AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0656400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0656400 MtrunA17_Chr8g0377041 91.457 913 26 3 1 862 1 912 0.0 1687
Msa0656400 MtrunA17_Chr2g0300871 39.833 359 194 9 260 599 25 380 5.26e-61 220
Msa0656400 MtrunA17_Chr2g0277541 35.775 355 208 6 270 608 401 751 8.32e-60 221
Msa0656400 MtrunA17_Chr1g0192571 37.353 340 185 9 271 589 197 529 2.44e-59 213
Msa0656400 MtrunA17_Chr5g0409101 36.578 339 189 9 272 589 84 417 2.03e-54 201
Msa0656400 MtrunA17_Chr3g0108851 35.465 344 195 8 263 589 2 335 7.22e-50 190
Msa0656400 MtrunA17_Chr1g0192101 32.340 235 140 7 250 470 135 364 2.12e-26 116
Msa0656400 MtrunA17_Chr1g0192101 33.679 193 106 5 489 661 510 700 1.48e-21 100
Msa0656400 MtrunA17_Chr2g0330401 25.225 333 214 9 282 589 122 444 1.96e-15 80.1
Msa0656400 MtrunA17_Chr3g0107851 25.145 346 218 11 282 595 143 479 1.76e-14 77.4
Msa0656400 MtrunA17_Chr2g0293631 22.741 343 235 10 274 594 514 848 6.55e-14 76.3
Msa0656400 MtrunA17_Chr4g0076491 23.037 382 238 14 267 601 296 668 1.52e-13 74.7
Msa0656400 MtrunA17_Chr1g0200181 30.233 129 85 1 462 590 377 500 7.97e-13 72.0
Msa0656400 MtrunA17_Chr6g0449911 24.069 349 219 13 274 592 183 515 9.57e-13 72.0
Msa0656400 MtrunA17_Chr5g0409981 22.523 444 261 11 211 589 31 456 1.55e-12 71.2
Msa0656400 MtrunA17_Chr2g0297261 29.231 130 90 1 485 612 272 401 1.70e-12 70.5
Msa0656400 MtrunA17_Chr6g0461751 24.796 367 213 16 267 592 149 493 2.56e-12 70.5
Msa0656400 MtrunA17_Chr1g0157691 28.682 129 87 1 462 590 379 502 2.00e-11 67.8
Msa0656400 MtrunA17_Chr6g0449741 22.466 365 227 13 282 601 275 628 7.95e-11 65.9
Msa0656400 MtrunA17_Chr7g0263771 24.053 449 285 15 207 618 75 504 8.73e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0656400 AT1G27880.1 50.695 935 357 15 3 862 1 906 0.0 835
Msa0656400 AT1G27880.2 50.000 874 333 15 3 801 1 845 0.0 739
Msa0656400 AT4G35740.1 36.451 417 220 12 260 636 19 430 1.92e-61 222
Msa0656400 AT1G10930.1 36.236 356 205 7 270 608 446 796 3.29e-59 220
Msa0656400 AT1G31360.8 37.758 339 185 8 272 589 84 417 3.47e-58 208
Msa0656400 AT1G31360.4 37.758 339 185 8 272 589 84 417 3.47e-58 208
Msa0656400 AT1G31360.7 37.758 339 185 8 272 589 84 417 6.92e-58 208
Msa0656400 AT1G31360.5 37.758 339 185 8 272 589 84 417 1.14e-57 208
Msa0656400 AT3G05740.2 35.422 367 208 11 254 601 103 459 2.02e-57 206
Msa0656400 AT1G31360.6 37.758 339 185 8 272 589 84 417 4.21e-57 208
Msa0656400 AT1G31360.1 37.758 339 185 8 272 589 84 417 6.45e-57 209
Msa0656400 AT1G31360.3 37.758 339 185 8 272 589 118 451 7.07e-57 209
Msa0656400 AT3G05740.1 34.648 355 203 8 254 589 188 532 2.32e-56 205
Msa0656400 AT1G31360.2 37.374 297 160 8 314 589 1 292 3.18e-44 169
Msa0656400 AT4G35740.2 32.836 335 181 11 341 636 8 337 1.89e-36 147
Msa0656400 AT5G27680.5 32.258 217 124 7 268 469 29 237 1.63e-24 110
Msa0656400 AT5G27680.5 34.737 190 102 5 489 657 371 559 2.58e-21 100
Msa0656400 AT5G27680.6 32.258 217 124 7 268 469 159 367 2.38e-24 110
Msa0656400 AT5G27680.1 32.258 217 124 7 268 469 159 367 2.73e-24 110
Msa0656400 AT5G27680.1 34.737 190 102 5 489 657 501 689 3.20e-21 100
Msa0656400 AT5G27680.4 32.258 217 124 7 268 469 159 367 2.73e-24 110
Msa0656400 AT5G27680.4 34.737 190 102 5 489 657 501 689 3.20e-21 100
Msa0656400 AT5G27680.3 32.258 217 124 7 268 469 159 367 2.73e-24 110
Msa0656400 AT5G27680.3 34.737 190 102 5 489 657 501 689 3.20e-21 100
Msa0656400 AT5G27680.2 32.258 217 124 7 268 469 159 367 2.73e-24 110
Msa0656400 AT5G27680.2 34.737 190 102 5 489 657 501 689 3.20e-21 100
Msa0656400 AT4G33370.1 23.894 339 219 9 282 590 124 453 5.90e-16 82.4
Msa0656400 AT1G55150.1 25.672 335 210 9 282 589 126 448 4.83e-15 79.3
Msa0656400 AT1G55150.2 25.994 327 203 9 290 589 159 473 9.93e-15 78.6
Msa0656400 AT5G63120.2 23.373 338 230 9 274 589 184 514 1.25e-14 78.6
Msa0656400 AT1G31970.1 24.339 378 239 10 247 589 105 470 2.60e-14 77.0
Msa0656400 AT3G01540.1 23.209 349 228 11 271 592 174 509 1.88e-13 74.7
Msa0656400 AT3G01540.4 23.209 349 228 11 271 592 174 509 1.90e-13 74.7
Msa0656400 AT3G01540.2 23.209 349 228 11 271 592 174 509 1.90e-13 74.7
Msa0656400 AT3G01540.3 23.209 349 228 11 271 592 174 509 1.90e-13 74.7
Msa0656400 AT5G14610.6 23.889 360 222 14 267 592 171 512 3.97e-13 73.6
Msa0656400 AT5G14610.2 23.889 360 222 14 267 592 171 512 4.25e-13 73.6
Msa0656400 AT5G14610.5 23.889 360 222 14 267 592 179 520 4.29e-13 73.6
Msa0656400 AT5G51280.1 22.096 353 208 10 282 590 173 502 9.45e-13 72.4
Msa0656400 AT5G14610.1 23.932 351 217 13 274 592 248 580 1.19e-12 72.4
Msa0656400 AT5G14610.7 35.238 105 67 1 488 592 278 381 1.80e-12 71.2
Msa0656400 AT5G14610.3 35.238 105 67 1 488 592 278 381 1.80e-12 71.2
Msa0656400 AT3G19760.1 30.769 130 88 1 485 612 274 403 2.42e-12 70.5
Msa0656400 AT2G33730.1 31.092 119 79 1 486 601 577 695 5.02e-12 70.5
Msa0656400 AT2G42520.2 23.055 347 222 11 282 591 186 524 6.59e-12 69.7
Msa0656400 AT2G42520.1 23.055 347 222 11 282 591 186 524 6.59e-12 69.7
Msa0656400 AT2G42520.3 23.055 347 222 11 282 591 186 524 6.59e-12 69.7
Msa0656400 AT3G06480.1 23.615 343 232 10 274 594 454 788 5.27e-11 67.4

Find 214 sgRNAs with CRISPR-Local

Find 568 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATCATTCATTATTGTATA+TGG 0.189476 4_3:-65680801 None:intergenic
GAGTAAGGGTTTACGAATTT+TGG 0.198750 4_3:-65673219 None:intergenic
CAATTGCCTCCGCTCATTTC+GGG 0.221496 4_3:+65673899 Msa0656400:CDS
ATGCTTGCAAAGGATAATAT+TGG 0.238086 4_3:+65679452 Msa0656400:CDS
TTCTTGTTCGGGAATAATTT+CGG 0.253382 4_3:-65673063 None:intergenic
CAGCCTACCCTTATACAATA+TGG 0.255516 4_3:+65679982 Msa0656400:CDS
CAGCAATAGCAGAAACCTTT+TGG 0.258260 4_3:-65677370 None:intergenic
ACATCTCATCATCATAAAAT+AGG 0.269389 4_3:-65676166 None:intergenic
GTATACCAAGATAGACTTTA+AGG 0.273733 4_3:+65680352 Msa0656400:CDS
CATAGTATACTGCAAATTTC+AGG 0.277071 4_3:+65674884 Msa0656400:CDS
GAAAATTTGGTAGTGGTAAA+AGG 0.277686 4_3:+65673447 Msa0656400:CDS
CCGATAGTCAAGGCACTAAA+AGG 0.286757 4_3:+65673344 Msa0656400:CDS
TGAAGCTTCTGATGAGAATT+TGG 0.290524 4_3:+65673667 Msa0656400:CDS
TTTGGAGAATGAAATTGATT+TGG 0.292930 4_3:-65673201 None:intergenic
ATAATATTGGATTACTTTGC+TGG 0.294888 4_3:+65679465 Msa0656400:CDS
ACAATTGCCTCCGCTCATTT+CGG 0.302918 4_3:+65673898 Msa0656400:CDS
ACACTAGCACATATCAAATT+AGG 0.307275 4_3:-65673314 None:intergenic
TCGACTAATCCAAACCTTTA+GGG 0.310744 4_3:-65677783 None:intergenic
TATGGGGTAAAACCCATTTC+TGG 0.313223 4_3:+65680000 Msa0656400:CDS
TAAGGGACTCGGTGCAAATT+TGG 0.316268 4_3:-65680456 None:intergenic
AACTGATTTGTTAATTCAAC+TGG 0.319696 4_3:-65677755 None:intergenic
TCTTGTTCGGGAATAATTTC+GGG 0.325867 4_3:-65673062 None:intergenic
TTTCACAAAATTTCCTTCTC+TGG 0.348625 4_3:-65673369 None:intergenic
TTATTCTAAATGCGCACTTA+AGG 0.353628 4_3:+65674676 Msa0656400:CDS
TGTGCAAAACAGTTAGTATA+AGG 0.357396 4_3:+65680898 Msa0656400:three_prime_UTR
ATCAACAACCGGTTCGGCTT+CGG 0.359769 4_3:-65673255 None:intergenic
CAATGCACAGATGTCTTTAC+TGG 0.362390 4_3:-65680479 None:intergenic
GGCTGTGTCCCTTGCCCAAA+AGG 0.373276 4_3:+65677355 Msa0656400:CDS
GAAACTGGAAGAGGTGGTTT+TGG 0.373861 4_3:-65672978 None:intergenic
AATCATTCATTATTGTATAT+GGG 0.376821 4_3:-65680800 None:intergenic
CATTGATTGAAGGTGGGGCG+GGG 0.382722 4_3:+65680497 Msa0656400:three_prime_UTR
ACATACTCTTCCAGACTTCC+AGG 0.383363 4_3:-65676009 None:intergenic
TATTCTAAATGCGCACTTAA+GGG 0.388305 4_3:+65674677 Msa0656400:CDS
GGAAGTTTCTAGATTGAGTA+AGG 0.388344 4_3:-65673234 None:intergenic
GGGTTTAGGAAGGGGTTTAT+TGG 0.388852 4_3:-65673039 None:intergenic
AAGGGGAAAGATTCTTGTTC+GGG 0.395512 4_3:-65673074 None:intergenic
CATTATATGTGCGACCTAGA+TGG 0.396685 4_3:+65680644 Msa0656400:three_prime_UTR
TTACAGTTTACCTGGAAGTC+TGG 0.398808 4_3:+65675999 Msa0656400:CDS
TACGCTTGTTGTTAGTCCTT+TGG 0.400050 4_3:+65673850 Msa0656400:CDS
GGTGAACTTGGTTGTTGTCT+TGG 0.401617 4_3:-65672948 None:intergenic
GCGATTAAGAATGTGCTTGC+TGG 0.402170 4_3:+65673746 Msa0656400:CDS
TTTGTGAAATTGAATTTGAA+TGG 0.407525 4_3:+65673383 Msa0656400:CDS
GCATTGATTGAAGGTGGGGC+GGG 0.412840 4_3:+65680496 Msa0656400:three_prime_UTR
AATATCCAGGGCAGACATAA+TGG 0.413104 4_3:-65674640 None:intergenic
GAGTGAGAAGATGAAGTTGA+AGG 0.417070 4_3:-65673149 None:intergenic
AAATCAGTTGTATGCCCTAA+AGG 0.419124 4_3:+65677769 Msa0656400:CDS
GTTGTTGCAACTGTGGCATT+TGG 0.419325 4_3:+65675522 Msa0656400:CDS
TTCTGTCTGTTATCTCTGGT+GGG 0.425312 4_3:+65674334 Msa0656400:CDS
GAATTTCTGTCTGTTATCTC+TGG 0.426044 4_3:+65674330 Msa0656400:CDS
AGCCTACCCTTATACAATAT+GGG 0.426403 4_3:+65679983 Msa0656400:CDS
TTTCCTGCGGGCAGATATAA+AGG 0.426465 4_3:+65679780 Msa0656400:CDS
GCTTCGTCAAGGCACAATAA+AGG 0.426914 4_3:+65674063 Msa0656400:CDS
TAGAAGTAAACGTATAAAAT+CGG 0.428317 4_3:+65673511 Msa0656400:CDS
AGAAACTTCCGAAGCCGAAC+CGG 0.431878 4_3:+65673247 Msa0656400:CDS
CGCTGCCTGTCTGTTACTCC+AGG 0.432791 4_3:+65680585 Msa0656400:three_prime_UTR
GTGAGGGGATGGAAGGGAAG+GGG 0.436156 4_3:-65673091 None:intergenic
TTTCTGTCTGTTATCTCTGG+TGG 0.437888 4_3:+65674333 Msa0656400:CDS
TGCAGAATCAACAACCGGTT+CGG 0.440717 4_3:-65673261 None:intergenic
AACTAATCCCTCAGGTCAAA+AGG 0.442552 4_3:+65680729 Msa0656400:three_prime_UTR
CCCATGTCATTTGCCACAGT+TGG 0.444192 4_3:-65677725 None:intergenic
TGATGAGGAGGAGGATGGTA+TGG 0.445277 4_3:+65673556 Msa0656400:CDS
AAGTGAGGGGATGGAAGGGA+AGG 0.445403 4_3:-65673093 None:intergenic
CATATTGTATAAGGGTAGGC+TGG 0.448678 4_3:-65679981 None:intergenic
AAGTTGTTGAAATTGATTCA+TGG 0.451160 4_3:+65673692 Msa0656400:CDS
ATCATAAAATAGGTGACAAT+AGG 0.453000 4_3:-65676156 None:intergenic
GGACAACCTCCCATCCCTTC+CGG 0.453112 4_3:-65676135 None:intergenic
GGACTAGATAAAAGAGATGT+TGG 0.458565 4_3:+65675549 Msa0656400:CDS
CACCACCTTAAAGTCTATCT+TGG 0.460065 4_3:-65680357 None:intergenic
TGTTGAGAATGCAAAGCAAC+AGG 0.462500 4_3:+65673580 Msa0656400:CDS
GGCTACGTACAGGAGTTGTT+TGG 0.463664 4_3:+65675358 Msa0656400:CDS
GAAGGGGAAAGATTCTTGTT+CGG 0.466450 4_3:-65673075 None:intergenic
ATAGGACGTGCCGGAAGGGA+TGG 0.469051 4_3:+65676125 Msa0656400:CDS
CACAGATGTCTTTACTGGTA+AGG 0.469053 4_3:-65680474 None:intergenic
GTTCGTTGTCGGATGTTGAA+AGG 0.469108 4_3:-65673116 None:intergenic
AATTGATTTGGAGAAGAATC+CGG 0.470308 4_3:-65673189 None:intergenic
AATAGTAATGGCAGCAATAG+TGG 0.470939 4_3:+65673479 Msa0656400:CDS
TGCAACTGTGGCATTTGGCA+TGG 0.471083 4_3:+65675527 Msa0656400:CDS
AGATCCGTCGGAGTCTGAAT+CGG 0.477155 4_3:-65672907 None:intergenic
AAAGGAAGTGAGGGGATGGA+AGG 0.478336 4_3:-65673098 None:intergenic
CGCTCTTCTAAGCAGTGCTC+AGG 0.478699 4_3:+65673922 Msa0656400:CDS
AGTGAGGGGATGGAAGGGAA+GGG 0.479047 4_3:-65673092 None:intergenic
ATTACCCTCGCAACAGCTCT+TGG 0.487754 4_3:-65679942 None:intergenic
TCTTCATTCAAGAATCGCTC+TGG 0.488566 4_3:-65674309 None:intergenic
AAGGAAGTGAGGGGATGGAA+GGG 0.488949 4_3:-65673097 None:intergenic
ATATCAAACCTGCGTGAAGC+AGG 0.492622 4_3:-65676401 None:intergenic
GAATGGGCATTGTAGGAGAT+AGG 0.495642 4_3:+65676107 Msa0656400:intron
TAGGACGTGCCGGAAGGGAT+GGG 0.496615 4_3:+65676126 Msa0656400:CDS
TCCCTCAGGTCAAAAGGAAA+AGG 0.497113 4_3:+65680735 Msa0656400:three_prime_UTR
ATTGATTGAAGGTGGGGCGG+GGG 0.498392 4_3:+65680498 Msa0656400:three_prime_UTR
GCAACTGTGGCATTTGGCAT+GGG 0.498488 4_3:+65675528 Msa0656400:CDS
TTTGGCGGTGATGGTGAACT+TGG 0.500420 4_3:-65672960 None:intergenic
CGATTAAGAATGTGCTTGCT+GGG 0.501188 4_3:+65673747 Msa0656400:CDS
GAGCGTCAGACGTTCGTTGT+CGG 0.501622 4_3:-65673127 None:intergenic
TTGTGAAATTGAATTTGAAT+GGG 0.503178 4_3:+65673384 Msa0656400:CDS
AGATGCCATTATGTCTGCCC+TGG 0.503557 4_3:+65674635 Msa0656400:CDS
GTCTTTACTGGTAAGGGACT+CGG 0.505202 4_3:-65680467 None:intergenic
TTATAGAATGAAAGACCTAC+TGG 0.506852 4_3:+65674821 Msa0656400:intron
GATCGGAGAAGAAGAACAAA+GGG 0.512824 4_3:-65672865 None:intergenic
AACAGGAAAAGAAGAATGGT+TGG 0.514174 4_3:+65673597 Msa0656400:CDS
TCCAACTGTGGCAAATGACA+TGG 0.515681 4_3:+65677724 Msa0656400:CDS
GTTGAAAGGAAGTGAGGGGA+TGG 0.516695 4_3:-65673102 None:intergenic
ATCCTTGATTCCTTCCATCT+AGG 0.520433 4_3:-65680658 None:intergenic
GGTGGTGATGGAAGCAGCTA+AGG 0.525244 4_3:+65680373 Msa0656400:CDS
AATTGAATTTGAATGGGAAG+AGG 0.525991 4_3:+65673390 Msa0656400:CDS
GATAGACTTTAAGGTGGTGA+TGG 0.527217 4_3:+65680361 Msa0656400:CDS
GCAAGAAAATTGATCAAAGC+AGG 0.527941 4_3:+65679508 Msa0656400:CDS
TGCATTGATTGAAGGTGGGG+CGG 0.528493 4_3:+65680495 Msa0656400:three_prime_UTR
ATCACACTTCATGCTTGCAA+AGG 0.529036 4_3:+65679442 Msa0656400:CDS
GAACTTGGTTGTTGTCTTGG+CGG 0.531364 4_3:-65672945 None:intergenic
ATCATTCATTATTGTATATG+GGG 0.531507 4_3:-65680799 None:intergenic
GTTGTAGAAACTAATCCCTC+AGG 0.534801 4_3:+65680721 Msa0656400:three_prime_UTR
GGAGAAGAATCCGGCAGGGA+GGG 0.536997 4_3:-65673180 None:intergenic
CGGATGTTGAAAGGAAGTGA+GGG 0.537562 4_3:-65673107 None:intergenic
CTATTGCTGTGATTCTGAAA+AGG 0.538068 4_3:+65677384 Msa0656400:CDS
TTGTTTGAAACTGGAAGAGG+TGG 0.539207 4_3:-65672984 None:intergenic
ACAGGAAAAGAAGAATGGTT+GGG 0.539988 4_3:+65673598 Msa0656400:CDS
GCACTAAAAGGCGCCAGAGA+AGG 0.542441 4_3:+65673356 Msa0656400:CDS
CCTGCTGACAAAAGCTCCTG+TGG 0.542681 4_3:+65676353 Msa0656400:CDS
TCATAGTGGTATTTCTGCAA+AGG 0.548833 4_3:+65675330 Msa0656400:CDS
CTTCATAAGAGTCTTAATGT+AGG 0.549838 4_3:+65674570 Msa0656400:CDS
GACCTAGATGGAAGGAATCA+AGG 0.549875 4_3:+65680656 Msa0656400:three_prime_UTR
GATTTGTGCAAGGAATATCC+AGG 0.550259 4_3:-65674653 None:intergenic
TTATTGTGCCTTGACGAAGC+TGG 0.551129 4_3:-65674060 None:intergenic
GTAATTCATTACAGTTTACC+TGG 0.551307 4_3:+65675991 Msa0656400:CDS
AAATGAATGCAAAGTGTTGG+AGG 0.552542 4_3:+65673622 Msa0656400:CDS
AAAGGAACGTGGCTACGTAC+AGG 0.554701 4_3:+65675348 Msa0656400:CDS
AACTTCGTAGTCTAATGTAC+AGG 0.555989 4_3:+65676195 Msa0656400:CDS
TCTAGGTCGCACATATAATG+AGG 0.557415 4_3:-65680641 None:intergenic
TCGGATGTTGAAAGGAAGTG+AGG 0.557472 4_3:-65673108 None:intergenic
CATACGCAGTCGTTTCCTGC+GGG 0.558788 4_3:+65679768 Msa0656400:intron
CTGGAGTAACAGACAGGCAG+CGG 0.559802 4_3:-65680584 None:intergenic
GACATCTGTGCATTGATTGA+AGG 0.562300 4_3:+65680487 Msa0656400:three_prime_UTR
ATATTGTATAAGGGTAGGCT+GGG 0.562876 4_3:-65679980 None:intergenic
CGATGATGATGATGAGGAGG+AGG 0.563127 4_3:+65673547 Msa0656400:CDS
ATCATTTAGAGTTATCATAG+TGG 0.565678 4_3:+65675316 Msa0656400:intron
AAGCAACAGGAAAAGAAGAA+TGG 0.566070 4_3:+65673593 Msa0656400:CDS
GATGAGGAGGAGGATGGTAT+GGG 0.566294 4_3:+65673557 Msa0656400:CDS
AGGCGATGATGATGATGAGG+AGG 0.566831 4_3:+65673544 Msa0656400:CDS
ATAAAATCGGAACACAAAGA+AGG 0.567266 4_3:+65673524 Msa0656400:CDS
TTTGAATGATAACAACATCA+AGG 0.569180 4_3:+65675201 Msa0656400:CDS
GGAAAATGAATGCAAAGTGT+TGG 0.569609 4_3:+65673619 Msa0656400:CDS
CTCGGTGCAAATTTGGCAGA+TGG 0.570380 4_3:-65680449 None:intergenic
TCTATCGAAACCCTCCCTGC+CGG 0.570984 4_3:+65673170 Msa0656400:CDS
GGATCGGAGAAGAAGAACAA+AGG 0.573245 4_3:-65672866 None:intergenic
GCTCTGAGTCTCATGAATGA+AGG 0.573682 4_3:-65674540 None:intergenic
ATCAATAACAACAAGTGAGA+CGG 0.574473 4_3:-65674361 None:intergenic
ACCCCATATTGTATAAGGGT+AGG 0.574497 4_3:-65679985 None:intergenic
TGAAGAAATGTGAGATCCGT+CGG 0.576644 4_3:-65672919 None:intergenic
CTTGTTCGGGAATAATTTCG+GGG 0.580017 4_3:-65673061 None:intergenic
GATTTGGAGAAGAATCCGGC+AGG 0.580592 4_3:-65673185 None:intergenic
GAGAAGAAGAACAAAGGGAA+AGG 0.582175 4_3:-65672860 None:intergenic
TTCAGATCTGAAAATAAGCA+CGG 0.583131 4_3:+65677683 Msa0656400:intron
AGAAGAAGAACAAAGGGAAA+GGG 0.583287 4_3:-65672859 None:intergenic
CATAATGGCATCTAAAGTCA+TGG 0.585243 4_3:-65674625 None:intergenic
ACAGATGTCTTTACTGGTAA+GGG 0.586297 4_3:-65680473 None:intergenic
GGAGATAGGACGTGCCGGAA+GGG 0.586499 4_3:+65676121 Msa0656400:intron
TGTGGTAACGCCGATAGTCA+AGG 0.586656 4_3:+65673334 Msa0656400:CDS
AAGCTGGTTGAGTGTTTCAG+AGG 0.587339 4_3:-65674044 None:intergenic
AAGTCTGGAAGAGTATGTAC+AGG 0.589387 4_3:+65676014 Msa0656400:CDS
CCAACTGTGGCAAATGACAT+GGG 0.590683 4_3:+65677725 Msa0656400:CDS
GATGATGATGAGGAGGAGGA+TGG 0.591373 4_3:+65673551 Msa0656400:CDS
GAAGTTTCTAGATTGAGTAA+GGG 0.593349 4_3:-65673233 None:intergenic
CTGCTGACAAAAGCTCCTGT+GGG 0.597436 4_3:+65676354 Msa0656400:CDS
AAGCACATTGTATATCTGAA+TGG 0.600670 4_3:+65674385 Msa0656400:CDS
TGATAACAACATCAAGGCAA+AGG 0.601528 4_3:+65675207 Msa0656400:CDS
TTGTAGGAGATAGGACGTGC+CGG 0.602571 4_3:+65676116 Msa0656400:intron
AGGAGATAGGACGTGCCGGA+AGG 0.602725 4_3:+65676120 Msa0656400:intron
GACGTGCCGGAAGGGATGGG+AGG 0.603769 4_3:+65676129 Msa0656400:CDS
TTACACCAAGAGCTGTTGCG+AGG 0.607759 4_3:+65679937 Msa0656400:CDS
TTTAGAATAAGATTTGTGCA+AGG 0.610553 4_3:-65674663 None:intergenic
TATGAAGGTTGTTGCAACTG+TGG 0.610759 4_3:+65675515 Msa0656400:intron
TACACCAAGAGCTGTTGCGA+GGG 0.610987 4_3:+65679938 Msa0656400:CDS
AATCTATGTGATAAGATGAA+CGG 0.611074 4_3:+65679405 Msa0656400:CDS
GCCTACCCTTATACAATATG+GGG 0.613022 4_3:+65679984 Msa0656400:CDS
TGAGTCTCATGAATGAAGGT+CGG 0.613163 4_3:-65674536 None:intergenic
ATCTGTGCATTGATTGAAGG+TGG 0.614434 4_3:+65680490 Msa0656400:three_prime_UTR
CTTGACCTGGAGTAACAGAC+AGG 0.614454 4_3:-65680590 None:intergenic
TCTGTGCATTGATTGAAGGT+GGG 0.615355 4_3:+65680491 Msa0656400:three_prime_UTR
TCAAAGAACCTGCTTCACGC+AGG 0.615491 4_3:+65676393 Msa0656400:CDS
AGAAGGCGATGATGATGATG+AGG 0.617816 4_3:+65673541 Msa0656400:CDS
CAGGTTTGATATGAAAGAAG+AGG 0.626887 4_3:+65676412 Msa0656400:CDS
CAACTGTGGCAAATGACATG+GGG 0.630786 4_3:+65677726 Msa0656400:CDS
TCACCTTTATATCTGCCCGC+AGG 0.632718 4_3:-65679783 None:intergenic
ACATGGCGCGAAACAACTGC+AGG 0.634740 4_3:-65680538 None:intergenic
TCAATCATCAAAGCTACCAA+AGG 0.636069 4_3:-65673866 None:intergenic
ACACTCAACCAGCTTCGTCA+AGG 0.636248 4_3:+65674052 Msa0656400:CDS
AGAAGAGCGCCCGAAATGAG+CGG 0.636804 4_3:-65673908 None:intergenic
CTAGGTCGCACATATAATGA+GGG 0.638576 4_3:-65680640 None:intergenic
TTGTTCGGGAATAATTTCGG+GGG 0.640718 4_3:-65673060 None:intergenic
GGTATTTCTGCAAAGGAACG+TGG 0.641724 4_3:+65675337 Msa0656400:CDS
TAATTTGATATGTGCTAGTG+TGG 0.642817 4_3:+65673316 Msa0656400:CDS
ATATGTGCGACCTAGATGGA+AGG 0.643950 4_3:+65680648 Msa0656400:three_prime_UTR
AGGGATTAGTTTCTACAACA+AGG 0.644393 4_3:-65680717 None:intergenic
GAGTAACAGACAGGCAGCGG+CGG 0.644678 4_3:-65680581 None:intergenic
AGAAGAACAAAGGGAAAGGG+TGG 0.649089 4_3:-65672856 None:intergenic
ACACACGTTGCATTTGTCTG+TGG 0.649253 4_3:-65677081 None:intergenic
CTGTGCATTGATTGAAGGTG+GGG 0.649957 4_3:+65680492 Msa0656400:three_prime_UTR
AAGACTTCATAAGCACCAGT+AGG 0.660081 4_3:-65674836 None:intergenic
CTAACAACAAGCGTAATCCC+AGG 0.664152 4_3:-65673842 None:intergenic
ATTTGGAGAAGAATCCGGCA+GGG 0.667823 4_3:-65673184 None:intergenic
ACATACGCAGTCGTTTCCTG+CGG 0.674845 4_3:+65679767 Msa0656400:intron
AACGACTTCCCAGCACCCGT+CGG 0.674866 4_3:-65673791 None:intergenic
ATTTGTGCAAGGAATATCCA+GGG 0.675764 4_3:-65674652 None:intergenic
TGGAGAAGAATCCGGCAGGG+AGG 0.677448 4_3:-65673181 None:intergenic
AGAGCGCCCGAAATGAGCGG+AGG 0.689601 4_3:-65673905 None:intergenic
TGTTCGGGAATAATTTCGGG+GGG 0.690236 4_3:-65673059 None:intergenic
GCTGTTGCGAGGGTAATGCA+CGG 0.692274 4_3:+65679948 Msa0656400:CDS
AACTGTGGCAAATGACATGG+GGG 0.692492 4_3:+65677727 Msa0656400:CDS
AATTTCAACAGTGAATAACA+TGG 0.699307 4_3:-65680555 None:intergenic
GATTCCGATTCAGACTCCGA+CGG 0.702398 4_3:+65672903 Msa0656400:CDS
TGAATGCAAAGTGTTGGAGG+AGG 0.703820 4_3:+65673625 Msa0656400:CDS
TACCAAGATAGACTTTAAGG+TGG 0.711526 4_3:+65680355 Msa0656400:CDS
GGATGTTGAAAGGAAGTGAG+GGG 0.717854 4_3:-65673106 None:intergenic
TGGTTCAAACAAGATCAGAG+TGG 0.733769 4_3:+65675378 Msa0656400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATCTATATTTATATATATG+TGG + chr4_3:65675117-65675136 Msa0656400:intron 10.0%
!! ATCTATATTTATATATATGT+GGG + chr4_3:65675118-65675137 Msa0656400:intron 10.0%
!!! TTTTTCTTATTAAATAGAAT+GGG + chr4_3:65676091-65676110 Msa0656400:intron 10.0%
!! TAAACATATATTAAATTTCT+TGG + chr4_3:65677413-65677432 Msa0656400:intron 10.0%
!!! GTTTAATTTGAAAATTTTAA+GGG - chr4_3:65678052-65678071 None:intergenic 10.0%
!!! AGTTTAATTTGAAAATTTTA+AGG - chr4_3:65678053-65678072 None:intergenic 10.0%
!!! TATATGATCTTAAATTTTTT+TGG + chr4_3:65679607-65679626 Msa0656400:intron 10.0%
!!! ATATGATCTTAAATTTTTTT+GGG + chr4_3:65679608-65679627 Msa0656400:intron 10.0%
!!! TTATATTTTGAAATTCTTAC+AGG + chr4_3:65674502-65674521 Msa0656400:intron 15.0%
!!! ATTTTTCAATTTTAAGGTAT+TGG + chr4_3:65674923-65674942 Msa0656400:intron 15.0%
!!! TTTTTCAATTTTAAGGTATT+GGG + chr4_3:65674924-65674943 Msa0656400:intron 15.0%
!!! ACAAATTTTAAATTGCAAAA+TGG + chr4_3:65675800-65675819 Msa0656400:intron 15.0%
!!! CAAATTTTAAATTGCAAAAT+GGG + chr4_3:65675801-65675820 Msa0656400:intron 15.0%
!!! AAATTTTAAATTGCAAAATG+GGG + chr4_3:65675802-65675821 Msa0656400:intron 15.0%
!!! GTTTTTCTTATTAAATAGAA+TGG + chr4_3:65676090-65676109 Msa0656400:intron 15.0%
!!! TGATAGAGTTTTATTTTTTA+TGG + chr4_3:65676833-65676852 Msa0656400:intron 15.0%
!! TTAAACCATAGTATAATTTA+CGG + chr4_3:65677200-65677219 Msa0656400:intron 15.0%
!!! TGGCTTATATTTTTAATTTT+TGG + chr4_3:65677316-65677335 Msa0656400:intron 15.0%
!!! TTTTCAAATTAAACTAAGAA+TGG + chr4_3:65678058-65678077 Msa0656400:intron 15.0%
!! ATTGTAGTATTTATATTTAG+AGG + chr4_3:65678959-65678978 Msa0656400:intron 15.0%
!!! ATATTTTATATCATTCATCT+AGG + chr4_3:65680285-65680304 Msa0656400:intron 15.0%
!! GAAGAACTTAAAAAATTTAT+TGG + chr4_3:65680395-65680414 Msa0656400:CDS 15.0%
!! AATCATTCATTATTGTATAT+GGG - chr4_3:65680803-65680822 None:intergenic 15.0%
!!! TGATTCTACTTTTTTTTTTT+AGG + chr4_3:65680818-65680837 Msa0656400:three_prime_UTR 15.0%
!!! GATTCTACTTTTTTTTTTTA+GGG + chr4_3:65680819-65680838 Msa0656400:three_prime_UTR 15.0%
!! TTTGTGAAATTGAATTTGAA+TGG + chr4_3:65673383-65673402 Msa0656400:CDS 20.0%
!! TTGTGAAATTGAATTTGAAT+GGG + chr4_3:65673384-65673403 Msa0656400:CDS 20.0%
!!! AGGAAAAAGTTTTTGAATAA+AGG + chr4_3:65673410-65673429 Msa0656400:CDS 20.0%
!!! GGAAAAAGTTTTTGAATAAA+GGG + chr4_3:65673411-65673430 Msa0656400:CDS 20.0%
!!! AGGTATTTTAGAAATAGTAA+TGG + chr4_3:65673467-65673486 Msa0656400:CDS 20.0%
!! TAGAAGTAAACGTATAAAAT+CGG + chr4_3:65673511-65673530 Msa0656400:CDS 20.0%
!!! TGAGAATGTTGATTATTTAT+AGG + chr4_3:65674171-65674190 Msa0656400:intron 20.0%
!! ATTGCAATTATAATTCTTAC+AGG + chr4_3:65674272-65674291 Msa0656400:intron 20.0%
!!! ATTATTTCTGTGAGTTAATA+AGG + chr4_3:65674441-65674460 Msa0656400:intron 20.0%
!! TCAAAATATAAAGATCAACA+CGG - chr4_3:65674493-65674512 None:intergenic 20.0%
!! TACATTAAAAAACTCAGATA+AGG - chr4_3:65674793-65674812 None:intergenic 20.0%
!!! GACTTCATTTTTCAATTTTA+AGG + chr4_3:65674917-65674936 Msa0656400:intron 20.0%
!!! GATTTTATTTCAAATACTGT+AGG - chr4_3:65675003-65675022 None:intergenic 20.0%
!! GTTATTAAATTATGTGTTTC+AGG + chr4_3:65675040-65675059 Msa0656400:intron 20.0%
!!! AATTTTAAATTGCAAAATGG+GGG + chr4_3:65675803-65675822 Msa0656400:intron 20.0%
!! AACAAGATAAAAGTAACTAT+CGG - chr4_3:65675884-65675903 None:intergenic 20.0%
!! TGTATATTAGAATTGAGTAA+AGG - chr4_3:65676439-65676458 None:intergenic 20.0%
!! CAATTACAAATTCCTAAAAA+TGG - chr4_3:65676695-65676714 None:intergenic 20.0%
!! GTGCATATTTATTTCATAAA+TGG - chr4_3:65676892-65676911 None:intergenic 20.0%
!! AAAATTAACAAACACAAGAT+GGG - chr4_3:65677251-65677270 None:intergenic 20.0%
!! AAAAATTAACAAACACAAGA+TGG - chr4_3:65677252-65677271 None:intergenic 20.0%
!!! AAATTTTCTGTTTCTACAAA+GGG + chr4_3:65677526-65677545 Msa0656400:intron 20.0%
!!! AGAATTTTTCACAAATAACA+AGG - chr4_3:65678795-65678814 None:intergenic 20.0%
!! AGAAATAACTTATGAAATGA+AGG + chr4_3:65678826-65678845 Msa0656400:intron 20.0%
!! AGATTGAAAAGTAGTTATTA+TGG + chr4_3:65679210-65679229 Msa0656400:intron 20.0%
!!! TTTTTTTGGGTATTGAAAAT+TGG + chr4_3:65679621-65679640 Msa0656400:intron 20.0%
!!! CACTTACAATAATAATTTTG+GGG - chr4_3:65679671-65679690 None:intergenic 20.0%
!!! GCACTTACAATAATAATTTT+GGG - chr4_3:65679672-65679691 None:intergenic 20.0%
!!! TGCACTTACAATAATAATTT+TGG - chr4_3:65679673-65679692 None:intergenic 20.0%
!! TTGTTGGTATGAAATAAATT+GGG + chr4_3:65680060-65680079 Msa0656400:intron 20.0%
!! TTACTTATTGATGTTATTGA+TGG - chr4_3:65680118-65680137 None:intergenic 20.0%
!! AACTTATGAAATAGAAAATC+TGG - chr4_3:65680148-65680167 None:intergenic 20.0%
!! ATTCAATGTTAAACAAAAGT+AGG - chr4_3:65680238-65680257 None:intergenic 20.0%
!! TAACATTGAATGTGTATTAT+TGG + chr4_3:65680247-65680266 Msa0656400:intron 20.0%
!! TAAAACTGAGATTTAAATTG+TGG + chr4_3:65680316-65680335 Msa0656400:intron 20.0%
!! ATCATTCATTATTGTATATG+GGG - chr4_3:65680802-65680821 None:intergenic 20.0%
!! GAATCATTCATTATTGTATA+TGG - chr4_3:65680804-65680823 None:intergenic 20.0%
! TTCCAGTTTCAAACAAAAAA+TGG + chr4_3:65672991-65673010 Msa0656400:CDS 25.0%
!!! TTCCATTTTTTGTTTGAAAC+TGG - chr4_3:65672996-65673015 None:intergenic 25.0%
! TTTGGAGAATGAAATTGATT+TGG - chr4_3:65673204-65673223 None:intergenic 25.0%
!! AAAAGTTTTTGAATAAAGGG+TGG + chr4_3:65673414-65673433 Msa0656400:CDS 25.0%
! TGGAAGAAAAATGGAAAATT+TGG + chr4_3:65673434-65673453 Msa0656400:CDS 25.0%
! AAAAATGGAAAATTTGGTAG+TGG + chr4_3:65673440-65673459 Msa0656400:CDS 25.0%
!! AAGTTGTTGAAATTGATTCA+TGG + chr4_3:65673692-65673711 Msa0656400:CDS 25.0%
! TCAAATGTGATATGTGAAAA+TGG - chr4_3:65674197-65674216 None:intergenic 25.0%
!! TTTAGAATAAGATTTGTGCA+AGG - chr4_3:65674666-65674685 None:intergenic 25.0%
! TTTGAATGATAACAACATCA+AGG + chr4_3:65675201-65675220 Msa0656400:CDS 25.0%
!! ATCATTTAGAGTTATCATAG+TGG + chr4_3:65675316-65675335 Msa0656400:intron 25.0%
!!! ATACCTTGCATTTTTTATGA+AGG + chr4_3:65675500-65675519 Msa0656400:intron 25.0%
!! ACTCAAAAGTCTAAAACATA+AGG - chr4_3:65675718-65675737 None:intergenic 25.0%
!! CTCTCAAAAGATTTTACTTA+TGG + chr4_3:65675775-65675794 Msa0656400:intron 25.0%
! ATCATAAAATAGGTGACAAT+AGG - chr4_3:65676159-65676178 None:intergenic 25.0%
! ACATCTCATCATCATAAAAT+AGG - chr4_3:65676169-65676188 None:intergenic 25.0%
! AAATTTATGATAACCATCTC+AGG + chr4_3:65676585-65676604 Msa0656400:intron 25.0%
!!! TTTGACTAAAAGCCATTTTT+AGG + chr4_3:65676680-65676699 Msa0656400:intron 25.0%
!! CACATTTTTGTACAAAAACA+AGG - chr4_3:65676720-65676739 None:intergenic 25.0%
!!! CTTGTTTTTGTACAAAAATG+TGG + chr4_3:65676718-65676737 Msa0656400:intron 25.0%
!! TTGTACAAAAATGTGGTTTT+TGG + chr4_3:65676725-65676744 Msa0656400:intron 25.0%
! TTCATAAATGGATAAATGAC+TGG - chr4_3:65676880-65676899 None:intergenic 25.0%
! TAACAAAACTTTCTCTTGTA+AGG + chr4_3:65676919-65676938 Msa0656400:intron 25.0%
! TCAATCCGTAAATTATACTA+TGG - chr4_3:65677208-65677227 None:intergenic 25.0%
! CTTTGTAGAAACAGAAAATT+TGG - chr4_3:65677527-65677546 None:intergenic 25.0%
!!! CAAATTTTCTGTTTCTACAA+AGG + chr4_3:65677525-65677544 Msa0656400:intron 25.0%
!!! AACTGATTTGTTAATTCAAC+TGG - chr4_3:65677758-65677777 None:intergenic 25.0%
!!! CGTAAATCAGTATTTTTAAC+AGG - chr4_3:65678196-65678215 None:intergenic 25.0%
! TTTCCTTGTCTTAAAATCTT+TGG + chr4_3:65678333-65678352 Msa0656400:intron 25.0%
!!! TCTATTTTGACTTTCTAGTT+TGG + chr4_3:65678687-65678706 Msa0656400:intron 25.0%
!!! CTATTTTGACTTTCTAGTTT+GGG + chr4_3:65678688-65678707 Msa0656400:intron 25.0%
! TGTGAAAAATTCTCAGTTTA+AGG + chr4_3:65678802-65678821 Msa0656400:intron 25.0%
! GTGAAAAATTCTCAGTTTAA+GGG + chr4_3:65678803-65678822 Msa0656400:intron 25.0%
! ATAGAGAAAAAAAGTCTGTT+GGG - chr4_3:65678883-65678902 None:intergenic 25.0%
! CTGAGTAAATATAAGAGAAA+TGG - chr4_3:65679148-65679167 None:intergenic 25.0%
! CATTTCTCTTATATTTACTC+AGG + chr4_3:65679146-65679165 Msa0656400:intron 25.0%
!! TATGAACAGTTTTCCTTTTA+CGG + chr4_3:65679180-65679199 Msa0656400:intron 25.0%
!!! TTTTGTGTGTTATTTTCTCA+TGG + chr4_3:65679320-65679339 Msa0656400:intron 25.0%
! AATCTATGTGATAAGATGAA+CGG + chr4_3:65679405-65679424 Msa0656400:CDS 25.0%
! ATAATATTGGATTACTTTGC+TGG + chr4_3:65679465-65679484 Msa0656400:CDS 25.0%
! AACCTACTTATATGATGATA+AGG + chr4_3:65679692-65679711 Msa0656400:intron 25.0%
! ATCCTTATCATCATATAAGT+AGG - chr4_3:65679697-65679716 None:intergenic 25.0%
!! TTTTACCCCATATTGTATAA+GGG - chr4_3:65679992-65680011 None:intergenic 25.0%
! TTCATACCAACAAGTATTTA+AGG - chr4_3:65680053-65680072 None:intergenic 25.0%
! CTTGTTGGTATGAAATAAAT+TGG + chr4_3:65680059-65680078 Msa0656400:intron 25.0%
!! AAATAAATTGGGTGACTTTT+AGG + chr4_3:65680071-65680090 Msa0656400:intron 25.0%
! TTATTGATGTTATTGATGGA+AGG - chr4_3:65680114-65680133 None:intergenic 25.0%
! TGAAATAGAAAATCTGGAAA+AGG - chr4_3:65680142-65680161 None:intergenic 25.0%
! GTGGAAAAAAATGAAATGAA+TGG - chr4_3:65680214-65680233 None:intergenic 25.0%
! AATTTCAACAGTGAATAACA+TGG - chr4_3:65680558-65680577 None:intergenic 25.0%
!!! TCAAACTGCATTTTTTGGAT+CGG - chr4_3:65672885-65672904 None:intergenic 30.0%
!! TTTTTGTTTGAAACTGGAAG+AGG - chr4_3:65672990-65673009 None:intergenic 30.0%
!! TTTATTGGATTTTGAGGGTT+TGG - chr4_3:65673027-65673046 None:intergenic 30.0%
TTCTTGTTCGGGAATAATTT+CGG - chr4_3:65673066-65673085 None:intergenic 30.0%
!! AATTGATTTGGAGAAGAATC+CGG - chr4_3:65673192-65673211 None:intergenic 30.0%
! GAAGTTTCTAGATTGAGTAA+GGG - chr4_3:65673236-65673255 None:intergenic 30.0%
ACACTAGCACATATCAAATT+AGG - chr4_3:65673317-65673336 None:intergenic 30.0%
TAATTTGATATGTGCTAGTG+TGG + chr4_3:65673316-65673335 Msa0656400:CDS 30.0%
TTTCACAAAATTTCCTTCTC+TGG - chr4_3:65673372-65673391 None:intergenic 30.0%
AATTGAATTTGAATGGGAAG+AGG + chr4_3:65673390-65673409 Msa0656400:CDS 30.0%
AATAAAGGGTGGAAGAAAAA+TGG + chr4_3:65673425-65673444 Msa0656400:CDS 30.0%
!! GAAAATTTGGTAGTGGTAAA+AGG + chr4_3:65673447-65673466 Msa0656400:CDS 30.0%
ATAAAATCGGAACACAAAGA+AGG + chr4_3:65673524-65673543 Msa0656400:CDS 30.0%
TTTCTACAAAAGAAGATCCA+AGG - chr4_3:65674119-65674138 None:intergenic 30.0%
ATCAATAACAACAAGTGAGA+CGG - chr4_3:65674364-65674383 None:intergenic 30.0%
AAGCACATTGTATATCTGAA+TGG + chr4_3:65674385-65674404 Msa0656400:CDS 30.0%
ATTGTATATCTGAATGGTGA+GGG + chr4_3:65674391-65674410 Msa0656400:intron 30.0%
AAATATAAAGATCAACACGG+AGG - chr4_3:65674490-65674509 None:intergenic 30.0%
CTTCATAAGAGTCTTAATGT+AGG + chr4_3:65674570-65674589 Msa0656400:CDS 30.0%
TTATTCTAAATGCGCACTTA+AGG + chr4_3:65674676-65674695 Msa0656400:CDS 30.0%
TATTCTAAATGCGCACTTAA+GGG + chr4_3:65674677-65674696 Msa0656400:CDS 30.0%
CTGCGTCTTTGATAAAAAAT+AGG + chr4_3:65674715-65674734 Msa0656400:intron 30.0%
TTATAGAATGAAAGACCTAC+TGG + chr4_3:65674821-65674840 Msa0656400:intron 30.0%
CATAGTATACTGCAAATTTC+AGG + chr4_3:65674884-65674903 Msa0656400:CDS 30.0%
!!! AATTTTAAGGTATTGGGTCT+CGG + chr4_3:65674930-65674949 Msa0656400:intron 30.0%
GATTTAACATTCAGTGTCAA+GGG - chr4_3:65675279-65675298 None:intergenic 30.0%
AGATTTAACATTCAGTGTCA+AGG - chr4_3:65675280-65675299 None:intergenic 30.0%
! AAAAAATGCAAGGTATCAGT+TGG - chr4_3:65675496-65675515 None:intergenic 30.0%
CAACCTTCATAAAAAATGCA+AGG - chr4_3:65675506-65675525 None:intergenic 30.0%
GTAATTCATTACAGTTTACC+TGG + chr4_3:65675991-65676010 Msa0656400:CDS 30.0%
! TTAAATAGAATGGGCATTGT+AGG + chr4_3:65676100-65676119 Msa0656400:intron 30.0%
TATTTGGTCTCAAGTTAATC+TGG - chr4_3:65676788-65676807 None:intergenic 30.0%
!! AACTGCAACTTAGCTTTATT+TGG - chr4_3:65676804-65676823 None:intergenic 30.0%
TCTCCAATATTTCCTTTACT+AGG + chr4_3:65676999-65677018 Msa0656400:intron 30.0%
TCACCTAGTAAAGGAAATAT+TGG - chr4_3:65677005-65677024 None:intergenic 30.0%
GATATTGTACATGCAATTGA+AGG - chr4_3:65677138-65677157 None:intergenic 30.0%
AGCATACAGTTTAGATAAGT+AGG - chr4_3:65677181-65677200 None:intergenic 30.0%
TTGTTTGAGAGATTATTCAG+TGG + chr4_3:65677296-65677315 Msa0656400:intron 30.0%
TTCAGATCTGAAAATAAGCA+CGG + chr4_3:65677683-65677702 Msa0656400:intron 30.0%
! TACTTTTGATATTCCAACTG+TGG + chr4_3:65677712-65677731 Msa0656400:CDS 30.0%
!!! TTTTTTCTCAAGCTTGTATG+TGG + chr4_3:65677816-65677835 Msa0656400:intron 30.0%
TTCTCTCACACTTCATTATT+GGG - chr4_3:65677921-65677940 None:intergenic 30.0%
TTTCTCTCACACTTCATTAT+TGG - chr4_3:65677922-65677941 None:intergenic 30.0%
!! TGGATAAAGCTATTGATTCA+TGG + chr4_3:65678078-65678097 Msa0656400:intron 30.0%
! TTGATAGTAATTCAAACGAC+AGG + chr4_3:65678121-65678140 Msa0656400:intron 30.0%
TGATAGTAATTCAAACGACA+GGG + chr4_3:65678122-65678141 Msa0656400:intron 30.0%
! ATTTTTAACAGGAGTAGTGA+AGG - chr4_3:65678185-65678204 None:intergenic 30.0%
!!! ATGCCAAAGATTTTAAGACA+AGG - chr4_3:65678339-65678358 None:intergenic 30.0%
CTTAAAATCTTTGGCATCAT+AGG + chr4_3:65678342-65678361 Msa0656400:intron 30.0%
GAAACAGTATAATTGTGTTC+TGG + chr4_3:65678755-65678774 Msa0656400:intron 30.0%
AACTTATGAAATGAAGGACA+TGG + chr4_3:65678832-65678851 Msa0656400:intron 30.0%
GATAGAGAAAAAAAGTCTGT+TGG - chr4_3:65678884-65678903 None:intergenic 30.0%
AGATATTACACGATGGTTAT+CGG + chr4_3:65678907-65678926 Msa0656400:intron 30.0%
TCTAACATTCACTCTCTTAT+TGG + chr4_3:65679010-65679029 Msa0656400:intron 30.0%
GTAAAAGGAAAACTGTTCAT+AGG - chr4_3:65679181-65679200 None:intergenic 30.0%
CAATCTTTGAATACCGTAAA+AGG - chr4_3:65679196-65679215 None:intergenic 30.0%
ATGCTTGCAAAGGATAATAT+TGG + chr4_3:65679452-65679471 Msa0656400:CDS 30.0%
TGTTCTTTAGTACAGAACTT+AGG - chr4_3:65679553-65679572 None:intergenic 30.0%
!!! ATAATTTTGGGGCATAAACT+AGG - chr4_3:65679660-65679679 None:intergenic 30.0%
!!! GCTATTTTAGTACAAGATCA+TGG - chr4_3:65679739-65679758 None:intergenic 30.0%
AACTTGATGCATATCATGTT+TGG + chr4_3:65679839-65679858 Msa0656400:intron 30.0%
! TGAAAATTACCTGTTTCTCT+GGG + chr4_3:65679874-65679893 Msa0656400:intron 30.0%
! GTTTTACCCCATATTGTATA+AGG - chr4_3:65679993-65680012 None:intergenic 30.0%
!! TTTTTCAACGTACCAGAAAT+GGG - chr4_3:65680015-65680034 None:intergenic 30.0%
!! AGCTTTGATTTGAGAAACAA+AGG + chr4_3:65680170-65680189 Msa0656400:intron 30.0%
!! GCTTTGATTTGAGAAACAAA+GGG + chr4_3:65680171-65680190 Msa0656400:intron 30.0%
ATGTTAAACAAAAGTAGGAG+TGG - chr4_3:65680233-65680252 None:intergenic 30.0%
! AGATTTAAATTGTGGATTGC+AGG + chr4_3:65680324-65680343 Msa0656400:intron 30.0%
! GATTTAAATTGTGGATTGCA+GGG + chr4_3:65680325-65680344 Msa0656400:intron 30.0%
! ATTTAAATTGTGGATTGCAG+GGG + chr4_3:65680326-65680345 Msa0656400:intron 30.0%
GTATACCAAGATAGACTTTA+AGG + chr4_3:65680352-65680371 Msa0656400:CDS 30.0%
TATGGGGAAAAATAAAAGAG+AGG - chr4_3:65680786-65680805 None:intergenic 30.0%
! TATACTAACTGTTTTGCACA+TGG - chr4_3:65680898-65680917 None:intergenic 30.0%
TGTGCAAAACAGTTAGTATA+AGG + chr4_3:65680898-65680917 Msa0656400:three_prime_UTR 30.0%
AGAAGAAGAACAAAGGGAAA+GGG - chr4_3:65672862-65672881 None:intergenic 35.0%
!!! CGGAATCAAACTGCATTTTT+TGG - chr4_3:65672890-65672909 None:intergenic 35.0%
! AGGGGTTTATTGGATTTTGA+GGG - chr4_3:65673032-65673051 None:intergenic 35.0%
! AAGGGGTTTATTGGATTTTG+AGG - chr4_3:65673033-65673052 None:intergenic 35.0%
TCTTGTTCGGGAATAATTTC+GGG - chr4_3:65673065-65673084 None:intergenic 35.0%
! GAGTAAGGGTTTACGAATTT+TGG - chr4_3:65673222-65673241 None:intergenic 35.0%
! GGAAGTTTCTAGATTGAGTA+AGG - chr4_3:65673237-65673256 None:intergenic 35.0%
! GTTTTTGCAGAATCAACAAC+CGG - chr4_3:65673269-65673288 None:intergenic 35.0%
AATAGTAATGGCAGCAATAG+TGG + chr4_3:65673479-65673498 Msa0656400:CDS 35.0%
AAGCAACAGGAAAAGAAGAA+TGG + chr4_3:65673593-65673612 Msa0656400:CDS 35.0%
AACAGGAAAAGAAGAATGGT+TGG + chr4_3:65673597-65673616 Msa0656400:CDS 35.0%
ACAGGAAAAGAAGAATGGTT+GGG + chr4_3:65673598-65673617 Msa0656400:CDS 35.0%
GGAAAATGAATGCAAAGTGT+TGG + chr4_3:65673619-65673638 Msa0656400:CDS 35.0%
!! AAATGAATGCAAAGTGTTGG+AGG + chr4_3:65673622-65673641 Msa0656400:CDS 35.0%
TGAAGCTTCTGATGAGAATT+TGG + chr4_3:65673667-65673686 Msa0656400:CDS 35.0%
!!! TGGTTTTGATTCTTTTCGAG+AGG + chr4_3:65673712-65673731 Msa0656400:CDS 35.0%
!!! GGTTTTGATTCTTTTCGAGA+GGG + chr4_3:65673713-65673732 Msa0656400:CDS 35.0%
!!! GTTTTGATTCTTTTCGAGAG+GGG + chr4_3:65673714-65673733 Msa0656400:CDS 35.0%
TCAATCATCAAAGCTACCAA+AGG - chr4_3:65673869-65673888 None:intergenic 35.0%
GAATTTCTGTCTGTTATCTC+TGG + chr4_3:65674330-65674349 Msa0656400:CDS 35.0%
CATTGTATATCTGAATGGTG+AGG + chr4_3:65674390-65674409 Msa0656400:intron 35.0%
! CATAATGGCATCTAAAGTCA+TGG - chr4_3:65674628-65674647 None:intergenic 35.0%
ATTTGTGCAAGGAATATCCA+GGG - chr4_3:65674655-65674674 None:intergenic 35.0%
TCAGATAAGGATAGTTAGAG+GGG - chr4_3:65674780-65674799 None:intergenic 35.0%
CTCAGATAAGGATAGTTAGA+GGG - chr4_3:65674781-65674800 None:intergenic 35.0%
ACTCAGATAAGGATAGTTAG+AGG - chr4_3:65674782-65674801 None:intergenic 35.0%
! TATGAAGTCTTCTCCTTTTG+CGG + chr4_3:65674848-65674867 Msa0656400:CDS 35.0%
!!! ATGCTTTTAACTTCCGCAAA+AGG - chr4_3:65674864-65674883 None:intergenic 35.0%
!! TGTGTTTCAGGTTTAGTATG+TGG + chr4_3:65675052-65675071 Msa0656400:intron 35.0%
TGATAACAACATCAAGGCAA+AGG + chr4_3:65675207-65675226 Msa0656400:CDS 35.0%
! TCATAGTGGTATTTCTGCAA+AGG + chr4_3:65675330-65675349 Msa0656400:CDS 35.0%
GGACTAGATAAAAGAGATGT+TGG + chr4_3:65675549-65675568 Msa0656400:CDS 35.0%
!! CTGCATTAATTTGCATGAAC+TGG + chr4_3:65675602-65675621 Msa0656400:intron 35.0%
!! AGTGATTCACCGATTCTAAT+TGG + chr4_3:65675658-65675677 Msa0656400:intron 35.0%
!! GTGATTCACCGATTCTAATT+GGG + chr4_3:65675659-65675678 Msa0656400:intron 35.0%
AACTAGAGCCCAATTAGAAT+CGG - chr4_3:65675670-65675689 None:intergenic 35.0%
! AGTCTAAAACATAAGGCACA+AGG - chr4_3:65675711-65675730 None:intergenic 35.0%
AATTGCAAAATGGGGGTAAA+TGG + chr4_3:65675810-65675829 Msa0656400:intron 35.0%
AAAATGGGGGTAAATGGTAT+TGG + chr4_3:65675816-65675835 Msa0656400:intron 35.0%
TTCGCACTACTTATTTGCTT+TGG + chr4_3:65675905-65675924 Msa0656400:intron 35.0%
CCTAAACACAGTTATGACAA+TGG - chr4_3:65675972-65675991 None:intergenic 35.0%
CCATTGTCATAACTGTGTTT+AGG + chr4_3:65675969-65675988 Msa0656400:intron 35.0%
AACTTCGTAGTCTAATGTAC+AGG + chr4_3:65676195-65676214 Msa0656400:CDS 35.0%
! TAACGAACATATTTTCCCAC+AGG - chr4_3:65676372-65676391 None:intergenic 35.0%
CAGGTTTGATATGAAAGAAG+AGG + chr4_3:65676412-65676431 Msa0656400:CDS 35.0%
ACTTTGATAAACCAGATGAG+TGG + chr4_3:65676479-65676498 Msa0656400:intron 35.0%
AGACTTTCATAACATCCTGT+TGG + chr4_3:65676518-65676537 Msa0656400:intron 35.0%
GACTTTCATAACATCCTGTT+GGG + chr4_3:65676519-65676538 Msa0656400:intron 35.0%
!! AATCTTTAAAGCTCCTGAGA+TGG - chr4_3:65676601-65676620 None:intergenic 35.0%
!!! TGGGTTTTAAGCACTAAACA+AGG - chr4_3:65676762-65676781 None:intergenic 35.0%
TCTCAAGTTAATCTGGACAT+GGG - chr4_3:65676781-65676800 None:intergenic 35.0%
AAAGCTAAGTTGCAGTTTCT+AGG + chr4_3:65676807-65676826 Msa0656400:intron 35.0%
ATGGACAACCATCTACTTAT+AGG + chr4_3:65676852-65676871 Msa0656400:intron 35.0%
TTTAATCTGTAGACCTAGTC+TGG - chr4_3:65676974-65676993 None:intergenic 35.0%
!! GTGTGTTCTGAGTTTTCATA+TGG + chr4_3:65677098-65677117 Msa0656400:CDS 35.0%
! AGCAATAGCAGAAACCTTTT+GGG - chr4_3:65677372-65677391 None:intergenic 35.0%
! CTATTGCTGTGATTCTGAAA+AGG + chr4_3:65677384-65677403 Msa0656400:CDS 35.0%
ACAATAACCATCCATTTCAG+GGG - chr4_3:65677459-65677478 None:intergenic 35.0%
CACAATAACCATCCATTTCA+GGG - chr4_3:65677460-65677479 None:intergenic 35.0%
ACACAATAACCATCCATTTC+AGG - chr4_3:65677461-65677480 None:intergenic 35.0%
TAATGTTGTCAACCTCAAGA+TGG + chr4_3:65677493-65677512 Msa0656400:intron 35.0%
!! GAAGAAAAAGTGCCATTAGA+CGG - chr4_3:65677560-65677579 None:intergenic 35.0%
ATTCTAGTGTGATCACGATA+AGG - chr4_3:65677602-65677621 None:intergenic 35.0%
AAATCAGTTGTATGCCCTAA+AGG + chr4_3:65677769-65677788 Msa0656400:CDS 35.0%
TCGACTAATCCAAACCTTTA+GGG - chr4_3:65677786-65677805 None:intergenic 35.0%
ATCGACTAATCCAAACCTTT+AGG - chr4_3:65677787-65677806 None:intergenic 35.0%
GAATCTGCTAAACTATCTTC+AGG - chr4_3:65677987-65678006 None:intergenic 35.0%
GATAGTAATTCAAACGACAG+GGG + chr4_3:65678123-65678142 Msa0656400:intron 35.0%
ATTTGATGCAGGGTAACAAA+GGG - chr4_3:65678152-65678171 None:intergenic 35.0%
CTAATCAGAGATTTGATGCA+GGG - chr4_3:65678162-65678181 None:intergenic 35.0%
ACACACAAACACTACATACT+TGG - chr4_3:65678417-65678436 None:intergenic 35.0%
ATTGAGTTAGAACCTTGCAA+AGG + chr4_3:65678445-65678464 Msa0656400:intron 35.0%
TTGAGTTAGAACCTTGCAAA+GGG + chr4_3:65678446-65678465 Msa0656400:intron 35.0%
AAAAAATATCTCGCACTGCA+AGG - chr4_3:65678655-65678674 None:intergenic 35.0%
TTCCAGAATCCTATAACAGT+AGG - chr4_3:65678858-65678877 None:intergenic 35.0%
TATCAGCAGATATTACACGA+TGG + chr4_3:65678900-65678919 Msa0656400:intron 35.0%
ATCGGAAGTTGAAAGTTGTA+AGG + chr4_3:65678925-65678944 Msa0656400:intron 35.0%
!! TTATATTTAGAGGAGTGCTG+TGG + chr4_3:65678969-65678988 Msa0656400:intron 35.0%
TTATATGGGATCCATTTCCA+AGG - chr4_3:65679061-65679080 None:intergenic 35.0%
GAAATGGATCCCATATAAAG+TGG + chr4_3:65679063-65679082 Msa0656400:intron 35.0%
TGGATCTCACCACTTTATAT+GGG - chr4_3:65679075-65679094 None:intergenic 35.0%
TCTGTATCAGGAACTATAAC+CGG + chr4_3:65679279-65679298 Msa0656400:intron 35.0%
AATGCAATGAATTATCCACC+CGG - chr4_3:65679301-65679320 None:intergenic 35.0%
TCTTGTGTAGGTACGAAAAA+TGG + chr4_3:65679350-65679369 Msa0656400:intron 35.0%
GCAAGAAAATTGATCAAAGC+AGG + chr4_3:65679508-65679527 Msa0656400:CDS 35.0%
TTAGGTGACAGAAACTAGTA+AGG - chr4_3:65679535-65679554 None:intergenic 35.0%
ATGCATATCATGTTTGGAAG+AGG + chr4_3:65679845-65679864 Msa0656400:intron 35.0%
! CTGAAAATTACCTGTTTCTC+TGG + chr4_3:65679873-65679892 Msa0656400:intron 35.0%
! GAAAATTACCTGTTTCTCTG+GGG + chr4_3:65679875-65679894 Msa0656400:intron 35.0%
AATTGCTCTGTAGAAAAACC+TGG - chr4_3:65679905-65679924 None:intergenic 35.0%
ATATTGTATAAGGGTAGGCT+GGG - chr4_3:65679983-65680002 None:intergenic 35.0%
AGCCTACCCTTATACAATAT+GGG + chr4_3:65679983-65680002 Msa0656400:CDS 35.0%
!! GTTTTTCAACGTACCAGAAA+TGG - chr4_3:65680016-65680035 None:intergenic 35.0%
CCAACAAGTATTTAAGGACA+TGG - chr4_3:65680047-65680066 None:intergenic 35.0%
CCATGTCCTTAAATACTTGT+TGG + chr4_3:65680044-65680063 Msa0656400:intron 35.0%
! TTGATTTGAGAAACAAAGGG+AGG + chr4_3:65680174-65680193 Msa0656400:intron 35.0%
! TACCAAGATAGACTTTAAGG+TGG + chr4_3:65680355-65680374 Msa0656400:CDS 35.0%
ACAGATGTCTTTACTGGTAA+GGG - chr4_3:65680476-65680495 None:intergenic 35.0%
!! AGGGATTAGTTTCTACAACA+AGG - chr4_3:65680720-65680739 None:intergenic 35.0%
GAGAAGAAGAACAAAGGGAA+AGG - chr4_3:65672863-65672882 None:intergenic 40.0%
GATCGGAGAAGAAGAACAAA+GGG - chr4_3:65672868-65672887 None:intergenic 40.0%
TGAAGAAATGTGAGATCCGT+CGG - chr4_3:65672922-65672941 None:intergenic 40.0%
! TTGTTTGAAACTGGAAGAGG+TGG - chr4_3:65672987-65673006 None:intergenic 40.0%
!! GGATTTTGAGGGTTTGGTTT+TGG - chr4_3:65673021-65673040 None:intergenic 40.0%
TTGTTCGGGAATAATTTCGG+GGG - chr4_3:65673063-65673082 None:intergenic 40.0%
CTTGTTCGGGAATAATTTCG+GGG - chr4_3:65673064-65673083 None:intergenic 40.0%
AAGGGGAAAGATTCTTGTTC+GGG - chr4_3:65673077-65673096 None:intergenic 40.0%
GAAGGGGAAAGATTCTTGTT+CGG - chr4_3:65673078-65673097 None:intergenic 40.0%
GAGTGAGAAGATGAAGTTGA+AGG - chr4_3:65673152-65673171 None:intergenic 40.0%
! CCTTTTAGTGCCTTGACTAT+CGG - chr4_3:65673347-65673366 None:intergenic 40.0%
TGTTGAGAATGCAAAGCAAC+AGG + chr4_3:65673580-65673599 Msa0656400:CDS 40.0%
CGATTAAGAATGTGCTTGCT+GGG + chr4_3:65673747-65673766 Msa0656400:CDS 40.0%
!! TACGCTTGTTGTTAGTCCTT+TGG + chr4_3:65673850-65673869 Msa0656400:CDS 40.0%
!!! CAGTGCTCAGGTTGATTTTA+CGG + chr4_3:65673934-65673953 Msa0656400:intron 40.0%
AACTGAATTCAGCTTTGCCT+TGG + chr4_3:65674099-65674118 Msa0656400:intron 40.0%
TCTTCATTCAAGAATCGCTC+TGG - chr4_3:65674312-65674331 None:intergenic 40.0%
TTTCTGTCTGTTATCTCTGG+TGG + chr4_3:65674333-65674352 Msa0656400:CDS 40.0%
TTCTGTCTGTTATCTCTGGT+GGG + chr4_3:65674334-65674353 Msa0656400:CDS 40.0%
TGAGTCTCATGAATGAAGGT+CGG - chr4_3:65674539-65674558 None:intergenic 40.0%
AATATCCAGGGCAGACATAA+TGG - chr4_3:65674643-65674662 None:intergenic 40.0%
GATTTGTGCAAGGAATATCC+AGG - chr4_3:65674656-65674675 None:intergenic 40.0%
AAGACTTCATAAGCACCAGT+AGG - chr4_3:65674839-65674858 None:intergenic 40.0%
! GCAAATTTCAGGTGCGTATA+TGG + chr4_3:65674895-65674914 Msa0656400:intron 40.0%
AGTGATGTTGTATTCTGCAG+TGG + chr4_3:65675093-65675112 Msa0656400:intron 40.0%
TGGTTCAAACAAGATCAGAG+TGG + chr4_3:65675378-65675397 Msa0656400:CDS 40.0%
TGCGTCTAATACAACATTGC+TGG + chr4_3:65675438-65675457 Msa0656400:intron 40.0%
GCGTCTAATACAACATTGCT+GGG + chr4_3:65675439-65675458 Msa0656400:intron 40.0%
TATGAAGGTTGTTGCAACTG+TGG + chr4_3:65675515-65675534 Msa0656400:intron 40.0%
AAAGAGATGTTGGAGCAGTA+AGG + chr4_3:65675559-65675578 Msa0656400:intron 40.0%
ACATAAGGCACAAGGAAAAG+TGG - chr4_3:65675703-65675722 None:intergenic 40.0%
GGAGAATTGAGCTCTTTACT+TGG + chr4_3:65675837-65675856 Msa0656400:intron 40.0%
TTACAGTTTACCTGGAAGTC+TGG + chr4_3:65675999-65676018 Msa0656400:CDS 40.0%
! AAGTCTGGAAGAGTATGTAC+AGG + chr4_3:65676014-65676033 Msa0656400:CDS 40.0%
! CAATTTTTCATCCGCAGTGA+AGG + chr4_3:65676287-65676306 Msa0656400:intron 40.0%
!! ATTCATCGATTCCTTCACTG+CGG - chr4_3:65676301-65676320 None:intergenic 40.0%
GTAACTGAAAACCACTCATC+TGG - chr4_3:65676493-65676512 None:intergenic 40.0%
TCACCATCAATGTATCAGCA+TGG - chr4_3:65676551-65676570 None:intergenic 40.0%
!! TGCTGATACATTGATGGTGA+AGG + chr4_3:65676551-65676570 Msa0656400:intron 40.0%
!! GCTGATACATTGATGGTGAA+GGG + chr4_3:65676552-65676571 Msa0656400:intron 40.0%
!! CTGATACATTGATGGTGAAG+GGG + chr4_3:65676553-65676572 Msa0656400:intron 40.0%
!! TGATACATTGATGGTGAAGG+GGG + chr4_3:65676554-65676573 Msa0656400:intron 40.0%
GTCTCAAGTTAATCTGGACA+TGG - chr4_3:65676782-65676801 None:intergenic 40.0%
CTGTGAGAATCACCTAGTAA+AGG - chr4_3:65677014-65677033 None:intergenic 40.0%
! CAGCAATAGCAGAAACCTTT+TGG - chr4_3:65677373-65677392 None:intergenic 40.0%
! CAAACCATTTTCCCCTGAAA+TGG + chr4_3:65677445-65677464 Msa0656400:intron 40.0%
TTGGATCAGATTCCATCTTG+AGG - chr4_3:65677508-65677527 None:intergenic 40.0%
GATCTGAAAACACGTAACGA+TGG - chr4_3:65677671-65677690 None:intergenic 40.0%
AGTTGTATGCCCTAAAGGTT+TGG + chr4_3:65677774-65677793 Msa0656400:intron 40.0%
!! GGTTTGGATTAGTCGATAAC+TGG + chr4_3:65677790-65677809 Msa0656400:intron 40.0%
GATTTGATGCAGGGTAACAA+AGG - chr4_3:65678153-65678172 None:intergenic 40.0%
GCTAATCAGAGATTTGATGC+AGG - chr4_3:65678163-65678182 None:intergenic 40.0%
AGCCATAAATACTTGCAGCA+TGG + chr4_3:65678266-65678285 Msa0656400:intron 40.0%
AGCCATGCTGCAAGTATTTA+TGG - chr4_3:65678271-65678290 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG - chr4_3:65678520-65678539 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG - chr4_3:65678546-65678565 None:intergenic 40.0%
! CTTACCCTGTTTTACACAAG+AGG + chr4_3:65678544-65678563 Msa0656400:intron 40.0%
ACAGCCTCTTGTGTAAAACA+GGG - chr4_3:65678551-65678570 None:intergenic 40.0%
AACAGCCTCTTGTGTAAAAC+AGG - chr4_3:65678552-65678571 None:intergenic 40.0%
GTTGTTGTCATGTGACTGAA+AGG - chr4_3:65678595-65678614 None:intergenic 40.0%
! ACTGCAAGGTTCTAACATGA+GGG - chr4_3:65678641-65678660 None:intergenic 40.0%
GTTTCCGATACCATACACAA+GGG - chr4_3:65678740-65678759 None:intergenic 40.0%
TGTTTCCGATACCATACACA+AGG - chr4_3:65678741-65678760 None:intergenic 40.0%
GTGGATCTCACCACTTTATA+TGG - chr4_3:65679076-65679095 None:intergenic 40.0%
ATAAAGTGGTGAGATCCACA+TGG + chr4_3:65679077-65679096 Msa0656400:intron 40.0%
TAAAGTGGTGAGATCCACAT+GGG + chr4_3:65679078-65679097 Msa0656400:intron 40.0%
TTTATTGGGTGAAACCCATG+TGG - chr4_3:65679095-65679114 None:intergenic 40.0%
ACATGGGTTTCACCCAATAA+AGG + chr4_3:65679094-65679113 Msa0656400:intron 40.0%
GTTTCACCCAATAAAGGAGT+GGG + chr4_3:65679100-65679119 Msa0656400:intron 40.0%
CTAACACCCACTCCTTTATT+GGG - chr4_3:65679109-65679128 None:intergenic 40.0%
TCTAACACCCACTCCTTTAT+TGG - chr4_3:65679110-65679129 None:intergenic 40.0%
ATAAGTCCTGACTCTGTATC+AGG + chr4_3:65679267-65679286 Msa0656400:intron 40.0%
ATAGTTCCTGATACAGAGTC+AGG - chr4_3:65679276-65679295 None:intergenic 40.0%
CTGTATCAGGAACTATAACC+GGG + chr4_3:65679280-65679299 Msa0656400:intron 40.0%
TTTCGTACCTACACAAGAAG+CGG - chr4_3:65679348-65679367 None:intergenic 40.0%
ATCACACTTCATGCTTGCAA+AGG + chr4_3:65679442-65679461 Msa0656400:CDS 40.0%
ATAAAGGTGAGTCGTTACAC+AGG + chr4_3:65679796-65679815 Msa0656400:intron 40.0%
CATATTGTATAAGGGTAGGC+TGG - chr4_3:65679984-65680003 None:intergenic 40.0%
CAGCCTACCCTTATACAATA+TGG + chr4_3:65679982-65680001 Msa0656400:CDS 40.0%
GCCTACCCTTATACAATATG+GGG + chr4_3:65679984-65680003 Msa0656400:CDS 40.0%
ACCCCATATTGTATAAGGGT+AGG - chr4_3:65679988-65680007 None:intergenic 40.0%
TATGGGGTAAAACCCATTTC+TGG + chr4_3:65680000-65680019 Msa0656400:CDS 40.0%
CACCACCTTAAAGTCTATCT+TGG - chr4_3:65680360-65680379 None:intergenic 40.0%
!! GATAGACTTTAAGGTGGTGA+TGG + chr4_3:65680361-65680380 Msa0656400:CDS 40.0%
CACAGATGTCTTTACTGGTA+AGG - chr4_3:65680477-65680496 None:intergenic 40.0%
CAATGCACAGATGTCTTTAC+TGG - chr4_3:65680482-65680501 None:intergenic 40.0%
!! GACATCTGTGCATTGATTGA+AGG + chr4_3:65680487-65680506 Msa0656400:three_prime_UTR 40.0%
!! ATCTGTGCATTGATTGAAGG+TGG + chr4_3:65680490-65680509 Msa0656400:three_prime_UTR 40.0%
!! TCTGTGCATTGATTGAAGGT+GGG + chr4_3:65680491-65680510 Msa0656400:three_prime_UTR 40.0%
! TACTTTTGCTTGTCTTGACC+TGG - chr4_3:65680606-65680625 None:intergenic 40.0%
CTAGGTCGCACATATAATGA+GGG - chr4_3:65680643-65680662 None:intergenic 40.0%
TCTAGGTCGCACATATAATG+AGG - chr4_3:65680644-65680663 None:intergenic 40.0%
CATTATATGTGCGACCTAGA+TGG + chr4_3:65680644-65680663 Msa0656400:three_prime_UTR 40.0%
ATCCTTGATTCCTTCCATCT+AGG - chr4_3:65680661-65680680 None:intergenic 40.0%
GTTGTAGAAACTAATCCCTC+AGG + chr4_3:65680721-65680740 Msa0656400:three_prime_UTR 40.0%
AACTAATCCCTCAGGTCAAA+AGG + chr4_3:65680729-65680748 Msa0656400:three_prime_UTR 40.0%
! ACCTTTTCCTTTTGACCTGA+GGG - chr4_3:65680739-65680758 None:intergenic 40.0%
! AACCTTTTCCTTTTGACCTG+AGG - chr4_3:65680740-65680759 None:intergenic 40.0%
AGAAGAACAAAGGGAAAGGG+TGG - chr4_3:65672859-65672878 None:intergenic 45.0%
GGATCGGAGAAGAAGAACAA+AGG - chr4_3:65672869-65672888 None:intergenic 45.0%
GAACTTGGTTGTTGTCTTGG+CGG - chr4_3:65672948-65672967 None:intergenic 45.0%
GGTGAACTTGGTTGTTGTCT+TGG - chr4_3:65672951-65672970 None:intergenic 45.0%
! GAAACTGGAAGAGGTGGTTT+TGG - chr4_3:65672981-65673000 None:intergenic 45.0%
GGGTTTAGGAAGGGGTTTAT+TGG - chr4_3:65673042-65673061 None:intergenic 45.0%
AATTTCGGGGGGTTTAGGAA+GGG - chr4_3:65673051-65673070 None:intergenic 45.0%
TAATTTCGGGGGGTTTAGGA+AGG - chr4_3:65673052-65673071 None:intergenic 45.0%
GGAATAATTTCGGGGGGTTT+AGG - chr4_3:65673056-65673075 None:intergenic 45.0%
TGTTCGGGAATAATTTCGGG+GGG - chr4_3:65673062-65673081 None:intergenic 45.0%
GGATGTTGAAAGGAAGTGAG+GGG - chr4_3:65673109-65673128 None:intergenic 45.0%
CGGATGTTGAAAGGAAGTGA+GGG - chr4_3:65673110-65673129 None:intergenic 45.0%
TCGGATGTTGAAAGGAAGTG+AGG - chr4_3:65673111-65673130 None:intergenic 45.0%
GTTCGTTGTCGGATGTTGAA+AGG - chr4_3:65673119-65673138 None:intergenic 45.0%
ATTTGGAGAAGAATCCGGCA+GGG - chr4_3:65673187-65673206 None:intergenic 45.0%
TGCAGAATCAACAACCGGTT+CGG - chr4_3:65673264-65673283 None:intergenic 45.0%
! CCGATAGTCAAGGCACTAAA+AGG + chr4_3:65673344-65673363 Msa0656400:CDS 45.0%
! AGAAGGCGATGATGATGATG+AGG + chr4_3:65673541-65673560 Msa0656400:CDS 45.0%
!! TGAATGCAAAGTGTTGGAGG+AGG + chr4_3:65673625-65673644 Msa0656400:CDS 45.0%
GCGATTAAGAATGTGCTTGC+TGG + chr4_3:65673746-65673765 Msa0656400:CDS 45.0%
!!! GACGATGCTTATTTTGCCGA+CGG + chr4_3:65673775-65673794 Msa0656400:CDS 45.0%
!!! ACGATGCTTATTTTGCCGAC+GGG + chr4_3:65673776-65673795 Msa0656400:CDS 45.0%
!!! TTGAGTGCGTTGATTTTGCC+TGG + chr4_3:65673824-65673843 Msa0656400:CDS 45.0%
!!! TGAGTGCGTTGATTTTGCCT+GGG + chr4_3:65673825-65673844 Msa0656400:CDS 45.0%
CTAACAACAAGCGTAATCCC+AGG - chr4_3:65673845-65673864 None:intergenic 45.0%
ACAATTGCCTCCGCTCATTT+CGG + chr4_3:65673898-65673917 Msa0656400:CDS 45.0%
AAGCTGGTTGAGTGTTTCAG+AGG - chr4_3:65674047-65674066 None:intergenic 45.0%
TTATTGTGCCTTGACGAAGC+TGG - chr4_3:65674063-65674082 None:intergenic 45.0%
GCTTCGTCAAGGCACAATAA+AGG + chr4_3:65674063-65674082 Msa0656400:CDS 45.0%
! GCTCTGAGTCTCATGAATGA+AGG - chr4_3:65674543-65674562 None:intergenic 45.0%
! GGTATTTCTGCAAAGGAACG+TGG + chr4_3:65675337-65675356 Msa0656400:CDS 45.0%
GTTGTTGCAACTGTGGCATT+TGG + chr4_3:65675522-65675541 Msa0656400:CDS 45.0%
! CTAATTGGGCTCTAGTTGCA+TGG + chr4_3:65675673-65675692 Msa0656400:intron 45.0%
ACATACTCTTCCAGACTTCC+AGG - chr4_3:65676012-65676031 None:intergenic 45.0%
! GAATGGGCATTGTAGGAGAT+AGG + chr4_3:65676107-65676126 Msa0656400:intron 45.0%
ATATCAAACCTGCGTGAAGC+AGG - chr4_3:65676404-65676423 None:intergenic 45.0%
CATAACATCCTGTTGGGAGT+TGG + chr4_3:65676525-65676544 Msa0656400:intron 45.0%
TGGCCATGCTGATACATTGA+TGG + chr4_3:65676545-65676564 Msa0656400:intron 45.0%
GACTGGTGCCTATAAGTAGA+TGG - chr4_3:65676863-65676882 None:intergenic 45.0%
! CGTGTTACCTTTTCCAGACT+AGG + chr4_3:65676958-65676977 Msa0656400:intron 45.0%
CTGTAGACCTAGTCTGGAAA+AGG - chr4_3:65676968-65676987 None:intergenic 45.0%
!! TCTCACAGTTTTGACACGCT+TGG + chr4_3:65677026-65677045 Msa0656400:CDS 45.0%
ACACACGTTGCATTTGTCTG+TGG - chr4_3:65677084-65677103 None:intergenic 45.0%
TTTGGCACTAATGCAGACTC+CGG + chr4_3:65677334-65677353 Msa0656400:intron 45.0%
! AGCAGAAACCTTTTGGGCAA+GGG - chr4_3:65677366-65677385 None:intergenic 45.0%
! TAGCAGAAACCTTTTGGGCA+AGG - chr4_3:65677367-65677386 None:intergenic 45.0%
CCATCCATTTCAGGGGAAAA+TGG - chr4_3:65677452-65677471 None:intergenic 45.0%
! CCATTTTCCCCTGAAATGGA+TGG + chr4_3:65677449-65677468 Msa0656400:intron 45.0%
TCCAACTGTGGCAAATGACA+TGG + chr4_3:65677724-65677743 Msa0656400:CDS 45.0%
CCAACTGTGGCAAATGACAT+GGG + chr4_3:65677725-65677744 Msa0656400:CDS 45.0%
CAACTGTGGCAAATGACATG+GGG + chr4_3:65677726-65677745 Msa0656400:CDS 45.0%
AACTGTGGCAAATGACATGG+GGG + chr4_3:65677727-65677746 Msa0656400:CDS 45.0%
! ATCCAGCTTGTTTAAGCGCA+TGG + chr4_3:65677946-65677965 Msa0656400:intron 45.0%
AACCATGCGCTTAAACAAGC+TGG - chr4_3:65677951-65677970 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - chr4_3:65678521-65678540 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr4_3:65678524-65678543 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr4_3:65678555-65678574 Msa0656400:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG - chr4_3:65678588-65678607 None:intergenic 45.0%
GTCATGTGACTGAAAGGTCA+CGG - chr4_3:65678589-65678608 None:intergenic 45.0%
TCTAACATGAGGGGTAACCT+TGG - chr4_3:65678631-65678650 None:intergenic 45.0%
! CTGCAAGGTTCTAACATGAG+GGG - chr4_3:65678640-65678659 None:intergenic 45.0%
! CACTGCAAGGTTCTAACATG+AGG - chr4_3:65678642-65678661 None:intergenic 45.0%
!! ACTTTCTAGTTTGGGACACC+TGG + chr4_3:65678696-65678715 Msa0656400:intron 45.0%
TCTGCCCTTGTGTATGGTAT+CGG + chr4_3:65678733-65678752 Msa0656400:intron 45.0%
AGGACATGGCCTACTGTTAT+AGG + chr4_3:65678846-65678865 Msa0656400:intron 45.0%
GGCCTACTGTTATAGGATTC+TGG + chr4_3:65678853-65678872 Msa0656400:intron 45.0%
GGTTTCACCCAATAAAGGAG+TGG + chr4_3:65679099-65679118 Msa0656400:intron 45.0%
TATCAGGAACTATAACCGGG+TGG + chr4_3:65679283-65679302 Msa0656400:intron 45.0%
TTTCCTGCGGGCAGATATAA+AGG + chr4_3:65679780-65679799 Msa0656400:CDS 45.0%
! AAATTGTGGATTGCAGGGGA+AGG + chr4_3:65680330-65680349 Msa0656400:intron 45.0%
!! TAAGGGACTCGGTGCAAATT+TGG - chr4_3:65680459-65680478 None:intergenic 45.0%
GTCTTTACTGGTAAGGGACT+CGG - chr4_3:65680470-65680489 None:intergenic 45.0%
!! CTGTGCATTGATTGAAGGTG+GGG + chr4_3:65680492-65680511 Msa0656400:three_prime_UTR 45.0%
ATATGTGCGACCTAGATGGA+AGG + chr4_3:65680648-65680667 Msa0656400:three_prime_UTR 45.0%
GACCTAGATGGAAGGAATCA+AGG + chr4_3:65680656-65680675 Msa0656400:three_prime_UTR 45.0%
TCCCTCAGGTCAAAAGGAAA+AGG + chr4_3:65680735-65680754 Msa0656400:three_prime_UTR 45.0%
GATTCCGATTCAGACTCCGA+CGG + chr4_3:65672903-65672922 Msa0656400:CDS 50.0%
AGATCCGTCGGAGTCTGAAT+CGG - chr4_3:65672910-65672929 None:intergenic 50.0%
! TTTGGCGGTGATGGTGAACT+TGG - chr4_3:65672963-65672982 None:intergenic 50.0%
!!! ACTGGAAGAGGTGGTTTTGG+CGG - chr4_3:65672978-65672997 None:intergenic 50.0%
ATTTCGGGGGGTTTAGGAAG+GGG - chr4_3:65673050-65673069 None:intergenic 50.0%
AAGGAAGTGAGGGGATGGAA+GGG - chr4_3:65673100-65673119 None:intergenic 50.0%
AAAGGAAGTGAGGGGATGGA+AGG - chr4_3:65673101-65673120 None:intergenic 50.0%
GTTGAAAGGAAGTGAGGGGA+TGG - chr4_3:65673105-65673124 None:intergenic 50.0%
GATTTGGAGAAGAATCCGGC+AGG - chr4_3:65673188-65673207 None:intergenic 50.0%
AGAAACTTCCGAAGCCGAAC+CGG + chr4_3:65673247-65673266 Msa0656400:CDS 50.0%
!! ATCAACAACCGGTTCGGCTT+CGG - chr4_3:65673258-65673277 None:intergenic 50.0%
! TGTGGTAACGCCGATAGTCA+AGG + chr4_3:65673334-65673353 Msa0656400:CDS 50.0%
! AGGCGATGATGATGATGAGG+AGG + chr4_3:65673544-65673563 Msa0656400:CDS 50.0%
! CGATGATGATGATGAGGAGG+AGG + chr4_3:65673547-65673566 Msa0656400:CDS 50.0%
! GATGATGATGAGGAGGAGGA+TGG + chr4_3:65673551-65673570 Msa0656400:CDS 50.0%
TGATGAGGAGGAGGATGGTA+TGG + chr4_3:65673556-65673575 Msa0656400:CDS 50.0%
GATGAGGAGGAGGATGGTAT+GGG + chr4_3:65673557-65673576 Msa0656400:CDS 50.0%
!! TTATTTTGCCGACGGGTGCT+GGG + chr4_3:65673783-65673802 Msa0656400:CDS 50.0%
CAATTGCCTCCGCTCATTTC+GGG + chr4_3:65673899-65673918 Msa0656400:CDS 50.0%
ACACTCAACCAGCTTCGTCA+AGG + chr4_3:65674052-65674071 Msa0656400:CDS 50.0%
AGATGCCATTATGTCTGCCC+TGG + chr4_3:65674635-65674654 Msa0656400:CDS 50.0%
AAAGGAACGTGGCTACGTAC+AGG + chr4_3:65675348-65675367 Msa0656400:CDS 50.0%
GGCTACGTACAGGAGTTGTT+TGG + chr4_3:65675358-65675377 Msa0656400:CDS 50.0%
TGCAACTGTGGCATTTGGCA+TGG + chr4_3:65675527-65675546 Msa0656400:CDS 50.0%
GCAACTGTGGCATTTGGCAT+GGG + chr4_3:65675528-65675547 Msa0656400:CDS 50.0%
TTGTAGGAGATAGGACGTGC+CGG + chr4_3:65676116-65676135 Msa0656400:intron 50.0%
CTGCTGACAAAAGCTCCTGT+GGG + chr4_3:65676354-65676373 Msa0656400:CDS 50.0%
TCAAAGAACCTGCTTCACGC+AGG + chr4_3:65676393-65676412 Msa0656400:CDS 50.0%
!! AGTTTTGACACGCTTGGAGC+TGG + chr4_3:65677032-65677051 Msa0656400:CDS 50.0%
!! GTTTTGACACGCTTGGAGCT+GGG + chr4_3:65677033-65677052 Msa0656400:CDS 50.0%
AGGGAACGCATACCGTCTAA+TGG + chr4_3:65677545-65677564 Msa0656400:intron 50.0%
! CCCATGTCATTTGCCACAGT+TGG - chr4_3:65677728-65677747 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG + chr4_3:65678611-65678630 Msa0656400:intron 50.0%
! TTTGGGACACCTGGCCAATT+TGG + chr4_3:65678705-65678724 Msa0656400:intron 50.0%
AAGGGCAGAGTAGGCCAAAT+TGG - chr4_3:65678722-65678741 None:intergenic 50.0%
ACCATACACAAGGGCAGAGT+AGG - chr4_3:65678731-65678750 None:intergenic 50.0%
TGAGTCCCACACCTTGGAAA+TGG + chr4_3:65679047-65679066 Msa0656400:intron 50.0%
GGGATCCATTTCCAAGGTGT+GGG - chr4_3:65679055-65679074 None:intergenic 50.0%
TGGGATCCATTTCCAAGGTG+TGG - chr4_3:65679056-65679075 None:intergenic 50.0%
CATGGTTCCGCTTCTTGTGT+AGG + chr4_3:65679338-65679357 Msa0656400:intron 50.0%
ACATACGCAGTCGTTTCCTG+CGG + chr4_3:65679767-65679786 Msa0656400:intron 50.0%
TCACCTTTATATCTGCCCGC+AGG - chr4_3:65679786-65679805 None:intergenic 50.0%
CTGGTAATCCCCAGAGAAAC+AGG - chr4_3:65679886-65679905 None:intergenic 50.0%
! CTGTTTCTCTGGGGATTACC+AGG + chr4_3:65679884-65679903 Msa0656400:intron 50.0%
TTACACCAAGAGCTGTTGCG+AGG + chr4_3:65679937-65679956 Msa0656400:CDS 50.0%
TACACCAAGAGCTGTTGCGA+GGG + chr4_3:65679938-65679957 Msa0656400:CDS 50.0%
ATTACCCTCGCAACAGCTCT+TGG - chr4_3:65679945-65679964 None:intergenic 50.0%
! CTCGGTGCAAATTTGGCAGA+TGG - chr4_3:65680452-65680471 None:intergenic 50.0%
!! TGCATTGATTGAAGGTGGGG+CGG + chr4_3:65680495-65680514 Msa0656400:three_prime_UTR 50.0%
CTTGACCTGGAGTAACAGAC+AGG - chr4_3:65680593-65680612 None:intergenic 50.0%
!!! AGAGGTGGTTTTGGCGGTGA+TGG - chr4_3:65672972-65672991 None:intergenic 55.0%
AGTGAGGGGATGGAAGGGAA+GGG - chr4_3:65673095-65673114 None:intergenic 55.0%
AAGTGAGGGGATGGAAGGGA+AGG - chr4_3:65673096-65673115 None:intergenic 55.0%
GAGCGTCAGACGTTCGTTGT+CGG - chr4_3:65673130-65673149 None:intergenic 55.0%
TCTATCGAAACCCTCCCTGC+CGG + chr4_3:65673170-65673189 Msa0656400:CDS 55.0%
!! GCACTAAAAGGCGCCAGAGA+AGG + chr4_3:65673356-65673375 Msa0656400:CDS 55.0%
!! TTTTCGAGAGGGGCAGCTTG+AGG + chr4_3:65673724-65673743 Msa0656400:CDS 55.0%
!!! CTTATTTTGCCGACGGGTGC+TGG + chr4_3:65673782-65673801 Msa0656400:CDS 55.0%
!! AGAAGAGCGCCCGAAATGAG+CGG - chr4_3:65673911-65673930 None:intergenic 55.0%
CGCTCTTCTAAGCAGTGCTC+AGG + chr4_3:65673922-65673941 Msa0656400:CDS 55.0%
! CCACAGGAGCTTTTGTCAGC+AGG - chr4_3:65676356-65676375 None:intergenic 55.0%
CCTGCTGACAAAAGCTCCTG+TGG + chr4_3:65676353-65676372 Msa0656400:CDS 55.0%
! TTTTGGGCAAGGGACACAGC+CGG - chr4_3:65677356-65677375 None:intergenic 55.0%
GAACCTTGCAAAGGGCAACC+CGG + chr4_3:65678454-65678473 Msa0656400:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr4_3:65678576-65678595 None:intergenic 55.0%
CAGAGTAGGCCAAATTGGCC+AGG - chr4_3:65678717-65678736 None:intergenic 55.0%
GCCTACTCTGCCCTTGTGTA+TGG + chr4_3:65678727-65678746 Msa0656400:intron 55.0%
CCAAGGTGTGGGACTCACAT+AGG - chr4_3:65679044-65679063 None:intergenic 55.0%
CCTATGTGAGTCCCACACCT+TGG + chr4_3:65679041-65679060 Msa0656400:intron 55.0%
CATACGCAGTCGTTTCCTGC+GGG + chr4_3:65679768-65679787 Msa0656400:intron 55.0%
GCTGTTGCGAGGGTAATGCA+CGG + chr4_3:65679948-65679967 Msa0656400:CDS 55.0%
!! GGTGGTGATGGAAGCAGCTA+AGG + chr4_3:65680373-65680392 Msa0656400:CDS 55.0%
!! GCATTGATTGAAGGTGGGGC+GGG + chr4_3:65680496-65680515 Msa0656400:three_prime_UTR 55.0%
! CATTGATTGAAGGTGGGGCG+GGG + chr4_3:65680497-65680516 Msa0656400:three_prime_UTR 55.0%
ATTGATTGAAGGTGGGGCGG+GGG + chr4_3:65680498-65680517 Msa0656400:three_prime_UTR 55.0%
ACATGGCGCGAAACAACTGC+AGG - chr4_3:65680541-65680560 None:intergenic 55.0%
CTGGAGTAACAGACAGGCAG+CGG - chr4_3:65680587-65680606 None:intergenic 55.0%
GTGAGGGGATGGAAGGGAAG+GGG - chr4_3:65673094-65673113 None:intergenic 60.0%
GGAGAAGAATCCGGCAGGGA+GGG - chr4_3:65673183-65673202 None:intergenic 60.0%
TGGAGAAGAATCCGGCAGGG+AGG - chr4_3:65673184-65673203 None:intergenic 60.0%
AACGACTTCCCAGCACCCGT+CGG - chr4_3:65673794-65673813 None:intergenic 60.0%
AGGAGATAGGACGTGCCGGA+AGG + chr4_3:65676120-65676139 Msa0656400:intron 60.0%
GGAGATAGGACGTGCCGGAA+GGG + chr4_3:65676121-65676140 Msa0656400:intron 60.0%
ATAGGACGTGCCGGAAGGGA+TGG + chr4_3:65676125-65676144 Msa0656400:CDS 60.0%
TAGGACGTGCCGGAAGGGAT+GGG + chr4_3:65676126-65676145 Msa0656400:CDS 60.0%
GGACAACCTCCCATCCCTTC+CGG - chr4_3:65676138-65676157 None:intergenic 60.0%
CAGCATGGCCAACTCCCAAC+AGG - chr4_3:65676536-65676555 None:intergenic 60.0%
GGCTGTGTCCCTTGCCCAAA+AGG + chr4_3:65677355-65677374 Msa0656400:CDS 60.0%
ACTAGAGCCCCCGCATATGC+AGG + chr4_3:65678480-65678499 Msa0656400:intron 60.0%
CTAGAGCCCCCGCATATGCA+GGG + chr4_3:65678481-65678500 Msa0656400:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr4_3:65678492-65678511 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr4_3:65678493-65678512 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr4_3:65678492-65678511 Msa0656400:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr4_3:65678493-65678512 Msa0656400:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr4_3:65678508-65678527 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - chr4_3:65678622-65678641 None:intergenic 60.0%
GAGTAACAGACAGGCAGCGG+CGG - chr4_3:65680584-65680603 None:intergenic 60.0%
CGCTGCCTGTCTGTTACTCC+AGG + chr4_3:65680585-65680604 Msa0656400:three_prime_UTR 60.0%
! AGAGCGCCCGAAATGAGCGG+AGG - chr4_3:65673908-65673927 None:intergenic 65.0%
GCACCGGGTTGCCCTTTGCA+AGG - chr4_3:65678460-65678479 None:intergenic 65.0%
! ATGCGGGGGCTCTAGTGCAC+CGG - chr4_3:65678476-65678495 None:intergenic 65.0%
TCCCGGACCCTGCATATGCG+GGG - chr4_3:65678491-65678510 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr4_3:65678491-65678510 Msa0656400:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr4_3:65678506-65678525 Msa0656400:intron 65.0%
GACGTGCCGGAAGGGATGGG+AGG + chr4_3:65676129-65676148 Msa0656400:CDS 70.0%
! TGCGGGGGCTCTAGTGCACC+GGG - chr4_3:65678475-65678494 None:intergenic 70.0%
GCCCCCGCATATGCAGGGTC+CGG + chr4_3:65678486-65678505 Msa0656400:intron 70.0%
CCCGGACCCTGCATATGCGG+GGG - chr4_3:65678490-65678509 None:intergenic 70.0%
CCCCCGCATATGCAGGGTCC+GGG + chr4_3:65678487-65678506 Msa0656400:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 65672851 65681014 65672851 ID=Msa0656400;Name=Msa0656400
chr4_3 mRNA 65672851 65681014 65672851 ID=Msa0656400-mRNA-1;Parent=Msa0656400;Name=Msa0656400-mRNA-1;_AED=0.12;_eAED=0.12;_QI=43|0.88|0.94|1|1|1|18|581|864
chr4_3 exon 65672851 65673943 65672851 ID=Msa0656400-mRNA-1:exon:18626;Parent=Msa0656400-mRNA-1
chr4_3 exon 65674031 65674084 65674031 ID=Msa0656400-mRNA-1:exon:18627;Parent=Msa0656400-mRNA-1
chr4_3 exon 65674294 65674406 65674294 ID=Msa0656400-mRNA-1:exon:18628;Parent=Msa0656400-mRNA-1
chr4_3 exon 65674524 65674712 65674524 ID=Msa0656400-mRNA-1:exon:18629;Parent=Msa0656400-mRNA-1
chr4_3 exon 65674827 65674905 65674827 ID=Msa0656400-mRNA-1:exon:18630;Parent=Msa0656400-mRNA-1
chr4_3 exon 65675175 65675228 65675175 ID=Msa0656400-mRNA-1:exon:18631;Parent=Msa0656400-mRNA-1
chr4_3 exon 65675325 65675399 65675325 ID=Msa0656400-mRNA-1:exon:18632;Parent=Msa0656400-mRNA-1
chr4_3 exon 65675522 65675575 65675522 ID=Msa0656400-mRNA-1:exon:18633;Parent=Msa0656400-mRNA-1
chr4_3 exon 65675991 65676035 65675991 ID=Msa0656400-mRNA-1:exon:18634;Parent=Msa0656400-mRNA-1
chr4_3 exon 65676122 65676216 65676122 ID=Msa0656400-mRNA-1:exon:18635;Parent=Msa0656400-mRNA-1
chr4_3 exon 65676304 65676433 65676304 ID=Msa0656400-mRNA-1:exon:18636;Parent=Msa0656400-mRNA-1
chr4_3 exon 65677021 65677119 65677021 ID=Msa0656400-mRNA-1:exon:18637;Parent=Msa0656400-mRNA-1
chr4_3 exon 65677350 65677405 65677350 ID=Msa0656400-mRNA-1:exon:18638;Parent=Msa0656400-mRNA-1
chr4_3 exon 65677688 65677790 65677688 ID=Msa0656400-mRNA-1:exon:18639;Parent=Msa0656400-mRNA-1
chr4_3 exon 65679360 65679529 65679360 ID=Msa0656400-mRNA-1:exon:18640;Parent=Msa0656400-mRNA-1
chr4_3 exon 65679777 65679801 65679777 ID=Msa0656400-mRNA-1:exon:18641;Parent=Msa0656400-mRNA-1
chr4_3 exon 65679906 65680021 65679906 ID=Msa0656400-mRNA-1:exon:18642;Parent=Msa0656400-mRNA-1
chr4_3 exon 65680346 65681014 65680346 ID=Msa0656400-mRNA-1:exon:18643;Parent=Msa0656400-mRNA-1
chr4_3 five_prime_UTR 65672851 65672893 65672851 ID=Msa0656400-mRNA-1:five_prime_utr;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65672894 65673943 65672894 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65674031 65674084 65674031 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65674294 65674406 65674294 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65674524 65674712 65674524 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65674827 65674905 65674827 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65675175 65675228 65675175 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65675325 65675399 65675325 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65675522 65675575 65675522 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65675991 65676035 65675991 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65676122 65676216 65676122 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65676304 65676433 65676304 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65677021 65677119 65677021 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65677350 65677405 65677350 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65677688 65677790 65677688 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65679360 65679529 65679360 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65679777 65679801 65679777 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65679906 65680021 65679906 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 CDS 65680346 65680433 65680346 ID=Msa0656400-mRNA-1:cds;Parent=Msa0656400-mRNA-1
chr4_3 three_prime_UTR 65680434 65681014 65680434 ID=Msa0656400-mRNA-1:three_prime_utr;Parent=Msa0656400-mRNA-1
Gene Sequence

>Msa0656400

ATGCAGTTTGATTCCGATTCAGACTCCGACGGATCTCACATTTCTTCAACTCCGCCAAGACAACAACCAAGTTCACCATCACCGCCAAAACCACCTCTTCCAGTTTCAAACAAAAAATGGAAATCCAAAACCAAACCCTCAAAATCCAATAAACCCCTTCCTAAACCCCCCGAAATTATTCCCGAACAAGAATCTTTCCCCTTCCCTTCCATCCCCTCACTTCCTTTCAACATCCGACAACGAACGTCTGACGCTCCTTCAACTTCATCTTCTCACTCTATCGAAACCCTCCCTGCCGGATTCTTCTCCAAATCAATTTCATTCTCCAAAATTCGTAAACCCTTACTCAATCTAGAAACTTCCGAAGCCGAACCGGTTGTTGATTCTGCAAAAACTGTAGCGAAATCTGTGAAGAAACATCCTAATTTGATATGTGCTAGTGTGGTAACGCCGATAGTCAAGGCACTAAAAGGCGCCAGAGAAGGAAATTTTGTGAAATTGAATTTGAATGGGAAGAGGAAAAAGTTTTTGAATAAAGGGTGGAAGAAAAATGGAAAATTTGGTAGTGGTAAAAGGTATTTTAGAAATAGTAATGGCAGCAATAGTGGTAGAAGTAGTAGAAGTAAACGTATAAAATCGGAACACAAAGAAGGCGATGATGATGATGAGGAGGAGGATGGTATGGGTGTTGAGAATGCAAAGCAACAGGAAAAGAAGAATGGTTGGGAAAATGAATGCAAAGTGTTGGAGGAGGCTGTGTTAGCAGCAAGAGATGAAGCTTCTGATGAGAATTTGGTGAAGTTGTTGAAATTGATTCATGGTTTTGATTCTTTTCGAGAGGGGCAGCTTGAGGCGATTAAGAATGTGCTTGCTGGGAAATCGACGATGCTTATTTTGCCGACGGGTGCTGGGAAGTCGTTGTGTTATCAGTTGAGTGCGTTGATTTTGCCTGGGATTACGCTTGTTGTTAGTCCTTTGGTAGCTTTGATGATTGATCAGCTTCGACAATTGCCTCCGCTCATTTCGGGCGCTCTTCTAAGCAGTGCTCAGTCATTTGAAGAATCCTCTGAAACACTCAACCAGCTTCGTCAAGGCACAATAAAGGTGCTTTTTGTTTCACCAGAGCGATTCTTGAATGAAGAATTTCTGTCTGTTATCTCTGGTGGGTTAGCCGTCTCACTTGTTGTTATTGATGAAGCACATTGTATATCTGAATGGTCTCACAATTTCCGACCTTCATTCATGAGACTCAGAGCGTCACTACTTCATAAGAGTCTTAATGTAGGTTCTATTCTTGCAATGACAGCAACTGCTACAACCATGACTTTAGATGCCATTATGTCTGCCCTGGATATTCCTTGCACAAATCTTATTCTAAATGCGCACTTAAGGGACAATTTGCGTTTAATGAAAGACCTACTGGTGCTTATGAAGTCTTCTCCTTTTGCGGAAGTTAAAAGCATCATAGTATACTGCAAATTTCAGTCTGAAACTGATCAAATTAGCAGATATTTGAATGATAACAACATCAAGGCAAAGAGTTATCATAGTGGTATTTCTGCAAAGGAACGTGGCTACGTACAGGAGTTGTTTGGTTCAAACAAGATCAGAGTGGTTGTTGCAACTGTGGCATTTGGCATGGGACTAGATAAAAGAGATGTTGGAGCAGTAATTCATTACAGTTTACCTGGAAGTCTGGAAGAGTATGTACAGGAGATAGGACGTGCCGGAAGGGATGGGAGGTTGTCCTATTGTCACCTATTTTATGATGATGAGATGTATTTCAAACTTCGTAGTCTAATGTACAGTGAAGGAATCGATGAATATGCAGTGAATAAATTTCTGTCTGAAGTGTTTCCTGCTGACAAAAGCTCCTGTGGGAAAATATGTTCGTTAATCAAAGAACCTGCTTCACGCAGGTTTGATATGAAAGAAGAGGTGATTCTCACAGTTTTGACACGCTTGGAGCTGGGTGACGTGCAGTACTTACATTTGCTTCCACAGACAAATGCAACGTGTGTTCTGAGTTTTCATATGACTCCGGCTGTGTCCCTTGCCCAAAAGGTTTCTGCTATTGCTGTGATTCTGAAAAGATCTGAAAATAAGCACGGACAATATACTTTTGATATTCCAACTGTGGCAAATGACATGGGGGTCACACCAGTTGAATTAACAAATCAGTTGTATGCCCTAAAGGTACGAAAAATGGATGCAATGTTTAATGCTGCATATTTTGCAGTAAATCTATGTGATAAGATGAACGGTTGCAGTAGTTTTGATCACACTTCATGCTTGCAAAGGATAATATTGGATTACTTTGCTGGAGTTGATAATGCTGATTTCTGCAAGAAAATTGATCAAAGCAGTCGTTTCCTGCGGGCAGATATAAAGGTTTTTCTACAGAGCAATTCGCATACTCGCTTTACACCAAGAGCTGTTGCGAGGGTAATGCACGGAATTGCAAGCCCAGCCTACCCTTATACAATATGGGGTAAAACCCATTTCTGGGGAAGGTATACCAAGATAGACTTTAAGGTGGTGATGGAAGCAGCTAAGGAAGAACTTAAAAAATTTATTGGAAAAGATTTACTCTAA
Protein sequence

>Msa0656400

MQFDSDSDSDGSHISSTPPRQQPSSPSPPKPPLPVSNKKWKSKTKPSKSNKPLPKPPEIIPEQESFPFPSIPSLPFNIRQRTSDAPSTSSSHSIETLPAGFFSKSISFSKIRKPLLNLETSEAEPVVDSAKTVAKSVKKHPNLICASVVTPIVKALKGAREGNFVKLNLNGKRKKFLNKGWKKNGKFGSGKRYFRNSNGSNSGRSSRSKRIKSEHKEGDDDDEEEDGMGVENAKQQEKKNGWENECKVLEEAVLAARDEASDENLVKLLKLIHGFDSFREGQLEAIKNVLAGKSTMLILPTGAGKSLCYQLSALILPGITLVVSPLVALMIDQLRQLPPLISGALLSSAQSFEESSETLNQLRQGTIKVLFVSPERFLNEEFLSVISGGLAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKSLNVGSILAMTATATTMTLDAIMSALDIPCTNLILNAHLRDNLRLMKDLLVLMKSSPFAEVKSIIVYCKFQSETDQISRYLNDNNIKAKSYHSGISAKERGYVQELFGSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPGSLEEYVQEIGRAGRDGRLSYCHLFYDDEMYFKLRSLMYSEGIDEYAVNKFLSEVFPADKSSCGKICSLIKEPASRRFDMKEEVILTVLTRLELGDVQYLHLLPQTNATCVLSFHMTPAVSLAQKVSAIAVILKRSENKHGQYTFDIPTVANDMGVTPVELTNQLYALKVRKMDAMFNAAYFAVNLCDKMNGCSSFDHTSCLQRIILDYFAGVDNADFCKKIDQSSRFLRADIKVFLQSNSHTRFTPRAVARVMHGIASPAYPYTIWGKTHFWGRYTKIDFKVVMEAAKEELKKFIGKDLL*