AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0617430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0617430 MtrunA17_Chr8g0377041 91.785 913 25 3 1 864 1 912 0.0 1695
Msa0617430 MtrunA17_Chr2g0300871 40.111 359 195 9 260 601 25 380 7.47e-62 223
Msa0617430 MtrunA17_Chr2g0277541 36.338 355 208 6 270 610 401 751 1.45e-60 224
Msa0617430 MtrunA17_Chr1g0192571 36.158 354 196 9 271 603 197 541 9.54e-60 214
Msa0617430 MtrunA17_Chr5g0409101 37.463 339 188 10 272 591 84 417 2.78e-54 201
Msa0617430 MtrunA17_Chr3g0108851 35.756 344 196 8 263 591 2 335 1.03e-50 192
Msa0617430 MtrunA17_Chr1g0192101 32.203 236 141 7 250 471 135 365 5.09e-26 115
Msa0617430 MtrunA17_Chr1g0192101 33.679 193 106 5 491 663 510 700 1.27e-21 100
Msa0617430 MtrunA17_Chr2g0330401 25.076 331 219 8 282 591 122 444 3.08e-15 79.7
Msa0617430 MtrunA17_Chr3g0107851 25.434 346 219 11 282 597 143 479 4.17e-15 79.3
Msa0617430 MtrunA17_Chr2g0293631 22.741 343 237 9 274 596 514 848 1.00e-14 79.0
Msa0617430 MtrunA17_Chr4g0076491 23.298 382 239 15 267 603 296 668 7.99e-14 75.5
Msa0617430 MtrunA17_Chr6g0449911 23.768 345 227 10 274 594 183 515 3.17e-13 73.6
Msa0617430 MtrunA17_Chr1g0200181 22.689 357 203 10 282 592 171 500 7.86e-13 72.0
Msa0617430 MtrunA17_Chr2g0297261 26.829 164 107 2 464 614 238 401 1.27e-12 70.9
Msa0617430 MtrunA17_Chr5g0409981 22.422 446 261 11 211 591 31 456 2.91e-12 70.1
Msa0617430 MtrunA17_Chr3g0121351 23.164 354 234 11 282 602 171 519 4.43e-12 69.7
Msa0617430 MtrunA17_Chr7g0263771 24.146 439 280 13 207 609 75 496 6.24e-12 69.3
Msa0617430 MtrunA17_Chr6g0461751 24.661 369 213 16 267 594 149 493 8.49e-12 68.9
Msa0617430 MtrunA17_Chr1g0157691 23.343 347 213 12 282 592 173 502 2.47e-11 67.4
Msa0617430 MtrunA17_Chr6g0449741 22.740 365 228 14 282 603 275 628 3.72e-11 67.0
Msa0617430 MtrunA17_Chr7g0271121 30.827 133 86 2 470 602 340 466 6.52e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0617430 AT1G27880.1 51.016 935 356 15 3 864 1 906 0.0 842
Msa0617430 AT1G27880.2 50.343 874 332 15 3 803 1 845 0.0 746
Msa0617430 AT4G35740.1 36.691 417 221 12 260 638 19 430 2.51e-62 224
Msa0617430 AT1G10930.1 36.798 356 205 7 270 610 446 796 5.09e-60 223
Msa0617430 AT1G31360.8 38.053 339 186 8 272 591 84 417 2.77e-58 208
Msa0617430 AT1G31360.4 38.053 339 186 8 272 591 84 417 2.77e-58 208
Msa0617430 AT3G05740.2 35.695 367 209 11 254 603 103 459 3.13e-58 208
Msa0617430 AT1G31360.7 38.053 339 186 8 272 591 84 417 4.07e-58 209
Msa0617430 AT1G31360.5 38.053 339 186 8 272 591 84 417 1.03e-57 208
Msa0617430 AT1G31360.6 38.053 339 186 8 272 591 84 417 3.03e-57 208
Msa0617430 AT3G05740.1 34.973 366 213 9 254 603 188 544 3.41e-57 207
Msa0617430 AT1G31360.1 38.053 339 186 8 272 591 84 417 4.83e-57 209
Msa0617430 AT1G31360.3 38.053 339 186 8 272 591 118 451 6.01e-57 209
Msa0617430 AT1G31360.2 37.710 297 161 8 314 591 1 292 3.01e-44 169
Msa0617430 AT4G35740.2 33.134 335 182 11 341 638 8 337 2.64e-37 149
Msa0617430 AT5G27680.5 32.877 219 124 7 268 471 29 239 1.65e-25 113
Msa0617430 AT5G27680.5 34.737 190 102 5 491 659 371 559 2.80e-21 100
Msa0617430 AT5G27680.6 32.877 219 124 7 268 471 159 369 2.36e-25 113
Msa0617430 AT5G27680.1 32.877 219 124 7 268 471 159 369 2.78e-25 113
Msa0617430 AT5G27680.1 34.737 190 102 5 491 659 501 689 3.24e-21 100
Msa0617430 AT5G27680.4 32.877 219 124 7 268 471 159 369 2.78e-25 113
Msa0617430 AT5G27680.4 34.737 190 102 5 491 659 501 689 3.24e-21 100
Msa0617430 AT5G27680.3 32.877 219 124 7 268 471 159 369 2.78e-25 113
Msa0617430 AT5G27680.3 34.737 190 102 5 491 659 501 689 3.24e-21 100
Msa0617430 AT5G27680.2 32.877 219 124 7 268 471 159 369 2.78e-25 113
Msa0617430 AT5G27680.2 34.737 190 102 5 491 659 501 689 3.24e-21 100
Msa0617430 AT4G33370.1 23.754 341 219 10 282 592 124 453 6.40e-15 79.3
Msa0617430 AT5G63120.2 23.599 339 230 9 274 591 184 514 8.50e-15 79.0
Msa0617430 AT1G55150.1 25.816 337 209 10 282 591 126 448 1.90e-14 77.4
Msa0617430 AT1G55150.2 26.140 329 202 10 290 591 159 473 4.20e-14 76.6
Msa0617430 AT1G31970.1 24.416 385 232 11 247 591 105 470 6.75e-14 75.9
Msa0617430 AT3G01540.1 23.782 349 228 11 271 594 174 509 8.69e-14 75.9
Msa0617430 AT3G01540.4 23.782 349 228 11 271 594 174 509 8.77e-14 75.9
Msa0617430 AT3G01540.2 23.782 349 228 11 271 594 174 509 8.77e-14 75.9
Msa0617430 AT3G01540.3 23.782 349 228 11 271 594 174 509 8.77e-14 75.9
Msa0617430 AT5G14610.6 23.757 362 222 14 267 594 171 512 9.26e-13 72.4
Msa0617430 AT5G14610.2 23.757 362 222 14 267 594 171 512 9.51e-13 72.4
Msa0617430 AT5G14610.5 23.757 362 222 14 267 594 179 520 1.13e-12 72.4
Msa0617430 AT2G42520.2 23.547 344 226 11 282 593 186 524 1.26e-12 72.0
Msa0617430 AT2G42520.1 23.547 344 226 11 282 593 186 524 1.26e-12 72.0
Msa0617430 AT2G42520.3 23.547 344 226 11 282 593 186 524 1.26e-12 72.0
Msa0617430 AT5G51280.1 33.051 118 74 1 475 592 390 502 1.65e-12 71.6
Msa0617430 AT5G14610.1 35.238 105 67 1 490 594 477 580 1.83e-12 71.6
Msa0617430 AT5G14610.7 35.238 105 67 1 490 594 278 381 1.84e-12 71.2
Msa0617430 AT5G14610.3 35.238 105 67 1 490 594 278 381 1.84e-12 71.2
Msa0617430 AT3G19760.1 28.049 164 105 2 464 614 240 403 1.84e-12 70.9
Msa0617430 AT2G33730.1 22.432 370 225 13 282 603 340 695 4.13e-12 70.5
Msa0617430 AT3G06480.1 23.324 343 235 9 274 596 454 788 1.33e-11 69.3
Msa0617430 AT1G20920.2 22.124 339 233 12 282 596 218 549 5.34e-11 67.0
Msa0617430 AT1G20920.4 22.124 339 233 12 282 596 556 887 5.50e-11 67.4
Msa0617430 AT1G20920.6 22.124 339 233 12 282 596 556 887 5.50e-11 67.4
Msa0617430 AT1G20920.3 22.124 339 233 12 282 596 556 887 5.50e-11 67.4
Msa0617430 AT1G20920.7 22.124 339 233 12 282 596 556 887 5.50e-11 67.4
Msa0617430 AT1G20920.5 22.124 339 233 12 282 596 556 887 5.50e-11 67.4
Msa0617430 AT1G20920.1 22.124 339 233 12 282 596 556 887 5.50e-11 67.4

Find 216 sgRNAs with CRISPR-Local

Find 574 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATCATTCATTATTGTATA+TGG 0.189476 4_2:-67924835 None:intergenic
GAGTAAGGGTTTACGAATTT+TGG 0.198750 4_2:-67917235 None:intergenic
CAATTGCCTCCGCTCATTTC+GGG 0.221496 4_2:+67917915 Msa0617430:CDS
ATGCTTGCAAAGGATAATAT+TGG 0.238086 4_2:+67923486 Msa0617430:CDS
TTCTTGTTCGGGAATAATTT+CGG 0.253382 4_2:-67917079 None:intergenic
CAGCCTACCCTTATACAATA+TGG 0.255516 4_2:+67924016 Msa0617430:CDS
CAGCAATAGCAGAAACCTTT+TGG 0.258260 4_2:-67921397 None:intergenic
ACATCTCATCATCATAAAAT+AGG 0.269389 4_2:-67920186 None:intergenic
GTATACCAAGATAGACTTTA+AGG 0.273733 4_2:+67924386 Msa0617430:CDS
CATAGTATACTGCAAATTTC+AGG 0.277071 4_2:+67918900 Msa0617430:CDS
GAAAATTTGGTAGTGGTAAA+AGG 0.277686 4_2:+67917463 Msa0617430:CDS
CCGATAGTCAAGGCACTAAA+AGG 0.286757 4_2:+67917360 Msa0617430:CDS
TGAAGCTTCTGATGAGAATT+TGG 0.290524 4_2:+67917683 Msa0617430:CDS
TTTGGAGAATGAAATTGATT+TGG 0.292930 4_2:-67917217 None:intergenic
ATAATATTGGATTACTTTGC+TGG 0.294888 4_2:+67923499 Msa0617430:CDS
ACAATTGCCTCCGCTCATTT+CGG 0.302918 4_2:+67917914 Msa0617430:CDS
TCGACTAATCCAAACCTTTA+GGG 0.310744 4_2:-67921810 None:intergenic
TATGGGGTAAAACCCATTTC+TGG 0.313223 4_2:+67924034 Msa0617430:CDS
TAAGGGACTCGGTGCAAATT+TGG 0.316268 4_2:-67924490 None:intergenic
AACTGATTTGTTAATTCAAC+TGG 0.319696 4_2:-67921782 None:intergenic
ACACTAGCACCTATCAAATT+AGG 0.325281 4_2:-67917330 None:intergenic
TCTTGTTCGGGAATAATTTC+GGG 0.325867 4_2:-67917078 None:intergenic
TTATTCTAAATGCGCACTTA+AGG 0.353628 4_2:+67918692 Msa0617430:CDS
TGTGCAAAACAGTTAGTATA+AGG 0.357396 4_2:+67924932 Msa0617430:three_prime_UTR
ATCAACAACCGGTTCGGCTT+CGG 0.359769 4_2:-67917271 None:intergenic
CAATGCACAGATGTCTTTAC+TGG 0.362390 4_2:-67924513 None:intergenic
GGCTGTGTCCCTTGCCCAAA+AGG 0.373276 4_2:+67921382 Msa0617430:CDS
GAAACTGGAAGAGGTGGTTT+TGG 0.373861 4_2:-67916994 None:intergenic
AATCATTCATTATTGTATAT+GGG 0.376821 4_2:-67924834 None:intergenic
CATTGATTGAAGGTGGGGCG+GGG 0.382722 4_2:+67924531 Msa0617430:three_prime_UTR
ACATACTCTTCCAGACTTCC+AGG 0.383363 4_2:-67920029 None:intergenic
TATTCTAAATGCGCACTTAA+GGG 0.388305 4_2:+67918693 Msa0617430:CDS
GGAAGTTTCTAGATTGAGTA+AGG 0.388344 4_2:-67917250 None:intergenic
GGGTTTAGGAAGGGGTTTAT+TGG 0.388852 4_2:-67917055 None:intergenic
AAGGGGAAAGATTCTTGTTC+GGG 0.395512 4_2:-67917090 None:intergenic
CATTATATGTGCGACCTAGA+TGG 0.396685 4_2:+67924678 Msa0617430:three_prime_UTR
TTACAGTTTACCTGGAAGTC+TGG 0.398808 4_2:+67920019 Msa0617430:CDS
TACGCTTGTTGTTAGTCCTT+TGG 0.400050 4_2:+67917866 Msa0617430:CDS
GGTGAACTTGGTTGTTGTCT+TGG 0.401617 4_2:-67916964 None:intergenic
GCGATTAAGAATGTGCTTGC+TGG 0.402170 4_2:+67917762 Msa0617430:CDS
TTTGTGAAATTGAATTTGAA+TGG 0.407525 4_2:+67917399 Msa0617430:CDS
AAGAAACATCCTAATTTGAT+AGG 0.411502 4_2:+67917321 Msa0617430:CDS
GCATTGATTGAAGGTGGGGC+GGG 0.412840 4_2:+67924530 Msa0617430:three_prime_UTR
AATATCCAGGGCAGACATAA+TGG 0.413104 4_2:-67918656 None:intergenic
GAGTGAGAAGATGAAGTTGA+AGG 0.417070 4_2:-67917165 None:intergenic
AAATCAGTTGTATGCCCTAA+AGG 0.419124 4_2:+67921796 Msa0617430:CDS
GTTGTTGCAACTGTGGCATT+TGG 0.419325 4_2:+67919539 Msa0617430:CDS
TTCTGTCTGTTATCTCTGGT+GGG 0.425312 4_2:+67918350 Msa0617430:CDS
GAATTTCTGTCTGTTATCTC+TGG 0.426044 4_2:+67918346 Msa0617430:CDS
AGCCTACCCTTATACAATAT+GGG 0.426403 4_2:+67924017 Msa0617430:CDS
TTTCCTGCGGGCAGATATAA+AGG 0.426465 4_2:+67923814 Msa0617430:CDS
GCTTCGTCAAGGCACAATAA+AGG 0.426914 4_2:+67918079 Msa0617430:CDS
TAGAAGTAAACGTATAAAAT+CGG 0.428317 4_2:+67917527 Msa0617430:CDS
GGACAACCTCCCGTCCCTTC+CGG 0.429624 4_2:-67920155 None:intergenic
AGAAACTTCCGAAGCCGAAC+CGG 0.431878 4_2:+67917263 Msa0617430:CDS
CGCTGCCTGTCTGTTACTCC+AGG 0.432791 4_2:+67924619 Msa0617430:three_prime_UTR
GTGAGGGGATGGAAGGGAAG+GGG 0.436156 4_2:-67917107 None:intergenic
TTTCACAAAATTTCCTTCTC+CGG 0.436617 4_2:-67917385 None:intergenic
TTTCTGTCTGTTATCTCTGG+TGG 0.437888 4_2:+67918349 Msa0617430:CDS
TGCAGAATCAACAACCGGTT+CGG 0.440717 4_2:-67917277 None:intergenic
AACTAATCCCTCAGGTCAAA+AGG 0.442552 4_2:+67924763 Msa0617430:three_prime_UTR
CCCATGTCATTTGCCACAGT+TGG 0.444192 4_2:-67921752 None:intergenic
TGATGAGGAGGAGGATGGTA+TGG 0.445277 4_2:+67917572 Msa0617430:CDS
AAGTGAGGGGATGGAAGGGA+AGG 0.445403 4_2:-67917109 None:intergenic
CATATTGTATAAGGGTAGGC+TGG 0.448678 4_2:-67924015 None:intergenic
AAGTTGTTGAAATTGATTCA+TGG 0.451160 4_2:+67917708 Msa0617430:CDS
ATCATAAAATAGGTGACAAT+AGG 0.453000 4_2:-67920176 None:intergenic
TAGGACGTGCCGGAAGGGAC+GGG 0.456722 4_2:+67920146 Msa0617430:CDS
GGACTAGATAAAAGAGATGT+TGG 0.458565 4_2:+67919566 Msa0617430:CDS
CACCACCTTAAAGTCTATCT+TGG 0.460065 4_2:-67924391 None:intergenic
TGTTGAGAATGCAAAGCAAC+AGG 0.462500 4_2:+67917596 Msa0617430:CDS
GGCTACGTACAGGAGTTGTT+TGG 0.463664 4_2:+67919374 Msa0617430:CDS
GAAGGGGAAAGATTCTTGTT+CGG 0.466450 4_2:-67917091 None:intergenic
CACAGATGTCTTTACTGGTA+AGG 0.469053 4_2:-67924508 None:intergenic
GTTCGTTGTCGGATGTTGAA+AGG 0.469108 4_2:-67917132 None:intergenic
AATTGATTTGGAGAAGAATC+CGG 0.470308 4_2:-67917205 None:intergenic
ATAGGACGTGCCGGAAGGGA+CGG 0.470495 4_2:+67920145 Msa0617430:CDS
AATAGTAATGGCAGCAATAG+TGG 0.470939 4_2:+67917495 Msa0617430:CDS
TGCAACTGTGGCATTTGGCA+TGG 0.471083 4_2:+67919544 Msa0617430:CDS
AGATCCGTCGGAGTCTGAAT+CGG 0.477155 4_2:-67916923 None:intergenic
AAAGGAAGTGAGGGGATGGA+AGG 0.478336 4_2:-67917114 None:intergenic
CGCTCTTCTAAGCAGTGCTC+AGG 0.478699 4_2:+67917938 Msa0617430:CDS
AGTGAGGGGATGGAAGGGAA+GGG 0.479047 4_2:-67917108 None:intergenic
ATTACCCTCGCAACAGCTCT+TGG 0.487754 4_2:-67923976 None:intergenic
TCTTCATTCAAGAATCGCTC+TGG 0.488566 4_2:-67918325 None:intergenic
AAGGAAGTGAGGGGATGGAA+GGG 0.488949 4_2:-67917113 None:intergenic
ATATCAAACCTGCGTGAAGC+AGG 0.492622 4_2:-67920421 None:intergenic
GAATGGGCATTGTAGGAGAT+AGG 0.495642 4_2:+67920127 Msa0617430:intron
TCCCTCAGGTCAAAAGGAAA+AGG 0.497113 4_2:+67924769 Msa0617430:three_prime_UTR
ATTGATTGAAGGTGGGGCGG+GGG 0.498392 4_2:+67924532 Msa0617430:three_prime_UTR
GCAACTGTGGCATTTGGCAT+GGG 0.498488 4_2:+67919545 Msa0617430:CDS
TTTGGCGGTGATGGTGAACT+TGG 0.500420 4_2:-67916976 None:intergenic
CGATTAAGAATGTGCTTGCT+GGG 0.501188 4_2:+67917763 Msa0617430:CDS
GAGCGTCAGACGTTCGTTGT+CGG 0.501622 4_2:-67917143 None:intergenic
TTGTGAAATTGAATTTGAAT+GGG 0.503178 4_2:+67917400 Msa0617430:CDS
AGATGCCATTATGTCTGCCC+TGG 0.503557 4_2:+67918651 Msa0617430:CDS
GTCTTTACTGGTAAGGGACT+CGG 0.505202 4_2:-67924501 None:intergenic
TTATAGAATGAAAGACCTAC+TGG 0.506852 4_2:+67918837 Msa0617430:intron
GATCGGAGAAGAAGAACAAA+GGG 0.512824 4_2:-67916881 None:intergenic
AACAGGAAAAGAAGAATGGT+TGG 0.514174 4_2:+67917613 Msa0617430:CDS
TCCAACTGTGGCAAATGACA+TGG 0.515681 4_2:+67921751 Msa0617430:CDS
GCACTAAAAGGCGCCGGAGA+AGG 0.515717 4_2:+67917372 Msa0617430:CDS
GTTGAAAGGAAGTGAGGGGA+TGG 0.516695 4_2:-67917118 None:intergenic
ATCCTTGATTCCTTCCATCT+AGG 0.520433 4_2:-67924692 None:intergenic
GGTGGTGATGGAAGCAGCTA+AGG 0.525244 4_2:+67924407 Msa0617430:CDS
AATTGAATTTGAATGGGAAG+AGG 0.525991 4_2:+67917406 Msa0617430:CDS
GATAGACTTTAAGGTGGTGA+TGG 0.527217 4_2:+67924395 Msa0617430:CDS
GCAAGAAAATTGATCAAAGC+AGG 0.527941 4_2:+67923542 Msa0617430:CDS
TGCATTGATTGAAGGTGGGG+CGG 0.528493 4_2:+67924529 Msa0617430:three_prime_UTR
ATCACACTTCATGCTTGCAA+AGG 0.529036 4_2:+67923476 Msa0617430:CDS
GAACTTGGTTGTTGTCTTGG+CGG 0.531364 4_2:-67916961 None:intergenic
ATCATTCATTATTGTATATG+GGG 0.531507 4_2:-67924833 None:intergenic
GTTGTAGAAACTAATCCCTC+AGG 0.534801 4_2:+67924755 Msa0617430:three_prime_UTR
GGAGAAGAATCCGGCAGGGA+GGG 0.536997 4_2:-67917196 None:intergenic
CGGATGTTGAAAGGAAGTGA+GGG 0.537562 4_2:-67917123 None:intergenic
CTATTGCTGTGATTCTGAAA+AGG 0.538068 4_2:+67921411 Msa0617430:CDS
TTGTTTGAAACTGGAAGAGG+TGG 0.539207 4_2:-67917000 None:intergenic
ACAGGAAAAGAAGAATGGTT+GGG 0.539988 4_2:+67917614 Msa0617430:CDS
CCTGCTGACAAAAGCTCCTG+TGG 0.542681 4_2:+67920373 Msa0617430:CDS
TCATAGTGGTATTTCTGCAA+AGG 0.548833 4_2:+67919346 Msa0617430:CDS
CTTCATAAGAGTCTTAATGT+AGG 0.549838 4_2:+67918586 Msa0617430:CDS
GACCTAGATGGAAGGAATCA+AGG 0.549875 4_2:+67924690 Msa0617430:three_prime_UTR
GATTTGTGCAAGGAATATCC+AGG 0.550259 4_2:-67918669 None:intergenic
TTATTGTGCCTTGACGAAGC+TGG 0.551129 4_2:-67918076 None:intergenic
GTAATTCATTACAGTTTACC+TGG 0.551307 4_2:+67920011 Msa0617430:CDS
AAATGAATGCAAAGTGTTGG+AGG 0.552542 4_2:+67917638 Msa0617430:CDS
AAAGGAACGTGGCTACGTAC+AGG 0.554701 4_2:+67919364 Msa0617430:CDS
AACTTCGTAGTCTAATGTAC+AGG 0.555989 4_2:+67920215 Msa0617430:CDS
TCTAGGTCGCACATATAATG+AGG 0.557415 4_2:-67924675 None:intergenic
TCGGATGTTGAAAGGAAGTG+AGG 0.557472 4_2:-67917124 None:intergenic
CATACGCAGTCGTTTCCTGC+GGG 0.558788 4_2:+67923802 Msa0617430:intron
CTGGAGTAACAGACAGGCAG+CGG 0.559802 4_2:-67924618 None:intergenic
GACATCTGTGCATTGATTGA+AGG 0.562300 4_2:+67924521 Msa0617430:three_prime_UTR
ATATTGTATAAGGGTAGGCT+GGG 0.562876 4_2:-67924014 None:intergenic
CGATGATGATGATGAGGAGG+AGG 0.563127 4_2:+67917563 Msa0617430:CDS
GTCAAGGCACTAAAAGGCGC+CGG 0.563462 4_2:+67917366 Msa0617430:CDS
ATCATTTAGAGTTATCATAG+TGG 0.565678 4_2:+67919332 Msa0617430:intron
AAGCAACAGGAAAAGAAGAA+TGG 0.566070 4_2:+67917609 Msa0617430:CDS
GATGAGGAGGAGGATGGTAT+GGG 0.566294 4_2:+67917573 Msa0617430:CDS
AGGCGATGATGATGATGAGG+AGG 0.566831 4_2:+67917560 Msa0617430:CDS
ATAAAATCGGAACACAAAGA+AGG 0.567266 4_2:+67917540 Msa0617430:CDS
TTTGAATGATAACAACATCA+AGG 0.569180 4_2:+67919217 Msa0617430:CDS
GGAAAATGAATGCAAAGTGT+TGG 0.569609 4_2:+67917635 Msa0617430:CDS
CTCGGTGCAAATTTGGCAGA+TGG 0.570380 4_2:-67924483 None:intergenic
TCTATCGAAACCCTCCCTGC+CGG 0.570984 4_2:+67917186 Msa0617430:CDS
GGATCGGAGAAGAAGAACAA+AGG 0.573245 4_2:-67916882 None:intergenic
GCTCTGAGTCTCATGAATGA+AGG 0.573682 4_2:-67918556 None:intergenic
ATCAATAACAACAAGTGAGA+CGG 0.574473 4_2:-67918377 None:intergenic
ACCCCATATTGTATAAGGGT+AGG 0.574497 4_2:-67924019 None:intergenic
TGAAGAAATGTGAGATCCGT+CGG 0.576644 4_2:-67916935 None:intergenic
CTTGTTCGGGAATAATTTCG+GGG 0.580017 4_2:-67917077 None:intergenic
GATTTGGAGAAGAATCCGGC+AGG 0.580592 4_2:-67917201 None:intergenic
GAGAAGAAGAACAAAGGGAA+AGG 0.582175 4_2:-67916876 None:intergenic
TTCAGATCTGAAAATAAGCA+CGG 0.583131 4_2:+67921710 Msa0617430:intron
AGAAGAAGAACAAAGGGAAA+GGG 0.583287 4_2:-67916875 None:intergenic
CATAATGGCATCTAAAGTCA+TGG 0.585243 4_2:-67918641 None:intergenic
ACAGATGTCTTTACTGGTAA+GGG 0.586297 4_2:-67924507 None:intergenic
TGTGGTAACGCCGATAGTCA+AGG 0.586656 4_2:+67917350 Msa0617430:CDS
AAGCTGGTTGAGTGTTTCAG+AGG 0.587339 4_2:-67918060 None:intergenic
GGAGATAGGACGTGCCGGAA+GGG 0.588307 4_2:+67920141 Msa0617430:intron
AAGTCTGGAAGAGTATGTAC+AGG 0.589387 4_2:+67920034 Msa0617430:CDS
CCAACTGTGGCAAATGACAT+GGG 0.590683 4_2:+67921752 Msa0617430:CDS
GATGATGATGAGGAGGAGGA+TGG 0.591373 4_2:+67917567 Msa0617430:CDS
GAAGTTTCTAGATTGAGTAA+GGG 0.593349 4_2:-67917249 None:intergenic
CTGCTGACAAAAGCTCCTGT+GGG 0.597436 4_2:+67920374 Msa0617430:CDS
GACGTGCCGGAAGGGACGGG+AGG 0.597783 4_2:+67920149 Msa0617430:CDS
AAGCACATTGTATATCTGAA+TGG 0.600670 4_2:+67918401 Msa0617430:CDS
TGATAACAACATCAAGGCAA+AGG 0.601528 4_2:+67919223 Msa0617430:CDS
TTGTAGGAGATAGGACGTGC+CGG 0.602571 4_2:+67920136 Msa0617430:intron
TAATTTGATAGGTGCTAGTG+TGG 0.604367 4_2:+67917332 Msa0617430:CDS
TTACACCAAGAGCTGTTGCG+AGG 0.607759 4_2:+67923971 Msa0617430:CDS
AGGAGATAGGACGTGCCGGA+AGG 0.609542 4_2:+67920140 Msa0617430:intron
TTTAGAATAAGATTTGTGCA+AGG 0.610553 4_2:-67918679 None:intergenic
TATGAAGGTTGTTGCAACTG+TGG 0.610759 4_2:+67919532 Msa0617430:intron
TACACCAAGAGCTGTTGCGA+GGG 0.610987 4_2:+67923972 Msa0617430:CDS
AATCTATGTGATAAGATGAA+CGG 0.611074 4_2:+67923439 Msa0617430:CDS
GCCTACCCTTATACAATATG+GGG 0.613022 4_2:+67924018 Msa0617430:CDS
TGAGTCTCATGAATGAAGGT+CGG 0.613163 4_2:-67918552 None:intergenic
ATCTGTGCATTGATTGAAGG+TGG 0.614434 4_2:+67924524 Msa0617430:three_prime_UTR
CTTGACCTGGAGTAACAGAC+AGG 0.614454 4_2:-67924624 None:intergenic
TCTGTGCATTGATTGAAGGT+GGG 0.615355 4_2:+67924525 Msa0617430:three_prime_UTR
TCAAAGAACCTGCTTCACGC+AGG 0.615491 4_2:+67920413 Msa0617430:CDS
AGAAGGCGATGATGATGATG+AGG 0.617816 4_2:+67917557 Msa0617430:CDS
CAGGTTTGATATGAAAGAAG+AGG 0.626887 4_2:+67920432 Msa0617430:CDS
CAACTGTGGCAAATGACATG+GGG 0.630786 4_2:+67921753 Msa0617430:CDS
TCACCTTTATATCTGCCCGC+AGG 0.632718 4_2:-67923817 None:intergenic
ACATGGCGCGAAACAACTGC+AGG 0.634740 4_2:-67924572 None:intergenic
TCAATCATCAAAGCTACCAA+AGG 0.636069 4_2:-67917882 None:intergenic
ACACTCAACCAGCTTCGTCA+AGG 0.636248 4_2:+67918068 Msa0617430:CDS
AGAAGAGCGCCCGAAATGAG+CGG 0.636804 4_2:-67917924 None:intergenic
CTAGGTCGCACATATAATGA+GGG 0.638576 4_2:-67924674 None:intergenic
TTGTTCGGGAATAATTTCGG+GGG 0.640718 4_2:-67917076 None:intergenic
GGTATTTCTGCAAAGGAACG+TGG 0.641724 4_2:+67919353 Msa0617430:CDS
ATATGTGCGACCTAGATGGA+AGG 0.643950 4_2:+67924682 Msa0617430:three_prime_UTR
AGGGATTAGTTTCTACAACA+AGG 0.644393 4_2:-67924751 None:intergenic
GAGTAACAGACAGGCAGCGG+CGG 0.644678 4_2:-67924615 None:intergenic
AGAAGAACAAAGGGAAAGGG+TGG 0.649089 4_2:-67916872 None:intergenic
ACACACGTTGCATTTGTCTG+TGG 0.649253 4_2:-67921101 None:intergenic
CTGTGCATTGATTGAAGGTG+GGG 0.649957 4_2:+67924526 Msa0617430:three_prime_UTR
AGCGACTTCCCAGCACCCGT+CGG 0.662358 4_2:-67917807 None:intergenic
CTAACAACAAGCGTAATCCC+AGG 0.664152 4_2:-67917858 None:intergenic
ATTTGGAGAAGAATCCGGCA+GGG 0.667823 4_2:-67917200 None:intergenic
AAGACTTCATAAGCACCAGT+AGG 0.669892 4_2:-67918852 None:intergenic
ACATACGCAGTCGTTTCCTG+CGG 0.674845 4_2:+67923801 Msa0617430:intron
ATTTGTGCAAGGAATATCCA+GGG 0.675764 4_2:-67918668 None:intergenic
TGGAGAAGAATCCGGCAGGG+AGG 0.677448 4_2:-67917197 None:intergenic
AGAGCGCCCGAAATGAGCGG+AGG 0.689601 4_2:-67917921 None:intergenic
TGTTCGGGAATAATTTCGGG+GGG 0.690236 4_2:-67917075 None:intergenic
GCTGTTGCGAGGGTAATGCA+CGG 0.692274 4_2:+67923982 Msa0617430:CDS
AACTGTGGCAAATGACATGG+GGG 0.692492 4_2:+67921754 Msa0617430:CDS
AATTTCAACAGTGAATAACA+TGG 0.699307 4_2:-67924589 None:intergenic
GATTCCGATTCAGACTCCGA+CGG 0.702398 4_2:+67916919 Msa0617430:CDS
TGAATGCAAAGTGTTGGAGG+AGG 0.703820 4_2:+67917641 Msa0617430:CDS
TACCAAGATAGACTTTAAGG+TGG 0.711526 4_2:+67924389 Msa0617430:CDS
GGATGTTGAAAGGAAGTGAG+GGG 0.717854 4_2:-67917122 None:intergenic
TGGTTCAAACAAGATCAGAG+TGG 0.733769 4_2:+67919394 Msa0617430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATCTATATTTATATATATG+TGG + chr4_2:67919133-67919152 Msa0617430:intron 10.0%
!! ATCTATATTTATATATATGT+GGG + chr4_2:67919134-67919153 Msa0617430:intron 10.0%
!!! AAATTTTTAAATTGCAAAAT+GGG + chr4_2:67919819-67919838 Msa0617430:intron 10.0%
!!! TTTTTCTTATTAAATAGAAT+GGG + chr4_2:67920111-67920130 Msa0617430:intron 10.0%
!! TAAACATATATTAAATTTCT+TGG + chr4_2:67921440-67921459 Msa0617430:intron 10.0%
!!! GTTTAATTTGAAAATTTTAA+GGG - chr4_2:67922086-67922105 None:intergenic 10.0%
!!! AGTTTAATTTGAAAATTTTA+AGG - chr4_2:67922087-67922106 None:intergenic 10.0%
!!! TATATGATCTTAAATTTTTT+TGG + chr4_2:67923641-67923660 Msa0617430:intron 10.0%
!!! ATATGATCTTAAATTTTTTT+GGG + chr4_2:67923642-67923661 Msa0617430:intron 10.0%
!!! ATTATTTCTGTGAATTAATA+AGG + chr4_2:67918457-67918476 Msa0617430:intron 15.0%
!!! TTATATTTTGAAATTCTTAC+AGG + chr4_2:67918518-67918537 Msa0617430:intron 15.0%
!!! ATTTTTCAATTTTAAGGTAT+TGG + chr4_2:67918939-67918958 Msa0617430:intron 15.0%
!!! TTTTTCAATTTTAAGGTATT+GGG + chr4_2:67918940-67918959 Msa0617430:intron 15.0%
!!! CAAATTTTTAAATTGCAAAA+TGG + chr4_2:67919818-67919837 Msa0617430:intron 15.0%
!!! AATTTTTAAATTGCAAAATG+GGG + chr4_2:67919820-67919839 Msa0617430:intron 15.0%
!!! GTTTTTCTTATTAAATAGAA+TGG + chr4_2:67920110-67920129 Msa0617430:intron 15.0%
!!! TGATAGAGTTTTATTTTTTA+TGG + chr4_2:67920853-67920872 Msa0617430:intron 15.0%
!! TTAAACCATAGTATAATTTA+CGG + chr4_2:67921227-67921246 Msa0617430:intron 15.0%
!!! TGGCTTATATTTTTAATTTT+TGG + chr4_2:67921343-67921362 Msa0617430:intron 15.0%
!!! TTTTCAAATTAAACTAAGAA+TGG + chr4_2:67922092-67922111 Msa0617430:intron 15.0%
!! ATTGTAGTATTTATATTTAG+AGG + chr4_2:67922993-67923012 Msa0617430:intron 15.0%
!!! ATATTTTATATCATTCATCT+AGG + chr4_2:67924319-67924338 Msa0617430:intron 15.0%
!! GAAGAACTTAAAAAATTTAT+TGG + chr4_2:67924429-67924448 Msa0617430:CDS 15.0%
!! AATCATTCATTATTGTATAT+GGG - chr4_2:67924837-67924856 None:intergenic 15.0%
!!! TGATTCTACTTTTTTTTTTT+AGG + chr4_2:67924852-67924871 Msa0617430:three_prime_UTR 15.0%
!!! GATTCTACTTTTTTTTTTTA+GGG + chr4_2:67924853-67924872 Msa0617430:three_prime_UTR 15.0%
!! TTTGTGAAATTGAATTTGAA+TGG + chr4_2:67917399-67917418 Msa0617430:CDS 20.0%
!! TTGTGAAATTGAATTTGAAT+GGG + chr4_2:67917400-67917419 Msa0617430:CDS 20.0%
!!! AGGAAAAAGTTTTTGAATAA+AGG + chr4_2:67917426-67917445 Msa0617430:CDS 20.0%
!!! GGAAAAAGTTTTTGAATAAA+GGG + chr4_2:67917427-67917446 Msa0617430:CDS 20.0%
!!! AGGTATTTTAGAAATAGTAA+TGG + chr4_2:67917483-67917502 Msa0617430:CDS 20.0%
!! TAGAAGTAAACGTATAAAAT+CGG + chr4_2:67917527-67917546 Msa0617430:CDS 20.0%
!!! TGAGAATGTTGATTATTTAT+AGG + chr4_2:67918187-67918206 Msa0617430:intron 20.0%
!! ATTGCAATTATAATTCTTAC+AGG + chr4_2:67918288-67918307 Msa0617430:intron 20.0%
!! TCAAAATATAAAGATCAACA+CGG - chr4_2:67918509-67918528 None:intergenic 20.0%
!!! GACTTCATTTTTCAATTTTA+AGG + chr4_2:67918933-67918952 Msa0617430:intron 20.0%
!!! GATTTTATTTCAAATACTGT+AGG - chr4_2:67919019-67919038 None:intergenic 20.0%
!! GTTATTAAATAATGTGTTTC+AGG + chr4_2:67919056-67919075 Msa0617430:intron 20.0%
!!! TTCTCAAAAGATTTTACTTA+TGG + chr4_2:67919792-67919811 Msa0617430:intron 20.0%
!!! ATTTTTAAATTGCAAAATGG+GGG + chr4_2:67919821-67919840 Msa0617430:intron 20.0%
!! TGTATATTAGAATTGAGTAA+AGG - chr4_2:67920459-67920478 None:intergenic 20.0%
!! CAATTACAAATTCCTAAAAA+TGG - chr4_2:67920715-67920734 None:intergenic 20.0%
!! AAAATTAACAAACACAAGAT+GGG - chr4_2:67921278-67921297 None:intergenic 20.0%
!! AAAAATTAACAAACACAAGA+TGG - chr4_2:67921279-67921298 None:intergenic 20.0%
!!! AAATTTTCTGTTTCTACAAA+GGG + chr4_2:67921553-67921572 Msa0617430:intron 20.0%
!!! AGAATTTTTCACAAATAACA+AGG - chr4_2:67922829-67922848 None:intergenic 20.0%
!! AGAAATAACTTATGAAATGA+AGG + chr4_2:67922860-67922879 Msa0617430:intron 20.0%
!! AGATTGAAAAGTAGTTATTA+TGG + chr4_2:67923244-67923263 Msa0617430:intron 20.0%
!!! TTTTTTTGGGTATTGAAAAT+TGG + chr4_2:67923655-67923674 Msa0617430:intron 20.0%
!!! CACTTACAATAATAATTTTG+GGG - chr4_2:67923705-67923724 None:intergenic 20.0%
!!! GCACTTACAATAATAATTTT+GGG - chr4_2:67923706-67923725 None:intergenic 20.0%
!!! TGCACTTACAATAATAATTT+TGG - chr4_2:67923707-67923726 None:intergenic 20.0%
!! TTGTTGGTATGAAATAAATT+GGG + chr4_2:67924094-67924113 Msa0617430:intron 20.0%
!! TTACTTATTGATGTTATTGA+TGG - chr4_2:67924152-67924171 None:intergenic 20.0%
!! AACTTATGAAATAGAAAATC+TGG - chr4_2:67924182-67924201 None:intergenic 20.0%
!! ATTCAATGTTAAACAAAAGT+AGG - chr4_2:67924272-67924291 None:intergenic 20.0%
!! TAACATTGAATGTGTATTAT+TGG + chr4_2:67924281-67924300 Msa0617430:intron 20.0%
!! TAAAACTGAGATTTAAATTG+TGG + chr4_2:67924350-67924369 Msa0617430:intron 20.0%
!! ATCATTCATTATTGTATATG+GGG - chr4_2:67924836-67924855 None:intergenic 20.0%
!! GAATCATTCATTATTGTATA+TGG - chr4_2:67924838-67924857 None:intergenic 20.0%
! TTCCAGTTTCAAACAAAAAA+TGG + chr4_2:67917007-67917026 Msa0617430:CDS 25.0%
!!! TTCCATTTTTTGTTTGAAAC+TGG - chr4_2:67917012-67917031 None:intergenic 25.0%
! TTTGGAGAATGAAATTGATT+TGG - chr4_2:67917220-67917239 None:intergenic 25.0%
! AAGAAACATCCTAATTTGAT+AGG + chr4_2:67917321-67917340 Msa0617430:CDS 25.0%
!! AAAAGTTTTTGAATAAAGGG+TGG + chr4_2:67917430-67917449 Msa0617430:CDS 25.0%
! AAAAATGGAAAATTTGGTAG+TGG + chr4_2:67917456-67917475 Msa0617430:CDS 25.0%
!! AAGTTGTTGAAATTGATTCA+TGG + chr4_2:67917708-67917727 Msa0617430:CDS 25.0%
! TCAAATGTGATATGTGAAAA+TGG - chr4_2:67918213-67918232 None:intergenic 25.0%
!! TTTAGAATAAGATTTGTGCA+AGG - chr4_2:67918682-67918701 None:intergenic 25.0%
! CTGTGTCTTTGATAAAAAAT+AGG + chr4_2:67918731-67918750 Msa0617430:intron 25.0%
! TACGTTAAAAAACTCAGATA+AGG - chr4_2:67918809-67918828 None:intergenic 25.0%
! TTTGAATGATAACAACATCA+AGG + chr4_2:67919217-67919236 Msa0617430:CDS 25.0%
!! ATCATTTAGAGTTATCATAG+TGG + chr4_2:67919332-67919351 Msa0617430:intron 25.0%
!! ACTCAAAAGTCTAAAACATA+AGG - chr4_2:67919735-67919754 None:intergenic 25.0%
! ATCATAAAATAGGTGACAAT+AGG - chr4_2:67920179-67920198 None:intergenic 25.0%
! ACATCTCATCATCATAAAAT+AGG - chr4_2:67920189-67920208 None:intergenic 25.0%
! TGAAGAACAATTTGAAAGTT+TGG - chr4_2:67920280-67920299 None:intergenic 25.0%
! AAATTTATGATAACCATCTC+AGG + chr4_2:67920605-67920624 Msa0617430:intron 25.0%
!!! TTTGACTAAAAGCCATTTTT+AGG + chr4_2:67920700-67920719 Msa0617430:intron 25.0%
!! CACATTTTTGTACAAAAACA+AGG - chr4_2:67920740-67920759 None:intergenic 25.0%
!!! CTTGTTTTTGTACAAAAATG+TGG + chr4_2:67920738-67920757 Msa0617430:intron 25.0%
!! TTGTACAAAAATGTGGTTTT+TGG + chr4_2:67920745-67920764 Msa0617430:intron 25.0%
! GTGCATATTTATTTCGTAAA+TGG - chr4_2:67920912-67920931 None:intergenic 25.0%
! TAACAAAACTTTCTCTTGTA+AGG + chr4_2:67920939-67920958 Msa0617430:intron 25.0%
! TCAATCCGTAAATTATACTA+TGG - chr4_2:67921235-67921254 None:intergenic 25.0%
! CTTTGTAGAAACAGAAAATT+TGG - chr4_2:67921554-67921573 None:intergenic 25.0%
!!! CAAATTTTCTGTTTCTACAA+AGG + chr4_2:67921552-67921571 Msa0617430:intron 25.0%
!!! AACTGATTTGTTAATTCAAC+TGG - chr4_2:67921785-67921804 None:intergenic 25.0%
!!! CGTAAATCAGTATTTTTAAC+AGG - chr4_2:67922230-67922249 None:intergenic 25.0%
! TTTCCTTGTCTTAAAATCTT+TGG + chr4_2:67922367-67922386 Msa0617430:intron 25.0%
!!! TCTATTTTGACTTTCTAGTT+TGG + chr4_2:67922721-67922740 Msa0617430:intron 25.0%
!!! CTATTTTGACTTTCTAGTTT+GGG + chr4_2:67922722-67922741 Msa0617430:intron 25.0%
! TGTGAAAAATTCTCAGTTTA+AGG + chr4_2:67922836-67922855 Msa0617430:intron 25.0%
! GTGAAAAATTCTCAGTTTAA+GGG + chr4_2:67922837-67922856 Msa0617430:intron 25.0%
! ATAGAGAAAAAAAGTCTGTT+GGG - chr4_2:67922917-67922936 None:intergenic 25.0%
! CTGAGTAAATATAAGAGAAA+TGG - chr4_2:67923182-67923201 None:intergenic 25.0%
! CATTTCTCTTATATTTACTC+AGG + chr4_2:67923180-67923199 Msa0617430:intron 25.0%
!! TATGAACAGTTTTCCTTTTA+CGG + chr4_2:67923214-67923233 Msa0617430:intron 25.0%
!!! TTTTGTGTGTTATTTTCTCA+TGG + chr4_2:67923354-67923373 Msa0617430:intron 25.0%
! AATCTATGTGATAAGATGAA+CGG + chr4_2:67923439-67923458 Msa0617430:CDS 25.0%
! ATAATATTGGATTACTTTGC+TGG + chr4_2:67923499-67923518 Msa0617430:CDS 25.0%
! AACCTACTTATATGATGATA+AGG + chr4_2:67923726-67923745 Msa0617430:intron 25.0%
! ATCCTTATCATCATATAAGT+AGG - chr4_2:67923731-67923750 None:intergenic 25.0%
!! TTTTACCCCATATTGTATAA+GGG - chr4_2:67924026-67924045 None:intergenic 25.0%
! TTCATACCAACAAGTATTTA+AGG - chr4_2:67924087-67924106 None:intergenic 25.0%
! CTTGTTGGTATGAAATAAAT+TGG + chr4_2:67924093-67924112 Msa0617430:intron 25.0%
!! AAATAAATTGGGTGACTTTT+AGG + chr4_2:67924105-67924124 Msa0617430:intron 25.0%
! TTATTGATGTTATTGATGGA+AGG - chr4_2:67924148-67924167 None:intergenic 25.0%
! TGAAATAGAAAATCTGGAAA+AGG - chr4_2:67924176-67924195 None:intergenic 25.0%
! GTGGAAAAAAATGAAATGAA+TGG - chr4_2:67924248-67924267 None:intergenic 25.0%
! AATTTCAACAGTGAATAACA+TGG - chr4_2:67924592-67924611 None:intergenic 25.0%
!!! TCAAACTGCATTTTTTGGAT+CGG - chr4_2:67916901-67916920 None:intergenic 30.0%
!! TTTTTGTTTGAAACTGGAAG+AGG - chr4_2:67917006-67917025 None:intergenic 30.0%
!! TTTATTGGATTTTGAGGGTT+TGG - chr4_2:67917043-67917062 None:intergenic 30.0%
TTCTTGTTCGGGAATAATTT+CGG - chr4_2:67917082-67917101 None:intergenic 30.0%
!! AATTGATTTGGAGAAGAATC+CGG - chr4_2:67917208-67917227 None:intergenic 30.0%
! GAAGTTTCTAGATTGAGTAA+GGG - chr4_2:67917252-67917271 None:intergenic 30.0%
TTTCACAAAATTTCCTTCTC+CGG - chr4_2:67917388-67917407 None:intergenic 30.0%
AATTGAATTTGAATGGGAAG+AGG + chr4_2:67917406-67917425 Msa0617430:CDS 30.0%
TGGACGAAAAATGGAAAATT+TGG + chr4_2:67917450-67917469 Msa0617430:CDS 30.0%
!! GAAAATTTGGTAGTGGTAAA+AGG + chr4_2:67917463-67917482 Msa0617430:CDS 30.0%
ATAAAATCGGAACACAAAGA+AGG + chr4_2:67917540-67917559 Msa0617430:CDS 30.0%
TTTCTACAAAAGAAGATCCA+AGG - chr4_2:67918135-67918154 None:intergenic 30.0%
ATCAATAACAACAAGTGAGA+CGG - chr4_2:67918380-67918399 None:intergenic 30.0%
AAGCACATTGTATATCTGAA+TGG + chr4_2:67918401-67918420 Msa0617430:CDS 30.0%
ATTGTATATCTGAATGGTGA+GGG + chr4_2:67918407-67918426 Msa0617430:intron 30.0%
AAATATAAAGATCAACACGG+AGG - chr4_2:67918506-67918525 None:intergenic 30.0%
CTTCATAAGAGTCTTAATGT+AGG + chr4_2:67918586-67918605 Msa0617430:CDS 30.0%
TTATTCTAAATGCGCACTTA+AGG + chr4_2:67918692-67918711 Msa0617430:CDS 30.0%
TATTCTAAATGCGCACTTAA+GGG + chr4_2:67918693-67918712 Msa0617430:CDS 30.0%
TTATAGAATGAAAGACCTAC+TGG + chr4_2:67918837-67918856 Msa0617430:intron 30.0%
CATAGTATACTGCAAATTTC+AGG + chr4_2:67918900-67918919 Msa0617430:CDS 30.0%
!!! AATTTTAAGGTATTGGGTCT+CGG + chr4_2:67918946-67918965 Msa0617430:intron 30.0%
GATTTAACATTCAGTGTCAA+GGG - chr4_2:67919295-67919314 None:intergenic 30.0%
AGATTTAACATTCAGTGTCA+AGG - chr4_2:67919296-67919315 None:intergenic 30.0%
!!! TACCTTGCCATTTTTTATGA+AGG + chr4_2:67919517-67919536 Msa0617430:intron 30.0%
AACCTTCATAAAAAATGGCA+AGG - chr4_2:67919522-67919541 None:intergenic 30.0%
GCAACAACCTTCATAAAAAA+TGG - chr4_2:67919527-67919546 None:intergenic 30.0%
GTAATTCATTACAGTTTACC+TGG + chr4_2:67920011-67920030 Msa0617430:CDS 30.0%
! TTAAATAGAATGGGCATTGT+AGG + chr4_2:67920120-67920139 Msa0617430:intron 30.0%
TATTTGGTCTCAAGTTAATC+TGG - chr4_2:67920808-67920827 None:intergenic 30.0%
TTCGTAAATGGATAAATGAC+TGG - chr4_2:67920900-67920919 None:intergenic 30.0%
TCTCCAATATTTCCTTTACT+AGG + chr4_2:67921019-67921038 Msa0617430:intron 30.0%
TCACCTAGTAAAGGAAATAT+TGG - chr4_2:67921025-67921044 None:intergenic 30.0%
CATATTGTACATGCAATTGA+AGG - chr4_2:67921158-67921177 None:intergenic 30.0%
AGCATACAGTTTAGATAAGT+AGG - chr4_2:67921208-67921227 None:intergenic 30.0%
TTGTTTGAGAGATTATTCAG+TGG + chr4_2:67921323-67921342 Msa0617430:intron 30.0%
ATTCTAGTGTGATCACAATA+AGG - chr4_2:67921629-67921648 None:intergenic 30.0%
TTCAGATCTGAAAATAAGCA+CGG + chr4_2:67921710-67921729 Msa0617430:intron 30.0%
! TACTTTTGATATTCCAACTG+TGG + chr4_2:67921739-67921758 Msa0617430:CDS 30.0%
!!! TTTTTTCTCAAGCTTGTATG+TGG + chr4_2:67921843-67921862 Msa0617430:intron 30.0%
TTCTCTCACACTTCATTATT+GGG - chr4_2:67921955-67921974 None:intergenic 30.0%
TTTCTCTCACACTTCATTAT+TGG - chr4_2:67921956-67921975 None:intergenic 30.0%
!! TGGATAAAGCTATTGATTCA+TGG + chr4_2:67922112-67922131 Msa0617430:intron 30.0%
! TTGATAGTAATTCAAACGAC+AGG + chr4_2:67922155-67922174 Msa0617430:intron 30.0%
TGATAGTAATTCAAACGACA+GGG + chr4_2:67922156-67922175 Msa0617430:intron 30.0%
! ATTTTTAACAGGAGTAGTGA+AGG - chr4_2:67922219-67922238 None:intergenic 30.0%
!!! ATGCCAAAGATTTTAAGACA+AGG - chr4_2:67922373-67922392 None:intergenic 30.0%
CTTAAAATCTTTGGCATCAT+AGG + chr4_2:67922376-67922395 Msa0617430:intron 30.0%
GAAACAGTATAATTGTGTTC+TGG + chr4_2:67922789-67922808 Msa0617430:intron 30.0%
AACTTATGAAATGAAGGACA+TGG + chr4_2:67922866-67922885 Msa0617430:intron 30.0%
GATAGAGAAAAAAAGTCTGT+TGG - chr4_2:67922918-67922937 None:intergenic 30.0%
AGATATTACACGATGGTTAT+CGG + chr4_2:67922941-67922960 Msa0617430:intron 30.0%
TCTAACATTCACTCTCTTAT+TGG + chr4_2:67923044-67923063 Msa0617430:intron 30.0%
GTAAAAGGAAAACTGTTCAT+AGG - chr4_2:67923215-67923234 None:intergenic 30.0%
CAATCTTTGAATACCGTAAA+AGG - chr4_2:67923230-67923249 None:intergenic 30.0%
ATGCTTGCAAAGGATAATAT+TGG + chr4_2:67923486-67923505 Msa0617430:CDS 30.0%
TGTTCTTTAGTACAGAACTT+AGG - chr4_2:67923587-67923606 None:intergenic 30.0%
!!! ATAATTTTGGGGCATAAACT+AGG - chr4_2:67923694-67923713 None:intergenic 30.0%
!!! GCTATTTTAGTACAAGATCA+TGG - chr4_2:67923773-67923792 None:intergenic 30.0%
! TGAAAATTACCTGTTTCTCT+GGG + chr4_2:67923908-67923927 Msa0617430:intron 30.0%
! GTTTTACCCCATATTGTATA+AGG - chr4_2:67924027-67924046 None:intergenic 30.0%
!! TTTTTCAACGTACCAGAAAT+GGG - chr4_2:67924049-67924068 None:intergenic 30.0%
!! AGCTTTGATTTGAGAAACAA+AGG + chr4_2:67924204-67924223 Msa0617430:intron 30.0%
!! GCTTTGATTTGAGAAACAAA+GGG + chr4_2:67924205-67924224 Msa0617430:intron 30.0%
ATGTTAAACAAAAGTAGGAG+TGG - chr4_2:67924267-67924286 None:intergenic 30.0%
! AGATTTAAATTGTGGATTGC+AGG + chr4_2:67924358-67924377 Msa0617430:intron 30.0%
! GATTTAAATTGTGGATTGCA+GGG + chr4_2:67924359-67924378 Msa0617430:intron 30.0%
! ATTTAAATTGTGGATTGCAG+GGG + chr4_2:67924360-67924379 Msa0617430:intron 30.0%
GTATACCAAGATAGACTTTA+AGG + chr4_2:67924386-67924405 Msa0617430:CDS 30.0%
TATGGGGAAAAATAAAAGAG+AGG - chr4_2:67924820-67924839 None:intergenic 30.0%
! TATACTAACTGTTTTGCACA+TGG - chr4_2:67924932-67924951 None:intergenic 30.0%
TGTGCAAAACAGTTAGTATA+AGG + chr4_2:67924932-67924951 Msa0617430:three_prime_UTR 30.0%
AGAAGAAGAACAAAGGGAAA+GGG - chr4_2:67916878-67916897 None:intergenic 35.0%
!!! CGGAATCAAACTGCATTTTT+TGG - chr4_2:67916906-67916925 None:intergenic 35.0%
! AGGGGTTTATTGGATTTTGA+GGG - chr4_2:67917048-67917067 None:intergenic 35.0%
! AAGGGGTTTATTGGATTTTG+AGG - chr4_2:67917049-67917068 None:intergenic 35.0%
TCTTGTTCGGGAATAATTTC+GGG - chr4_2:67917081-67917100 None:intergenic 35.0%
! GAGTAAGGGTTTACGAATTT+TGG - chr4_2:67917238-67917257 None:intergenic 35.0%
! GGAAGTTTCTAGATTGAGTA+AGG - chr4_2:67917253-67917272 None:intergenic 35.0%
! GTTTTTGCAGAATCAACAAC+CGG - chr4_2:67917285-67917304 None:intergenic 35.0%
ACACTAGCACCTATCAAATT+AGG - chr4_2:67917333-67917352 None:intergenic 35.0%
TAATTTGATAGGTGCTAGTG+TGG + chr4_2:67917332-67917351 Msa0617430:CDS 35.0%
AATAAAGGGTGGACGAAAAA+TGG + chr4_2:67917441-67917460 Msa0617430:CDS 35.0%
AATAGTAATGGCAGCAATAG+TGG + chr4_2:67917495-67917514 Msa0617430:CDS 35.0%
AAGCAACAGGAAAAGAAGAA+TGG + chr4_2:67917609-67917628 Msa0617430:CDS 35.0%
AACAGGAAAAGAAGAATGGT+TGG + chr4_2:67917613-67917632 Msa0617430:CDS 35.0%
ACAGGAAAAGAAGAATGGTT+GGG + chr4_2:67917614-67917633 Msa0617430:CDS 35.0%
GGAAAATGAATGCAAAGTGT+TGG + chr4_2:67917635-67917654 Msa0617430:CDS 35.0%
!! AAATGAATGCAAAGTGTTGG+AGG + chr4_2:67917638-67917657 Msa0617430:CDS 35.0%
TGAAGCTTCTGATGAGAATT+TGG + chr4_2:67917683-67917702 Msa0617430:CDS 35.0%
!!! TGGTTTTGATTCTTTTCGAG+AGG + chr4_2:67917728-67917747 Msa0617430:CDS 35.0%
!!! GGTTTTGATTCTTTTCGAGA+GGG + chr4_2:67917729-67917748 Msa0617430:CDS 35.0%
!!! GTTTTGATTCTTTTCGAGAG+GGG + chr4_2:67917730-67917749 Msa0617430:CDS 35.0%
TCAATCATCAAAGCTACCAA+AGG - chr4_2:67917885-67917904 None:intergenic 35.0%
GAATTTCTGTCTGTTATCTC+TGG + chr4_2:67918346-67918365 Msa0617430:CDS 35.0%
CATTGTATATCTGAATGGTG+AGG + chr4_2:67918406-67918425 Msa0617430:intron 35.0%
! CATAATGGCATCTAAAGTCA+TGG - chr4_2:67918644-67918663 None:intergenic 35.0%
ATTTGTGCAAGGAATATCCA+GGG - chr4_2:67918671-67918690 None:intergenic 35.0%
TCAGATAAGGATAGTTAGAG+GGG - chr4_2:67918796-67918815 None:intergenic 35.0%
CTCAGATAAGGATAGTTAGA+GGG - chr4_2:67918797-67918816 None:intergenic 35.0%
ACTCAGATAAGGATAGTTAG+AGG - chr4_2:67918798-67918817 None:intergenic 35.0%
! TATGAAGTCTTCACCTTTTG+CGG + chr4_2:67918864-67918883 Msa0617430:CDS 35.0%
!!! ATGCTTTTAACTTCCGCAAA+AGG - chr4_2:67918880-67918899 None:intergenic 35.0%
!! TGTGTTTCAGGTTTAGTATG+TGG + chr4_2:67919068-67919087 Msa0617430:intron 35.0%
TGATAACAACATCAAGGCAA+AGG + chr4_2:67919223-67919242 Msa0617430:CDS 35.0%
! TCATAGTGGTATTTCTGCAA+AGG + chr4_2:67919346-67919365 Msa0617430:CDS 35.0%
! AAAAATGGCAAGGTATCAGT+TGG - chr4_2:67919512-67919531 None:intergenic 35.0%
GGACTAGATAAAAGAGATGT+TGG + chr4_2:67919566-67919585 Msa0617430:CDS 35.0%
!! CTGCATTAATTTGCATGAAC+TGG + chr4_2:67919619-67919638 Msa0617430:intron 35.0%
!! AGTGATTCACCGATTCTAAT+TGG + chr4_2:67919675-67919694 Msa0617430:intron 35.0%
!! GTGATTCACCGATTCTAATT+GGG + chr4_2:67919676-67919695 Msa0617430:intron 35.0%
AACTAGAGCCCAATTAGAAT+CGG - chr4_2:67919687-67919706 None:intergenic 35.0%
! AGTCTAAAACATAAGGCACA+AGG - chr4_2:67919728-67919747 None:intergenic 35.0%
AATTGCAAAATGGGGGTAAA+TGG + chr4_2:67919828-67919847 Msa0617430:intron 35.0%
AAAATGGGGGTAAATGGTAT+TGG + chr4_2:67919834-67919853 Msa0617430:intron 35.0%
TTCGCACTACTTATTTGCTT+TGG + chr4_2:67919923-67919942 Msa0617430:intron 35.0%
CCTAAACACAGTTATGACAA+TGG - chr4_2:67919992-67920011 None:intergenic 35.0%
CCATTGTCATAACTGTGTTT+AGG + chr4_2:67919989-67920008 Msa0617430:intron 35.0%
AACTTCGTAGTCTAATGTAC+AGG + chr4_2:67920215-67920234 Msa0617430:CDS 35.0%
! TAACGAACATATTTTCCCAC+AGG - chr4_2:67920392-67920411 None:intergenic 35.0%
CAGGTTTGATATGAAAGAAG+AGG + chr4_2:67920432-67920451 Msa0617430:CDS 35.0%
ACTTTGATAAACCAGATGAG+TGG + chr4_2:67920499-67920518 Msa0617430:intron 35.0%
AGACTTTCATAACATCCTGT+TGG + chr4_2:67920538-67920557 Msa0617430:intron 35.0%
GACTTTCATAACATCCTGTT+GGG + chr4_2:67920539-67920558 Msa0617430:intron 35.0%
!! AATCTTTAAAGCTCCTGAGA+TGG - chr4_2:67920621-67920640 None:intergenic 35.0%
!!! TGGGTTTTAAGCACTAAACA+AGG - chr4_2:67920782-67920801 None:intergenic 35.0%
TCTCAAGTTAATCTGGACAT+GGG - chr4_2:67920801-67920820 None:intergenic 35.0%
CTTGAGACCAAATAAAGCTA+AGG + chr4_2:67920814-67920833 Msa0617430:intron 35.0%
!! AACTGCACCTTAGCTTTATT+TGG - chr4_2:67920824-67920843 None:intergenic 35.0%
ATGGACAACCATCTACTTAT+AGG + chr4_2:67920872-67920891 Msa0617430:intron 35.0%
TTTAATCTGTAGACCTAGTC+TGG - chr4_2:67920994-67921013 None:intergenic 35.0%
!! GTGTGTTCTGAGTTTTCATA+TGG + chr4_2:67921118-67921137 Msa0617430:CDS 35.0%
! AGCAATAGCAGAAACCTTTT+GGG - chr4_2:67921399-67921418 None:intergenic 35.0%
! CTATTGCTGTGATTCTGAAA+AGG + chr4_2:67921411-67921430 Msa0617430:CDS 35.0%
ACAATAACCATCCATTTCAG+GGG - chr4_2:67921486-67921505 None:intergenic 35.0%
CACAATAACCATCCATTTCA+GGG - chr4_2:67921487-67921506 None:intergenic 35.0%
ACACAATAACCATCCATTTC+AGG - chr4_2:67921488-67921507 None:intergenic 35.0%
TAATGTTGTCAACCTCAAGA+TGG + chr4_2:67921520-67921539 Msa0617430:intron 35.0%
!! GAAGAAAAAGTGCCATTAGA+CGG - chr4_2:67921587-67921606 None:intergenic 35.0%
AAATCAGTTGTATGCCCTAA+AGG + chr4_2:67921796-67921815 Msa0617430:CDS 35.0%
TCGACTAATCCAAACCTTTA+GGG - chr4_2:67921813-67921832 None:intergenic 35.0%
ATCGACTAATCCAAACCTTT+AGG - chr4_2:67921814-67921833 None:intergenic 35.0%
GAATCTGCTAAACTATCTTC+AGG - chr4_2:67922021-67922040 None:intergenic 35.0%
GATAGTAATTCAAACGACAG+GGG + chr4_2:67922157-67922176 Msa0617430:intron 35.0%
ATTTGATGCAGGGTAACAAA+GGG - chr4_2:67922186-67922205 None:intergenic 35.0%
CTAATCAGAGATTTGATGCA+GGG - chr4_2:67922196-67922215 None:intergenic 35.0%
ACACACAAACACTACATACT+TGG - chr4_2:67922451-67922470 None:intergenic 35.0%
ATTGAGTTAGAACCTTGCAA+AGG + chr4_2:67922479-67922498 Msa0617430:intron 35.0%
TTGAGTTAGAACCTTGCAAA+GGG + chr4_2:67922480-67922499 Msa0617430:intron 35.0%
ACAACCTCTTGTGTAAAACA+GGG - chr4_2:67922585-67922604 None:intergenic 35.0%
AACAACCTCTTGTGTAAAAC+AGG - chr4_2:67922586-67922605 None:intergenic 35.0%
AAAAAATATCTCGCACTGCA+AGG - chr4_2:67922689-67922708 None:intergenic 35.0%
TTCCAGAATCCTATAACAGT+AGG - chr4_2:67922892-67922911 None:intergenic 35.0%
TATCAGCAGATATTACACGA+TGG + chr4_2:67922934-67922953 Msa0617430:intron 35.0%
ATCGGAAGTTGAAAGTTGTA+AGG + chr4_2:67922959-67922978 Msa0617430:intron 35.0%
!! TTATATTTAGAGGAGTGCTG+TGG + chr4_2:67923003-67923022 Msa0617430:intron 35.0%
TTATATGGGATCCATTTCCA+AGG - chr4_2:67923095-67923114 None:intergenic 35.0%
GAAATGGATCCCATATAAAG+TGG + chr4_2:67923097-67923116 Msa0617430:intron 35.0%
TGGATCTCACCACTTTATAT+GGG - chr4_2:67923109-67923128 None:intergenic 35.0%
TCTGTATCAGGAACTATAAC+CGG + chr4_2:67923313-67923332 Msa0617430:intron 35.0%
AATGCAATGAATTATCCACC+CGG - chr4_2:67923335-67923354 None:intergenic 35.0%
TCTTGTGTAGGTACGAAAAA+TGG + chr4_2:67923384-67923403 Msa0617430:intron 35.0%
GCAAGAAAATTGATCAAAGC+AGG + chr4_2:67923542-67923561 Msa0617430:CDS 35.0%
TTAGGTGACAGAAACTAGTA+AGG - chr4_2:67923569-67923588 None:intergenic 35.0%
ACCTTGATGCATATCATGTT+TGG + chr4_2:67923873-67923892 Msa0617430:intron 35.0%
TCCAAACATGATATGCATCA+AGG - chr4_2:67923877-67923896 None:intergenic 35.0%
ATGCATATCATGTTTGGAAG+AGG + chr4_2:67923879-67923898 Msa0617430:intron 35.0%
! CTGAAAATTACCTGTTTCTC+TGG + chr4_2:67923907-67923926 Msa0617430:intron 35.0%
! GAAAATTACCTGTTTCTCTG+GGG + chr4_2:67923909-67923928 Msa0617430:intron 35.0%
AATTGCTCTGTAGAAAAACC+TGG - chr4_2:67923939-67923958 None:intergenic 35.0%
ATATTGTATAAGGGTAGGCT+GGG - chr4_2:67924017-67924036 None:intergenic 35.0%
AGCCTACCCTTATACAATAT+GGG + chr4_2:67924017-67924036 Msa0617430:CDS 35.0%
!! GTTTTTCAACGTACCAGAAA+TGG - chr4_2:67924050-67924069 None:intergenic 35.0%
CCAACAAGTATTTAAGGACA+TGG - chr4_2:67924081-67924100 None:intergenic 35.0%
CCATGTCCTTAAATACTTGT+TGG + chr4_2:67924078-67924097 Msa0617430:intron 35.0%
! TTGATTTGAGAAACAAAGGG+AGG + chr4_2:67924208-67924227 Msa0617430:intron 35.0%
! TACCAAGATAGACTTTAAGG+TGG + chr4_2:67924389-67924408 Msa0617430:CDS 35.0%
ACAGATGTCTTTACTGGTAA+GGG - chr4_2:67924510-67924529 None:intergenic 35.0%
!! AGGGATTAGTTTCTACAACA+AGG - chr4_2:67924754-67924773 None:intergenic 35.0%
GAGAAGAAGAACAAAGGGAA+AGG - chr4_2:67916879-67916898 None:intergenic 40.0%
GATCGGAGAAGAAGAACAAA+GGG - chr4_2:67916884-67916903 None:intergenic 40.0%
TGAAGAAATGTGAGATCCGT+CGG - chr4_2:67916938-67916957 None:intergenic 40.0%
! TTGTTTGAAACTGGAAGAGG+TGG - chr4_2:67917003-67917022 None:intergenic 40.0%
!! GGATTTTGAGGGTTTGGTTT+TGG - chr4_2:67917037-67917056 None:intergenic 40.0%
TTGTTCGGGAATAATTTCGG+GGG - chr4_2:67917079-67917098 None:intergenic 40.0%
CTTGTTCGGGAATAATTTCG+GGG - chr4_2:67917080-67917099 None:intergenic 40.0%
AAGGGGAAAGATTCTTGTTC+GGG - chr4_2:67917093-67917112 None:intergenic 40.0%
GAAGGGGAAAGATTCTTGTT+CGG - chr4_2:67917094-67917113 None:intergenic 40.0%
GAGTGAGAAGATGAAGTTGA+AGG - chr4_2:67917168-67917187 None:intergenic 40.0%
! CCTTTTAGTGCCTTGACTAT+CGG - chr4_2:67917363-67917382 None:intergenic 40.0%
TGTTGAGAATGCAAAGCAAC+AGG + chr4_2:67917596-67917615 Msa0617430:CDS 40.0%
CGATTAAGAATGTGCTTGCT+GGG + chr4_2:67917763-67917782 Msa0617430:CDS 40.0%
!! TACGCTTGTTGTTAGTCCTT+TGG + chr4_2:67917866-67917885 Msa0617430:CDS 40.0%
!!! CAGTGCTCAGGTTGATTTTA+AGG + chr4_2:67917950-67917969 Msa0617430:intron 40.0%
AACTGAATTCAGCTTTGCCT+TGG + chr4_2:67918115-67918134 Msa0617430:intron 40.0%
TCTTCATTCAAGAATCGCTC+TGG - chr4_2:67918328-67918347 None:intergenic 40.0%
TTTCTGTCTGTTATCTCTGG+TGG + chr4_2:67918349-67918368 Msa0617430:CDS 40.0%
TTCTGTCTGTTATCTCTGGT+GGG + chr4_2:67918350-67918369 Msa0617430:CDS 40.0%
TGAGTCTCATGAATGAAGGT+CGG - chr4_2:67918555-67918574 None:intergenic 40.0%
AATATCCAGGGCAGACATAA+TGG - chr4_2:67918659-67918678 None:intergenic 40.0%
GATTTGTGCAAGGAATATCC+AGG - chr4_2:67918672-67918691 None:intergenic 40.0%
AAGACTTCATAAGCACCAGT+AGG - chr4_2:67918855-67918874 None:intergenic 40.0%
! GCAAATTTCAGGTGCGTATA+TGG + chr4_2:67918911-67918930 Msa0617430:intron 40.0%
AGTGATGTTGTATTCTGCAG+TGG + chr4_2:67919109-67919128 Msa0617430:intron 40.0%
TGGTTCAAACAAGATCAGAG+TGG + chr4_2:67919394-67919413 Msa0617430:CDS 40.0%
TGCGTCTAATACAACATTGC+TGG + chr4_2:67919454-67919473 Msa0617430:intron 40.0%
GCGTCTAATACAACATTGCT+GGG + chr4_2:67919455-67919474 Msa0617430:intron 40.0%
TATGAAGGTTGTTGCAACTG+TGG + chr4_2:67919532-67919551 Msa0617430:intron 40.0%
AAAGAGATGTTGGAGCAGTA+AGG + chr4_2:67919576-67919595 Msa0617430:intron 40.0%
ACATAAGGCACAAGGAAAAG+TGG - chr4_2:67919720-67919739 None:intergenic 40.0%
GGAGAATTGAGCTCTTTACT+TGG + chr4_2:67919855-67919874 Msa0617430:intron 40.0%
TTACAGTTTACCTGGAAGTC+TGG + chr4_2:67920019-67920038 Msa0617430:CDS 40.0%
! AAGTCTGGAAGAGTATGTAC+AGG + chr4_2:67920034-67920053 Msa0617430:CDS 40.0%
! CAATTTTTCATCCGCAGTGA+AGG + chr4_2:67920307-67920326 Msa0617430:intron 40.0%
!! ATTCATCGATTCCTTCACTG+CGG - chr4_2:67920321-67920340 None:intergenic 40.0%
GTAACTGAAAACCACTCATC+TGG - chr4_2:67920513-67920532 None:intergenic 40.0%
TCACCATCAATGTATCAGCA+TGG - chr4_2:67920571-67920590 None:intergenic 40.0%
!! TGCTGATACATTGATGGTGA+AGG + chr4_2:67920571-67920590 Msa0617430:intron 40.0%
!! GCTGATACATTGATGGTGAA+GGG + chr4_2:67920572-67920591 Msa0617430:intron 40.0%
!! CTGATACATTGATGGTGAAG+GGG + chr4_2:67920573-67920592 Msa0617430:intron 40.0%
!! TGATACATTGATGGTGAAGG+GGG + chr4_2:67920574-67920593 Msa0617430:intron 40.0%
GTCTCAAGTTAATCTGGACA+TGG - chr4_2:67920802-67920821 None:intergenic 40.0%
AAAGCTAAGGTGCAGTTTCT+AGG + chr4_2:67920827-67920846 Msa0617430:intron 40.0%
CTGTGAGAATCACCTAGTAA+AGG - chr4_2:67921034-67921053 None:intergenic 40.0%
! CAGCAATAGCAGAAACCTTT+TGG - chr4_2:67921400-67921419 None:intergenic 40.0%
! CAAACCATTTTCCCCTGAAA+TGG + chr4_2:67921472-67921491 Msa0617430:intron 40.0%
TTGGATCAGATTCCATCTTG+AGG - chr4_2:67921535-67921554 None:intergenic 40.0%
GATCTGAAAACACGTAACGA+TGG - chr4_2:67921698-67921717 None:intergenic 40.0%
AGTTGTATGCCCTAAAGGTT+TGG + chr4_2:67921801-67921820 Msa0617430:intron 40.0%
!! GGTTTGGATTAGTCGATAAC+TGG + chr4_2:67921817-67921836 Msa0617430:intron 40.0%
! ATCCAGCTTGTTTAAGCACA+TGG + chr4_2:67921980-67921999 Msa0617430:intron 40.0%
AACCATGTGCTTAAACAAGC+TGG - chr4_2:67921985-67922004 None:intergenic 40.0%
GATTTGATGCAGGGTAACAA+AGG - chr4_2:67922187-67922206 None:intergenic 40.0%
GCTAATCAGAGATTTGATGC+AGG - chr4_2:67922197-67922216 None:intergenic 40.0%
AGCCATAAATACTTGCAGCA+TGG + chr4_2:67922300-67922319 Msa0617430:intron 40.0%
AGCCATGCTGCAAGTATTTA+TGG - chr4_2:67922305-67922324 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG - chr4_2:67922554-67922573 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG - chr4_2:67922580-67922599 None:intergenic 40.0%
! CTTACCCTGTTTTACACAAG+AGG + chr4_2:67922578-67922597 Msa0617430:intron 40.0%
! TTACACAAGAGGTTGTTTCC+AGG + chr4_2:67922589-67922608 Msa0617430:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG - chr4_2:67922629-67922648 None:intergenic 40.0%
! ACTGCAAGGTTCTAACATGA+GGG - chr4_2:67922675-67922694 None:intergenic 40.0%
GTTTCCGATACCATACACAA+GGG - chr4_2:67922774-67922793 None:intergenic 40.0%
TGTTTCCGATACCATACACA+AGG - chr4_2:67922775-67922794 None:intergenic 40.0%
GTGGATCTCACCACTTTATA+TGG - chr4_2:67923110-67923129 None:intergenic 40.0%
ATAAAGTGGTGAGATCCACA+TGG + chr4_2:67923111-67923130 Msa0617430:intron 40.0%
TAAAGTGGTGAGATCCACAT+GGG + chr4_2:67923112-67923131 Msa0617430:intron 40.0%
TTTATTGGGTGAAACCCATG+TGG - chr4_2:67923129-67923148 None:intergenic 40.0%
ACATGGGTTTCACCCAATAA+AGG + chr4_2:67923128-67923147 Msa0617430:intron 40.0%
GTTTCACCCAATAAAGGAGT+GGG + chr4_2:67923134-67923153 Msa0617430:intron 40.0%
CTAACACCCACTCCTTTATT+GGG - chr4_2:67923143-67923162 None:intergenic 40.0%
TCTAACACCCACTCCTTTAT+TGG - chr4_2:67923144-67923163 None:intergenic 40.0%
ATAAGTCCTGACTCTGTATC+AGG + chr4_2:67923301-67923320 Msa0617430:intron 40.0%
ATAGTTCCTGATACAGAGTC+AGG - chr4_2:67923310-67923329 None:intergenic 40.0%
CTGTATCAGGAACTATAACC+GGG + chr4_2:67923314-67923333 Msa0617430:intron 40.0%
TTTCGTACCTACACAAGAAG+CGG - chr4_2:67923382-67923401 None:intergenic 40.0%
ATCACACTTCATGCTTGCAA+AGG + chr4_2:67923476-67923495 Msa0617430:CDS 40.0%
ATAAAGGTGAGTCGTTACAC+AGG + chr4_2:67923830-67923849 Msa0617430:intron 40.0%
CATATTGTATAAGGGTAGGC+TGG - chr4_2:67924018-67924037 None:intergenic 40.0%
CAGCCTACCCTTATACAATA+TGG + chr4_2:67924016-67924035 Msa0617430:CDS 40.0%
GCCTACCCTTATACAATATG+GGG + chr4_2:67924018-67924037 Msa0617430:CDS 40.0%
ACCCCATATTGTATAAGGGT+AGG - chr4_2:67924022-67924041 None:intergenic 40.0%
TATGGGGTAAAACCCATTTC+TGG + chr4_2:67924034-67924053 Msa0617430:CDS 40.0%
CACCACCTTAAAGTCTATCT+TGG - chr4_2:67924394-67924413 None:intergenic 40.0%
!! GATAGACTTTAAGGTGGTGA+TGG + chr4_2:67924395-67924414 Msa0617430:CDS 40.0%
CACAGATGTCTTTACTGGTA+AGG - chr4_2:67924511-67924530 None:intergenic 40.0%
CAATGCACAGATGTCTTTAC+TGG - chr4_2:67924516-67924535 None:intergenic 40.0%
!! GACATCTGTGCATTGATTGA+AGG + chr4_2:67924521-67924540 Msa0617430:three_prime_UTR 40.0%
!! ATCTGTGCATTGATTGAAGG+TGG + chr4_2:67924524-67924543 Msa0617430:three_prime_UTR 40.0%
!! TCTGTGCATTGATTGAAGGT+GGG + chr4_2:67924525-67924544 Msa0617430:three_prime_UTR 40.0%
! TACTTTTGCTTGTCTTGACC+TGG - chr4_2:67924640-67924659 None:intergenic 40.0%
CTAGGTCGCACATATAATGA+GGG - chr4_2:67924677-67924696 None:intergenic 40.0%
TCTAGGTCGCACATATAATG+AGG - chr4_2:67924678-67924697 None:intergenic 40.0%
CATTATATGTGCGACCTAGA+TGG + chr4_2:67924678-67924697 Msa0617430:three_prime_UTR 40.0%
ATCCTTGATTCCTTCCATCT+AGG - chr4_2:67924695-67924714 None:intergenic 40.0%
GTTGTAGAAACTAATCCCTC+AGG + chr4_2:67924755-67924774 Msa0617430:three_prime_UTR 40.0%
AACTAATCCCTCAGGTCAAA+AGG + chr4_2:67924763-67924782 Msa0617430:three_prime_UTR 40.0%
! ACCTTTTCCTTTTGACCTGA+GGG - chr4_2:67924773-67924792 None:intergenic 40.0%
! AACCTTTTCCTTTTGACCTG+AGG - chr4_2:67924774-67924793 None:intergenic 40.0%
AGAAGAACAAAGGGAAAGGG+TGG - chr4_2:67916875-67916894 None:intergenic 45.0%
GGATCGGAGAAGAAGAACAA+AGG - chr4_2:67916885-67916904 None:intergenic 45.0%
GAACTTGGTTGTTGTCTTGG+CGG - chr4_2:67916964-67916983 None:intergenic 45.0%
GGTGAACTTGGTTGTTGTCT+TGG - chr4_2:67916967-67916986 None:intergenic 45.0%
! GAAACTGGAAGAGGTGGTTT+TGG - chr4_2:67916997-67917016 None:intergenic 45.0%
GGGTTTAGGAAGGGGTTTAT+TGG - chr4_2:67917058-67917077 None:intergenic 45.0%
AATTTCGGGGGGTTTAGGAA+GGG - chr4_2:67917067-67917086 None:intergenic 45.0%
TAATTTCGGGGGGTTTAGGA+AGG - chr4_2:67917068-67917087 None:intergenic 45.0%
GGAATAATTTCGGGGGGTTT+AGG - chr4_2:67917072-67917091 None:intergenic 45.0%
TGTTCGGGAATAATTTCGGG+GGG - chr4_2:67917078-67917097 None:intergenic 45.0%
GGATGTTGAAAGGAAGTGAG+GGG - chr4_2:67917125-67917144 None:intergenic 45.0%
CGGATGTTGAAAGGAAGTGA+GGG - chr4_2:67917126-67917145 None:intergenic 45.0%
TCGGATGTTGAAAGGAAGTG+AGG - chr4_2:67917127-67917146 None:intergenic 45.0%
GTTCGTTGTCGGATGTTGAA+AGG - chr4_2:67917135-67917154 None:intergenic 45.0%
ATTTGGAGAAGAATCCGGCA+GGG - chr4_2:67917203-67917222 None:intergenic 45.0%
TGCAGAATCAACAACCGGTT+CGG - chr4_2:67917280-67917299 None:intergenic 45.0%
! CCGATAGTCAAGGCACTAAA+AGG + chr4_2:67917360-67917379 Msa0617430:CDS 45.0%
! AGAAGGCGATGATGATGATG+AGG + chr4_2:67917557-67917576 Msa0617430:CDS 45.0%
!! TGAATGCAAAGTGTTGGAGG+AGG + chr4_2:67917641-67917660 Msa0617430:CDS 45.0%
GCGATTAAGAATGTGCTTGC+TGG + chr4_2:67917762-67917781 Msa0617430:CDS 45.0%
!!! GACGATGCTTATTTTGCCGA+CGG + chr4_2:67917791-67917810 Msa0617430:CDS 45.0%
!!! ACGATGCTTATTTTGCCGAC+GGG + chr4_2:67917792-67917811 Msa0617430:CDS 45.0%
!!! TTGAGTGCGTTGATTTTGCC+TGG + chr4_2:67917840-67917859 Msa0617430:CDS 45.0%
!!! TGAGTGCGTTGATTTTGCCT+GGG + chr4_2:67917841-67917860 Msa0617430:CDS 45.0%
CTAACAACAAGCGTAATCCC+AGG - chr4_2:67917861-67917880 None:intergenic 45.0%
ACAATTGCCTCCGCTCATTT+CGG + chr4_2:67917914-67917933 Msa0617430:CDS 45.0%
AAGCTGGTTGAGTGTTTCAG+AGG - chr4_2:67918063-67918082 None:intergenic 45.0%
TTATTGTGCCTTGACGAAGC+TGG - chr4_2:67918079-67918098 None:intergenic 45.0%
GCTTCGTCAAGGCACAATAA+AGG + chr4_2:67918079-67918098 Msa0617430:CDS 45.0%
! GCTCTGAGTCTCATGAATGA+AGG - chr4_2:67918559-67918578 None:intergenic 45.0%
! GGTATTTCTGCAAAGGAACG+TGG + chr4_2:67919353-67919372 Msa0617430:CDS 45.0%
GTTGTTGCAACTGTGGCATT+TGG + chr4_2:67919539-67919558 Msa0617430:CDS 45.0%
! CTAATTGGGCTCTAGTTGCA+TGG + chr4_2:67919690-67919709 Msa0617430:intron 45.0%
ACATACTCTTCCAGACTTCC+AGG - chr4_2:67920032-67920051 None:intergenic 45.0%
! GAATGGGCATTGTAGGAGAT+AGG + chr4_2:67920127-67920146 Msa0617430:intron 45.0%
ATATCAAACCTGCGTGAAGC+AGG - chr4_2:67920424-67920443 None:intergenic 45.0%
CATAACATCCTGTTGGGAGT+TGG + chr4_2:67920545-67920564 Msa0617430:intron 45.0%
TGGCCATGCTGATACATTGA+TGG + chr4_2:67920565-67920584 Msa0617430:intron 45.0%
GACTGGTGCCTATAAGTAGA+TGG - chr4_2:67920883-67920902 None:intergenic 45.0%
! CGTGTTACCTTTTCCAGACT+AGG + chr4_2:67920978-67920997 Msa0617430:intron 45.0%
CTGTAGACCTAGTCTGGAAA+AGG - chr4_2:67920988-67921007 None:intergenic 45.0%
!! TCTCACAGTTTTGACACGCT+TGG + chr4_2:67921046-67921065 Msa0617430:CDS 45.0%
ACACACGTTGCATTTGTCTG+TGG - chr4_2:67921104-67921123 None:intergenic 45.0%
TTTGGCACTAATGCAGACTC+CGG + chr4_2:67921361-67921380 Msa0617430:intron 45.0%
! AGCAGAAACCTTTTGGGCAA+GGG - chr4_2:67921393-67921412 None:intergenic 45.0%
! TAGCAGAAACCTTTTGGGCA+AGG - chr4_2:67921394-67921413 None:intergenic 45.0%
CCATCCATTTCAGGGGAAAA+TGG - chr4_2:67921479-67921498 None:intergenic 45.0%
! CCATTTTCCCCTGAAATGGA+TGG + chr4_2:67921476-67921495 Msa0617430:intron 45.0%
TCCAACTGTGGCAAATGACA+TGG + chr4_2:67921751-67921770 Msa0617430:CDS 45.0%
CCAACTGTGGCAAATGACAT+GGG + chr4_2:67921752-67921771 Msa0617430:CDS 45.0%
CAACTGTGGCAAATGACATG+GGG + chr4_2:67921753-67921772 Msa0617430:CDS 45.0%
AACTGTGGCAAATGACATGG+GGG + chr4_2:67921754-67921773 Msa0617430:CDS 45.0%
GCGTACAATACACCAAATGG+TGG - chr4_2:67922555-67922574 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr4_2:67922558-67922577 None:intergenic 45.0%
TCATGTGACTGAAAGGTCAC+GGG - chr4_2:67922622-67922641 None:intergenic 45.0%
GTCATGTGACTGAAAGGTCA+CGG - chr4_2:67922623-67922642 None:intergenic 45.0%
TCTAACATGAGGGGTAACCT+TGG - chr4_2:67922665-67922684 None:intergenic 45.0%
! CTGCAAGGTTCTAACATGAG+GGG - chr4_2:67922674-67922693 None:intergenic 45.0%
! CACTGCAAGGTTCTAACATG+AGG - chr4_2:67922676-67922695 None:intergenic 45.0%
!! ACTTTCTAGTTTGGGACACC+TGG + chr4_2:67922730-67922749 Msa0617430:intron 45.0%
TCTGCCCTTGTGTATGGTAT+CGG + chr4_2:67922767-67922786 Msa0617430:intron 45.0%
AGGACATGGCCTACTGTTAT+AGG + chr4_2:67922880-67922899 Msa0617430:intron 45.0%
GGCCTACTGTTATAGGATTC+TGG + chr4_2:67922887-67922906 Msa0617430:intron 45.0%
GGTTTCACCCAATAAAGGAG+TGG + chr4_2:67923133-67923152 Msa0617430:intron 45.0%
TATCAGGAACTATAACCGGG+TGG + chr4_2:67923317-67923336 Msa0617430:intron 45.0%
TTCGTACCTACACAAGAAGC+GGG - chr4_2:67923381-67923400 None:intergenic 45.0%
TTTCCTGCGGGCAGATATAA+AGG + chr4_2:67923814-67923833 Msa0617430:CDS 45.0%
! AAATTGTGGATTGCAGGGGA+AGG + chr4_2:67924364-67924383 Msa0617430:intron 45.0%
!! TAAGGGACTCGGTGCAAATT+TGG - chr4_2:67924493-67924512 None:intergenic 45.0%
GTCTTTACTGGTAAGGGACT+CGG - chr4_2:67924504-67924523 None:intergenic 45.0%
!! CTGTGCATTGATTGAAGGTG+GGG + chr4_2:67924526-67924545 Msa0617430:three_prime_UTR 45.0%
ATATGTGCGACCTAGATGGA+AGG + chr4_2:67924682-67924701 Msa0617430:three_prime_UTR 45.0%
GACCTAGATGGAAGGAATCA+AGG + chr4_2:67924690-67924709 Msa0617430:three_prime_UTR 45.0%
TCCCTCAGGTCAAAAGGAAA+AGG + chr4_2:67924769-67924788 Msa0617430:three_prime_UTR 45.0%
GATTCCGATTCAGACTCCGA+CGG + chr4_2:67916919-67916938 Msa0617430:CDS 50.0%
AGATCCGTCGGAGTCTGAAT+CGG - chr4_2:67916926-67916945 None:intergenic 50.0%
! TTTGGCGGTGATGGTGAACT+TGG - chr4_2:67916979-67916998 None:intergenic 50.0%
!!! ACTGGAAGAGGTGGTTTTGG+CGG - chr4_2:67916994-67917013 None:intergenic 50.0%
ATTTCGGGGGGTTTAGGAAG+GGG - chr4_2:67917066-67917085 None:intergenic 50.0%
AAGGAAGTGAGGGGATGGAA+GGG - chr4_2:67917116-67917135 None:intergenic 50.0%
AAAGGAAGTGAGGGGATGGA+AGG - chr4_2:67917117-67917136 None:intergenic 50.0%
GTTGAAAGGAAGTGAGGGGA+TGG - chr4_2:67917121-67917140 None:intergenic 50.0%
GATTTGGAGAAGAATCCGGC+AGG - chr4_2:67917204-67917223 None:intergenic 50.0%
AGAAACTTCCGAAGCCGAAC+CGG + chr4_2:67917263-67917282 Msa0617430:CDS 50.0%
!! ATCAACAACCGGTTCGGCTT+CGG - chr4_2:67917274-67917293 None:intergenic 50.0%
! TGTGGTAACGCCGATAGTCA+AGG + chr4_2:67917350-67917369 Msa0617430:CDS 50.0%
! AGGCGATGATGATGATGAGG+AGG + chr4_2:67917560-67917579 Msa0617430:CDS 50.0%
! CGATGATGATGATGAGGAGG+AGG + chr4_2:67917563-67917582 Msa0617430:CDS 50.0%
! GATGATGATGAGGAGGAGGA+TGG + chr4_2:67917567-67917586 Msa0617430:CDS 50.0%
TGATGAGGAGGAGGATGGTA+TGG + chr4_2:67917572-67917591 Msa0617430:CDS 50.0%
GATGAGGAGGAGGATGGTAT+GGG + chr4_2:67917573-67917592 Msa0617430:CDS 50.0%
!! TTATTTTGCCGACGGGTGCT+GGG + chr4_2:67917799-67917818 Msa0617430:CDS 50.0%
CAATTGCCTCCGCTCATTTC+GGG + chr4_2:67917915-67917934 Msa0617430:CDS 50.0%
ACACTCAACCAGCTTCGTCA+AGG + chr4_2:67918068-67918087 Msa0617430:CDS 50.0%
AGATGCCATTATGTCTGCCC+TGG + chr4_2:67918651-67918670 Msa0617430:CDS 50.0%
AAAGGAACGTGGCTACGTAC+AGG + chr4_2:67919364-67919383 Msa0617430:CDS 50.0%
GGCTACGTACAGGAGTTGTT+TGG + chr4_2:67919374-67919393 Msa0617430:CDS 50.0%
TGCAACTGTGGCATTTGGCA+TGG + chr4_2:67919544-67919563 Msa0617430:CDS 50.0%
GCAACTGTGGCATTTGGCAT+GGG + chr4_2:67919545-67919564 Msa0617430:CDS 50.0%
TTGTAGGAGATAGGACGTGC+CGG + chr4_2:67920136-67920155 Msa0617430:intron 50.0%
CTGCTGACAAAAGCTCCTGT+GGG + chr4_2:67920374-67920393 Msa0617430:CDS 50.0%
TCAAAGAACCTGCTTCACGC+AGG + chr4_2:67920413-67920432 Msa0617430:CDS 50.0%
!! AGTTTTGACACGCTTGGAGC+TGG + chr4_2:67921052-67921071 Msa0617430:CDS 50.0%
!! GTTTTGACACGCTTGGAGCT+GGG + chr4_2:67921053-67921072 Msa0617430:CDS 50.0%
AGGGAACGCATACCGTCTAA+TGG + chr4_2:67921572-67921591 Msa0617430:intron 50.0%
! CCCATGTCATTTGCCACAGT+TGG - chr4_2:67921755-67921774 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG + chr4_2:67922645-67922664 Msa0617430:intron 50.0%
! TTTGGGACACCTGGCCAATT+TGG + chr4_2:67922739-67922758 Msa0617430:intron 50.0%
AAGGGCAGAGTAGGCCAAAT+TGG - chr4_2:67922756-67922775 None:intergenic 50.0%
ACCATACACAAGGGCAGAGT+AGG - chr4_2:67922765-67922784 None:intergenic 50.0%
TGAGTCCCACACCTTGGAAA+TGG + chr4_2:67923081-67923100 Msa0617430:intron 50.0%
GGGATCCATTTCCAAGGTGT+GGG - chr4_2:67923089-67923108 None:intergenic 50.0%
TGGGATCCATTTCCAAGGTG+TGG - chr4_2:67923090-67923109 None:intergenic 50.0%
ACATACGCAGTCGTTTCCTG+CGG + chr4_2:67923801-67923820 Msa0617430:intron 50.0%
TCACCTTTATATCTGCCCGC+AGG - chr4_2:67923820-67923839 None:intergenic 50.0%
CTGGTAATCCCCAGAGAAAC+AGG - chr4_2:67923920-67923939 None:intergenic 50.0%
! CTGTTTCTCTGGGGATTACC+AGG + chr4_2:67923918-67923937 Msa0617430:intron 50.0%
TTACACCAAGAGCTGTTGCG+AGG + chr4_2:67923971-67923990 Msa0617430:CDS 50.0%
TACACCAAGAGCTGTTGCGA+GGG + chr4_2:67923972-67923991 Msa0617430:CDS 50.0%
ATTACCCTCGCAACAGCTCT+TGG - chr4_2:67923979-67923998 None:intergenic 50.0%
! CTCGGTGCAAATTTGGCAGA+TGG - chr4_2:67924486-67924505 None:intergenic 50.0%
!! TGCATTGATTGAAGGTGGGG+CGG + chr4_2:67924529-67924548 Msa0617430:three_prime_UTR 50.0%
CTTGACCTGGAGTAACAGAC+AGG - chr4_2:67924627-67924646 None:intergenic 50.0%
!!! AGAGGTGGTTTTGGCGGTGA+TGG - chr4_2:67916988-67917007 None:intergenic 55.0%
AGTGAGGGGATGGAAGGGAA+GGG - chr4_2:67917111-67917130 None:intergenic 55.0%
AAGTGAGGGGATGGAAGGGA+AGG - chr4_2:67917112-67917131 None:intergenic 55.0%
GAGCGTCAGACGTTCGTTGT+CGG - chr4_2:67917146-67917165 None:intergenic 55.0%
TCTATCGAAACCCTCCCTGC+CGG + chr4_2:67917186-67917205 Msa0617430:CDS 55.0%
! GTCAAGGCACTAAAAGGCGC+CGG + chr4_2:67917366-67917385 Msa0617430:CDS 55.0%
!! TTTTCGAGAGGGGCAGCTTG+AGG + chr4_2:67917740-67917759 Msa0617430:CDS 55.0%
!!! CTTATTTTGCCGACGGGTGC+TGG + chr4_2:67917798-67917817 Msa0617430:CDS 55.0%
!! AGAAGAGCGCCCGAAATGAG+CGG - chr4_2:67917927-67917946 None:intergenic 55.0%
CGCTCTTCTAAGCAGTGCTC+AGG + chr4_2:67917938-67917957 Msa0617430:CDS 55.0%
! CCACAGGAGCTTTTGTCAGC+AGG - chr4_2:67920376-67920395 None:intergenic 55.0%
CCTGCTGACAAAAGCTCCTG+TGG + chr4_2:67920373-67920392 Msa0617430:CDS 55.0%
! TTTTGGGCAAGGGACACAGC+CGG - chr4_2:67921383-67921402 None:intergenic 55.0%
GAACCTTGCAAAGGGCAACC+CGG + chr4_2:67922488-67922507 Msa0617430:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr4_2:67922610-67922629 None:intergenic 55.0%
CAGAGTAGGCCAAATTGGCC+AGG - chr4_2:67922751-67922770 None:intergenic 55.0%
GCCTACTCTGCCCTTGTGTA+TGG + chr4_2:67922761-67922780 Msa0617430:intron 55.0%
CCAAGGTGTGGGACTCACAT+AGG - chr4_2:67923078-67923097 None:intergenic 55.0%
CCTATGTGAGTCCCACACCT+TGG + chr4_2:67923075-67923094 Msa0617430:intron 55.0%
CATGGTCCCGCTTCTTGTGT+AGG + chr4_2:67923372-67923391 Msa0617430:intron 55.0%
CATACGCAGTCGTTTCCTGC+GGG + chr4_2:67923802-67923821 Msa0617430:intron 55.0%
GCTGTTGCGAGGGTAATGCA+CGG + chr4_2:67923982-67924001 Msa0617430:CDS 55.0%
!! GGTGGTGATGGAAGCAGCTA+AGG + chr4_2:67924407-67924426 Msa0617430:CDS 55.0%
!! GCATTGATTGAAGGTGGGGC+GGG + chr4_2:67924530-67924549 Msa0617430:three_prime_UTR 55.0%
! CATTGATTGAAGGTGGGGCG+GGG + chr4_2:67924531-67924550 Msa0617430:three_prime_UTR 55.0%
ATTGATTGAAGGTGGGGCGG+GGG + chr4_2:67924532-67924551 Msa0617430:three_prime_UTR 55.0%
ACATGGCGCGAAACAACTGC+AGG - chr4_2:67924575-67924594 None:intergenic 55.0%
CTGGAGTAACAGACAGGCAG+CGG - chr4_2:67924621-67924640 None:intergenic 55.0%
GTGAGGGGATGGAAGGGAAG+GGG - chr4_2:67917110-67917129 None:intergenic 60.0%
GGAGAAGAATCCGGCAGGGA+GGG - chr4_2:67917199-67917218 None:intergenic 60.0%
TGGAGAAGAATCCGGCAGGG+AGG - chr4_2:67917200-67917219 None:intergenic 60.0%
!! GCACTAAAAGGCGCCGGAGA+AGG + chr4_2:67917372-67917391 Msa0617430:CDS 60.0%
AGGAGATAGGACGTGCCGGA+AGG + chr4_2:67920140-67920159 Msa0617430:intron 60.0%
GGAGATAGGACGTGCCGGAA+GGG + chr4_2:67920141-67920160 Msa0617430:intron 60.0%
ATAGGACGTGCCGGAAGGGA+CGG + chr4_2:67920145-67920164 Msa0617430:CDS 60.0%
CAGCATGGCCAACTCCCAAC+AGG - chr4_2:67920556-67920575 None:intergenic 60.0%
GGCTGTGTCCCTTGCCCAAA+AGG + chr4_2:67921382-67921401 Msa0617430:CDS 60.0%
ACTAGAGCCCCCGCATATGC+AGG + chr4_2:67922514-67922533 Msa0617430:intron 60.0%
CTAGAGCCCCCGCATATGCA+GGG + chr4_2:67922515-67922534 Msa0617430:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr4_2:67922526-67922545 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr4_2:67922527-67922546 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr4_2:67922526-67922545 Msa0617430:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr4_2:67922527-67922546 Msa0617430:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr4_2:67922542-67922561 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - chr4_2:67922656-67922675 None:intergenic 60.0%
GAGTAACAGACAGGCAGCGG+CGG - chr4_2:67924618-67924637 None:intergenic 60.0%
CGCTGCCTGTCTGTTACTCC+AGG + chr4_2:67924619-67924638 Msa0617430:three_prime_UTR 60.0%
AGCGACTTCCCAGCACCCGT+CGG - chr4_2:67917810-67917829 None:intergenic 65.0%
! AGAGCGCCCGAAATGAGCGG+AGG - chr4_2:67917924-67917943 None:intergenic 65.0%
TAGGACGTGCCGGAAGGGAC+GGG + chr4_2:67920146-67920165 Msa0617430:CDS 65.0%
GGACAACCTCCCGTCCCTTC+CGG - chr4_2:67920158-67920177 None:intergenic 65.0%
GCACCGGGTTGCCCTTTGCA+AGG - chr4_2:67922494-67922513 None:intergenic 65.0%
! ATGCGGGGGCTCTAGTGCAC+CGG - chr4_2:67922510-67922529 None:intergenic 65.0%
TCCCGGACCCTGCATATGCG+GGG - chr4_2:67922525-67922544 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr4_2:67922525-67922544 Msa0617430:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr4_2:67922540-67922559 Msa0617430:intron 65.0%
! TGCGGGGGCTCTAGTGCACC+GGG - chr4_2:67922509-67922528 None:intergenic 70.0%
GCCCCCGCATATGCAGGGTC+CGG + chr4_2:67922520-67922539 Msa0617430:intron 70.0%
CCCGGACCCTGCATATGCGG+GGG - chr4_2:67922524-67922543 None:intergenic 70.0%
CCCCCGCATATGCAGGGTCC+GGG + chr4_2:67922521-67922540 Msa0617430:intron 70.0%
GACGTGCCGGAAGGGACGGG+AGG + chr4_2:67920149-67920168 Msa0617430:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 67916867 67925048 67916867 ID=Msa0617430;Name=Msa0617430
chr4_2 mRNA 67916867 67925048 67916867 ID=Msa0617430-mRNA-1;Parent=Msa0617430;Name=Msa0617430-mRNA-1;_AED=0.12;_eAED=0.12;_QI=43|0.88|0.94|1|1|1|18|581|866
chr4_2 exon 67916867 67917959 67916867 ID=Msa0617430-mRNA-1:exon:19468;Parent=Msa0617430-mRNA-1
chr4_2 exon 67918047 67918100 67918047 ID=Msa0617430-mRNA-1:exon:19469;Parent=Msa0617430-mRNA-1
chr4_2 exon 67918310 67918422 67918310 ID=Msa0617430-mRNA-1:exon:19470;Parent=Msa0617430-mRNA-1
chr4_2 exon 67918540 67918734 67918540 ID=Msa0617430-mRNA-1:exon:19471;Parent=Msa0617430-mRNA-1
chr4_2 exon 67918843 67918921 67918843 ID=Msa0617430-mRNA-1:exon:19472;Parent=Msa0617430-mRNA-1
chr4_2 exon 67919191 67919244 67919191 ID=Msa0617430-mRNA-1:exon:19473;Parent=Msa0617430-mRNA-1
chr4_2 exon 67919341 67919415 67919341 ID=Msa0617430-mRNA-1:exon:19474;Parent=Msa0617430-mRNA-1
chr4_2 exon 67919539 67919592 67919539 ID=Msa0617430-mRNA-1:exon:19475;Parent=Msa0617430-mRNA-1
chr4_2 exon 67920011 67920055 67920011 ID=Msa0617430-mRNA-1:exon:19476;Parent=Msa0617430-mRNA-1
chr4_2 exon 67920142 67920236 67920142 ID=Msa0617430-mRNA-1:exon:19477;Parent=Msa0617430-mRNA-1
chr4_2 exon 67920324 67920453 67920324 ID=Msa0617430-mRNA-1:exon:19478;Parent=Msa0617430-mRNA-1
chr4_2 exon 67921041 67921139 67921041 ID=Msa0617430-mRNA-1:exon:19479;Parent=Msa0617430-mRNA-1
chr4_2 exon 67921377 67921432 67921377 ID=Msa0617430-mRNA-1:exon:19480;Parent=Msa0617430-mRNA-1
chr4_2 exon 67921715 67921817 67921715 ID=Msa0617430-mRNA-1:exon:19481;Parent=Msa0617430-mRNA-1
chr4_2 exon 67923394 67923563 67923394 ID=Msa0617430-mRNA-1:exon:19482;Parent=Msa0617430-mRNA-1
chr4_2 exon 67923811 67923835 67923811 ID=Msa0617430-mRNA-1:exon:19483;Parent=Msa0617430-mRNA-1
chr4_2 exon 67923940 67924055 67923940 ID=Msa0617430-mRNA-1:exon:19484;Parent=Msa0617430-mRNA-1
chr4_2 exon 67924380 67925048 67924380 ID=Msa0617430-mRNA-1:exon:19485;Parent=Msa0617430-mRNA-1
chr4_2 five_prime_UTR 67916867 67916909 67916867 ID=Msa0617430-mRNA-1:five_prime_utr;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67916910 67917959 67916910 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67918047 67918100 67918047 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67918310 67918422 67918310 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67918540 67918734 67918540 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67918843 67918921 67918843 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67919191 67919244 67919191 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67919341 67919415 67919341 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67919539 67919592 67919539 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67920011 67920055 67920011 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67920142 67920236 67920142 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67920324 67920453 67920324 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67921041 67921139 67921041 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67921377 67921432 67921377 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67921715 67921817 67921715 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67923394 67923563 67923394 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67923811 67923835 67923811 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67923940 67924055 67923940 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 CDS 67924380 67924467 67924380 ID=Msa0617430-mRNA-1:cds;Parent=Msa0617430-mRNA-1
chr4_2 three_prime_UTR 67924468 67925048 67924468 ID=Msa0617430-mRNA-1:three_prime_utr;Parent=Msa0617430-mRNA-1
Gene Sequence

>Msa0617430

ATGCAGTTTGATTCCGATTCAGACTCCGACGGATCTCACATTTCTTCAACTCCGCCAAGACAACAACCAAGTTCACCATCACCGCCAAAACCACCTCTTCCAGTTTCAAACAAAAAATGGAAATCCAAAACCAAACCCTCAAAATCCAATAAACCCCTTCCTAAACCCCCCGAAATTATTCCCGAACAAGAATCTTTCCCCTTCCCTTCCATCCCCTCACTTCCTTTCAACATCCGACAACGAACGTCTGACGCTCCTTCAACTTCATCTTCTCACTCTATCGAAACCCTCCCTGCCGGATTCTTCTCCAAATCAATTTCATTCTCCAAAATTCGTAAACCCTTACTCAATCTAGAAACTTCCGAAGCCGAACCGGTTGTTGATTCTGCAAAAACTGTAGCGAAATCTGTGAAGAAACATCCTAATTTGATAGGTGCTAGTGTGGTAACGCCGATAGTCAAGGCACTAAAAGGCGCCGGAGAAGGAAATTTTGTGAAATTGAATTTGAATGGGAAGAGGAAAAAGTTTTTGAATAAAGGGTGGACGAAAAATGGAAAATTTGGTAGTGGTAAAAGGTATTTTAGAAATAGTAATGGCAGCAATAGTGGTAGAAGTAGTAGAAGTAAACGTATAAAATCGGAACACAAAGAAGGCGATGATGATGATGAGGAGGAGGATGGTATGGGTGTTGAGAATGCAAAGCAACAGGAAAAGAAGAATGGTTGGGAAAATGAATGCAAAGTGTTGGAGGAGGCTGTGTTAGCAGCAAGAGATGAAGCTTCTGATGAGAATTTGGTGAAGTTGTTGAAATTGATTCATGGTTTTGATTCTTTTCGAGAGGGGCAGCTTGAGGCGATTAAGAATGTGCTTGCTGGGAAATCGACGATGCTTATTTTGCCGACGGGTGCTGGGAAGTCGCTGTGTTATCAGTTGAGTGCGTTGATTTTGCCTGGGATTACGCTTGTTGTTAGTCCTTTGGTAGCTTTGATGATTGATCAGCTTCGACAATTGCCTCCGCTCATTTCGGGCGCTCTTCTAAGCAGTGCTCAGTCATTTGAAGAATCCTCTGAAACACTCAACCAGCTTCGTCAAGGCACAATAAAGGTGCTTTTTGTTTCACCAGAGCGATTCTTGAATGAAGAATTTCTGTCTGTTATCTCTGGTGGGTTAGCCGTCTCACTTGTTGTTATTGATGAAGCACATTGTATATCTGAATGGTCTCACAATTTCCGACCTTCATTCATGAGACTCAGAGCGTCACTACTTCATAAGAGTCTTAATGTAGGTTCTATTCTTGCAATGACAGCAACTGCTACAACCATGACTTTAGATGCCATTATGTCTGCCCTGGATATTCCTTGCACAAATCTTATTCTAAATGCGCACTTAAGGGACAATTTGCGTTTGTCTGTAATGAAAGACCTACTGGTGCTTATGAAGTCTTCACCTTTTGCGGAAGTTAAAAGCATCATAGTATACTGCAAATTTCAGTCTGAAACTGATCAAATTAGCAGATATTTGAATGATAACAACATCAAGGCAAAGAGTTATCATAGTGGTATTTCTGCAAAGGAACGTGGCTACGTACAGGAGTTGTTTGGTTCAAACAAGATCAGAGTGGTTGTTGCAACTGTGGCATTTGGCATGGGACTAGATAAAAGAGATGTTGGAGCAGTAATTCATTACAGTTTACCTGGAAGTCTGGAAGAGTATGTACAGGAGATAGGACGTGCCGGAAGGGACGGGAGGTTGTCCTATTGTCACCTATTTTATGATGATGAGATGTATTTCAAACTTCGTAGTCTAATGTACAGTGAAGGAATCGATGAATATGCAGTGAATAAATTTCTGTCTGAAGTGTTTCCTGCTGACAAAAGCTCCTGTGGGAAAATATGTTCGTTAATCAAAGAACCTGCTTCACGCAGGTTTGATATGAAAGAAGAGGTGATTCTCACAGTTTTGACACGCTTGGAGCTGGGTGACGTGCAGTACTTACATTTACTTCCACAGACAAATGCAACGTGTGTTCTGAGTTTTCATATGACTCCGGCTGTGTCCCTTGCCCAAAAGGTTTCTGCTATTGCTGTGATTCTGAAAAGATCTGAAAATAAGCACGGACAATATACTTTTGATATTCCAACTGTGGCAAATGACATGGGGGTCACACCAGTTGAATTAACAAATCAGTTGTATGCCCTAAAGGTACGAAAAATGGATGCAATGTTTAATGCTGCATATTTTGCAGTAAATCTATGTGATAAGATGAACGGTTGCAGTAGTTTTGATCACACTTCATGCTTGCAAAGGATAATATTGGATTACTTTGCTGGAGTTGATAATGCTGATTTCTGCAAGAAAATTGATCAAAGCAGTCGTTTCCTGCGGGCAGATATAAAGGTTTTTCTACAGAGCAATTCGCATACTCGCTTTACACCAAGAGCTGTTGCGAGGGTAATGCACGGAATTGCAAGCCCAGCCTACCCTTATACAATATGGGGTAAAACCCATTTCTGGGGAAGGTATACCAAGATAGACTTTAAGGTGGTGATGGAAGCAGCTAAGGAAGAACTTAAAAAATTTATTGGAAAAGATTTACTCTAA
Protein sequence

>Msa0617430

MQFDSDSDSDGSHISSTPPRQQPSSPSPPKPPLPVSNKKWKSKTKPSKSNKPLPKPPEIIPEQESFPFPSIPSLPFNIRQRTSDAPSTSSSHSIETLPAGFFSKSISFSKIRKPLLNLETSEAEPVVDSAKTVAKSVKKHPNLIGASVVTPIVKALKGAGEGNFVKLNLNGKRKKFLNKGWTKNGKFGSGKRYFRNSNGSNSGRSSRSKRIKSEHKEGDDDDEEEDGMGVENAKQQEKKNGWENECKVLEEAVLAARDEASDENLVKLLKLIHGFDSFREGQLEAIKNVLAGKSTMLILPTGAGKSLCYQLSALILPGITLVVSPLVALMIDQLRQLPPLISGALLSSAQSFEESSETLNQLRQGTIKVLFVSPERFLNEEFLSVISGGLAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKSLNVGSILAMTATATTMTLDAIMSALDIPCTNLILNAHLRDNLRLSVMKDLLVLMKSSPFAEVKSIIVYCKFQSETDQISRYLNDNNIKAKSYHSGISAKERGYVQELFGSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPGSLEEYVQEIGRAGRDGRLSYCHLFYDDEMYFKLRSLMYSEGIDEYAVNKFLSEVFPADKSSCGKICSLIKEPASRRFDMKEEVILTVLTRLELGDVQYLHLLPQTNATCVLSFHMTPAVSLAQKVSAIAVILKRSENKHGQYTFDIPTVANDMGVTPVELTNQLYALKVRKMDAMFNAAYFAVNLCDKMNGCSSFDHTSCLQRIILDYFAGVDNADFCKKIDQSSRFLRADIKVFLQSNSHTRFTPRAVARVMHGIASPAYPYTIWGKTHFWGRYTKIDFKVVMEAAKEELKKFIGKDLL*