTCGG+GGG 0.640718 4_4:-71095563 None:intergenic
GGTATTTCTGCAAAGGAACG+TGG 0.641724 4_4:+71097840 Msa0700210:CDS
ATATGTGCGACCTAGATGGA+AGG 0.643950 4_4:+71103167 Msa0700210:three_prime_UTR
AGGGATTAGTTTCTACAACA+AGG 0.644393 4_4:-71103236 None:intergenic
GAGTAACAGACAGGCAGCGG+CGG 0.644678 4_4:-71103100 None:intergenic
AGAAGAACAAAGGGAAAGGG+TGG 0.649089 4_4:-71095359 None:intergenic
ACACACGTTGCATTTGTCTG+TGG 0.649253 4_4:-71099588 None:intergenic
CTGTGCATTGATTGAAGGTG+GGG 0.649957 4_4:+71103011 Msa0700210:three_prime_UTR
AGCGACTTCCCAGCACCCGT+CGG 0.662358 4_4:-71096294 None:intergenic
CTAACAACAAGCGTAATCCC+AGG 0.664152 4_4:-71096345 None:intergenic
ATTTGGAGAAGAATCCGGCA+GGG 0.667823 4_4:-71095687 None:intergenic
AAGACTTCATAAGCACCAGT+AGG 0.669892 4_4:-71097339 None:intergenic
ACATACGCAGTCGTTTCCTG+CGG 0.674845 4_4:+71102286 Msa0700210:intron
ATTTGTGCAAGGAATATCCA+GGG 0.675764 4_4:-71097155 None:intergenic
TGGAGAAGAATCCGGCAGGG+AGG 0.677448 4_4:-71095684 None:intergenic
AATTTGATAGGTGCTAGTGT+GGG 0.681239 4_4:+71095820 Msa0700210:CDS
AGAGCGCCCGAAATGAGCGG+AGG 0.689601 4_4:-71096408 None:intergenic
TGTTCGGGAATAATTTCGGG+GGG 0.690236 4_4:-71095562 None:intergenic
GCTGTTGCGAGGGTAATGCA+CGG 0.692274 4_4:+71102467 Msa0700210:CDS
AACTGTGGCAAATGACATGG+GGG 0.692492 4_4:+71100241 Msa0700210:CDS
AATTTCAACAGTGAATAACA+TGG 0.699307 4_4:-71103074 None:intergenic
GATTCCGATTCAGACTCCGA+CGG 0.702398 4_4:+71095406 Msa0700210:CDS
TGAATGCAAAGTGTTGGAGG+AGG 0.703820 4_4:+71096128 Msa0700210:CDS
TACCAAGATAGACTTTAAGG+TGG 0.711526 4_4:+71102874 Msa0700210:CDS
GGATGTTGAAAGGAAGTGAG+GGG 0.717854 4_4:-71095609 None:intergenic
TGGTTCAAACAAGATCAGAG+TGG 0.733769 4_4:+71097881 Msa0700210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATCTATATTTATATATATG+TGG + chr4_4:71097620-71097639 Msa0700210:intron 10.0%
!! ATCTATATTTATATATATGT+GGG + chr4_4:71097621-71097640 Msa0700210:intron 10.0%
!!! AAATTTTTAAATTGCAAAAT+GGG + chr4_4:71098306-71098325 Msa0700210:intron 10.0%
!!! TTTTTCTTATTAAATAGAAT+GGG + chr4_4:71098598-71098617 Msa0700210:intron 10.0%
!! TAAACATATATTAAATTTCT+TGG + chr4_4:71099927-71099946 Msa0700210:intron 10.0%
!!! GTTTAATTTGAAAATTTTAA+GGG - chr4_4:71100573-71100592 None:intergenic 10.0%
!!! AGTTTAATTTGAAAATTTTA+AGG - chr4_4:71100574-71100593 None:intergenic 10.0%
!!! TATATGATCTTAAATTTTTT+TGG + chr4_4:71102126-71102145 Msa0700210:intron 10.0%
!!! ATATGATCTTAAATTTTTTT+GGG + chr4_4:71102127-71102146 Msa0700210:intron 10.0%
!!! TTATATTTTGAAATTCTTAC+AGG + chr4_4:71097005-71097024 Msa0700210:intron 15.0%
!!! ATTTTTCAATTTTAAGGTAT+TGG + chr4_4:71097426-71097445 Msa0700210:intron 15.0%
!!! TTTTTCAATTTTAAGGTATT+GGG + chr4_4:71097427-71097446 Msa0700210:intron 15.0%
!!! CAAATTTTTAAATTGCAAAA+TGG + chr4_4:71098305-71098324 Msa0700210:intron 15.0%
!!! AATTTTTAAATTGCAAAATG+GGG + chr4_4:71098307-71098326 Msa0700210:intron 15.0%
!!! GTTTTTCTTATTAAATAGAA+TGG + chr4_4:71098597-71098616 Msa0700210:intron 15.0%
!!! TGATAGAGTTTTATTTTTTA+TGG + chr4_4:71099340-71099359 Msa0700210:intron 15.0%
!! TTAAACCATAGTATAATTTA+CGG + chr4_4:71099714-71099733 Msa0700210:intron 15.0%
!!! TGGCTTATATTTTTAATTTT+TGG + chr4_4:71099830-71099849 Msa0700210:intron 15.0%
!!! TTTTCAAATTAAACTAAGAA+TGG + chr4_4:71100579-71100598 Msa0700210:intron 15.0%
!! ATTGTAGTATTTATATTTAG+AGG + chr4_4:71101480-71101499 Msa0700210:intron 15.0%
!!! ATATTTTATATCATTCATCT+AGG + chr4_4:71102804-71102823 Msa0700210:intron 15.0%
!! GAAGAACTTAAAAAATTTAT+TGG + chr4_4:71102914-71102933 Msa0700210:CDS 15.0%
!! AATCATTCATTATTGTATAT+GGG - chr4_4:71103322-71103341 None:intergenic 15.0%
!!! TGATTCTACTTTTTTTTTTT+AGG + chr4_4:71103337-71103356 Msa0700210:three_prime_UTR 15.0%
!!! GATTCTACTTTTTTTTTTTA+GGG + chr4_4:71103338-71103357 Msa0700210:three_prime_UTR 15.0%
!! TTTGTGAAATTGAATTTGAA+TGG + chr4_4:71095886-71095905 Msa0700210:CDS 20.0%
!! TTGTGAAATTGAATTTGAAT+GGG + chr4_4:71095887-71095906 Msa0700210:CDS 20.0%
!!! AGGAAAAAGTTTTTGAATAA+AGG + chr4_4:71095913-71095932 Msa0700210:CDS 20.0%
!!! GGAAAAAGTTTTTGAATAAA+GGG + chr4_4:71095914-71095933 Msa0700210:CDS 20.0%
!!! AGGTATTTTAGAAATAGTAA+TGG + chr4_4:71095970-71095989 Msa0700210:CDS 20.0%
!! TAGAAGTAAACGTATAAAAT+CGG + chr4_4:71096014-71096033 Msa0700210:CDS 20.0%
!!! TGAGAATGTTGATTATTTAT+AGG + chr4_4:71096674-71096693 Msa0700210:intron 20.0%
!! ATTGCAATTATAATTCTTAC+AGG + chr4_4:71096775-71096794 Msa0700210:intron 20.0%
!!! ATTATTTCTGTGAGTTAATA+AGG + chr4_4:71096944-71096963 Msa0700210:intron 20.0%
!! TCAAAATATAAAGATCAACA+CGG - chr4_4:71096996-71097015 None:intergenic 20.0%
!!! GACTTCATTTTTCAATTTTA+AGG + chr4_4:71097420-71097439 Msa0700210:intron 20.0%
!!! GATTTTATTTCAAATACTGT+AGG - chr4_4:71097506-71097525 None:intergenic 20.0%
!! GTTATTAAATAATGTGTTTC+AGG + chr4_4:71097543-71097562 Msa0700210:intron 20.0%
!!! TTCTCAAAAGATTTTACTTA+TGG + chr4_4:71098279-71098298 Msa0700210:intron 20.0%
!!! ATTTTTAAATTGCAAAATGG+GGG + chr4_4:71098308-71098327 Msa0700210:intron 20.0%
!! TGTATATTAGAATTGAGTAA+AGG - chr4_4:71098946-71098965 None:intergenic 20.0%
!! CAATTACAAATTCCTAAAAA+TGG - chr4_4:71099202-71099221 None:intergenic 20.0%
!! AAAATTAACAAACACAAGAT+GGG - chr4_4:71099765-71099784 None:intergenic 20.0%
!! AAAAATTAACAAACACAAGA+TGG - chr4_4:71099766-71099785 None:intergenic 20.0%
!!! AAATTTTCTGTTTCTACAAA+GGG + chr4_4:71100040-71100059 Msa0700210:intron 20.0%
!!! AGAATTTTTCACAAATAACA+AGG - chr4_4:71101316-71101335 None:intergenic 20.0%
!! AGAAATAACTTATGAAATGA+AGG + chr4_4:71101347-71101366 Msa0700210:intron 20.0%
!! AGATTGAAAAGTAGTTATTA+TGG + chr4_4:71101731-71101750 Msa0700210:intron 20.0%
!!! ATTTTTGTGTTATTTTCTCA+TGG + chr4_4:71101839-71101858 Msa0700210:intron 20.0%
!!! TTTTTTTGGGTATTGAAAAT+TGG + chr4_4:71102140-71102159 Msa0700210:intron 20.0%
!!! CACTTACAATAATAATTTTG+GGG - chr4_4:71102190-71102209 None:intergenic 20.0%
!!! GCACTTACAATAATAATTTT+GGG - chr4_4:71102191-71102210 None:intergenic 20.0%
!!! TGCACTTACAATAATAATTT+TGG - chr4_4:71102192-71102211 None:intergenic 20.0%
!! TTGTTGGTATGAAATAAATT+GGG + chr4_4:71102579-71102598 Msa0700210:intron 20.0%
!! TTACTTATTGATGTTATTGA+TGG - chr4_4:71102637-71102656 None:intergenic 20.0%
!! AACTTATGAAATAGAAAATC+TGG - chr4_4:71102667-71102686 None:intergenic 20.0%
!! ATTCAATGTTAAACAAAAGT+AGG - chr4_4:71102757-71102776 None:intergenic 20.0%
!! TAACATTGAATGTGTATTAT+TGG + chr4_4:71102766-71102785 Msa0700210:intron 20.0%
!! TAAAACTGAGATTTAAATTG+TGG + chr4_4:71102835-71102854 Msa0700210:intron 20.0%
!! ATCATTCATTATTGTATATG+GGG - chr4_4:71103321-71103340 None:intergenic 20.0%
!! GAATCATTCATTATTGTATA+TGG - chr4_4:71103323-71103342 None:intergenic 20.0%
! TTCCAGTTTCAAACAAAAAA+TGG + chr4_4:71095494-71095513 Msa0700210:CDS 25.0%
!!! TTCCATTTTTTGTTTGAAAC+TGG - chr4_4:71095499-71095518 None:intergenic 25.0%
! TTTGGAGAATGAAATTGATT+TGG - chr4_4:71095707-71095726 None:intergenic 25.0%
! AAGAAACATCCTAATTTGAT+AGG + chr4_4:71095808-71095827 Msa0700210:CDS 25.0%
!! AAAAGTTTTTGAATAAAGGG+TGG + chr4_4:71095917-71095936 Msa0700210:CDS 25.0%
! AAAAATGGAAAATTTGGTAG+TGG + chr4_4:71095943-71095962 Msa0700210:CDS 25.0%
!! AAGTTGTTGAAATTGATTCA+TGG + chr4_4:71096195-71096214 Msa0700210:CDS 25.0%
! TCAAATGTGATATGTGAAAA+TGG - chr4_4:71096700-71096719 None:intergenic 25.0%
!! TTTAGAATAAGATTTGTGCA+AGG - chr4_4:71097169-71097188 None:intergenic 25.0%
! CTGTGTCTTTGATAAAAAAT+AGG + chr4_4:71097218-71097237 Msa0700210:intron 25.0%
! TACGTTAAAAAACTCAGATA+AGG - chr4_4:71097296-71097315 None:intergenic 25.0%
! TTTGAATGATAACAACATCA+AGG + chr4_4:71097704-71097723 Msa0700210:CDS 25.0%
!! ATCATTTAGAGTTATCATAG+TGG + chr4_4:71097819-71097838 Msa0700210:intron 25.0%
!! ACTCAAAAGTCTAAAACATA+AGG - chr4_4:71098222-71098241 None:intergenic 25.0%
! ATCATAAAATAGGTGACAAT+AGG - chr4_4:71098666-71098685 None:intergenic 25.0%
! ACATCTCATCATCATAAAAT+AGG - chr4_4:71098676-71098695 None:intergenic 25.0%
! AAATTTATGATAACCATCTC+AGG + chr4_4:71099092-71099111 Msa0700210:intron 25.0%
!!! TTTGACTAAAAGCCATTTTT+AGG + chr4_4:71099187-71099206 Msa0700210:intron 25.0%
!! CACATTTTTGTACAAAAACA+AGG - chr4_4:71099227-71099246 None:intergenic 25.0%
!!! CTTGTTTTTGTACAAAAATG+TGG + chr4_4:71099225-71099244 Msa0700210:intron 25.0%
!! TTGTACAAAAATGTGGTTTT+TGG + chr4_4:71099232-71099251 Msa0700210:intron 25.0%
! GTGCATATTTATTTCGTAAA+TGG - chr4_4:71099399-71099418 None:intergenic 25.0%
! TAACAAAACTTTCTCTTGTA+AGG + chr4_4:71099426-71099445 Msa0700210:intron 25.0%
! TCAATCCGTAAATTATACTA+TGG - chr4_4:71099722-71099741 None:intergenic 25.0%
! CTTTGTAGAAACAGAAAATT+TGG - chr4_4:71100041-71100060 None:intergenic 25.0%
!!! CAAATTTTCTGTTTCTACAA+AGG + chr4_4:71100039-71100058 Msa0700210:intron 25.0%
!!! AACTGATTTGTTAATTCAAC+TGG - chr4_4:71100272-71100291 None:intergenic 25.0%
!!! CGTAAATCAGTATTTTTAAC+AGG - chr4_4:71100717-71100736 None:intergenic 25.0%
! TTTCCTTGTCTTAAAATCTT+TGG + chr4_4:71100854-71100873 Msa0700210:intron 25.0%
!!! TCTATTTTGACTTTCTAGTT+TGG + chr4_4:71101208-71101227 Msa0700210:intron 25.0%
!!! CTATTTTGACTTTCTAGTTT+GGG + chr4_4:71101209-71101228 Msa0700210:intron 25.0%
! TGTGAAAAATTCTCAGTTTA+AGG + chr4_4:71101323-71101342 Msa0700210:intron 25.0%
! GTGAAAAATTCTCAGTTTAA+GGG + chr4_4:71101324-71101343 Msa0700210:intron 25.0%
! ATAGAGAAAAAAAGTCTGTT+GGG - chr4_4:71101404-71101423 None:intergenic 25.0%
! CTGAGTAAATATAAGAGAAA+TGG - chr4_4:71101669-71101688 None:intergenic 25.0%
! CATTTCTCTTATATTTACTC+AGG + chr4_4:71101667-71101686 Msa0700210:intron 25.0%
!! TATGAACAGTTTTCCTTTTA+CGG + chr4_4:71101701-71101720 Msa0700210:intron 25.0%
! AATCTATGTGATAAGATGAA+CGG + chr4_4:71101924-71101943 Msa0700210:CDS 25.0%
! ATAATATTGGATTACTTTGC+TGG + chr4_4:71101984-71102003 Msa0700210:CDS 25.0%
! AACCTACTTATATGATGATA+AGG + chr4_4:71102211-71102230 Msa0700210:intron 25.0%
! ATCCTTATCATCATATAAGT+AGG - chr4_4:71102216-71102235 None:intergenic 25.0%
!! TTTTACCCCATATTGTATAA+GGG - chr4_4:71102511-71102530 None:intergenic 25.0%
! TTCATACCAACAAGTATTTA+AGG - chr4_4:71102572-71102591 None:intergenic 25.0%
! CTTGTTGGTATGAAATAAAT+TGG + chr4_4:71102578-71102597 Msa0700210:intron 25.0%
!! AAATAAATTGGGTGACTTTT+AGG + chr4_4:71102590-71102609 Msa0700210:intron 25.0%
! TTATTGATGTTATTGATGGA+AGG - chr4_4:71102633-71102652 None:intergenic 25.0%
! TGAAATAGAAAATCTGGAAA+AGG - chr4_4:71102661-71102680 None:intergenic 25.0%
! GTGGAAAAAAATGAAATGAA+TGG - chr4_4:71102733-71102752 None:intergenic 25.0%
! AATTTCAACAGTGAATAACA+TGG - chr4_4:71103077-71103096 None:intergenic 25.0%
!!! TCAAACTGCATTTTTTGGAT+CGG - chr4_4:71095388-71095407 None:intergenic 30.0%
!! TTTTTGTTTGAAACTGGAAG+AGG - chr4_4:71095493-71095512 None:intergenic 30.0%
!! TTTATTGGATTTTGAGGGTT+TGG - chr4_4:71095530-71095549 None:intergenic 30.0%
TTCTTGTTCGGGAATAATTT+CGG - chr4_4:71095569-71095588 None:intergenic 30.0%
!! AATTGATTTGGAGAAGAATC+CGG - chr4_4:71095695-71095714 None:intergenic 30.0%
! GAAGTTTCTAGATTGAGTAA+GGG - chr4_4:71095739-71095758 None:intergenic 30.0%
TTTCACAAAATTTCCTTCTC+CGG - chr4_4:71095875-71095894 None:intergenic 30.0%
AATTGAATTTGAATGGGAAG+AGG + chr4_4:71095893-71095912 Msa0700210:CDS 30.0%
TGGACGAAAAATGGAAAATT+TGG + chr4_4:71095937-71095956 Msa0700210:CDS 30.0%
!! GAAAATTTGGTAGTGGTAAA+AGG + chr4_4:71095950-71095969 Msa0700210:CDS 30.0%
ATAAAATCGGAACACAAAGA+AGG + chr4_4:71096027-71096046 Msa0700210:CDS 30.0%
TTTCTACAAAAGAAGATCCA+AGG - chr4_4:71096622-71096641 None:intergenic 30.0%
ATCAATAACAACAAGTGAGA+CGG - chr4_4:71096867-71096886 None:intergenic 30.0%
AAGCACATTGTATATCTGAA+TGG + chr4_4:71096888-71096907 Msa0700210:CDS 30.0%
ATTGTATATCTGAATGGTGA+GGG + chr4_4:71096894-71096913 Msa0700210:intron 30.0%
AAATATAAAGATCAACACGG+AGG - chr4_4:71096993-71097012 None:intergenic 30.0%
CTTCATAAGAGTCTTAATGT+AGG + chr4_4:71097073-71097092 Msa0700210:CDS 30.0%
TTATTCTAAATGCGCACTTA+AGG + chr4_4:71097179-71097198 Msa0700210:CDS 30.0%
TATTCTAAATGCGCACTTAA+GGG + chr4_4:71097180-71097199 Msa0700210:CDS 30.0%
TTATAGAATGAAAGACCTAC+TGG + chr4_4:71097324-71097343 Msa0700210:intron 30.0%
CATAGTATACTGCAAATTTC+AGG + chr4_4:71097387-71097406 Msa0700210:CDS 30.0%
!!! AATTTTAAGGTATTGGGTCT+CGG + chr4_4:71097433-71097452 Msa0700210:intron 30.0%
GATTTAACATTCAGTGTCAA+GGG - chr4_4:71097782-71097801 None:intergenic 30.0%
AGATTTAACATTCAGTGTCA+AGG - chr4_4:71097783-71097802 None:intergenic 30.0%
!!! TACCTTGCCATTTTTTATGA+AGG + chr4_4:71098004-71098023 Msa0700210:intron 30.0%
AACCTTCATAAAAAATGGCA+AGG - chr4_4:71098009-71098028 None:intergenic 30.0%
GCAACAACCTTCATAAAAAA+TGG - chr4_4:71098014-71098033 None:intergenic 30.0%
GTAATTCATTACAGTTTACC+TGG + chr4_4:71098498-71098517 Msa0700210:CDS 30.0%
! TTAAATAGAATGGGCATTGT+AGG + chr4_4:71098607-71098626 Msa0700210:intron 30.0%
TATTTGGTCTCAAGTTAATC+TGG - chr4_4:71099295-71099314 None:intergenic 30.0%
TTCGTAAATGGATAAATGAC+TGG - chr4_4:71099387-71099406 None:intergenic 30.0%
TCTCCAATATTTCCTTTACT+AGG + chr4_4:71099506-71099525 Msa0700210:intron 30.0%
TCACCTAGTAAAGGAAATAT+TGG - chr4_4:71099512-71099531 None:intergenic 30.0%
CATATTGTACATGCAATTGA+AGG - chr4_4:71099645-71099664 None:intergenic 30.0%
AGCATACAGTTTAGATAAGT+AGG - chr4_4:71099695-71099714 None:intergenic 30.0%
TTGTTTGAGAGATTATTCAG+TGG + chr4_4:71099810-71099829 Msa0700210:intron 30.0%
ATTCTAGTGTGATCACAATA+AGG - chr4_4:71100116-71100135 None:intergenic 30.0%
TTCAGATCTGAAAATAAGCA+CGG + chr4_4:71100197-71100216 Msa0700210:intron 30.0%
! TACTTTTGATATTCCAACTG+TGG + chr4_4:71100226-71100245 Msa0700210:CDS 30.0%
!!! TTTTTTCTCAAGCTTGTATG+TGG + chr4_4:71100330-71100349 Msa0700210:intron 30.0%
TTCTCTCACACTTCATTATT+GGG - chr4_4:71100442-71100461 None:intergenic 30.0%
TTTCTCTCACACTTCATTAT+TGG - chr4_4:71100443-71100462 None:intergenic 30.0%
!! TGGATAAAGCTATTGATTCA+TGG + chr4_4:71100599-71100618 Msa0700210:intron 30.0%
! TTGATAGTAATTCAAACGAC+AGG + chr4_4:71100642-71100661 Msa0700210:intron 30.0%
TGATAGTAATTCAAACGACA+GGG + chr4_4:71100643-71100662 Msa0700210:intron 30.0%
! ATTTTTAACAGGAGTAGTGA+AGG - chr4_4:71100706-71100725 None:intergenic 30.0%
!!! ATGCCAAAGATTTTAAGACA+AGG - chr4_4:71100860-71100879 None:intergenic 30.0%
CTTAAAATCTTTGGCATCAT+AGG + chr4_4:71100863-71100882 Msa0700210:intron 30.0%
GAAACAGTATAATTGTGTTC+TGG + chr4_4:71101276-71101295 Msa0700210:intron 30.0%
AACTTATGAAATGAAGGACA+TGG + chr4_4:71101353-71101372 Msa0700210:intron 30.0%
GATAGAGAAAAAAAGTCTGT+TGG - chr4_4:71101405-71101424 None:intergenic 30.0%
AGATATTACACGATGGTTAT+CGG + chr4_4:71101428-71101447 Msa0700210:intron 30.0%
TCTAACATTCACTCTCTTAT+TGG + chr4_4:71101531-71101550 Msa0700210:intron 30.0%
GTAAAAGGAAAACTGTTCAT+AGG - chr4_4:71101702-71101721 None:intergenic 30.0%
CAATCTTTGAATACCGTAAA+AGG - chr4_4:71101717-71101736 None:intergenic 30.0%
ATGCTTGCAAAGGATAATAT+TGG + chr4_4:71101971-71101990 Msa0700210:CDS 30.0%
TGTTCTTTAGTACAGAACTT+AGG - chr4_4:71102072-71102091 None:intergenic 30.0%
!!! ATAATTTTGGGGCATAAACT+AGG - chr4_4:71102179-71102198 None:intergenic 30.0%
!!! GCTATTTTAGTACAAGATCA+TGG - chr4_4:71102258-71102277 None:intergenic 30.0%
! TGAAAATTACCTGTTTCTCT+GGG + chr4_4:71102393-71102412 Msa0700210:intron 30.0%
! GTTTTACCCCATATTGTATA+AGG - chr4_4:71102512-71102531 None:intergenic 30.0%
!! TTTTTCAACGTACCAGAAAT+GGG - chr4_4:71102534-71102553 None:intergenic 30.0%
!! AGCTTTGATTTGAGAAACAA+AGG + chr4_4:71102689-71102708 Msa0700210:intron 30.0%
!! GCTTTGATTTGAGAAACAAA+GGG + chr4_4:71102690-71102709 Msa0700210:intron 30.0%
ATGTTAAACAAAAGTAGGAG+TGG - chr4_4:71102752-71102771 None:intergenic 30.0%
! AGATTTAAATTGTGGATTGC+AGG + chr4_4:71102843-71102862 Msa0700210:intron 30.0%
! GATTTAAATTGTGGATTGCA+GGG + chr4_4:71102844-71102863 Msa0700210:intron 30.0%
! ATTTAAATTGTGGATTGCAG+GGG + chr4_4:71102845-71102864 Msa0700210:intron 30.0%
GTATACCAAGATAGACTTTA+AGG + chr4_4:71102871-71102890 Msa0700210:CDS 30.0%
TATGGGGAAAAATAAAAGAG+AGG - chr4_4:71103305-71103324 None:intergenic 30.0%
! TATACTAACTGTTTTGCACA+TGG - chr4_4:71103417-71103436 None:intergenic 30.0%
TGTGCAAAACAGTTAGTATA+AGG + chr4_4:71103417-71103436 Msa0700210:three_prime_UTR 30.0%
AGAAGAAGAACAAAGGGAAA+GGG - chr4_4:71095365-71095384 None:intergenic 35.0%
!!! CGGAATCAAACTGCATTTTT+TGG - chr4_4:71095393-71095412 None:intergenic 35.0%
! AGGGGTTTATTGGATTTTGA+GGG - chr4_4:71095535-71095554 None:intergenic 35.0%
! AAGGGGTTTATTGGATTTTG+AGG - chr4_4:71095536-71095555 None:intergenic 35.0%
TCTTGTTCGGGAATAATTTC+GGG - chr4_4:71095568-71095587 None:intergenic 35.0%
! GAGTAAGGGTTTACGAATTT+TGG - chr4_4:71095725-71095744 None:intergenic 35.0%
! GGAAGTTTCTAGATTGAGTA+AGG - chr4_4:71095740-71095759 None:intergenic 35.0%
! GTTTTTGCAGAATCAACAAC+CGG - chr4_4:71095772-71095791 None:intergenic 35.0%
ACACTAGCACCTATCAAATT+AGG - chr4_4:71095820-71095839 None:intergenic 35.0%
TAATTTGATAGGTGCTAGTG+TGG + chr4_4:71095819-71095838 Msa0700210:CDS 35.0%
AATTTGATAGGTGCTAGTGT+GGG + chr4_4:71095820-71095839 Msa0700210:CDS 35.0%
AATAAAGGGTGGACGAAAAA+TGG + chr4_4:71095928-71095947 Msa0700210:CDS 35.0%
AATAGTAATGGCAGCAATAG+TGG + chr4_4:71095982-71096001 Msa0700210:CDS 35.0%
AAGCAACAGGAAAAGAAGAA+TGG + chr4_4:71096096-71096115 Msa0700210:CDS 35.0%
AACAGGAAAAGAAGAATGGT+TGG + chr4_4:71096100-71096119 Msa0700210:CDS 35.0%
ACAGGAAAAGAAGAATGGTT+GGG + chr4_4:71096101-71096120 Msa0700210:CDS 35.0%
GGAAAATGAATGCAAAGTGT+TGG + chr4_4:71096122-71096141 Msa0700210:CDS 35.0%
!! AAATGAATGCAAAGTGTTGG+AGG + chr4_4:71096125-71096144 Msa0700210:CDS 35.0%
TGAAGCTTCTGATGAGAATT+TGG + chr4_4:71096170-71096189 Msa0700210:CDS 35.0%
!!! TGGTTTTGATTCTTTTCGAG+AGG + chr4_4:71096215-71096234 Msa0700210:CDS 35.0%
!!! GGTTTTGATTCTTTTCGAGA+GGG + chr4_4:71096216-71096235 Msa0700210:CDS 35.0%
!!! GTTTTGATTCTTTTCGAGAG+GGG + chr4_4:71096217-71096236 Msa0700210:CDS 35.0%
TCAATCATCAAAGCTACCAA+AGG - chr4_4:71096372-71096391 None:intergenic 35.0%
GAATTTCTGTCTGTTATCTC+TGG + chr4_4:71096833-71096852 Msa0700210:CDS 35.0%
CATTGTATATCTGAATGGTG+AGG + chr4_4:71096893-71096912 Msa0700210:intron 35.0%
! CATAATGGCATCTAAAGTCA+TGG - chr4_4:71097131-71097150 None:intergenic 35.0%
ATTTGTGCAAGGAATATCCA+GGG - chr4_4:71097158-71097177 None:intergenic 35.0%
TCAGATAAGGATAGTTAGAG+GGG - chr4_4:71097283-71097302 None:intergenic 35.0%
CTCAGATAAGGATAGTTAGA+GGG - chr4_4:71097284-71097303 None:intergenic 35.0%
ACTCAGATAAGGATAGTTAG+AGG - chr4_4:71097285-71097304 None:intergenic 35.0%
! TATGAAGTCTTCACCTTTTG+CGG + chr4_4:71097351-71097370 Msa0700210:CDS 35.0%
!!! ATGCTTTTAACTTCCGCAAA+AGG - chr4_4:71097367-71097386 None:intergenic 35.0%
!! TGTGTTTCAGGTTTAGTATG+TGG + chr4_4:71097555-71097574 Msa0700210:intron 35.0%
TGATAACAACATCAAGGCAA+AGG + chr4_4:71097710-71097729 Msa0700210:CDS 35.0%
! TCATAGTGGTATTTCTGCAA+AGG + chr4_4:71097833-71097852 Msa0700210:CDS 35.0%
! AAAAATGGCAAGGTATCAGT+TGG - chr4_4:71097999-71098018 None:intergenic 35.0%
GGACTAGATAAAAGAGATGT+TGG + chr4_4:71098053-71098072 Msa0700210:CDS 35.0%
!! CTGCATTAATTTGCATGAAC+TGG + chr4_4:71098106-71098125 Msa0700210:intron 35.0%
!! AGTGATTCACCGATTCTAAT+TGG + chr4_4:71098162-71098181 Msa0700210:intron 35.0%
!! GTGATTCACCGATTCTAATT+GGG + chr4_4:71098163-71098182 Msa0700210:intron 35.0%
AACTAGAGCCCAATTAGAAT+CGG - chr4_4:71098174-71098193 None:intergenic 35.0%
! AGTCTAAAACATAAGGCACA+AGG - chr4_4:71098215-71098234 None:intergenic 35.0%
AATTGCAAAATGGGGGTAAA+TGG + chr4_4:71098315-71098334 Msa0700210:intron 35.0%
AAAATGGGGGTAAATGGTAT+TGG + chr4_4:71098321-71098340 Msa0700210:intron 35.0%
TTCGCACTACTTATTTGCTT+TGG + chr4_4:71098410-71098429 Msa0700210:intron 35.0%
CCTAAACACAGTTATGACAA+TGG - chr4_4:71098479-71098498 None:intergenic 35.0%
CCATTGTCATAACTGTGTTT+AGG + chr4_4:71098476-71098495 Msa0700210:intron 35.0%
AACTTCGTAGTCTAATGTAC+AGG + chr4_4:71098702-71098721 Msa0700210:CDS 35.0%
! TAACGAACATATTTTCCCAC+AGG - chr4_4:71098879-71098898 None:intergenic 35.0%
CAGGTTTGATATGAAAGAAG+AGG + chr4_4:71098919-71098938 Msa0700210:CDS 35.0%
ACTTTGATAAACCAGATGAG+TGG + chr4_4:71098986-71099005 Msa0700210:intron 35.0%
AGACTTTCATAACATCCTGT+TGG + chr4_4:71099025-71099044 Msa0700210:intron 35.0%
GACTTTCATAACATCCTGTT+GGG + chr4_4:71099026-71099045 Msa0700210:intron 35.0%
!! AATCTTTAAAGCTCCTGAGA+TGG - chr4_4:71099108-71099127 None:intergenic 35.0%
!!! TGGGTTTTAAGCACTAAACA+AGG - chr4_4:71099269-71099288 None:intergenic 35.0%
TCTCAAGTTAATCTGGACAT+GGG - chr4_4:71099288-71099307 None:intergenic 35.0%
CTTGAGACCAAATAAAGCTA+AGG + chr4_4:71099301-71099320 Msa0700210:intron 35.0%
!! AACTGCACCTTAGCTTTATT+TGG - chr4_4:71099311-71099330 None:intergenic 35.0%
ATGGACAACCATCTACTTAT+AGG + chr4_4:71099359-71099378 Msa0700210:intron 35.0%
TTTAATCTGTAGACCTAGTC+TGG - chr4_4:71099481-71099500 None:intergenic 35.0%
!! GTGTGTTCTGAGTTTTCATA+TGG + chr4_4:71099605-71099624 Msa0700210:CDS 35.0%
! AGCAATAGCAGAAACCTTTT+GGG - chr4_4:71099886-71099905 None:intergenic 35.0%
! CTATTGCTGTGATTCTGAAA+AGG + chr4_4:71099898-71099917 Msa0700210:CDS 35.0%
ACAATAACCATCCATTTCAG+GGG - chr4_4:71099973-71099992 None:intergenic 35.0%
CACAATAACCATCCATTTCA+GGG - chr4_4:71099974-71099993 None:intergenic 35.0%
ACACAATAACCATCCATTTC+AGG - chr4_4:71099975-71099994 None:intergenic 35.0%
TAATGTTGTCAACCTCAAGA+TGG + chr4_4:71100007-71100026 Msa0700210:intron 35.0%
!! GAAGAAAAAGTGCCATTAGA+CGG - chr4_4:71100074-71100093 None:intergenic 35.0%
AAATCAGTTGTATGCCCTAA+AGG + chr4_4:71100283-71100302 Msa0700210:CDS 35.0%
TCGACTAATCCAAACCTTTA+GGG - chr4_4:71100300-71100319 None:intergenic 35.0%
ATCGACTAATCCAAACCTTT+AGG - chr4_4:71100301-71100320 None:intergenic 35.0%
GAATCTGCTAAACTATCTTC+AGG - chr4_4:71100508-71100527 None:intergenic 35.0%
GATAGTAATTCAAACGACAG+GGG + chr4_4:71100644-71100663 Msa0700210:intron 35.0%
ATTTGATGCAGGGTAACAAA+GGG - chr4_4:71100673-71100692 None:intergenic 35.0%
CTAATCAGAGATTTGATGCA+GGG - chr4_4:71100683-71100702 None:intergenic 35.0%
ACACACAAACACTACATACT+TGG - chr4_4:71100938-71100957 None:intergenic 35.0%
ATTGAGTTAGAACCTTGCAA+AGG + chr4_4:71100966-71100985 Msa0700210:intron 35.0%
TTGAGTTAGAACCTTGCAAA+GGG + chr4_4:71100967-71100986 Msa0700210:intron 35.0%
AAAAAATATCTCGCACTGCA+AGG - chr4_4:71101176-71101195 None:intergenic 35.0%
TTCCAGAATCCTATAACAGT+AGG - chr4_4:71101379-71101398 None:intergenic 35.0%
TATCAGCAGATATTACACGA+TGG + chr4_4:71101421-71101440 Msa0700210:intron 35.0%
ATCGGAAGTTGAAAGTTGTA+AGG + chr4_4:71101446-71101465 Msa0700210:intron 35.0%
!! TTATATTTAGAGGAGTGCTG+TGG + chr4_4:71101490-71101509 Msa0700210:intron 35.0%
TTATATGGGATCCATTTCCA+AGG - chr4_4:71101582-71101601 None:intergenic 35.0%
GAAATGGATCCCATATAAAG+TGG + chr4_4:71101584-71101603 Msa0700210:intron 35.0%
TGGATCTCACCACTTTATAT+GGG - chr4_4:71101596-71101615 None:intergenic 35.0%
TCTGTATCAGGAACTATAAC+CGG + chr4_4:71101800-71101819 Msa0700210:intron 35.0%
AATGCAATGAATTATCCACC+CGG - chr4_4:71101822-71101841 None:intergenic 35.0%
TCTTGTGTAGGTACGAAAAA+TGG + chr4_4:71101869-71101888 Msa0700210:intron 35.0%
GCAAGAAAATTGATCAAAGC+AGG + chr4_4:71102027-71102046 Msa0700210:CDS 35.0%
TTAGGTGACAGAAACTAGTA+AGG - chr4_4:71102054-71102073 None:intergenic 35.0%
ACCTTGATGCATATCATGTT+TGG + chr4_4:71102358-71102377 Msa0700210:intron 35.0%
TCCAAACATGATATGCATCA+AGG - chr4_4:71102362-71102381 None:intergenic 35.0%
ATGCATATCATGTTTGGAAG+AGG + chr4_4:71102364-71102383 Msa0700210:intron 35.0%
! CTGAAAATTACCTGTTTCTC+TGG + chr4_4:71102392-71102411 Msa0700210:intron 35.0%
! GAAAATTACCTGTTTCTCTG+GGG + chr4_4:71102394-71102413 Msa0700210:intron 35.0%
AATTGCTCTGTAGAAAAACC+TGG - chr4_4:71102424-71102443 None:intergenic 35.0%
ATATTGTATAAGGGTAGGCT+GGG - chr4_4:71102502-71102521 None:intergenic 35.0%
AGCCTACCCTTATACAATAT+GGG + chr4_4:71102502-71102521 Msa0700210:CDS 35.0%
!! GTTTTTCAACGTACCAGAAA+TGG - chr4_4:71102535-71102554 None:intergenic 35.0%
CCAACAAGTATTTAAGGACA+TGG - chr4_4:71102566-71102585 None:intergenic 35.0%
CCATGTCCTTAAATACTTGT+TGG + chr4_4:71102563-71102582 Msa0700210:intron 35.0%
! TTGATTTGAGAAACAAAGGG+AGG + chr4_4:71102693-71102712 Msa0700210:intron 35.0%
! TACCAAGATAGACTTTAAGG+TGG + chr4_4:71102874-71102893 Msa0700210:CDS 35.0%
ACAGATGTCTTTACTGGTAA+GGG - chr4_4:71102995-71103014 None:intergenic 35.0%
!! AGGGATTAGTTTCTACAACA+AGG - chr4_4:71103239-71103258 None:intergenic 35.0%
GAGAAGAAGAACAAAGGGAA+AGG - chr4_4:71095366-71095385 None:intergenic 40.0%
GATCGGAGAAGAAGAACAAA+GGG - chr4_4:71095371-71095390 None:intergenic 40.0%
TGAAGAAATGTGAGATCCGT+CGG - chr4_4:71095425-71095444 None:intergenic 40.0%
! TTGTTTGAAACTGGAAGAGG+TGG - chr4_4:71095490-71095509 None:intergenic 40.0%
!! GGATTTTGAGGGTTTGGTTT+TGG - chr4_4:71095524-71095543 None:intergenic 40.0%
TTGTTCGGGAATAATTTCGG+GGG - chr4_4:71095566-71095585 None:intergenic 40.0%
CTTGTTCGGGAATAATTTCG+GGG - chr4_4:71095567-71095586 None:intergenic 40.0%
AAGGGGAAAGATTCTTGTTC+GGG - chr4_4:71095580-71095599 None:intergenic 40.0%
GAAGGGGAAAGATTCTTGTT+CGG - chr4_4:71095581-71095600 None:intergenic 40.0%
GAGTGAGAAGATGAAGTTGA+AGG - chr4_4:71095655-71095674 None:intergenic 40.0%
! CCTTTTAGTGCCTTGACTAT+CGG - chr4_4:71095850-71095869 None:intergenic 40.0%
TGTTGAGAATGCAAAGCAAC+AGG + chr4_4:71096083-71096102 Msa0700210:CDS 40.0%
CGATTAAGAATGTGCTTGCT+GGG + chr4_4:71096250-71096269 Msa0700210:CDS 40.0%
!! TACGCTTGTTGTTAGTCCTT+TGG + chr4_4:71096353-71096372 Msa0700210:CDS 40.0%
!!! CAGTGCTCAGGTTGATTTTA+CGG + chr4_4:71096437-71096456 Msa0700210:intron 40.0%
AACTGAATTCAGCTTTGCCT+TGG + chr4_4:71096602-71096621 Msa0700210:intron 40.0%
TCTTCATTCAAGAATCGCTC+TGG - chr4_4:71096815-71096834 None:intergenic 40.0%
TTTCTGTCTGTTATCTCTGG+TGG + chr4_4:71096836-71096855 Msa0700210:CDS 40.0%
TTCTGTCTGTTATCTCTGGT+GGG + chr4_4:71096837-71096856 Msa0700210:CDS 40.0%
TGAGTCTCATGAATGAAGGT+CGG - chr4_4:71097042-71097061 None:intergenic 40.0%
AATATCCAGGGCAGACATAA+TGG - chr4_4:71097146-71097165 None:intergenic 40.0%
GATTTGTGCAAGGAATATCC+AGG - chr4_4:71097159-71097178 None:intergenic 40.0%
AAGACTTCATAAGCACCAGT+AGG - chr4_4:71097342-71097361 None:intergenic 40.0%
! GCAAATTTCAGGTGCGTATA+TGG + chr4_4:71097398-71097417 Msa0700210:intron 40.0%
AGTGATGTTGTATTCTGCAG+TGG + chr4_4:71097596-71097615 Msa0700210:intron 40.0%
TGGTTCAAACAAGATCAGAG+TGG + chr4_4:71097881-71097900 Msa0700210:CDS 40.0%
TGCGTCTAATACAACATTGC+TGG + chr4_4:71097941-71097960 Msa0700210:intron 40.0%
GCGTCTAATACAACATTGCT+GGG + chr4_4:71097942-71097961 Msa0700210:intron 40.0%
TATGAAGGTTGTTGCAACTG+TGG + chr4_4:71098019-71098038 Msa0700210:intron 40.0%
AAAGAGATGTTGGAGCAGTA+AGG + chr4_4:71098063-71098082 Msa0700210:intron 40.0%
ACATAAGGCACAAGGAAAAG+TGG - chr4_4:71098207-71098226 None:intergenic 40.0%
GGAGAATTGAGCTCTTTACT+TGG + chr4_4:71098342-71098361 Msa0700210:intron 40.0%
TTACAGTTTACCTGGAAGTC+TGG + chr4_4:71098506-71098525 Msa0700210:CDS 40.0%
! AAGTCTGGAAGAGTATGTAC+AGG + chr4_4:71098521-71098540 Msa0700210:CDS 40.0%
! CAATTTTTCATCCGCAGTGA+AGG + chr4_4:71098794-71098813 Msa0700210:intron 40.0%
!! ATTCATCGATTCCTTCACTG+CGG - chr4_4:71098808-71098827 None:intergenic 40.0%
GTAACTGAAAACCACTCATC+TGG - chr4_4:71099000-71099019 None:intergenic 40.0%
TCACCATCAATGTATCAGCA+TGG - chr4_4:71099058-71099077 None:intergenic 40.0%
!! TGCTGATACATTGATGGTGA+AGG + chr4_4:71099058-71099077 Msa0700210:intron 40.0%
!! GCTGATACATTGATGGTGAA+GGG + chr4_4:71099059-71099078 Msa0700210:intron 40.0%
!! CTGATACATTGATGGTGAAG+GGG + chr4_4:71099060-71099079 Msa0700210:intron 40.0%
!! TGATACATTGATGGTGAAGG+GGG + chr4_4:71099061-71099080 Msa0700210:intron 40.0%
GTCTCAAGTTAATCTGGACA+TGG - chr4_4:71099289-71099308 None:intergenic 40.0%
AAAGCTAAGGTGCAGTTTCT+AGG + chr4_4:71099314-71099333 Msa0700210:intron 40.0%
CTGTGAGAATCACCTAGTAA+AGG - chr4_4:71099521-71099540 None:intergenic 40.0%
! CAGCAATAGCAGAAACCTTT+TGG - chr4_4:71099887-71099906 None:intergenic 40.0%
! CAAACCATTTTCCCCTGAAA+TGG + chr4_4:71099959-71099978 Msa0700210:intron 40.0%
TTGGATCAGATTCCATCTTG+AGG - chr4_4:71100022-71100041 None:intergenic 40.0%
GATCTGAAAACACGTAACGA+TGG - chr4_4:71100185-71100204 None:intergenic 40.0%
AGTTGTATGCCCTAAAGGTT+TGG + chr4_4:71100288-71100307 Msa0700210:intron 40.0%
!! GGTTTGGATTAGTCGATAAC+TGG + chr4_4:71100304-71100323 Msa0700210:intron 40.0%
! ATCCAGCTTGTTTAAGCACA+TGG + chr4_4:71100467-71100486 Msa0700210:intron 40.0%
AACCATGTGCTTAAACAAGC+TGG - chr4_4:71100472-71100491 None:intergenic 40.0%
GATTTGATGCAGGGTAACAA+AGG - chr4_4:71100674-71100693 None:intergenic 40.0%
GCTAATCAGAGATTTGATGC+AGG - chr4_4:71100684-71100703 None:intergenic 40.0%
AGCCATAAATACTTGCAGCA+TGG + chr4_4:71100787-71100806 Msa0700210:intron 40.0%
AGCCATGCTGCAAGTATTTA+TGG - chr4_4:71100792-71100811 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG - chr4_4:71101041-71101060 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG - chr4_4:71101067-71101086 None:intergenic 40.0%
! CTTACCCTGTTTTACACAAG+AGG + chr4_4:71101065-71101084 Msa0700210:intron 40.0%
ACAGCCTCTTGTGTAAAACA+GGG - chr4_4:71101072-71101091 None:intergenic 40.0%
AACAGCCTCTTGTGTAAAAC+AGG - chr4_4:71101073-71101092 None:intergenic 40.0%
GTTGTTGTCATGTGACTGAA+AGG - chr4_4:71101116-71101135 None:intergenic 40.0%
! ACTGCAAGGTTCTAACATGA+GGG - chr4_4:71101162-71101181 None:intergenic 40.0%
GTTTCCGATACCATACACAA+GGG - chr4_4:71101261-71101280 None:intergenic 40.0%
TGTTTCCGATACCATACACA+AGG - chr4_4:71101262-71101281 None:intergenic 40.0%
GTGGATCTCACCACTTTATA+TGG - chr4_4:71101597-71101616 None:intergenic 40.0%
ATAAAGTGGTGAGATCCACA+TGG + chr4_4:71101598-71101617 Msa0700210:intron 40.0%
TAAAGTGGTGAGATCCACAT+GGG + chr4_4:71101599-71101618 Msa0700210:intron 40.0%
TTTATTGGGTGAAACCCATG+TGG - chr4_4:71101616-71101635 None:intergenic 40.0%
ACATGGGTTTCACCCAATAA+AGG + chr4_4:71101615-71101634 Msa0700210:intron 40.0%
GTTTCACCCAATAAAGGAGT+GGG + chr4_4:71101621-71101640 Msa0700210:intron 40.0%
CTAACACCCACTCCTTTATT+GGG - chr4_4:71101630-71101649 None:intergenic 40.0%
TCTAACACCCACTCCTTTAT+TGG - chr4_4:71101631-71101650 None:intergenic 40.0%
ATAAGTCCTGACTCTGTATC+AGG + chr4_4:71101788-71101807 Msa0700210:intron 40.0%
ATAGTTCCTGATACAGAGTC+AGG - chr4_4:71101797-71101816 None:intergenic 40.0%
CTGTATCAGGAACTATAACC+GGG + chr4_4:71101801-71101820 Msa0700210:intron 40.0%
TTTCGTACCTACACAAGAAG+CGG - chr4_4:71101867-71101886 None:intergenic 40.0%
ATCACACTTCATGCTTGCAA+AGG + chr4_4:71101961-71101980 Msa0700210:CDS 40.0%
ATAAAGGTGAGTCGTTACAC+AGG + chr4_4:71102315-71102334 Msa0700210:intron 40.0%
CATATTGTATAAGGGTAGGC+TGG - chr4_4:71102503-71102522 None:intergenic 40.0%
CAGCCTACCCTTATACAATA+TGG + chr4_4:71102501-71102520 Msa0700210:CDS 40.0%
GCCTACCCTTATACAATATG+GGG + chr4_4:71102503-71102522 Msa0700210:CDS 40.0%
ACCCCATATTGTATAAGGGT+AGG - chr4_4:71102507-71102526 None:intergenic 40.0%
TATGGGGTAAAACCCATTTC+TGG + chr4_4:71102519-71102538 Msa0700210:CDS 40.0%
CACCACCTTAAAGTCTATCT+TGG - chr4_4:71102879-71102898 None:intergenic 40.0%
!! GATAGACTTTAAGGTGGTGA+TGG + chr4_4:71102880-71102899 Msa0700210:CDS 40.0%
CACAGATGTCTTTACTGGTA+AGG - chr4_4:71102996-71103015 None:intergenic 40.0%
CAATGCACAGATGTCTTTAC+TGG - chr4_4:71103001-71103020 None:intergenic 40.0%
!! GACATCTGTGCATTGATTGA+AGG + chr4_4:71103006-71103025 Msa0700210:three_prime_UTR 40.0%
!! ATCTGTGCATTGATTGAAGG+TGG + chr4_4:71103009-71103028 Msa0700210:three_prime_UTR 40.0%
!! TCTGTGCATTGATTGAAGGT+GGG + chr4_4:71103010-71103029 Msa0700210:three_prime_UTR 40.0%
! TACTTTTGCTTGTCTTGACC+TGG - chr4_4:71103125-71103144 None:intergenic 40.0%
CTAGGTCGCACATATAATGA+GGG - chr4_4:71103162-71103181 None:intergenic 40.0%
TCTAGGTCGCACATATAATG+AGG - chr4_4:71103163-71103182 None:intergenic 40.0%
CATTATATGTGCGACCTAGA+TGG + chr4_4:71103163-71103182 Msa0700210:three_prime_UTR 40.0%
ATCCTTGATTCCTTCCATCT+AGG - chr4_4:71103180-71103199 None:intergenic 40.0%
GTTGTAGAAACTAATCCCTC+AGG + chr4_4:71103240-71103259 Msa0700210:three_prime_UTR 40.0%
AACTAATCCCTCAGGTCAAA+AGG + chr4_4:71103248-71103267 Msa0700210:three_prime_UTR 40.0%
! ACCTTTTCCTTTTGACCTGA+GGG - chr4_4:71103258-71103277 None:intergenic 40.0%
! AACCTTTTCCTTTTGACCTG+AGG - chr4_4:71103259-71103278 None:intergenic 40.0%
AGAAGAACAAAGGGAAAGGG+TGG - chr4_4:71095362-71095381 None:intergenic 45.0%
GGATCGGAGAAGAAGAACAA+AGG - chr4_4:71095372-71095391 None:intergenic 45.0%
GAACTTGGTTGTTGTCTTGG+CGG - chr4_4:71095451-71095470 None:intergenic 45.0%
GGTGAACTTGGTTGTTGTCT+TGG - chr4_4:71095454-71095473 None:intergenic 45.0%
! GAAACTGGAAGAGGTGGTTT+TGG - chr4_4:71095484-71095503 None:intergenic 45.0%
GGGTTTAGGAAGGGGTTTAT+TGG - chr4_4:71095545-71095564 None:intergenic 45.0%
AATTTCGGGGGGTTTAGGAA+GGG - chr4_4:71095554-71095573 None:intergenic 45.0%
TAATTTCGGGGGGTTTAGGA+AGG - chr4_4:71095555-71095574 None:intergenic 45.0%
GGAATAATTTCGGGGGGTTT+AGG - chr4_4:71095559-71095578 None:intergenic 45.0%
TGTTCGGGAATAATTTCGGG+GGG - chr4_4:71095565-71095584 None:intergenic 45.0%
GGATGTTGAAAGGAAGTGAG+GGG - chr4_4:71095612-71095631 None:intergenic 45.0%
CGGATGTTGAAAGGAAGTGA+GGG - chr4_4:71095613-71095632 None:intergenic 45.0%
TCGGATGTTGAAAGGAAGTG+AGG - chr4_4:71095614-71095633 None:intergenic 45.0%
GTTCGTTGTCGGATGTTGAA+AGG - chr4_4:71095622-71095641 None:intergenic 45.0%
ATTTGGAGAAGAATCCGGCA+GGG - chr4_4:71095690-71095709 None:intergenic 45.0%
TGCAGAATCAACAACCGGTT+CGG - chr4_4:71095767-71095786 None:intergenic 45.0%
! CCGATAGTCAAGGCACTAAA+AGG + chr4_4:71095847-71095866 Msa0700210:CDS 45.0%
! AGAAGGCGATGATGATGATG+AGG + chr4_4:71096044-71096063 Msa0700210:CDS 45.0%
!! TGAATGCAAAGTGTTGGAGG+AGG + chr4_4:71096128-71096147 Msa0700210:CDS 45.0%
GCGATTAAGAATGTGCTTGC+TGG + chr4_4:71096249-71096268 Msa0700210:CDS 45.0%
!!! GACGATGCTTATTTTGCCGA+CGG + chr4_4:71096278-71096297 Msa0700210:CDS 45.0%
!!! ACGATGCTTATTTTGCCGAC+GGG + chr4_4:71096279-71096298 Msa0700210:CDS 45.0%
!!! TTGAGTGCGTTGATTTTGCC+TGG + chr4_4:71096327-71096346 Msa0700210:CDS 45.0%
!!! TGAGTGCGTTGATTTTGCCT+GGG + chr4_4:71096328-71096347 Msa0700210:CDS 45.0%
CTAACAACAAGCGTAATCCC+AGG - chr4_4:71096348-71096367 None:intergenic 45.0%
ACAATTGCCTCCGCTCATTT+CGG + chr4_4:71096401-71096420 Msa0700210:CDS 45.0%
AAGCTGGTTGAGTGTTTCAG+AGG - chr4_4:71096550-71096569 None:intergenic 45.0%
TTATTGTGCCTTGACGAAGC+TGG - chr4_4:71096566-71096585 None:intergenic 45.0%
GCTTCGTCAAGGCACAATAA+AGG + chr4_4:71096566-71096585 Msa0700210:CDS 45.0%
! GCTCTGAGTCTCATGAATGA+AGG - chr4_4:71097046-71097065 None:intergenic 45.0%
! GGTATTTCTGCAAAGGAACG+TGG + chr4_4:71097840-71097859 Msa0700210:CDS 45.0%
GTTGTTGCAACTGTGGCATT+TGG + chr4_4:71098026-71098045 Msa0700210:CDS 45.0%
! CTAATTGGGCTCTAGTTGCA+TGG + chr4_4:71098177-71098196 Msa0700210:intron 45.0%
ACATACTCTTCCAGACTTCC+AGG - chr4_4:71098519-71098538 None:intergenic 45.0%
! GAATGGGCATTGTAGGAGAT+AGG + chr4_4:71098614-71098633 Msa0700210:intron 45.0%
ATATCAAACCTGCGTGAAGC+AGG - chr4_4:71098911-71098930 None:intergenic 45.0%
CATAACATCCTGTTGGGAGT+TGG + chr4_4:71099032-71099051 Msa0700210:intron 45.0%
TGGCCATGCTGATACATTGA+TGG + chr4_4:71099052-71099071 Msa0700210:intron 45.0%
GACTGGTGCCTATAAGTAGA+TGG - chr4_4:71099370-71099389 None:intergenic 45.0%
! CGTGTTACCTTTTCCAGACT+AGG + chr4_4:71099465-71099484 Msa0700210:intron 45.0%
CTGTAGACCTAGTCTGGAAA+AGG - chr4_4:71099475-71099494 None:intergenic 45.0%
!! TCTCACAGTTTTGACACGCT+TGG + chr4_4:71099533-71099552 Msa0700210:CDS 45.0%
ACACACGTTGCATTTGTCTG+TGG - chr4_4:71099591-71099610 None:intergenic 45.0%
TTTGGCACTAATGCAGACTC+CGG + chr4_4:71099848-71099867 Msa0700210:intron 45.0%
! AGCAGAAACCTTTTGGGCAA+GGG - chr4_4:71099880-71099899 None:intergenic 45.0%
! TAGCAGAAACCTTTTGGGCA+AGG - chr4_4:71099881-71099900 None:intergenic 45.0%
CCATCCATTTCAGGGGAAAA+TGG - chr4_4:71099966-71099985 None:intergenic 45.0%
! CCATTTTCCCCTGAAATGGA+TGG + chr4_4:71099963-71099982 Msa0700210:intron 45.0%
TCCAACTGTGGCAAATGACA+TGG + chr4_4:71100238-71100257 Msa0700210:CDS 45.0%
CCAACTGTGGCAAATGACAT+GGG + chr4_4:71100239-71100258 Msa0700210:CDS 45.0%
CAACTGTGGCAAATGACATG+GGG + chr4_4:71100240-71100259 Msa0700210:CDS 45.0%
AACTGTGGCAAATGACATGG+GGG + chr4_4:71100241-71100260 Msa0700210:CDS 45.0%
GCGTACAATACACCAAATGG+TGG - chr4_4:71101042-71101061 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr4_4:71101045-71101064 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr4_4:71101076-71101095 Msa0700210:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG - chr4_4:71101109-71101128 None:intergenic 45.0%
GTCATGTGACTGAAAGGTCA+CGG - chr4_4:71101110-71101129 None:intergenic 45.0%
TCTAACATGAGGGGTAACCT+TGG - chr4_4:71101152-71101171 None:intergenic 45.0%
! CTGCAAGGTTCTAACATGAG+GGG - chr4_4:71101161-71101180 None:intergenic 45.0%
! CACTGCAAGGTTCTAACATG+AGG - chr4_4:71101163-71101182 None:intergenic 45.0%
!! ACTTTCTAGTTTGGGACACC+TGG + chr4_4:71101217-71101236 Msa0700210:intron 45.0%
TCTGCCCTTGTGTATGGTAT+CGG + chr4_4:71101254-71101273 Msa0700210:intron 45.0%
AGGACATGGCCTACTGTTAT+AGG + chr4_4:71101367-71101386 Msa0700210:intron 45.0%
GGCCTACTGTTATAGGATTC+TGG + chr4_4:71101374-71101393 Msa0700210:intron 45.0%
GGTTTCACCCAATAAAGGAG+TGG + chr4_4:71101620-71101639 Msa0700210:intron 45.0%
TATCAGGAACTATAACCGGG+TGG + chr4_4:71101804-71101823 Msa0700210:intron 45.0%
TTCGTACCTACACAAGAAGC+GGG - chr4_4:71101866-71101885 None:intergenic 45.0%
TTTCCTGCGGGCAGATATAA+AGG + chr4_4:71102299-71102318 Msa0700210:CDS 45.0%
! AAATTGTGGATTGCAGGGGA+AGG + chr4_4:71102849-71102868 Msa0700210:intron 45.0%
!! TAAGGGACTCGGTGCAAATT+TGG - chr4_4:71102978-71102997 None:intergenic 45.0%
GTCTTTACTGGTAAGGGACT+CGG - chr4_4:71102989-71103008 None:intergenic 45.0%
!! CTGTGCATTGATTGAAGGTG+GGG + chr4_4:71103011-71103030 Msa0700210:three_prime_UTR 45.0%
ATATGTGCGACCTAGATGGA+AGG + chr4_4:71103167-71103186 Msa0700210:three_prime_UTR 45.0%
GACCTAGATGGAAGGAATCA+AGG + chr4_4:71103175-71103194 Msa0700210:three_prime_UTR 45.0%
TCCCTCAGGTCAAAAGGAAA+AGG + chr4_4:71103254-71103273 Msa0700210:three_prime_UTR 45.0%
GATTCCGATTCAGACTCCGA+CGG + chr4_4:71095406-71095425 Msa0700210:CDS 50.0%
AGATCCGTCGGAGTCTGAAT+CGG - chr4_4:71095413-71095432 None:intergenic 50.0%
! TTTGGCGGTGATGGTGAACT+TGG - chr4_4:71095466-71095485 None:intergenic 50.0%
!!! ACTGGAAGAGGTGGTTTTGG+CGG - chr4_4:71095481-71095500 None:intergenic 50.0%
ATTTCGGGGGGTTTAGGAAG+GGG - chr4_4:71095553-71095572 None:intergenic 50.0%
AAGGAAGTGAGGGGATGGAA+GGG - chr4_4:71095603-71095622 None:intergenic 50.0%
AAAGGAAGTGAGGGGATGGA+AGG - chr4_4:71095604-71095623 None:intergenic 50.0%
GTTGAAAGGAAGTGAGGGGA+TGG - chr4_4:71095608-71095627 None:intergenic 50.0%
GATTTGGAGAAGAATCCGGC+AGG - chr4_4:71095691-71095710 None:intergenic 50.0%
AGAAACTTCCGAAGCCGAAC+CGG + chr4_4:71095750-71095769 Msa0700210:CDS 50.0%
!! ATCAACAACCGGTTCGGCTT+CGG - chr4_4:71095761-71095780 None:intergenic 50.0%
! GTCAAGGCACTAAAAGGTGC+CGG + chr4_4:71095853-71095872 Msa0700210:CDS 50.0%
! AGGCGATGATGATGATGAGG+AGG + chr4_4:71096047-71096066 Msa0700210:CDS 50.0%
! CGATGATGATGATGAGGAGG+AGG + chr4_4:71096050-71096069 Msa0700210:CDS 50.0%
! GATGATGATGAGGAGGAGGA+TGG + chr4_4:71096054-71096073 Msa0700210:CDS 50.0%
TGATGAGGAGGAGGATGGTA+TGG + chr4_4:71096059-71096078 Msa0700210:CDS 50.0%
GATGAGGAGGAGGATGGTAT+GGG + chr4_4:71096060-71096079 Msa0700210:CDS 50.0%
!! TTATTTTGCCGACGGGTGCT+GGG + chr4_4:71096286-71096305 Msa0700210:CDS 50.0%
CAATTGCCTCCGCTCATTTC+GGG + chr4_4:71096402-71096421 Msa0700210:CDS 50.0%
ACACTCAACCAGCTTCGTCA+AGG + chr4_4:71096555-71096574 Msa0700210:CDS 50.0%
AGATGCCATTATGTCTGCCC+TGG + chr4_4:71097138-71097157 Msa0700210:CDS 50.0%
AAAGGAACGTGGCTACGTAC+AGG + chr4_4:71097851-71097870 Msa0700210:CDS 50.0%
GGCTACGTACAGGAGTTGTT+TGG + chr4_4:71097861-71097880 Msa0700210:CDS 50.0%
TGCAACTGTGGCATTTGGCA+TGG + chr4_4:71098031-71098050 Msa0700210:CDS 50.0%
GCAACTGTGGCATTTGGCAT+GGG + chr4_4:71098032-71098051 Msa0700210:CDS 50.0%
TTGTAGGAGATAGGACGTGC+CGG + chr4_4:71098623-71098642 Msa0700210:intron 50.0%
CTGCTGACAAAAGCTCCTGT+GGG + chr4_4:71098861-71098880 Msa0700210:CDS 50.0%
TCAAAGAACCTGCTTCACGC+AGG + chr4_4:71098900-71098919 Msa0700210:CDS 50.0%
!! AGTTTTGACACGCTTGGAGC+TGG + chr4_4:71099539-71099558 Msa0700210:CDS 50.0%
!! GTTTTGACACGCTTGGAGCT+GGG + chr4_4:71099540-71099559 Msa0700210:CDS 50.0%
AGGGAACGCATACCGTCTAA+TGG + chr4_4:71100059-71100078 Msa0700210:intron 50.0%
! CCCATGTCATTTGCCACAGT+TGG - chr4_4:71100242-71100261 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG + chr4_4:71101132-71101151 Msa0700210:intron 50.0%
! TTTGGGACACCTGGCCAATT+TGG + chr4_4:71101226-71101245 Msa0700210:intron 50.0%
AAGGGCAGAGTAGGCCAAAT+TGG - chr4_4:71101243-71101262 None:intergenic 50.0%
ACCATACACAAGGGCAGAGT+AGG - chr4_4:71101252-71101271 None:intergenic 50.0%
TGAGTCCCACACCTTGGAAA+TGG + chr4_4:71101568-71101587 Msa0700210:intron 50.0%
GGGATCCATTTCCAAGGTGT+GGG - chr4_4:71101576-71101595 None:intergenic 50.0%
TGGGATCCATTTCCAAGGTG+TGG - chr4_4:71101577-71101596 None:intergenic 50.0%
ACATACGCAGTCGTTTCCTG+CGG + chr4_4:71102286-71102305 Msa0700210:intron 50.0%
TCACCTTTATATCTGCCCGC+AGG - chr4_4:71102305-71102324 None:intergenic 50.0%
CTGGTAATCCCCAGAGAAAC+AGG - chr4_4:71102405-71102424 None:intergenic 50.0%
! CTGTTTCTCTGGGGATTACC+AGG + chr4_4:71102403-71102422 Msa0700210:intron 50.0%
TTACACCAAGAGCTGTTGCG+AGG + chr4_4:71102456-71102475 Msa0700210:CDS 50.0%
TACACCAAGAGCTGTTGCGA+GGG + chr4_4:71102457-71102476 Msa0700210:CDS 50.0%
ATTACCCTCGCAACAGCTCT+TGG - chr4_4:71102464-71102483 None:intergenic 50.0%
! CTCGGTGCAAATTTGGCAGA+TGG - chr4_4:71102971-71102990 None:intergenic 50.0%
!! TGCATTGATTGAAGGTGGGG+CGG + chr4_4:71103014-71103033 Msa0700210:three_prime_UTR 50.0%
CTTGACCTGGAGTAACAGAC+AGG - chr4_4:71103112-71103131 None:intergenic 50.0%
!!! AGAGGTGGTTTTGGCGGTGA+TGG - chr4_4:71095475-71095494 None:intergenic 55.0%
AGTGAGGGGATGGAAGGGAA+GGG - chr4_4:71095598-71095617 None:intergenic 55.0%
AAGTGAGGGGATGGAAGGGA+AGG - chr4_4:71095599-71095618 None:intergenic 55.0%
GAGCGTCAGACGTTCGTTGT+CGG - chr4_4:71095633-71095652 None:intergenic 55.0%
TCTATCGAAACCCTCCCTGC+CGG + chr4_4:71095673-71095692 Msa0700210:CDS 55.0%
TGTGGGAACGCCGATAGTCA+AGG + chr4_4:71095837-71095856 Msa0700210:CDS 55.0%
!! GCACTAAAAGGTGCCGGAGA+AGG + chr4_4:71095859-71095878 Msa0700210:CDS 55.0%
!! TTTTCGAGAGGGGCAGCTTG+AGG + chr4_4:71096227-71096246 Msa0700210:CDS 55.0%
!!! CTTATTTTGCCGACGGGTGC+TGG + chr4_4:71096285-71096304 Msa0700210:CDS 55.0%
!! AGAAGAGCGCCCGAAATGAG+CGG - chr4_4:71096414-71096433 None:intergenic 55.0%
CGCTCTTCTAAGCAGTGCTC+AGG + chr4_4:71096425-71096444 Msa0700210:CDS 55.0%
! CCACAGGAGCTTTTGTCAGC+AGG - chr4_4:71098863-71098882 None:intergenic 55.0%
CCTGCTGACAAAAGCTCCTG+TGG + chr4_4:71098860-71098879 Msa0700210:CDS 55.0%
! TTTTGGGCAAGGGACACAGC+CGG - chr4_4:71099870-71099889 None:intergenic 55.0%
GAACCTTGCAAAGGGCAACC+CGG + chr4_4:71100975-71100994 Msa0700210:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr4_4:71101097-71101116 None:intergenic 55.0%
CAGAGTAGGCCAAATTGGCC+AGG - chr4_4:71101238-71101257 None:intergenic 55.0%
GCCTACTCTGCCCTTGTGTA+TGG + chr4_4:71101248-71101267 Msa0700210:intron 55.0%
CCAAGGTGTGGGACTCACAT+AGG - chr4_4:71101565-71101584 None:intergenic 55.0%
CCTATGTGAGTCCCACACCT+TGG + chr4_4:71101562-71101581 Msa0700210:intron 55.0%
CATGGTCCCGCTTCTTGTGT+AGG + chr4_4:71101857-71101876 Msa0700210:intron 55.0%
CATACGCAGTCGTTTCCTGC+GGG + chr4_4:71102287-71102306 Msa0700210:intron 55.0%
GCTGTTGCGAGGGTAATGCA+CGG + chr4_4:71102467-71102486 Msa0700210:CDS 55.0%
!! GGTGGTGATGGAAGCAGCTA+AGG + chr4_4:71102892-71102911 Msa0700210:CDS 55.0%
!! GCATTGATTGAAGGTGGGGC+GGG + chr4_4:71103015-71103034 Msa0700210:three_prime_UTR 55.0%
! CATTGATTGAAGGTGGGGCG+GGG + chr4_4:71103016-71103035 Msa0700210:three_prime_UTR 55.0%
ATTGATTGAAGGTGGGGCGG+GGG + chr4_4:71103017-71103036 Msa0700210:three_prime_UTR 55.0%
ACATGGCGCGAAACAACTGC+AGG - chr4_4:71103060-71103079 None:intergenic 55.0%
CTGGAGTAACAGACAGGCAG+CGG - chr4_4:71103106-71103125 None:intergenic 55.0%
GTGAGGGGATGGAAGGGAAG+GGG - chr4_4:71095597-71095616 None:intergenic 60.0%
GGAGAAGAATCCGGCAGGGA+GGG - chr4_4:71095686-71095705 None:intergenic 60.0%
TGGAGAAGAATCCGGCAGGG+AGG - chr4_4:71095687-71095706 None:intergenic 60.0%
AGGAGATAGGACGTGCCGGA+AGG + chr4_4:71098627-71098646 Msa0700210:intron 60.0%
GGAGATAGGACGTGCCGGAA+GGG + chr4_4:71098628-71098647 Msa0700210:intron 60.0%
ATAGGACGTGCCGGAAGGGA+TGG + chr4_4:71098632-71098651 Msa0700210:CDS 60.0%
TAGGACGTGCCGGAAGGGAT+GGG + chr4_4:71098633-71098652 Msa0700210:CDS 60.0%
GGACAACCTCCCATCCCTTC+CGG - chr4_4:71098645-71098664 None:intergenic 60.0%
CAGCATGGCCAACTCCCAAC+AGG - chr4_4:71099043-71099062 None:intergenic 60.0%
GGCTGTGTCCCTTGCCCAAA+AGG + chr4_4:71099869-71099888 Msa0700210:CDS 60.0%
ACTAGAGCCCCCGCATATGC+AGG + chr4_4:71101001-71101020 Msa0700210:intron 60.0%
CTAGAGCCCCCGCATATGCA+GGG + chr4_4:71101002-71101021 Msa0700210:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr4_4:71101013-71101032 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr4_4:71101014-71101033 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr4_4:71101013-71101032 Msa0700210:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr4_4:71101014-71101033 Msa0700210:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr4_4:71101029-71101048 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - chr4_4:71101143-71101162 None:intergenic 60.0%
GAGTAACAGACAGGCAGCGG+CGG - chr4_4:71103103-71103122 None:intergenic 60.0%
CGCTGCCTGTCTGTTACTCC+AGG + chr4_4:71103104-71103123 Msa0700210:three_prime_UTR 60.0%
AGCGACTTCCCAGCACCCGT+CGG - chr4_4:71096297-71096316 None:intergenic 65.0%
! AGAGCGCCCGAAATGAGCGG+AGG - chr4_4:71096411-71096430 None:intergenic 65.0%
GCACCGGGTTGCCCTTTGCA+AGG - chr4_4:71100981-71101000 None:intergenic 65.0%
! ATGCGGGGGCTCTAGTGCAC+CGG - chr4_4:71100997-71101016 None:intergenic 65.0%
TCCCGGACCCTGCATATGCG+GGG - chr4_4:71101012-71101031 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr4_4:71101012-71101031 Msa0700210:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr4_4:71101027-71101046 Msa0700210:intron 65.0%
GACGTGCCGGAAGGGATGGG+AGG + chr4_4:71098636-71098655 Msa0700210:CDS 70.0%
! TGCGGGGGCTCTAGTGCACC+GGG - chr4_4:71100996-71101015 None:intergenic 70.0%
GCCCCCGCATATGCAGGGTC+CGG + chr4_4:71101007-71101026 Msa0700210:intron 70.0%
CCCGGACCCTGCATATGCGG+GGG - chr4_4:71101011-71101030 None:intergenic 70.0%
CCCCCGCATATGCAGGGTCC+GGG + chr4_4:71101008-71101027 Msa0700210:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 71095354 71103533 71095354 ID=Msa0700210;Name=Msa0700210
chr4_4 mRNA 71095354 71103533 71095354 ID=Msa0700210-mRNA-1;Parent=Msa0700210;Name=Msa0700210-mRNA-1;_AED=0.12;_eAED=0.12;_QI=43|0.88|0.94|1|1|1|18|581|866
chr4_4 exon 71095354 71096446 71095354 ID=Msa0700210-mRNA-1:exon:21588;Parent=Msa0700210-mRNA-1
chr4_4 exon 71096534 71096587 71096534 ID=Msa0700210-mRNA-1:exon:21589;Parent=Msa0700210-mRNA-1
chr4_4 exon 71096797 71096909 71096797 ID=Msa0700210-mRNA-1:exon:21590;Parent=Msa0700210-mRNA-1
chr4_4 exon 71097027 71097221 71097027 ID=Msa0700210-mRNA-1:exon:21591;Parent=Msa0700210-mRNA-1
chr4_4 exon 71097330 71097408 71097330 ID=Msa0700210-mRNA-1:exon:21592;Parent=Msa0700210-mRNA-1
chr4_4 exon 71097678 71097731 71097678 ID=Msa0700210-mRNA-1:exon:21593;Parent=Msa0700210-mRNA-1
chr4_4 exon 71097828 71097902 71097828 ID=Msa0700210-mRNA-1:exon:21594;Parent=Msa0700210-mRNA-1
chr4_4 exon 71098026 71098079 71098026 ID=Msa0700210-mRNA-1:exon:21595;Parent=Msa0700210-mRNA-1
chr4_4 exon 71098498 71098542 71098498 ID=Msa0700210-mRNA-1:exon:21596;Parent=Msa0700210-mRNA-1
chr4_4 exon 71098629 71098723 71098629 ID=Msa0700210-mRNA-1:exon:21597;Parent=Msa0700210-mRNA-1
chr4_4 exon 71098811 71098940 71098811 ID=Msa0700210-mRNA-1:exon:21598;Parent=Msa0700210-mRNA-1
chr4_4 exon 71099528 71099626 71099528 ID=Msa0700210-mRNA-1:exon:21599;Parent=Msa0700210-mRNA-1
chr4_4 exon 71099864 71099919 71099864 ID=Msa0700210-mRNA-1:exon:21600;Parent=Msa0700210-mRNA-1
chr4_4 exon 71100202 71100304 71100202 ID=Msa0700210-mRNA-1:exon:21601;Parent=Msa0700210-mRNA-1
chr4_4 exon 71101879 71102048 71101879 ID=Msa0700210-mRNA-1:exon:21602;Parent=Msa0700210-mRNA-1
chr4_4 exon 71102296 71102320 71102296 ID=Msa0700210-mRNA-1:exon:21603;Parent=Msa0700210-mRNA-1
chr4_4 exon 71102425 71102540 71102425 ID=Msa0700210-mRNA-1:exon:21604;Parent=Msa0700210-mRNA-1
chr4_4 exon 71102865 71103533 71102865 ID=Msa0700210-mRNA-1:exon:21605;Parent=Msa0700210-mRNA-1
chr4_4 five_prime_UTR 71095354 71095396 71095354 ID=Msa0700210-mRNA-1:five_prime_utr;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71095397 71096446 71095397 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71096534 71096587 71096534 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71096797 71096909 71096797 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71097027 71097221 71097027 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71097330 71097408 71097330 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71097678 71097731 71097678 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71097828 71097902 71097828 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71098026 71098079 71098026 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71098498 71098542 71098498 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71098629 71098723 71098629 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71098811 71098940 71098811 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71099528 71099626 71099528 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71099864 71099919 71099864 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71100202 71100304 71100202 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71101879 71102048 71101879 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71102296 71102320 71102296 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71102425 71102540 71102425 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 CDS 71102865 71102952 71102865 ID=Msa0700210-mRNA-1:cds;Parent=Msa0700210-mRNA-1
chr4_4 three_prime_UTR 71102953 71103533 71102953 ID=Msa0700210-mRNA-1:three_prime_utr;Parent=Msa0700210-mRNA-1
Gene Sequence

>Msa0700210

ATGCAGTTTGATTCCGATTCAGACTCCGACGGATCTCACATTTCTTCAACTCCGCCAAGACAACAACCAAGTTCACCATCACCGCCAAAACCACCTCTTCCAGTTTCAAACAAAAAATGGAAATCCAAAACCAAACCCTCAAAATCCAATAAACCCCTTCCTAAACCCCCCGAAATTATTCCCGAACAAGAATCTTTCCCCTTCCCTTCCATCCCCTCACTTCCTTTCAACATCCGACAACGAACGTCTGACGCTCCTTCAACTTCATCTTCTCACTCTATCGAAACCCTCCCTGCCGGATTCTTCTCCAAATCAATTTCATTCTCCAAAATTCGTAAACCCTTACTCAATCTAGAAACTTCCGAAGCCGAACCGGTTGTTGATTCTGCAAAAACTGTAGCGAAATCTGTGAAGAAACATCCTAATTTGATAGGTGCTAGTGTGGGAACGCCGATAGTCAAGGCACTAAAAGGTGCCGGAGAAGGAAATTTTGTGAAATTGAATTTGAATGGGAAGAGGAAAAAGTTTTTGAATAAAGGGTGGACGAAAAATGGAAAATTTGGTAGTGGTAAAAGGTATTTTAGAAATAGTAATGGCAGCAATAGTGGTAGAAGTAGTAGAAGTAAACGTATAAAATCGGAACACAAAGAAGGCGATGATGATGATGAGGAGGAGGATGGTATGGGTGTTGAGAATGCAAAGCAACAGGAAAAGAAGAATGGTTGGGAAAATGAATGCAAAGTGTTGGAGGAGGCTGTGTTAGCAGCAAGAGATGAAGCTTCTGATGAGAATTTGGTGAAGTTGTTGAAATTGATTCATGGTTTTGATTCTTTTCGAGAGGGGCAGCTTGAGGCGATTAAGAATGTGCTTGCTGGGAAATCGACGATGCTTATTTTGCCGACGGGTGCTGGGAAGTCGCTGTGTTATCAGTTGAGTGCGTTGATTTTGCCTGGGATTACGCTTGTTGTTAGTCCTTTGGTAGCTTTGATGATTGATCAGCTTCGACAATTGCCTCCGCTCATTTCGGGCGCTCTTCTAAGCAGTGCTCAGTCATTTGAAGAATCCTCTGAAACACTCAACCAGCTTCGTCAAGGCACAATAAAGGTGCTTTTTGTTTCACCAGAGCGATTCTTGAATGAAGAATTTCTGTCTGTTATCTCTGGTGGGTTAGCCGTCTCACTTGTTGTTATTGATGAAGCACATTGTATATCTGAATGGTCTCACAATTTCCGACCTTCATTCATGAGACTCAGAGCGTCACTACTTCATAAGAGTCTTAATGTAGGTTCTATTCTTGCAATGACAGCAACTGCTACAACCATGACTTTAGATGCCATTATGTCTGCCCTGGATATTCCTTGCACAAATCTTATTCTAAATGCGCACTTAAGGGACAATTTGCGTTTGTCTGTAATGAAAGACCTACTGGTGCTTATGAAGTCTTCACCTTTTGCGGAAGTTAAAAGCATCATAGTATACTGCAAATTTCAGTCTGAAACTGATCAAATTAGCAGATATTTGAATGATAACAACATCAAGGCAAAGAGTTATCATAGTGGTATTTCTGCAAAGGAACGTGGCTACGTACAGGAGTTGTTTGGTTCAAACAAGATCAGAGTGGTTGTTGCAACTGTGGCATTTGGCATGGGACTAGATAAAAGAGATGTTGGAGCAGTAATTCATTACAGTTTACCTGGAAGTCTGGAAGAGTATGTACAGGAGATAGGACGTGCCGGAAGGGATGGGAGGTTGTCCTATTGTCACCTATTTTATGATGATGAGATGTATTTCAAACTTCGTAGTCTAATGTACAGTGAAGGAATCGATGAATATGCAGTGAATAAATTTCTGTCTGAAGTGTTTCCTGCTGACAAAAGCTCCTGTGGGAAAATATGTTCGTTAATCAAAGAACCTGCTTCACGCAGGTTTGATATGAAAGAAGAGGTGATTCTCACAGTTTTGACACGCTTGGAGCTGGGTGACGTGCAGTACTTACATTTACTTCCACAGACAAATGCAACGTGTGTTCTGAGTTTTCATATGACTCCGGCTGTGTCCCTTGCCCAAAAGGTTTCTGCTATTGCTGTGATTCTGAAAAGATCTGAAAATAAGCACGGACAATATACTTTTGATATTCCAACTGTGGCAAATGACATGGGGGTCACACCAGTTGAATTAACAAATCAGTTGTATGCCCTAAAGGTACGAAAAATGGATGCAATGTTTAATGCTGCATATTTTGCAGTAAATCTATGTGATAAGATGAACGGTTGCAGTAGTTTTGATCACACTTCATGCTTGCAAAGGATAATATTGGATTACTTTGCTGGAGTTGATAATGCTGATTTCTGCAAGAAAATTGATCAAAGCAGTCGTTTCCTGCGGGCAGATATAAAGGTTTTTCTACAGAGCAATTCGCATACTCGCTTTACACCAAGAGCTGTTGCGAGGGTAATGCACGGAATTGCAAGCCCAGCCTACCCTTATACAATATGGGGTAAAACCCATTTCTGGGGAAGGTATACCAAGATAGACTTTAAGGTGGTGATGGAAGCAGCTAAGGAAGAACTTAAAAAATTTATTGGAAAAGATTTACTCTAA
Protein sequence

>Msa0700210

MQFDSDSDSDGSHISSTPPRQQPSSPSPPKPPLPVSNKKWKSKTKPSKSNKPLPKPPEIIPEQESFPFPSIPSLPFNIRQRTSDAPSTSSSHSIETLPAGFFSKSISFSKIRKPLLNLETSEAEPVVDSAKTVAKSVKKHPNLIGASVGTPIVKALKGAGEGNFVKLNLNGKRKKFLNKGWTKNGKFGSGKRYFRNSNGSNSGRSSRSKRIKSEHKEGDDDDEEEDGMGVENAKQQEKKNGWENECKVLEEAVLAARDEASDENLVKLLKLIHGFDSFREGQLEAIKNVLAGKSTMLILPTGAGKSLCYQLSALILPGITLVVSPLVALMIDQLRQLPPLISGALLSSAQSFEESSETLNQLRQGTIKVLFVSPERFLNEEFLSVISGGLAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKSLNVGSILAMTATATTMTLDAIMSALDIPCTNLILNAHLRDNLRLSVMKDLLVLMKSSPFAEVKSIIVYCKFQSETDQISRYLNDNNIKAKSYHSGISAKERGYVQELFGSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPGSLEEYVQEIGRAGRDGRLSYCHLFYDDEMYFKLRSLMYSEGIDEYAVNKFLSEVFPADKSSCGKICSLIKEPASRRFDMKEEVILTVLTRLELGDVQYLHLLPQTNATCVLSFHMTPAVSLAQKVSAIAVILKRSENKHGQYTFDIPTVANDMGVTPVELTNQLYALKVRKMDAMFNAAYFAVNLCDKMNGCSSFDHTSCLQRIILDYFAGVDNADFCKKIDQSSRFLRADIKVFLQSNSHTRFTPRAVARVMHGIASPAYPYTIWGKTHFWGRYTKIDFKVVMEAAKEELKKFIGKDLL*