Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0703550 | XP_013446769.2 | 96.577 | 818 | 27 | 1 | 1 | 817 | 25 | 842 | 0.0 | 1641 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0703550 | sp|Q5ZLV4|NSUN2_CHICK | 37.155 | 724 | 369 | 18 | 46 | 761 | 41 | 686 | 4.32e-145 | 449 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0703550 | A0A396GP25 | 96.577 | 818 | 27 | 1 | 1 | 817 | 25 | 842 | 0.0 | 1641 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003720 | Msa0703550 | 0.814741 | 1.319949e-51 | -8.615850e-47 |
| Msa0045340 | Msa0703550 | 0.803445 | 3.474991e-49 | -8.615850e-47 |
| Msa0046830 | Msa0703550 | 0.837858 | 4.056209e-57 | -8.615850e-47 |
| Msa0047640 | Msa0703550 | 0.824177 | 9.296702e-54 | -8.615850e-47 |
| Msa0054820 | Msa0703550 | 0.805703 | 1.174355e-49 | -8.615850e-47 |
| Msa0093850 | Msa0703550 | 0.821376 | 4.173054e-53 | -8.615850e-47 |
| Msa0100160 | Msa0703550 | 0.804364 | 2.237818e-49 | -8.615850e-47 |
| Msa0106620 | Msa0703550 | 0.812218 | 4.735962e-51 | -8.615850e-47 |
| Msa0115130 | Msa0703550 | 0.809912 | 1.496450e-50 | -8.615850e-47 |
| Msa0608270 | Msa0703550 | 0.821391 | 4.139673e-53 | -8.615850e-47 |
| Msa0618950 | Msa0703550 | 0.843777 | 1.137555e-58 | -8.615850e-47 |
| Msa0618970 | Msa0703550 | 0.839969 | 1.153008e-57 | -8.615850e-47 |
| Msa0619200 | Msa0703550 | 0.801002 | 1.105822e-48 | -8.615850e-47 |
| Msa0619420 | Msa0703550 | 0.810636 | 1.044406e-50 | -8.615850e-47 |
| Msa0626630 | Msa0703550 | 0.803385 | 3.576040e-49 | -8.615850e-47 |
| Msa0628420 | Msa0703550 | 0.805066 | 1.597224e-49 | -8.615850e-47 |
| Msa0648830 | Msa0703550 | 0.824237 | 8.997604e-54 | -8.615850e-47 |
| Msa0652690 | Msa0703550 | 0.833211 | 6.074966e-56 | -8.615850e-47 |
| Msa0658590 | Msa0703550 | 0.943373 | 1.353109e-102 | -8.615850e-47 |
| Msa0659550 | Msa0703550 | 0.820199 | 7.783192e-53 | -8.615850e-47 |
| Msa0703550 | Msa0704890 | 0.812878 | 3.397392e-51 | -8.615850e-47 |
| Msa0703550 | Msa0705390 | 0.813787 | 2.144705e-51 | -8.615850e-47 |
| Msa0703550 | Msa0790400 | 0.825673 | 4.123065e-54 | -8.615850e-47 |
| Msa0703550 | Msa0944660 | 0.811189 | 7.929492e-51 | -8.615850e-47 |
| Msa0703550 | Msa0945240 | 0.837276 | 5.718250e-57 | -8.615850e-47 |
| Msa0703550 | Msa1012740 | 0.800605 | 1.332622e-48 | -8.615850e-47 |
| Msa0703550 | Msa1127590 | 0.810242 | 1.270762e-50 | -8.615850e-47 |
| Msa0703550 | Msa1132480 | 0.979692 | 1.572197e-148 | -8.615850e-47 |
| Msa0703550 | Msa1218450 | 0.827877 | 1.227172e-54 | -8.615850e-47 |
| Msa0703550 | Msa1219000 | 0.823282 | 1.506339e-53 | -8.615850e-47 |
| Msa0703550 | Msa1225860 | -0.808058 | 3.732415e-50 | -8.615850e-47 |
| Msa0703550 | Msa1226470 | 0.936974 | 7.340433e-98 | -8.615850e-47 |
| Msa0703550 | Msa1303070 | 0.813833 | 2.095271e-51 | -8.615850e-47 |
| Msa0703550 | Msa1332760 | 0.833437 | 5.335439e-56 | -8.615850e-47 |
| Msa0703550 | Msa1359560 | 0.808455 | 3.071137e-50 | -8.615850e-47 |
| Msa0703550 | Msa1364430 | 0.805626 | 1.218787e-49 | -8.615850e-47 |
| Msa0703550 | Msa1374060 | 0.818173 | 2.250141e-52 | -8.615850e-47 |
| Msa0703550 | Msa1383530 | 0.813063 | 3.093659e-51 | -8.615850e-47 |
| Msa0703550 | Msa1385810 | 0.829593 | 4.720925e-55 | -8.615850e-47 |
| Msa0703550 | Msa1390730 | 0.817222 | 3.687881e-52 | -8.615850e-47 |
| Msa0703550 | Msa1409260 | 0.818804 | 1.618967e-52 | -8.615850e-47 |
| Msa0703550 | Msa1438520 | 0.811521 | 6.717432e-51 | -8.615850e-47 |
| Msa0703550 | Msa1440310 | 0.834057 | 3.735321e-56 | -8.615850e-47 |
| Msa0703550 | Msa1443300 | 0.823547 | 1.306003e-53 | -8.615850e-47 |
| Msa0703550 | Msa1443310 | 0.803337 | 3.658611e-49 | -8.615850e-47 |
| Msa0703550 | Msa1446780 | 0.804483 | 2.114219e-49 | -8.615850e-47 |
| Msa0703550 | Msa1461540 | 0.812941 | 3.290519e-51 | -8.615850e-47 |
| Msa0146280 | Msa0703550 | 0.812970 | 3.242347e-51 | -8.615850e-47 |
| Msa0188690 | Msa0703550 | 0.816920 | 4.312105e-52 | -8.615850e-47 |
| Msa0225480 | Msa0703550 | 0.809787 | 1.592135e-50 | -8.615850e-47 |
| Msa0372810 | Msa0703550 | 0.813382 | 2.633347e-51 | -8.615850e-47 |
| Msa0378970 | Msa0703550 | 0.830402 | 2.996140e-55 | -8.615850e-47 |
| Msa0428580 | Msa0703550 | 0.835841 | 1.326441e-56 | -8.615850e-47 |
| Msa0432090 | Msa0703550 | 0.811710 | 6.111233e-51 | -8.615850e-47 |
| Msa0432170 | Msa0703550 | 0.808378 | 3.190240e-50 | -8.615850e-47 |
| Msa0474940 | Msa0703550 | 0.839113 | 1.924266e-57 | -8.615850e-47 |
| Msa0480780 | Msa0703550 | 0.835878 | 1.298462e-56 | -8.615850e-47 |
| Msa0270210 | Msa0703550 | 0.810545 | 1.092823e-50 | -8.615850e-47 |
| Msa0274980 | Msa0703550 | 0.817781 | 2.759154e-52 | -8.615850e-47 |
| Msa0307850 | Msa0703550 | 0.817591 | 3.045598e-52 | -8.615850e-47 |
| Msa0307860 | Msa0703550 | 0.802308 | 5.965928e-49 | -8.615850e-47 |
| Msa0322900 | Msa0703550 | 0.801881 | 7.302648e-49 | -8.615850e-47 |
| Msa0328080 | Msa0703550 | 0.807131 | 5.872056e-50 | -8.615850e-47 |
| Msa0341690 | Msa0703550 | 0.842501 | 2.488585e-58 | -8.615850e-47 |
| Msa0358400 | Msa0703550 | 0.800165 | 1.637653e-48 | -8.615850e-47 |
| Msa0485510 | Msa0703550 | 0.821686 | 3.537846e-53 | -8.615850e-47 |
| Msa0520950 | Msa0703550 | 0.809669 | 1.688234e-50 | -8.615850e-47 |
| Msa0531250 | Msa0703550 | 0.810864 | 9.324934e-51 | -8.615850e-47 |
| Msa0534720 | Msa0703550 | 0.821674 | 3.560454e-53 | -8.615850e-47 |
| Msa0544170 | Msa0703550 | 0.808922 | 2.441133e-50 | -8.615850e-47 |
| Msa0544730 | Msa0703550 | 0.836333 | 9.953724e-57 | -8.615850e-47 |
| Msa0554290 | Msa0703550 | 0.806862 | 6.693098e-50 | -8.615850e-47 |
| Msa0576680 | Msa0703550 | 0.802442 | 5.598217e-49 | -8.615850e-47 |
| Msa0583360 | Msa0703550 | -0.809366 | 1.960368e-50 | -8.615850e-47 |
| Msa0588090 | Msa0703550 | 0.828404 | 9.163271e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0703550 | MtrunA17_Chr8g0381831 | 96.577 | 818 | 27 | 1 | 1 | 817 | 25 | 842 | 0.0 | 1641 |
| Msa0703550 | MtrunA17_Chr3g0123801 | 66.794 | 783 | 222 | 9 | 1 | 767 | 1 | 761 | 0.0 | 1055 |
| Msa0703550 | MtrunA17_Chr3g0102711 | 30.876 | 217 | 118 | 6 | 166 | 378 | 296 | 484 | 3.52e-18 | 89.4 |
| Msa0703550 | MtrunA17_Chr5g0446691 | 33.728 | 169 | 86 | 7 | 185 | 351 | 340 | 484 | 9.60e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0703550 | AT2G22400.1 | 60.569 | 809 | 273 | 15 | 8 | 788 | 11 | 801 | 0.0 | 970 |
| Msa0703550 | AT4G40000.1 | 57.016 | 791 | 294 | 10 | 1 | 773 | 1 | 763 | 0.0 | 873 |
| Msa0703550 | AT4G40000.2 | 55.035 | 576 | 216 | 9 | 216 | 773 | 1 | 551 | 0.0 | 607 |
| Msa0703550 | AT4G26600.1 | 29.730 | 296 | 157 | 12 | 166 | 445 | 327 | 587 | 4.49e-17 | 86.3 |
| Msa0703550 | AT4G26600.3 | 29.730 | 296 | 157 | 12 | 166 | 445 | 327 | 587 | 4.78e-17 | 86.3 |
| Msa0703550 | AT5G55920.1 | 30.244 | 205 | 111 | 6 | 161 | 359 | 339 | 517 | 2.38e-16 | 84.0 |
| Msa0703550 | AT4G26600.8 | 31.313 | 198 | 108 | 4 | 166 | 359 | 327 | 500 | 3.47e-16 | 82.8 |
| Msa0703550 | AT4G26600.7 | 29.954 | 217 | 120 | 5 | 166 | 378 | 327 | 515 | 3.81e-16 | 82.8 |
| Msa0703550 | AT3G13180.1 | 31.361 | 169 | 90 | 4 | 185 | 351 | 334 | 478 | 5.20e-13 | 72.8 |
Find 201 sgRNAs with CRISPR-Local
Find 489 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCCAGGATGCCGTTTAAA+AGG | 0.190650 | 4_4:+75553217 | Msa0703550:CDS |
| TAAAAGAAAGCTACAATATC+AGG | 0.193012 | 4_4:+75556221 | Msa0703550:CDS |
| TTTACTTTCTGCAGGAATTC+AGG | 0.226926 | 4_4:+75553426 | Msa0703550:intron |
| TTCCGTTCTTGCAGCTATTC+TGG | 0.233522 | 4_4:+75555978 | Msa0703550:intron |
| GCTCTTCACCATGTGCTTTC+CGG | 0.245863 | 4_4:+75557207 | Msa0703550:CDS |
| CTTCATGATTAGTAACAATT+AGG | 0.246866 | 4_4:-75553186 | None:intergenic |
| TGGTTGTTGCGTGGTTATTA+TGG | 0.247821 | 4_4:+75557388 | Msa0703550:CDS |
| TGCAGGGTTCACATAAATTT+AGG | 0.248022 | 4_4:-75557870 | None:intergenic |
| TTAAAGCTAGAAAATGAAAT+TGG | 0.254499 | 4_4:+75552300 | Msa0703550:CDS |
| GGCACAGAAAATGGCTCTTC+TGG | 0.261873 | 4_4:+75557643 | Msa0703550:CDS |
| CTTTCCAGTATGTTTCCTTC+TGG | 0.278031 | 4_4:+75555573 | Msa0703550:CDS |
| TCCTTCTGGCAAATGCTATC+AGG | 0.284071 | 4_4:+75555587 | Msa0703550:CDS |
| CATCATTTAGAATCAATTCT+AGG | 0.285604 | 4_4:+75550818 | Msa0703550:CDS |
| GGTTTATCTTTACTCAAAAT+CGG | 0.300019 | 4_4:+75554385 | Msa0703550:intron |
| AAAGTCTTGCAAGCAATTCT+TGG | 0.304314 | 4_4:-75557609 | None:intergenic |
| ACGGAACTTGGGAACATCTT+TGG | 0.305209 | 4_4:-75555538 | None:intergenic |
| TTCCGTTCTTCACGTGTTAG+AGG | 0.306424 | 4_4:-75556141 | None:intergenic |
| ATAGGTTCCTCCCCTATTCT+TGG | 0.312286 | 4_4:+75552716 | Msa0703550:intron |
| TGCATCCCATACAGATGATT+TGG | 0.318756 | 4_4:+75556110 | Msa0703550:CDS |
| TGGTTATGTATGGAAGAATA+AGG | 0.325256 | 4_4:-75557250 | None:intergenic |
| GATGCAGTTGTGGCGCGTTT+TGG | 0.332809 | 4_4:-75550537 | None:intergenic |
| TCCTCTACCCATGGTTGCTC+TGG | 0.337907 | 4_4:-75550566 | None:intergenic |
| ATACGTCTAGGCACAGAAAA+TGG | 0.356138 | 4_4:+75557634 | Msa0703550:CDS |
| TACCATTTCCGCCACATATC+AGG | 0.360042 | 4_4:-75553343 | None:intergenic |
| GGTTGTTGCGTGGTTATTAT+GGG | 0.360528 | 4_4:+75557389 | Msa0703550:CDS |
| GTCAAAACAGAGAAAACGTT+TGG | 0.362743 | 4_4:+75550617 | Msa0703550:CDS |
| CGGCCTTTGCCCTGGTATCC+CGG | 0.363804 | 4_4:+75551114 | Msa0703550:CDS |
| GTACTTAGAACCAGGGAGTC+AGG | 0.375840 | 4_4:-75557911 | None:intergenic |
| TTGAGGGATTCTGTTGCAAC+TGG | 0.379975 | 4_4:-75557508 | None:intergenic |
| GTTTATCTTTACTCAAAATC+GGG | 0.381887 | 4_4:+75554386 | Msa0703550:CDS |
| CTGAATGCACATCCAAGAAT+AGG | 0.383509 | 4_4:-75552728 | None:intergenic |
| AATCACACTTCTACGGAACT+TGG | 0.388539 | 4_4:-75555550 | None:intergenic |
| TATCTTCCAAATCATCTGTA+TGG | 0.390960 | 4_4:-75556116 | None:intergenic |
| TGAATGCACATCCAAGAATA+GGG | 0.393782 | 4_4:-75552727 | None:intergenic |
| GCTTACTGTCAAGTACAAAA+TGG | 0.398024 | 4_4:-75552752 | None:intergenic |
| AACACAGCAGAGAAGGTTCC+AGG | 0.405306 | 4_4:+75556198 | Msa0703550:CDS |
| AGCAAAGTTCCCGGGATACC+AGG | 0.408224 | 4_4:-75551124 | None:intergenic |
| AGCTACAATATCAGGGCAAA+TGG | 0.412664 | 4_4:+75556229 | Msa0703550:CDS |
| TTACTTTCTGCAGGAATTCA+GGG | 0.413804 | 4_4:+75553427 | Msa0703550:intron |
| GTCGGCCAGGTCTCAAGAAA+TGG | 0.414879 | 4_4:+75554836 | Msa0703550:CDS |
| CACCTGATATGTGGCGGAAA+TGG | 0.415761 | 4_4:+75553341 | Msa0703550:CDS |
| AAGACAGGAAGCTGTTAGTA+TGG | 0.418992 | 4_4:+75552332 | Msa0703550:CDS |
| TATTGTTGCGTTGAACTTCT+CGG | 0.421626 | 4_4:+75556419 | Msa0703550:CDS |
| CAATCGGATGCTGGAGGGGT+AGG | 0.425361 | 4_4:+75557551 | Msa0703550:CDS |
| TTCACCTCCAACATAGTTAG+AGG | 0.427601 | 4_4:-75557680 | None:intergenic |
| ATAATTTGCTTGGTTATGTA+TGG | 0.434010 | 4_4:-75557260 | None:intergenic |
| GCATAGCAATTAAAACTTGT+AGG | 0.441578 | 4_4:-75553470 | None:intergenic |
| GGTTATGTATGGAAGAATAA+GGG | 0.441749 | 4_4:-75557249 | None:intergenic |
| TGAATGCCAAGCAAAGTTCC+CGG | 0.442297 | 4_4:-75551133 | None:intergenic |
| ATTCTCAAACTACTACTCAT+TGG | 0.443034 | 4_4:+75550683 | Msa0703550:CDS |
| GGTGTATAGTCTCGAGCAAT+TGG | 0.445281 | 4_4:-75552912 | None:intergenic |
| TTGTTGACTCGTCAACTTTG+AGG | 0.446066 | 4_4:-75557525 | None:intergenic |
| TCGGAGGATAAGGAAGGGTC+TGG | 0.446587 | 4_4:-75550658 | None:intergenic |
| AATTGTTGATCCACAAGAAT+GGG | 0.449501 | 4_4:+75550759 | Msa0703550:CDS |
| GGCAAATGCTATCAGGATCT+TGG | 0.450132 | 4_4:+75555594 | Msa0703550:CDS |
| GGTATCCCGGGAACTTTGCT+TGG | 0.450478 | 4_4:+75551127 | Msa0703550:CDS |
| TGTTGACTCGTCAACTTTGA+GGG | 0.452988 | 4_4:-75557524 | None:intergenic |
| AAAAGGGAATTATGAAAGAA+TGG | 0.453153 | 4_4:+75553234 | Msa0703550:CDS |
| TGATGATATTCGTTCCCAAT+TGG | 0.458564 | 4_4:+75550942 | Msa0703550:CDS |
| GATAAGGAAGGGTCTGGATC+TGG | 0.459026 | 4_4:-75550652 | None:intergenic |
| GCACAGAAAATGGCTCTTCT+GGG | 0.461885 | 4_4:+75557644 | Msa0703550:CDS |
| TCCTCAAGACTCTGTTTGCT+AGG | 0.463373 | 4_4:-75556006 | None:intergenic |
| GGACTTCAAGCGTCTTCTGC+AGG | 0.467959 | 4_4:+75557298 | Msa0703550:CDS |
| TGCGTGGTTATTATGGGTAA+AGG | 0.468510 | 4_4:+75557395 | Msa0703550:CDS |
| GCAATCCTTCGGATGATATC+CGG | 0.470647 | 4_4:-75557226 | None:intergenic |
| GATGCTGGAGGGGTAGGGCG+AGG | 0.471870 | 4_4:+75557557 | Msa0703550:CDS |
| TTCCTTTGATTCTTATTACA+AGG | 0.477035 | 4_4:+75550729 | Msa0703550:CDS |
| AGGTGAAGCACAGGCTGTAC+AGG | 0.479774 | 4_4:+75557696 | Msa0703550:CDS |
| GGCCTTTGCCCTGGTATCCC+GGG | 0.479981 | 4_4:+75551115 | Msa0703550:CDS |
| TCCCAGGATGCCGTTTAAAA+GGG | 0.480126 | 4_4:+75553218 | Msa0703550:CDS |
| ATGATTAGTAACAATTAGGT+TGG | 0.480820 | 4_4:-75553182 | None:intergenic |
| GAGGTGAGACAGAGGCGATT+CGG | 0.481360 | 4_4:+75551094 | Msa0703550:CDS |
| CATAACCAAGCAAATTATAC+AGG | 0.483742 | 4_4:+75557265 | Msa0703550:CDS |
| TAGGGCGAGGTTGTCCGTGA+TGG | 0.485207 | 4_4:+75557570 | Msa0703550:CDS |
| TAATTGTTGATCCACAAGAA+TGG | 0.487617 | 4_4:+75550758 | Msa0703550:CDS |
| AGATGCCTGTATAATTTGCT+TGG | 0.489845 | 4_4:-75557270 | None:intergenic |
| TTTGCCAGAAGGAAACATAC+TGG | 0.491351 | 4_4:-75555577 | None:intergenic |
| AATCGGATGCTGGAGGGGTA+GGG | 0.491437 | 4_4:+75557552 | Msa0703550:CDS |
| CAGAAGACGCTTGAAGTCCT+CGG | 0.494208 | 4_4:-75557294 | None:intergenic |
| ACCTTCCATTTCTTGAGACC+TGG | 0.495511 | 4_4:-75554841 | None:intergenic |
| ATGATGCAGGCAATGGTGTT+CGG | 0.497996 | 4_4:-75550801 | None:intergenic |
| ACTGTCTCAGTAACTAATGC+AGG | 0.498553 | 4_4:-75557887 | None:intergenic |
| AAGAATAAGGGGCAATCCTT+CGG | 0.498704 | 4_4:-75557237 | None:intergenic |
| TTGCAGCACAGCAATGAAGA+AGG | 0.499587 | 4_4:-75555793 | None:intergenic |
| CAACAATAGCAATCGGATGC+TGG | 0.499828 | 4_4:+75557542 | Msa0703550:CDS |
| GACAATTCCTCTAACTATGT+TGG | 0.501847 | 4_4:+75557673 | Msa0703550:CDS |
| GTAACAAGGTGACCATCAAA+TGG | 0.503653 | 4_4:-75556336 | None:intergenic |
| AGAAAATGGCTCTTCTGGGC+AGG | 0.504580 | 4_4:+75557648 | Msa0703550:CDS |
| AAGGCAGCAAACTTATTGCC+TGG | 0.507560 | 4_4:+75557368 | Msa0703550:CDS |
| AGGAATTCAGGGATGGGACA+AGG | 0.507941 | 4_4:+75553438 | Msa0703550:intron |
| AACAATATCCTTGACTGACT+TGG | 0.510238 | 4_4:-75556403 | None:intergenic |
| AGGCGATTCGGCCTTTGCCC+TGG | 0.513851 | 4_4:+75551106 | Msa0703550:CDS |
| GTCCGTGATGGTCTCTGCAA+TGG | 0.514638 | 4_4:+75557582 | Msa0703550:CDS |
| AGGATCACTGCCTGATGGAA+TGG | 0.519136 | 4_4:+75552948 | Msa0703550:CDS |
| GACGAGTCAACAATAGCAAT+CGG | 0.521462 | 4_4:+75557535 | Msa0703550:CDS |
| TGAGACAGTCCCTGACTCCC+TGG | 0.523646 | 4_4:+75557901 | Msa0703550:three_prime_UTR |
| AGAAGACGCTTGAAGTCCTC+GGG | 0.525989 | 4_4:-75557293 | None:intergenic |
| ATGACACAAACCATTCCATC+AGG | 0.526171 | 4_4:-75552958 | None:intergenic |
| AACCTCGTCGTTAGTTTCGA+AGG | 0.529695 | 4_4:+75558084 | Msa0703550:three_prime_UTR |
| GAGTATGAGTACTAATACAA+AGG | 0.530080 | 4_4:-75557935 | None:intergenic |
| TCAGCAGACTCCTCCATCAC+AGG | 0.530698 | 4_4:-75555705 | None:intergenic |
| ACCAGAGCAACCATGGGTAG+AGG | 0.533404 | 4_4:+75550565 | Msa0703550:exon |
| GGTTATTTGTAGGTTGCTGA+AGG | 0.535471 | 4_4:+75551072 | Msa0703550:intron |
| GTTGCGTTGAACTTCTCGGT+TGG | 0.536011 | 4_4:+75556423 | Msa0703550:CDS |
| TGATGCCGAGTTTGGTGAAA+AGG | 0.538887 | 4_4:+75557349 | Msa0703550:CDS |
| CAACTGAAAATGACCTCGGT+TGG | 0.539529 | 4_4:+75556450 | Msa0703550:CDS |
| TTCCTTGTAATAAGAATCAA+AGG | 0.539742 | 4_4:-75550731 | None:intergenic |
| CGTGCATTCACTTCGCGCTG+AGG | 0.542110 | 4_4:+75550975 | Msa0703550:CDS |
| ATCTTCCAAATCATCTGTAT+GGG | 0.545899 | 4_4:-75556115 | None:intergenic |
| CCACAACTTATTCGTCGGCC+AGG | 0.547313 | 4_4:+75554823 | Msa0703550:CDS |
| TTGTAATAAGAATCAAAGGA+AGG | 0.549320 | 4_4:-75550727 | None:intergenic |
| TGGAAAGAATCACACTTCTA+CGG | 0.550513 | 4_4:-75555557 | None:intergenic |
| AGTAACAATTAGGTTGGCTG+TGG | 0.551773 | 4_4:-75553176 | None:intergenic |
| ATCACACTTCTACGGAACTT+GGG | 0.552405 | 4_4:-75555549 | None:intergenic |
| TCCTGATAGCATTTGCCAGA+AGG | 0.552899 | 4_4:-75555588 | None:intergenic |
| TCGTGACCTTCCTCTACCCA+TGG | 0.553571 | 4_4:-75550575 | None:intergenic |
| TTTATCTTTACTCAAAATCG+GGG | 0.553832 | 4_4:+75554387 | Msa0703550:CDS |
| TACTTAGAACCAGGGAGTCA+GGG | 0.554184 | 4_4:-75557910 | None:intergenic |
| TGTAATAAGAATCAAAGGAA+GGG | 0.556130 | 4_4:-75550726 | None:intergenic |
| AAATGGCTCTTCTGGGCAGG+TGG | 0.556454 | 4_4:+75557651 | Msa0703550:CDS |
| ATACACCAATCCACAAAAGC+AGG | 0.557146 | 4_4:+75552928 | Msa0703550:CDS |
| TGCACAAAACACAGCAGAGA+AGG | 0.560171 | 4_4:+75556191 | Msa0703550:CDS |
| AGCTTCCACAACTTATTCGT+CGG | 0.560441 | 4_4:+75554818 | Msa0703550:CDS |
| TCATCAAACCAGAGCAACCA+TGG | 0.560896 | 4_4:+75550558 | Msa0703550:exon |
| CTGTGCGATGTCCCGTGTAG+TGG | 0.563031 | 4_4:+75553298 | Msa0703550:CDS |
| AATTGGAAATATCACAAGAC+AGG | 0.565338 | 4_4:+75552317 | Msa0703550:CDS |
| CTATGTTGGAGGTGAAGCAC+AGG | 0.566402 | 4_4:+75557687 | Msa0703550:CDS |
| ATCCTCATGCAATGCTCTAG+AGG | 0.566410 | 4_4:-75555744 | None:intergenic |
| GAATGCCAAGCAAAGTTCCC+GGG | 0.567018 | 4_4:-75551132 | None:intergenic |
| TTCTGCAGGAATTCAGGGAT+GGG | 0.568230 | 4_4:+75553432 | Msa0703550:intron |
| TTCCCGGGATACCAGGGCAA+AGG | 0.568734 | 4_4:-75551117 | None:intergenic |
| CATGAAGCACAACATTTCCC+AGG | 0.569181 | 4_4:+75553202 | Msa0703550:CDS |
| TTTCTGCAGGAATTCAGGGA+TGG | 0.570795 | 4_4:+75553431 | Msa0703550:intron |
| AAAGCTGCTGTGAGTTAGAG+AGG | 0.571057 | 4_4:+75557748 | Msa0703550:exon |
| ATGAATTGATCCCATTCTTG+TGG | 0.571295 | 4_4:-75550769 | None:intergenic |
| GTTATGTATGGAAGAATAAG+GGG | 0.573543 | 4_4:-75557248 | None:intergenic |
| ACAAAGGAGTACTTAGAACC+AGG | 0.576389 | 4_4:-75557919 | None:intergenic |
| GAATTGATTCTAAATGATGC+AGG | 0.577108 | 4_4:-75550814 | None:intergenic |
| AAGGTCACGAACTCAAAGAA+AGG | 0.577671 | 4_4:+75550588 | Msa0703550:CDS |
| TTCGTAAGGCACCTGATATG+TGG | 0.580986 | 4_4:+75553332 | Msa0703550:CDS |
| AAAAGAAAGCTACAATATCA+GGG | 0.582226 | 4_4:+75556222 | Msa0703550:CDS |
| ATAGCAATCGGATGCTGGAG+GGG | 0.584256 | 4_4:+75557547 | Msa0703550:CDS |
| CTGGTTTGATGATGCAGTTG+TGG | 0.584330 | 4_4:-75550547 | None:intergenic |
| TGCTGAAGGAGGTGAGACAG+AGG | 0.584654 | 4_4:+75551086 | Msa0703550:CDS |
| TATCAATGTTTCGTGTAACA+AGG | 0.585607 | 4_4:-75556350 | None:intergenic |
| AATAGCAATCGGATGCTGGA+GGG | 0.585812 | 4_4:+75557546 | Msa0703550:CDS |
| GGAATTCAGGGATGGGACAA+GGG | 0.587424 | 4_4:+75553439 | Msa0703550:intron |
| AATTCCTCTAACTATGTTGG+AGG | 0.587774 | 4_4:+75557676 | Msa0703550:CDS |
| GTCCTCTAACACGTGAAGAA+CGG | 0.593200 | 4_4:+75556139 | Msa0703550:CDS |
| TGGAGATGGTACACTTCGTA+AGG | 0.594241 | 4_4:+75553318 | Msa0703550:CDS |
| TATTTGTAGGTTGCTGAAGG+AGG | 0.594800 | 4_4:+75551075 | Msa0703550:intron |
| GAACACGATCAAATAACAGT+TGG | 0.595675 | 4_4:-75553276 | None:intergenic |
| GCAAAGTTCCCGGGATACCA+GGG | 0.600427 | 4_4:-75551123 | None:intergenic |
| CTATGTCTCCAAGTCAGTCA+AGG | 0.602696 | 4_4:+75556395 | Msa0703550:CDS |
| GAAAGACAAACAGCACGAGA+AGG | 0.602807 | 4_4:+75557182 | Msa0703550:CDS |
| CTTATTGCCTGGTTGTTGCG+TGG | 0.607662 | 4_4:+75557379 | Msa0703550:CDS |
| AAAGCAGGATCACTGCCTGA+TGG | 0.612819 | 4_4:+75552943 | Msa0703550:CDS |
| CAATAGCAATCGGATGCTGG+AGG | 0.613159 | 4_4:+75557545 | Msa0703550:CDS |
| CCTGGCCGACGAATAAGTTG+TGG | 0.613657 | 4_4:-75554823 | None:intergenic |
| AGACAAACAGCACGAGAAGG+TGG | 0.614134 | 4_4:+75557185 | Msa0703550:CDS |
| GCTCCAGTGTTCTGATCATG+AGG | 0.618002 | 4_4:-75555771 | None:intergenic |
| GCTTAGGAAGAATCAAACAT+TGG | 0.618665 | 4_4:+75551173 | Msa0703550:CDS |
| TCCTATTGAAAATGAAGCTG+TGG | 0.620217 | 4_4:+75554441 | Msa0703550:CDS |
| ATGCCTCATGATCAGAACAC+TGG | 0.621782 | 4_4:+75555768 | Msa0703550:CDS |
| GATGTCCCGTGTAGTGGAGA+TGG | 0.622673 | 4_4:+75553304 | Msa0703550:CDS |
| GGAAGATGACATTACTAGTG+TGG | 0.624217 | 4_4:+75555641 | Msa0703550:CDS |
| AGGTATATGACAAGAGCAGT+TGG | 0.624400 | 4_4:+75555505 | Msa0703550:intron |
| ACTAGAGAATCCTGTGATGG+AGG | 0.624811 | 4_4:+75555695 | Msa0703550:CDS |
| CAAAGGAGTACTTAGAACCA+GGG | 0.627661 | 4_4:-75557918 | None:intergenic |
| GATGATATCCGGAAAGCACA+TGG | 0.628461 | 4_4:-75557215 | None:intergenic |
| GAGCAACCATGGGTAGAGGA+AGG | 0.629891 | 4_4:+75550569 | Msa0703550:exon |
| CAATATCAGGGCAAATGGAG+AGG | 0.631567 | 4_4:+75556234 | Msa0703550:CDS |
| ATAATAACCACGCAACAACC+AGG | 0.639292 | 4_4:-75557386 | None:intergenic |
| ATTCTAAATGATGCAGGCAA+TGG | 0.639368 | 4_4:-75550808 | None:intergenic |
| CATATGAGACTACCTGGCAG+AGG | 0.641063 | 4_4:-75555825 | None:intergenic |
| TTCCTCTAGAGCATTGCATG+AGG | 0.643867 | 4_4:+75555742 | Msa0703550:CDS |
| GAATGCACATCCAAGAATAG+GGG | 0.644846 | 4_4:-75552726 | None:intergenic |
| CTGTCTCAGTAACTAATGCA+GGG | 0.645066 | 4_4:-75557886 | None:intergenic |
| CATCAAACCAGAGCAACCAT+GGG | 0.648138 | 4_4:+75550559 | Msa0703550:exon |
| ACGTGAAGAACGGAATTCTG+AGG | 0.648938 | 4_4:+75556149 | Msa0703550:CDS |
| GCCAGGTCTCAAGAAATGGA+AGG | 0.649652 | 4_4:+75554840 | Msa0703550:CDS |
| TAGTAATTGTAATGTTGACA+TGG | 0.651091 | 4_4:+75555620 | Msa0703550:CDS |
| TGCACATCCAAGAATAGGGG+AGG | 0.651957 | 4_4:-75552723 | None:intergenic |
| AGCACTAGAGAATCCTGTGA+TGG | 0.653225 | 4_4:+75555692 | Msa0703550:CDS |
| AAGCTGCTGTGAGTTAGAGA+GGG | 0.654500 | 4_4:+75557749 | Msa0703550:exon |
| AGTGTACCATCTCCACTACA+CGG | 0.655332 | 4_4:-75553310 | None:intergenic |
| GTGTACCATCTCCACTACAC+GGG | 0.658766 | 4_4:-75553309 | None:intergenic |
| AATTATACAGGCATCTCCCG+AGG | 0.660476 | 4_4:+75557277 | Msa0703550:CDS |
| GGAAGAATCAAACATTGGAG+AGG | 0.660823 | 4_4:+75551178 | Msa0703550:CDS |
| GTAAGGCACCTGATATGTGG+CGG | 0.665415 | 4_4:+75553335 | Msa0703550:CDS |
| GCTTTCCGGATATCATCCGA+AGG | 0.673685 | 4_4:+75557221 | Msa0703550:CDS |
| ACCTAGCAAACAGAGTCTTG+AGG | 0.674715 | 4_4:+75556005 | Msa0703550:CDS |
| TGTGATGGAGGAGTCTGCTG+AGG | 0.678814 | 4_4:+75555707 | Msa0703550:CDS |
| AAATGAAGCTGTGGTTGCAG+AGG | 0.679409 | 4_4:+75554450 | Msa0703550:CDS |
| GTCCATTGCAGAGACCATCA+CGG | 0.681705 | 4_4:-75557584 | None:intergenic |
| TTATCTTTACTCAAAATCGG+GGG | 0.696495 | 4_4:+75554388 | Msa0703550:CDS |
| TCAGCAACTGAAAATGACCT+CGG | 0.702374 | 4_4:+75556446 | Msa0703550:CDS |
| AGTCGTCAAAGCAGTTCCAG+AGG | 0.703422 | 4_4:+75556071 | Msa0703550:CDS |
| AAACATCTTCATGCCAACCG+AGG | 0.713060 | 4_4:-75556463 | None:intergenic |
| TGCCTTCGAAACTAACGACG+AGG | 0.720498 | 4_4:-75558086 | None:intergenic |
| GTTTCAGATGAATTCATGTG+CGG | 0.725014 | 4_4:-75556039 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATAAGTAATATTTTCT+GGG | + | chr4_4:75551561-75551580 | Msa0703550:intron | 10.0% |
| !!! | ATAATTTTAATTTCAGTTAA+TGG | - | chr4_4:75552188-75552207 | None:intergenic | 10.0% |
| !!! | TAAGTCTTAAAAAATATTTT+AGG | - | chr4_4:75553405-75553424 | None:intergenic | 10.0% |
| !!! | GAATATTTTACATATATTTT+AGG | + | chr4_4:75553505-75553524 | Msa0703550:intron | 10.0% |
| !! | AATTATTATTTATTCAAATC+AGG | - | chr4_4:75556580-75556599 | None:intergenic | 10.0% |
| !! | TAAATCTATTATTATTTGAA+TGG | + | chr4_4:75557061-75557080 | Msa0703550:intron | 10.0% |
| !! | TGATTATAATTTATGTGAAT+TGG | + | chr4_4:75551051-75551070 | Msa0703550:intron | 15.0% |
| !!! | GTATAATAAGTAATATTTTC+TGG | + | chr4_4:75551560-75551579 | Msa0703550:intron | 15.0% |
| !! | TTAAAAAGATATCAATATCA+GGG | + | chr4_4:75551669-75551688 | Msa0703550:intron | 15.0% |
| !! | AAAATAAAGCATGTAATATT+GGG | - | chr4_4:75551742-75551761 | None:intergenic | 15.0% |
| !! | AAAAATAAAGCATGTAATAT+TGG | - | chr4_4:75551743-75551762 | None:intergenic | 15.0% |
| !! | AGACATAAATAAATTCTTAA+AGG | - | chr4_4:75552678-75552697 | None:intergenic | 15.0% |
| !!! | AATAGTTTGCTAAAATTATT+GGG | + | chr4_4:75553033-75553052 | Msa0703550:intron | 15.0% |
| !! | AATGTATTAAAATCAAAACT+CGG | - | chr4_4:75554918-75554937 | None:intergenic | 15.0% |
| !! | CAATTACATTAAAAAATCAT+TGG | - | chr4_4:75555093-75555112 | None:intergenic | 15.0% |
| !!! | CAATGATTTTTTAATGTAAT+TGG | + | chr4_4:75555091-75555110 | Msa0703550:intron | 15.0% |
| !!! | AACAGTATAAAGAATTTTTA+TGG | + | chr4_4:75556297-75556316 | Msa0703550:CDS | 15.0% |
| !!! | TTCATATCTTTTTTTTTTTG+AGG | + | chr4_4:75556819-75556838 | Msa0703550:intron | 15.0% |
| !!! | TCATATCTTTTTTTTTTTGA+GGG | + | chr4_4:75556820-75556839 | Msa0703550:intron | 15.0% |
| !!! | TATTTTTGACATAATTTGTA+AGG | + | chr4_4:75556857-75556876 | Msa0703550:intron | 15.0% |
| !!! | ATTTATGTTATTGCATTTTA+TGG | + | chr4_4:75557810-75557829 | Msa0703550:three_prime_UTR | 15.0% |
| !!! | ATTTTATCATTTAACATTCA+CGG | - | chr4_4:75558060-75558079 | None:intergenic | 15.0% |
| !!! | AAATGAATTTTGTGTTTGTT+TGG | + | chr4_4:75550898-75550917 | Msa0703550:intron | 20.0% |
| !!! | TGAGGTATTAAAAATGATTA+TGG | + | chr4_4:75550993-75551012 | Msa0703550:intron | 20.0% |
| !! | GTCAAATAAACAAGTTAATT+AGG | - | chr4_4:75551587-75551606 | None:intergenic | 20.0% |
| !! | GTTAAAAAGATATCAATATC+AGG | + | chr4_4:75551668-75551687 | Msa0703550:intron | 20.0% |
| !! | TAAAAAGATATCAATATCAG+GGG | + | chr4_4:75551670-75551689 | Msa0703550:intron | 20.0% |
| !!! | ATATTAAACTAATTTAGCTC+TGG | + | chr4_4:75552005-75552024 | Msa0703550:intron | 20.0% |
| !! | TTAAAGCTAGAAAATGAAAT+TGG | + | chr4_4:75552300-75552319 | Msa0703550:CDS | 20.0% |
| !! | CTAAAACAAAGAAAAATGAA+AGG | - | chr4_4:75552864-75552883 | None:intergenic | 20.0% |
| !! | ACAATCAAAGCAATTAAAAA+TGG | - | chr4_4:75552996-75553015 | None:intergenic | 20.0% |
| !!! | CAATAGTTTGCTAAAATTAT+TGG | + | chr4_4:75553032-75553051 | Msa0703550:intron | 20.0% |
| !!! | CTAGTTTCTTATTTGTAATT+AGG | + | chr4_4:75553090-75553109 | Msa0703550:intron | 20.0% |
| !!! | TTTCATAATTCCCTTTTAAA+CGG | - | chr4_4:75553231-75553250 | None:intergenic | 20.0% |
| !!! | CAAATGATTACAAAGTTTTT+AGG | - | chr4_4:75553797-75553816 | None:intergenic | 20.0% |
| !! | ATTTAGTCACAAAAAGTTAA+TGG | + | chr4_4:75553951-75553970 | Msa0703550:intron | 20.0% |
| !!! | ATCCATAAATTTTATGAACA+CGG | - | chr4_4:75554617-75554636 | None:intergenic | 20.0% |
| !!! | TTATTAGATTTTCATGTACT+GGG | - | chr4_4:75554697-75554716 | None:intergenic | 20.0% |
| !!! | ACTAAAACTTTAGAATGTAT+AGG | - | chr4_4:75554970-75554989 | None:intergenic | 20.0% |
| !!! | TATACATTCTAAAGTTTTAG+TGG | + | chr4_4:75554969-75554988 | Msa0703550:intron | 20.0% |
| !! | GTATCATTGCATAATATTAA+AGG | - | chr4_4:75555021-75555040 | None:intergenic | 20.0% |
| !!! | TTAAAGTTGTTTGATTTTTG+AGG | + | chr4_4:75555479-75555498 | Msa0703550:intron | 20.0% |
| !! | AAAATGAATATATACGAACT+TGG | - | chr4_4:75555925-75555944 | None:intergenic | 20.0% |
| !!! | TCGTATATATTCATTTTAAC+TGG | + | chr4_4:75555928-75555947 | Msa0703550:intron | 20.0% |
| !!! | AGACTTTTTTTATTACATGA+TGG | + | chr4_4:75556534-75556553 | Msa0703550:intron | 20.0% |
| !! | TTTATTCAAATCAGGAAAAT+GGG | - | chr4_4:75556572-75556591 | None:intergenic | 20.0% |
| !! | ATTTATTCAAATCAGGAAAA+TGG | - | chr4_4:75556573-75556592 | None:intergenic | 20.0% |
| !! | TCAAAGATAATTATATCTCT+TGG | + | chr4_4:75556676-75556695 | Msa0703550:intron | 20.0% |
| !!! | TTTTATCATTTAACATTCAC+GGG | - | chr4_4:75558059-75558078 | None:intergenic | 20.0% |
| !! | AGTAGTAGTTTGAGAATTTT+CGG | - | chr4_4:75550680-75550699 | None:intergenic | 25.0% |
| ! | TGTAATAAGAATCAAAGGAA+GGG | - | chr4_4:75550729-75550748 | None:intergenic | 25.0% |
| ! | TTGTAATAAGAATCAAAGGA+AGG | - | chr4_4:75550730-75550749 | None:intergenic | 25.0% |
| ! | TTCCTTTGATTCTTATTACA+AGG | + | chr4_4:75550729-75550748 | Msa0703550:CDS | 25.0% |
| ! | TTCCTTGTAATAAGAATCAA+AGG | - | chr4_4:75550734-75550753 | None:intergenic | 25.0% |
| !! | CATCATTTAGAATCAATTCT+AGG | + | chr4_4:75550818-75550837 | Msa0703550:CDS | 25.0% |
| ! | TATGTGAATTGGTTATTTGT+AGG | + | chr4_4:75551062-75551081 | Msa0703550:intron | 25.0% |
| !!! | ATAGAACCAACAAAAGTATT+AGG | + | chr4_4:75551249-75551268 | Msa0703550:intron | 25.0% |
| !!! | TAGAACCAACAAAAGTATTA+GGG | + | chr4_4:75551250-75551269 | Msa0703550:intron | 25.0% |
| !! | AATATCCCTAATACTTTTGT+TGG | - | chr4_4:75551258-75551277 | None:intergenic | 25.0% |
| !! | TCCCTAAATCATTTTCTAAA+GGG | - | chr4_4:75551955-75551974 | None:intergenic | 25.0% |
| !! | ATCCCTAAATCATTTTCTAA+AGG | - | chr4_4:75551956-75551975 | None:intergenic | 25.0% |
| !!! | TTTCTAGCTTTAAAAATTCG+TGG | - | chr4_4:75552293-75552312 | None:intergenic | 25.0% |
| ! | GATTGAAAGAGAATATAAAG+TGG | - | chr4_4:75552363-75552382 | None:intergenic | 25.0% |
| ! | AATCTTCATGATCATACAAA+AGG | + | chr4_4:75552379-75552398 | Msa0703550:intron | 25.0% |
| !! | TTTTATTCTAGTACTCTGAA+TGG | + | chr4_4:75552409-75552428 | Msa0703550:intron | 25.0% |
| ! | ATATATTACAGAGTTTACAC+AGG | + | chr4_4:75552485-75552504 | Msa0703550:intron | 25.0% |
| ! | TGATACTTTAACAGAAATCA+CGG | + | chr4_4:75552570-75552589 | Msa0703550:intron | 25.0% |
| !!! | CTAATGTTTGTTTTTGACAT+AGG | + | chr4_4:75552698-75552717 | Msa0703550:intron | 25.0% |
| !! | CTTTGATTGTCAATTGTTTT+TGG | + | chr4_4:75553006-75553025 | Msa0703550:intron | 25.0% |
| ! | ATGATTAGTAACAATTAGGT+TGG | - | chr4_4:75553185-75553204 | None:intergenic | 25.0% |
| ! | CTTCATGATTAGTAACAATT+AGG | - | chr4_4:75553189-75553208 | None:intergenic | 25.0% |
| ! | AAAAGGGAATTATGAAAGAA+TGG | + | chr4_4:75553234-75553253 | Msa0703550:CDS | 25.0% |
| !!! | GCTTTTTCCAATTAGAAAAT+TGG | + | chr4_4:75553595-75553614 | Msa0703550:intron | 25.0% |
| !! | CCTATTACCAATTTTCTAAT+TGG | - | chr4_4:75553605-75553624 | None:intergenic | 25.0% |
| !! | CCAATTAGAAAATTGGTAAT+AGG | + | chr4_4:75553602-75553621 | Msa0703550:intron | 25.0% |
| !!! | TTACAAAGTTTTTAGGATGA+GGG | - | chr4_4:75553790-75553809 | None:intergenic | 25.0% |
| !!! | ATTACAAAGTTTTTAGGATG+AGG | - | chr4_4:75553791-75553810 | None:intergenic | 25.0% |
| ! | TAACTATGACAAATCTAGTT+TGG | - | chr4_4:75553905-75553924 | None:intergenic | 25.0% |
| ! | TATTAATCTGGAAGAACAAA+AGG | - | chr4_4:75554041-75554060 | None:intergenic | 25.0% |
| ! | TATAAGGAGCAATATTAATC+TGG | - | chr4_4:75554053-75554072 | None:intergenic | 25.0% |
| !!! | TTGCTCCTTATATGTTTTAA+AGG | + | chr4_4:75554061-75554080 | Msa0703550:intron | 25.0% |
| !!! | TGCTCCTTATATGTTTTAAA+GGG | + | chr4_4:75554062-75554081 | Msa0703550:intron | 25.0% |
| ! | TATTAATCTGGAAGAACAAA+AGG | - | chr4_4:75554041-75554060 | None:intergenic | 25.0% |
| !!! | TCTTTAAAACATATAAGGAG+CGG | - | chr4_4:75554144-75554163 | None:intergenic | 25.0% |
| !!! | TGTGCTCTTTAAAACATATA+AGG | - | chr4_4:75554149-75554168 | None:intergenic | 25.0% |
| !!! | AAAAACATTATTTTGCAGCA+AGG | + | chr4_4:75554247-75554266 | Msa0703550:intron | 25.0% |
| !! | ATTATGTTGCTTACATATCT+AGG | + | chr4_4:75554281-75554300 | Msa0703550:intron | 25.0% |
| ! | GATAATCAATATAGTTGTTG+AGG | - | chr4_4:75554362-75554381 | None:intergenic | 25.0% |
| !! | ACAACTATATTGATTATCTC+AGG | + | chr4_4:75554364-75554383 | Msa0703550:intron | 25.0% |
| ! | GGTTTATCTTTACTCAAAAT+CGG | + | chr4_4:75554385-75554404 | Msa0703550:intron | 25.0% |
| ! | GTTTATCTTTACTCAAAATC+GGG | + | chr4_4:75554386-75554405 | Msa0703550:CDS | 25.0% |
| ! | TTTATCTTTACTCAAAATCG+GGG | + | chr4_4:75554387-75554406 | Msa0703550:CDS | 25.0% |
| ! | TACCGTGTTCATAAAATTTA+TGG | + | chr4_4:75554612-75554631 | Msa0703550:intron | 25.0% |
| !! | TTTTTCTAAGTGTGTATGTA+AGG | - | chr4_4:75554643-75554662 | None:intergenic | 25.0% |
| ! | CACTTAGAAAAAATTCAACA+CGG | + | chr4_4:75554651-75554670 | Msa0703550:intron | 25.0% |
| !! | CTTATTAGATTTTCATGTAC+TGG | - | chr4_4:75554698-75554717 | None:intergenic | 25.0% |
| ! | CAGTACATGAAAATCTAATA+AGG | + | chr4_4:75554696-75554715 | Msa0703550:intron | 25.0% |
| ! | ATTAAAATCAAAACTCGGTT+TGG | - | chr4_4:75554913-75554932 | None:intergenic | 25.0% |
| !!! | AGGATTTTGAAGGAAAATAA+TGG | + | chr4_4:75555048-75555067 | Msa0703550:intron | 25.0% |
| !!! | GGATTTTGAAGGAAAATAAT+GGG | + | chr4_4:75555049-75555068 | Msa0703550:intron | 25.0% |
| !! | ATGTAATTGGTGTTTCATAT+AGG | + | chr4_4:75555104-75555123 | Msa0703550:intron | 25.0% |
| !! | TGTAATTGGTGTTTCATATA+GGG | + | chr4_4:75555105-75555124 | Msa0703550:intron | 25.0% |
| ! | GTTAATGTAAGCATATTGAT+GGG | - | chr4_4:75555278-75555297 | None:intergenic | 25.0% |
| ! | TGTTAATGTAAGCATATTGA+TGG | - | chr4_4:75555279-75555298 | None:intergenic | 25.0% |
| ! | TTATGGCTTCAAATATAGAA+GGG | + | chr4_4:75555411-75555430 | Msa0703550:intron | 25.0% |
| ! | TAGTAATTGTAATGTTGACA+TGG | + | chr4_4:75555620-75555639 | Msa0703550:CDS | 25.0% |
| ! | GAAAATGAAAAAACTGAAGA+TGG | + | chr4_4:75555663-75555682 | Msa0703550:CDS | 25.0% |
| !! | ACTAAATAGTCAGGAAATTT+TGG | + | chr4_4:75555881-75555900 | Msa0703550:intron | 25.0% |
| !!! | TCAGGAAATTTTGGTTAATA+AGG | + | chr4_4:75555890-75555909 | Msa0703550:intron | 25.0% |
| !!! | CAGGAAATTTTGGTTAATAA+GGG | + | chr4_4:75555891-75555910 | Msa0703550:intron | 25.0% |
| ! | TAAAAGAAAGCTACAATATC+AGG | + | chr4_4:75556221-75556240 | Msa0703550:CDS | 25.0% |
| ! | AAAAGAAAGCTACAATATCA+GGG | + | chr4_4:75556222-75556241 | Msa0703550:CDS | 25.0% |
| !! | CATCTTTAAAAAAGACAACA+GGG | - | chr4_4:75556266-75556285 | None:intergenic | 25.0% |
| !! | TCATCTTTAAAAAAGACAAC+AGG | - | chr4_4:75556267-75556286 | None:intergenic | 25.0% |
| ! | CAAGTTCATTAAATGATCTA+TGG | - | chr4_4:75556729-75556748 | None:intergenic | 25.0% |
| !!! | ATAATTTGCTTGGTTATGTA+TGG | - | chr4_4:75557263-75557282 | None:intergenic | 25.0% |
| !! | GTTATTGCATTTTATGGAAA+TGG | + | chr4_4:75557816-75557835 | Msa0703550:three_prime_UTR | 25.0% |
| ATTCTCAAACTACTACTCAT+TGG | + | chr4_4:75550683-75550702 | Msa0703550:CDS | 30.0% | |
| TAATTGTTGATCCACAAGAA+TGG | + | chr4_4:75550758-75550777 | Msa0703550:CDS | 30.0% | |
| AATTGTTGATCCACAAGAAT+GGG | + | chr4_4:75550759-75550778 | Msa0703550:CDS | 30.0% | |
| ! | GAATTGATTCTAAATGATGC+AGG | - | chr4_4:75550817-75550836 | None:intergenic | 30.0% |
| ! | CACGAAATCATTTTCCAATT+GGG | - | chr4_4:75550959-75550978 | None:intergenic | 30.0% |
| !!! | ATCCAAAATTCTGTTTTAGC+GGG | - | chr4_4:75551457-75551476 | None:intergenic | 30.0% |
| !! | CATCCAAAATTCTGTTTTAG+CGG | - | chr4_4:75551458-75551477 | None:intergenic | 30.0% |
| TAGAATAGTAGCAGACTATT+TGG | + | chr4_4:75551779-75551798 | Msa0703550:intron | 30.0% | |
| AGTCATACCATGTAGAAATA+AGG | - | chr4_4:75551914-75551933 | None:intergenic | 30.0% | |
| ! | TCCCCTTTAGAAAATGATTT+AGG | + | chr4_4:75551950-75551969 | Msa0703550:intron | 30.0% |
| !! | CCCTAAATCATTTTCTAAAG+GGG | - | chr4_4:75551954-75551973 | None:intergenic | 30.0% |
| ! | CCCCTTTAGAAAATGATTTA+GGG | + | chr4_4:75551951-75551970 | Msa0703550:intron | 30.0% |
| AATTGGAAATATCACAAGAC+AGG | + | chr4_4:75552317-75552336 | Msa0703550:CDS | 30.0% | |
| TAAAAAGTAGCAGTAACCTA+CGG | - | chr4_4:75552443-75552462 | None:intergenic | 30.0% | |
| GAATTGAAAGAAAAGTGAAG+AGG | + | chr4_4:75552507-75552526 | Msa0703550:intron | 30.0% | |
| CAAATTAAGCAAATCGAATC+AGG | - | chr4_4:75552817-75552836 | None:intergenic | 30.0% | |
| !! | AATTGGAATGTTTTTGAACC+TGG | - | chr4_4:75552898-75552917 | None:intergenic | 30.0% |
| !! | TGGACATTCTTTTTGTTTGA+TGG | - | chr4_4:75553159-75553178 | None:intergenic | 30.0% |
| GGTTGTAAAGAAAGTAGAAT+TGG | - | chr4_4:75553384-75553403 | None:intergenic | 30.0% | |
| !!! | AGACTTATTTTACTTTCTGC+AGG | + | chr4_4:75553418-75553437 | Msa0703550:intron | 30.0% |
| GCATAGCAATTAAAACTTGT+AGG | - | chr4_4:75553473-75553492 | None:intergenic | 30.0% | |
| ! | AAATTGGTAATAGGCAATGA+AGG | + | chr4_4:75553611-75553630 | Msa0703550:intron | 30.0% |
| !! | GTTGACTTTGATTTTAATCC+TGG | + | chr4_4:75553671-75553690 | Msa0703550:intron | 30.0% |
| !!! | TACAAAGTTTTTAGGATGAG+GGG | - | chr4_4:75553789-75553808 | None:intergenic | 30.0% |
| CACAAAATTAACCCATTATC+AGG | - | chr4_4:75553857-75553876 | None:intergenic | 30.0% | |
| CTAGATTTGTCATAGTTATC+TGG | + | chr4_4:75553907-75553926 | Msa0703550:intron | 30.0% | |
| GGTTACAAATTTCAAACAGA+AGG | - | chr4_4:75553995-75554014 | None:intergenic | 30.0% | |
| !! | TGTGCCCTTTAAAACATATA+AGG | - | chr4_4:75554069-75554088 | None:intergenic | 30.0% |
| TTATCTTTACTCAAAATCGG+GGG | + | chr4_4:75554388-75554407 | Msa0703550:CDS | 30.0% | |
| AAAATTCAACACGGAGAAAT+AGG | + | chr4_4:75554660-75554679 | Msa0703550:intron | 30.0% | |
| AAAGAGGGGATAAAGAAAAA+TGG | - | chr4_4:75554736-75554755 | None:intergenic | 30.0% | |
| !!! | TAAAGTTTTAGTGGATTCCT+GGG | + | chr4_4:75554978-75554997 | Msa0703550:intron | 30.0% |
| TATGCAATGATACAATCTGA+AGG | + | chr4_4:75555028-75555047 | Msa0703550:intron | 30.0% | |
| ! | TACAATCTGAAGGATTTTGA+AGG | + | chr4_4:75555038-75555057 | Msa0703550:intron | 30.0% |
| !! | TTTTGAAGGAAAATAATGGG+TGG | + | chr4_4:75555052-75555071 | Msa0703550:intron | 30.0% |
| !! | TTTGCTGATTTGCATTTGTT+TGG | + | chr4_4:75555196-75555215 | Msa0703550:intron | 30.0% |
| AATTCTGACATTCAATCAGT+TGG | + | chr4_4:75555249-75555268 | Msa0703550:intron | 30.0% | |
| TGCTTACATTAACACATTGA+TGG | + | chr4_4:75555285-75555304 | Msa0703550:intron | 30.0% | |
| CTTATGGCTTCAAATATAGA+AGG | + | chr4_4:75555410-75555429 | Msa0703550:intron | 30.0% | |
| TTATTACATATGAGACTACC+TGG | - | chr4_4:75555834-75555853 | None:intergenic | 30.0% | |
| ! | TTATCATTCACATTTTCCTC+TGG | - | chr4_4:75556090-75556109 | None:intergenic | 30.0% |
| ATCTTCCAAATCATCTGTAT+GGG | - | chr4_4:75556118-75556137 | None:intergenic | 30.0% | |
| TATCTTCCAAATCATCTGTA+TGG | - | chr4_4:75556119-75556138 | None:intergenic | 30.0% | |
| ! | TATTGTAGCTTTCTTTTACC+TGG | - | chr4_4:75556219-75556238 | None:intergenic | 30.0% |
| TATCAATGTTTCGTGTAACA+AGG | - | chr4_4:75556353-75556372 | None:intergenic | 30.0% | |
| CTAGTATCTAACTCTAATAG+AGG | - | chr4_4:75556702-75556721 | None:intergenic | 30.0% | |
| !!! | AACTTGAGTACTTGTTTTGT+TGG | + | chr4_4:75556743-75556762 | Msa0703550:intron | 30.0% |
| !! | AACTGCATGTTGAGTTTTAT+TGG | + | chr4_4:75556776-75556795 | Msa0703550:intron | 30.0% |
| GAATGACACATAGAAGAATT+AGG | - | chr4_4:75556933-75556952 | None:intergenic | 30.0% | |
| ! | GTACTAAATTAGTTTCGTCA+AGG | + | chr4_4:75557027-75557046 | Msa0703550:intron | 30.0% |
| ACTTATATCTCACTCATTCA+TGG | - | chr4_4:75557096-75557115 | None:intergenic | 30.0% | |
| TATTACTGCTTGTGAATAAC+TGG | + | chr4_4:75557130-75557149 | Msa0703550:intron | 30.0% | |
| ATTACTGCTTGTGAATAACT+GGG | + | chr4_4:75557131-75557150 | Msa0703550:intron | 30.0% | |
| TTGTCTTTCCTGTAAGATAA+GGG | - | chr4_4:75557171-75557190 | None:intergenic | 30.0% | |
| TTTGTCTTTCCTGTAAGATA+AGG | - | chr4_4:75557172-75557191 | None:intergenic | 30.0% | |
| GTTATGTATGGAAGAATAAG+GGG | - | chr4_4:75557251-75557270 | None:intergenic | 30.0% | |
| GGTTATGTATGGAAGAATAA+GGG | - | chr4_4:75557252-75557271 | None:intergenic | 30.0% | |
| TGGTTATGTATGGAAGAATA+AGG | - | chr4_4:75557253-75557272 | None:intergenic | 30.0% | |
| CATAACCAAGCAAATTATAC+AGG | + | chr4_4:75557265-75557284 | Msa0703550:CDS | 30.0% | |
| ! | TTATGGGTAAAGGTATGTAT+CGG | + | chr4_4:75557405-75557424 | Msa0703550:intron | 30.0% |
| ACAGATATGTCAATGTCAAT+GGG | - | chr4_4:75557458-75557477 | None:intergenic | 30.0% | |
| AACAGATATGTCAATGTCAA+TGG | - | chr4_4:75557459-75557478 | None:intergenic | 30.0% | |
| !! | ATTTAGGATTGAATTTTCCC+AGG | - | chr4_4:75557857-75557876 | None:intergenic | 30.0% |
| GAGTATGAGTACTAATACAA+AGG | - | chr4_4:75557938-75557957 | None:intergenic | 30.0% | |
| GTCAAAACAGAGAAAACGTT+TGG | + | chr4_4:75550617-75550636 | Msa0703550:CDS | 35.0% | |
| ! | AATTTTCGGAGGATAAGGAA+GGG | - | chr4_4:75550666-75550685 | None:intergenic | 35.0% |
| ! | TTGAGAATTTTCGGAGGATA+AGG | - | chr4_4:75550671-75550690 | None:intergenic | 35.0% |
| ! | AGTAGTTTGAGAATTTTCGG+AGG | - | chr4_4:75550677-75550696 | None:intergenic | 35.0% |
| ATGAATTGATCCCATTCTTG+TGG | - | chr4_4:75550772-75550791 | None:intergenic | 35.0% | |
| ATTCTAAATGATGCAGGCAA+TGG | - | chr4_4:75550811-75550830 | None:intergenic | 35.0% | |
| TGATGATATTCGTTCCCAAT+TGG | + | chr4_4:75550942-75550961 | Msa0703550:CDS | 35.0% | |
| ! | GCACGAAATCATTTTCCAAT+TGG | - | chr4_4:75550960-75550979 | None:intergenic | 35.0% |
| ! | CTTGGCATTCAAATTTTTCG+CGG | + | chr4_4:75551145-75551164 | Msa0703550:CDS | 35.0% |
| GCTTAGGAAGAATCAAACAT+TGG | + | chr4_4:75551173-75551192 | Msa0703550:CDS | 35.0% | |
| TTAAGGAAGGGAAGAACATT+TGG | - | chr4_4:75551424-75551443 | None:intergenic | 35.0% | |
| GTTCTTCCCTTCCTTAATAT+AGG | + | chr4_4:75551427-75551446 | Msa0703550:intron | 35.0% | |
| !!! | AAAATTCTGTTTTAGCGGGA+AGG | - | chr4_4:75551453-75551472 | None:intergenic | 35.0% |
| ! | TTCCCGCTAAAACAGAATTT+TGG | + | chr4_4:75551452-75551471 | Msa0703550:intron | 35.0% |
| !! | CTTAGTGTTTTGCTATCCAT+TGG | + | chr4_4:75551616-75551635 | Msa0703550:intron | 35.0% |
| !! | TGCTATCCATTGGTTTGAAA+TGG | + | chr4_4:75551626-75551645 | Msa0703550:intron | 35.0% |
| !! | GCTATCCATTGGTTTGAAAT+GGG | + | chr4_4:75551627-75551646 | Msa0703550:intron | 35.0% |
| !! | GATCTGTCCTTATTTCTACA+TGG | + | chr4_4:75551904-75551923 | Msa0703550:intron | 35.0% |
| TTACATATAGCCCTTGAAGT+TGG | + | chr4_4:75552057-75552076 | Msa0703550:intron | 35.0% | |
| TGAGAATTTAGCAGAATCAG+AGG | - | chr4_4:75552266-75552285 | None:intergenic | 35.0% | |
| TCTGATTCTGCTAAATTCTC+AGG | + | chr4_4:75552265-75552284 | Msa0703550:intron | 35.0% | |
| AAAAAGTAGCAGTAACCTAC+GGG | - | chr4_4:75552442-75552461 | None:intergenic | 35.0% | |
| TTGAAAGAAAAGTGAAGAGG+CGG | + | chr4_4:75552510-75552529 | Msa0703550:intron | 35.0% | |
| TGTTGCGTAGTGATAATCTA+CGG | + | chr4_4:75552594-75552613 | Msa0703550:intron | 35.0% | |
| TGAATGCACATCCAAGAATA+GGG | - | chr4_4:75552730-75552749 | None:intergenic | 35.0% | |
| GCTTACTGTCAAGTACAAAA+TGG | - | chr4_4:75552755-75552774 | None:intergenic | 35.0% | |
| GAACACGATCAAATAACAGT+TGG | - | chr4_4:75553279-75553298 | None:intergenic | 35.0% | |
| TTTACTTTCTGCAGGAATTC+AGG | + | chr4_4:75553426-75553445 | Msa0703550:intron | 35.0% | |
| TTACTTTCTGCAGGAATTCA+GGG | + | chr4_4:75553427-75553446 | Msa0703550:intron | 35.0% | |
| !!! | CAAGTTTTAATTGCTATGCG+AGG | + | chr4_4:75553474-75553493 | Msa0703550:CDS | 35.0% |
| CACAGTGAAAACACTAGATA+AGG | - | chr4_4:75553562-75553581 | None:intergenic | 35.0% | |
| TTCACTGTGCTCAAATTTGT+TGG | + | chr4_4:75553573-75553592 | Msa0703550:intron | 35.0% | |
| AACGAAATTTCTTGAGCAAG+AGG | - | chr4_4:75553654-75553673 | None:intergenic | 35.0% | |
| TTTATTGCAAATCTTCCTCG+AGG | + | chr4_4:75553722-75553741 | Msa0703550:intron | 35.0% | |
| ACGTAAGTCTAACCTGATAA+TGG | + | chr4_4:75553842-75553861 | Msa0703550:intron | 35.0% | |
| CGTAAGTCTAACCTGATAAT+GGG | + | chr4_4:75553843-75553862 | Msa0703550:intron | 35.0% | |
| TTTGTCATAGTTATCTGGCA+TGG | + | chr4_4:75553912-75553931 | Msa0703550:intron | 35.0% | |
| ! | TTCAGTTTTCACTCAATGGT+AGG | - | chr4_4:75554016-75554035 | None:intergenic | 35.0% |
| ! | GGTTTTCAGTTTTCACTCAA+TGG | - | chr4_4:75554020-75554039 | None:intergenic | 35.0% |
| TATAAGGAGCGGTATTAATC+TGG | - | chr4_4:75554133-75554152 | None:intergenic | 35.0% | |
| TTGTATAATGTTGAGCCTCA+AGG | + | chr4_4:75554172-75554191 | Msa0703550:intron | 35.0% | |
| TCCTATTGAAAATGAAGCTG+TGG | + | chr4_4:75554441-75554460 | Msa0703550:CDS | 35.0% | |
| ! | ACCACAGCTTCATTTTCAAT+AGG | - | chr4_4:75554445-75554464 | None:intergenic | 35.0% |
| GCACGGTATACTAATTTCTT+AGG | + | chr4_4:75554581-75554600 | Msa0703550:intron | 35.0% | |
| ! | TAGATTTTCATGTACTGGGT+CGG | - | chr4_4:75554693-75554712 | None:intergenic | 35.0% |
| ACCTGCAAAACAGTAAAAGA+GGG | - | chr4_4:75554751-75554770 | None:intergenic | 35.0% | |
| AACCTGCAAAACAGTAAAAG+AGG | - | chr4_4:75554752-75554771 | None:intergenic | 35.0% | |
| ! | TTACTGTTTTGCAGGTTTTG+CGG | + | chr4_4:75554755-75554774 | Msa0703550:intron | 35.0% |
| !!! | CTAAAGTTTTAGTGGATTCC+TGG | + | chr4_4:75554977-75554996 | Msa0703550:intron | 35.0% |
| TTTGCACTTGATTCAGCTTA+TGG | + | chr4_4:75555394-75555413 | Msa0703550:intron | 35.0% | |
| !!! | TTGTTTGATTTTTGAGGTGC+AGG | + | chr4_4:75555485-75555504 | Msa0703550:intron | 35.0% |
| TGGAAAGAATCACACTTCTA+CGG | - | chr4_4:75555560-75555579 | None:intergenic | 35.0% | |
| ! | ACTGGACTTTTGCTCATAAT+AGG | + | chr4_4:75555946-75555965 | Msa0703550:intron | 35.0% |
| GTTTCAGATGAATTCATGTG+CGG | - | chr4_4:75556042-75556061 | None:intergenic | 35.0% | |
| AACAATATCCTTGACTGACT+TGG | - | chr4_4:75556406-75556425 | None:intergenic | 35.0% | |
| TATTGTTGCGTTGAACTTCT+CGG | + | chr4_4:75556419-75556438 | Msa0703550:CDS | 35.0% | |
| !! | AGATGCCTGTATAATTTGCT+TGG | - | chr4_4:75557273-75557292 | None:intergenic | 35.0% |
| TATCGGTGATGAAGAAGAAA+AGG | + | chr4_4:75557422-75557441 | Msa0703550:intron | 35.0% | |
| ACATTGACATATCTGTTGAG+CGG | + | chr4_4:75557462-75557481 | Msa0703550:intron | 35.0% | |
| AAAGTCTTGCAAGCAATTCT+TGG | - | chr4_4:75557612-75557631 | None:intergenic | 35.0% | |
| ! | GCAAGACTTTTAATACGTCT+AGG | + | chr4_4:75557622-75557641 | Msa0703550:CDS | 35.0% |
| GACAATTCCTCTAACTATGT+TGG | + | chr4_4:75557673-75557692 | Msa0703550:CDS | 35.0% | |
| AATTCCTCTAACTATGTTGG+AGG | + | chr4_4:75557676-75557695 | Msa0703550:CDS | 35.0% | |
| TGCAGGGTTCACATAAATTT+AGG | - | chr4_4:75557873-75557892 | None:intergenic | 35.0% | |
| AAGGTCACGAACTCAAAGAA+AGG | + | chr4_4:75550588-75550607 | Msa0703550:CDS | 40.0% | |
| ! | GAATTTTCGGAGGATAAGGA+AGG | - | chr4_4:75550667-75550686 | None:intergenic | 40.0% |
| !!! | GAAGGGTTTTGAGTCAAGAA+AGG | - | chr4_4:75550712-75550731 | None:intergenic | 40.0% |
| GGTTATTTGTAGGTTGCTGA+AGG | + | chr4_4:75551072-75551091 | Msa0703550:intron | 40.0% | |
| TATTTGTAGGTTGCTGAAGG+AGG | + | chr4_4:75551075-75551094 | Msa0703550:intron | 40.0% | |
| GGAAGAATCAAACATTGGAG+AGG | + | chr4_4:75551178-75551197 | Msa0703550:CDS | 40.0% | |
| !!! | TTCCTGCTTTTTTCGCTTCT+CGG | + | chr4_4:75551276-75551295 | Msa0703550:intron | 40.0% |
| ! | AGTACTGAGTAGTGACAAAC+TGG | - | chr4_4:75551399-75551418 | None:intergenic | 40.0% |
| GGAAGGCCTATATTAAGGAA+GGG | - | chr4_4:75551436-75551455 | None:intergenic | 40.0% | |
| !! | CCATTGGTTTGAAATGGGAA+CGG | + | chr4_4:75551632-75551651 | Msa0703550:intron | 40.0% |
| TTAAACAATGCACGTGCATG+AGG | - | chr4_4:75551848-75551867 | None:intergenic | 40.0% | |
| TACATGGTATGACTTAGCTC+TGG | + | chr4_4:75551920-75551939 | Msa0703550:intron | 40.0% | |
| AATGACTCCTCCAACTTCAA+GGG | - | chr4_4:75552070-75552089 | None:intergenic | 40.0% | |
| TTGAAGTTGGAGGAGTCATT+GGG | + | chr4_4:75552070-75552089 | Msa0703550:intron | 40.0% | |
| AAGACAGGAAGCTGTTAGTA+TGG | + | chr4_4:75552332-75552351 | Msa0703550:CDS | 40.0% | |
| TGAAAGAAAAGTGAAGAGGC+GGG | + | chr4_4:75552511-75552530 | Msa0703550:intron | 40.0% | |
| GAATGCACATCCAAGAATAG+GGG | - | chr4_4:75552729-75552748 | None:intergenic | 40.0% | |
| CTGAATGCACATCCAAGAAT+AGG | - | chr4_4:75552731-75552750 | None:intergenic | 40.0% | |
| ACTTGACAGTAAGCTACTTC+TGG | + | chr4_4:75552761-75552780 | Msa0703550:intron | 40.0% | |
| ! | TCAGGACTGGTAAAAAACAG+AGG | - | chr4_4:75552799-75552818 | None:intergenic | 40.0% |
| TAAGCAAATCGAATCAGGAC+TGG | - | chr4_4:75552812-75552831 | None:intergenic | 40.0% | |
| ATACACCAATCCACAAAAGC+AGG | + | chr4_4:75552928-75552947 | Msa0703550:CDS | 40.0% | |
| ATGACACAAACCATTCCATC+AGG | - | chr4_4:75552961-75552980 | None:intergenic | 40.0% | |
| !! | AGTAACAATTAGGTTGGCTG+TGG | - | chr4_4:75553179-75553198 | None:intergenic | 40.0% |
| !!! | TTTTAGGGCTTGTCGTTGTT+AGG | + | chr4_4:75553521-75553540 | Msa0703550:intron | 40.0% |
| TGGTAATAGGCAATGAAGGT+TGG | + | chr4_4:75553615-75553634 | Msa0703550:intron | 40.0% | |
| TCTTGAGCAAGAGGTCAAAT+TGG | - | chr4_4:75553645-75553664 | None:intergenic | 40.0% | |
| ATTCTGAGTTGTCTTTCCCT+TGG | + | chr4_4:75553752-75553771 | Msa0703550:intron | 40.0% | |
| !!! | AAAGTTTTTAGGATGAGGGG+AGG | - | chr4_4:75553786-75553805 | None:intergenic | 40.0% |
| !! | CTTGACTCAGAAAAGTGCTT+TGG | + | chr4_4:75554523-75554542 | Msa0703550:intron | 40.0% |
| ATTAGTATACCGTGCTTCGA+AGG | - | chr4_4:75554576-75554595 | None:intergenic | 40.0% | |
| CCTGCAAAACAGTAAAAGAG+GGG | - | chr4_4:75554750-75554769 | None:intergenic | 40.0% | |
| AGCTTCCACAACTTATTCGT+CGG | + | chr4_4:75554818-75554837 | Msa0703550:CDS | 40.0% | |
| ACATGATATCCAGAAAACCC+AGG | - | chr4_4:75554998-75555017 | None:intergenic | 40.0% | |
| TTCATATAGGGCAGTAGTTG+TGG | + | chr4_4:75555117-75555136 | Msa0703550:intron | 40.0% | |
| TCATATAGGGCAGTAGTTGT+GGG | + | chr4_4:75555118-75555137 | Msa0703550:intron | 40.0% | |
| TAGTTGTGGGTAAAATACCC+TGG | + | chr4_4:75555131-75555150 | Msa0703550:intron | 40.0% | |
| TCAAAAGCTCGAATCAGAAG+AGG | - | chr4_4:75555172-75555191 | None:intergenic | 40.0% | |
| GAATCAAGTGCAAAACCAAC+AGG | - | chr4_4:75555388-75555407 | None:intergenic | 40.0% | |
| AGGTATATGACAAGAGCAGT+TGG | + | chr4_4:75555505-75555524 | Msa0703550:intron | 40.0% | |
| ATCACACTTCTACGGAACTT+GGG | - | chr4_4:75555552-75555571 | None:intergenic | 40.0% | |
| AATCACACTTCTACGGAACT+TGG | - | chr4_4:75555553-75555572 | None:intergenic | 40.0% | |
| CTTTCCAGTATGTTTCCTTC+TGG | + | chr4_4:75555573-75555592 | Msa0703550:CDS | 40.0% | |
| TTTGCCAGAAGGAAACATAC+TGG | - | chr4_4:75555580-75555599 | None:intergenic | 40.0% | |
| GGAAGATGACATTACTAGTG+TGG | + | chr4_4:75555641-75555660 | Msa0703550:CDS | 40.0% | |
| CTCACACACACTAAATAGTC+AGG | + | chr4_4:75555872-75555891 | Msa0703550:intron | 40.0% | |
| TTCCAGAATAGCTGCAAGAA+CGG | - | chr4_4:75555983-75556002 | None:intergenic | 40.0% | |
| TGCATCCCATACAGATGATT+TGG | + | chr4_4:75556110-75556129 | Msa0703550:CDS | 40.0% | |
| ! | GCTGTGTTTTGTGCATTATG+CGG | - | chr4_4:75556186-75556205 | None:intergenic | 40.0% |
| AGCTACAATATCAGGGCAAA+TGG | + | chr4_4:75556229-75556248 | Msa0703550:CDS | 40.0% | |
| ! | GATGAGCGTTTTCCATTTGA+TGG | + | chr4_4:75556324-75556343 | Msa0703550:CDS | 40.0% |
| GTAACAAGGTGACCATCAAA+TGG | - | chr4_4:75556339-75556358 | None:intergenic | 40.0% | |
| TCAGCAACTGAAAATGACCT+CGG | + | chr4_4:75556446-75556465 | Msa0703550:CDS | 40.0% | |
| CAAATAGCATGCACGTTACA+AGG | + | chr4_4:75556974-75556993 | Msa0703550:intron | 40.0% | |
| GTACTTTGCCCTTATCTTAC+AGG | + | chr4_4:75557160-75557179 | Msa0703550:intron | 40.0% | |
| AAGAATAAGGGGCAATCCTT+CGG | - | chr4_4:75557240-75557259 | None:intergenic | 40.0% | |
| ATAATAACCACGCAACAACC+AGG | - | chr4_4:75557389-75557408 | None:intergenic | 40.0% | |
| TGGTTGTTGCGTGGTTATTA+TGG | + | chr4_4:75557388-75557407 | Msa0703550:CDS | 40.0% | |
| GGTTGTTGCGTGGTTATTAT+GGG | + | chr4_4:75557389-75557408 | Msa0703550:CDS | 40.0% | |
| TGCGTGGTTATTATGGGTAA+AGG | + | chr4_4:75557395-75557414 | Msa0703550:CDS | 40.0% | |
| !! | TGTTGACTCGTCAACTTTGA+GGG | - | chr4_4:75557527-75557546 | None:intergenic | 40.0% |
| !! | TTGTTGACTCGTCAACTTTG+AGG | - | chr4_4:75557528-75557547 | None:intergenic | 40.0% |
| GACGAGTCAACAATAGCAAT+CGG | + | chr4_4:75557535-75557554 | Msa0703550:CDS | 40.0% | |
| ATACGTCTAGGCACAGAAAA+TGG | + | chr4_4:75557634-75557653 | Msa0703550:CDS | 40.0% | |
| TTCACCTCCAACATAGTTAG+AGG | - | chr4_4:75557683-75557702 | None:intergenic | 40.0% | |
| !!! | TGGTGATTTTTTCCTTCACC+TGG | + | chr4_4:75557836-75557855 | Msa0703550:three_prime_UTR | 40.0% |
| !!! | GGTGATTTTTTCCTTCACCT+GGG | + | chr4_4:75557837-75557856 | Msa0703550:three_prime_UTR | 40.0% |
| ! | GATTGAATTTTCCCAGGTGA+AGG | - | chr4_4:75557851-75557870 | None:intergenic | 40.0% |
| CTGTCTCAGTAACTAATGCA+GGG | - | chr4_4:75557889-75557908 | None:intergenic | 40.0% | |
| ACTGTCTCAGTAACTAATGC+AGG | - | chr4_4:75557890-75557909 | None:intergenic | 40.0% | |
| !! | CAAAGGAGTACTTAGAACCA+GGG | - | chr4_4:75557921-75557940 | None:intergenic | 40.0% |
| !! | ACAAAGGAGTACTTAGAACC+AGG | - | chr4_4:75557922-75557941 | None:intergenic | 40.0% |
| !! | CTGGTTTGATGATGCAGTTG+TGG | - | chr4_4:75550550-75550569 | None:intergenic | 45.0% |
| TCATCAAACCAGAGCAACCA+TGG | + | chr4_4:75550558-75550577 | Msa0703550:exon | 45.0% | |
| CATCAAACCAGAGCAACCAT+GGG | + | chr4_4:75550559-75550578 | Msa0703550:exon | 45.0% | |
| ATGATGCAGGCAATGGTGTT+CGG | - | chr4_4:75550804-75550823 | None:intergenic | 45.0% | |
| TGAATGCCAAGCAAAGTTCC+CGG | - | chr4_4:75551136-75551155 | None:intergenic | 45.0% | |
| ! | ATTTTTCGCGGATGCAGCTT+AGG | + | chr4_4:75551157-75551176 | Msa0703550:CDS | 45.0% |
| GGGAAGGCCTATATTAAGGA+AGG | - | chr4_4:75551437-75551456 | None:intergenic | 45.0% | |
| TAGCGGGAAGGCCTATATTA+AGG | - | chr4_4:75551441-75551460 | None:intergenic | 45.0% | |
| CCGTTCCCATTTCAAACCAA+TGG | - | chr4_4:75551635-75551654 | None:intergenic | 45.0% | |
| AATATCAGGGGATCTCAGTC+AGG | + | chr4_4:75551682-75551701 | Msa0703550:intron | 45.0% | |
| CATATAGCCCTTGAAGTTGG+AGG | + | chr4_4:75552060-75552079 | Msa0703550:intron | 45.0% | |
| CAATGACTCCTCCAACTTCA+AGG | - | chr4_4:75552071-75552090 | None:intergenic | 45.0% | |
| CTTGAAGTTGGAGGAGTCAT+TGG | + | chr4_4:75552069-75552088 | Msa0703550:intron | 45.0% | |
| ATAGGTTCCTCCCCTATTCT+TGG | + | chr4_4:75552716-75552735 | Msa0703550:intron | 45.0% | |
| GGTGTATAGTCTCGAGCAAT+TGG | - | chr4_4:75552915-75552934 | None:intergenic | 45.0% | |
| !! | GTGATCCTGCTTTTGTGGAT+TGG | - | chr4_4:75552936-75552955 | None:intergenic | 45.0% |
| CATGAAGCACAACATTTCCC+AGG | + | chr4_4:75553202-75553221 | Msa0703550:CDS | 45.0% | |
| ! | TTCCCAGGATGCCGTTTAAA+AGG | + | chr4_4:75553217-75553236 | Msa0703550:CDS | 45.0% |
| ! | TCCCAGGATGCCGTTTAAAA+GGG | + | chr4_4:75553218-75553237 | Msa0703550:CDS | 45.0% |
| ! | TCCCTTTTAAACGGCATCCT+GGG | - | chr4_4:75553222-75553241 | None:intergenic | 45.0% |
| ! | TTCCCTTTTAAACGGCATCC+TGG | - | chr4_4:75553223-75553242 | None:intergenic | 45.0% |
| AGTGTACCATCTCCACTACA+CGG | - | chr4_4:75553313-75553332 | None:intergenic | 45.0% | |
| TGGAGATGGTACACTTCGTA+AGG | + | chr4_4:75553318-75553337 | Msa0703550:CDS | 45.0% | |
| ! | TTCGTAAGGCACCTGATATG+TGG | + | chr4_4:75553332-75553351 | Msa0703550:CDS | 45.0% |
| TACCATTTCCGCCACATATC+AGG | - | chr4_4:75553346-75553365 | None:intergenic | 45.0% | |
| TTTCTGCAGGAATTCAGGGA+TGG | + | chr4_4:75553431-75553450 | Msa0703550:intron | 45.0% | |
| TTCTGCAGGAATTCAGGGAT+GGG | + | chr4_4:75553432-75553451 | Msa0703550:intron | 45.0% | |
| TTGCAAATCTTCCTCGAGGT+TGG | + | chr4_4:75553726-75553745 | Msa0703550:intron | 45.0% | |
| TGCAAATCTTCCTCGAGGTT+GGG | + | chr4_4:75553727-75553746 | Msa0703550:intron | 45.0% | |
| AGTTATCTGGCATGGCGAAT+TGG | + | chr4_4:75553920-75553939 | Msa0703550:intron | 45.0% | |
| ACTCAAAATCGGGGGAAGAA+TGG | + | chr4_4:75554396-75554415 | Msa0703550:CDS | 45.0% | |
| AAATGAAGCTGTGGTTGCAG+AGG | + | chr4_4:75554450-75554469 | Msa0703550:CDS | 45.0% | |
| CGTGCTTCGAAGGTAATTAG+CGG | - | chr4_4:75554566-75554585 | None:intergenic | 45.0% | |
| CGCTAATTACCTTCGAAGCA+CGG | + | chr4_4:75554564-75554583 | Msa0703550:intron | 45.0% | |
| ! | CCCCTCTTTTACTGTTTTGC+AGG | + | chr4_4:75554747-75554766 | Msa0703550:intron | 45.0% |
| ACCTTCCATTTCTTGAGACC+TGG | - | chr4_4:75554844-75554863 | None:intergenic | 45.0% | |
| !!! | TAGTGGATTCCTGGGTTTTC+TGG | + | chr4_4:75554986-75555005 | Msa0703550:intron | 45.0% |
| ! | TCAGAAGAGGCATAACTACC+AGG | - | chr4_4:75555159-75555178 | None:intergenic | 45.0% |
| GCGAGGTTACATGCTAAAGT+TGG | - | chr4_4:75555364-75555383 | None:intergenic | 45.0% | |
| ACGGAACTTGGGAACATCTT+TGG | - | chr4_4:75555541-75555560 | None:intergenic | 45.0% | |
| TCCTTCTGGCAAATGCTATC+AGG | + | chr4_4:75555587-75555606 | Msa0703550:CDS | 45.0% | |
| TCCTGATAGCATTTGCCAGA+AGG | - | chr4_4:75555591-75555610 | None:intergenic | 45.0% | |
| GGCAAATGCTATCAGGATCT+TGG | + | chr4_4:75555594-75555613 | Msa0703550:CDS | 45.0% | |
| AGCACTAGAGAATCCTGTGA+TGG | + | chr4_4:75555692-75555711 | Msa0703550:CDS | 45.0% | |
| ACTAGAGAATCCTGTGATGG+AGG | + | chr4_4:75555695-75555714 | Msa0703550:CDS | 45.0% | |
| !! | TTCCTCTAGAGCATTGCATG+AGG | + | chr4_4:75555742-75555761 | Msa0703550:CDS | 45.0% |
| ATCCTCATGCAATGCTCTAG+AGG | - | chr4_4:75555747-75555766 | None:intergenic | 45.0% | |
| ATGCCTCATGATCAGAACAC+TGG | + | chr4_4:75555768-75555787 | Msa0703550:CDS | 45.0% | |
| TTGCAGCACAGCAATGAAGA+AGG | - | chr4_4:75555796-75555815 | None:intergenic | 45.0% | |
| CAAAAAGTTTCTCCTCTGCC+AGG | + | chr4_4:75555813-75555832 | Msa0703550:CDS | 45.0% | |
| TTCCGTTCTTGCAGCTATTC+TGG | + | chr4_4:75555978-75555997 | Msa0703550:intron | 45.0% | |
| ACCTAGCAAACAGAGTCTTG+AGG | + | chr4_4:75556005-75556024 | Msa0703550:CDS | 45.0% | |
| TCCTCAAGACTCTGTTTGCT+AGG | - | chr4_4:75556009-75556028 | None:intergenic | 45.0% | |
| GTCCTCTAACACGTGAAGAA+CGG | + | chr4_4:75556139-75556158 | Msa0703550:CDS | 45.0% | |
| TTCCGTTCTTCACGTGTTAG+AGG | - | chr4_4:75556144-75556163 | None:intergenic | 45.0% | |
| ACGTGAAGAACGGAATTCTG+AGG | + | chr4_4:75556149-75556168 | Msa0703550:CDS | 45.0% | |
| TGCACAAAACACAGCAGAGA+AGG | + | chr4_4:75556191-75556210 | Msa0703550:CDS | 45.0% | |
| CAATATCAGGGCAAATGGAG+AGG | + | chr4_4:75556234-75556253 | Msa0703550:CDS | 45.0% | |
| CTATGTCTCCAAGTCAGTCA+AGG | + | chr4_4:75556395-75556414 | Msa0703550:CDS | 45.0% | |
| CAACTGAAAATGACCTCGGT+TGG | + | chr4_4:75556450-75556469 | Msa0703550:CDS | 45.0% | |
| AAACATCTTCATGCCAACCG+AGG | - | chr4_4:75556466-75556485 | None:intergenic | 45.0% | |
| GAAAGACAAACAGCACGAGA+AGG | + | chr4_4:75557182-75557201 | Msa0703550:CDS | 45.0% | |
| ! | GATGATATCCGGAAAGCACA+TGG | - | chr4_4:75557218-75557237 | None:intergenic | 45.0% |
| GCAATCCTTCGGATGATATC+CGG | - | chr4_4:75557229-75557248 | None:intergenic | 45.0% | |
| AATTATACAGGCATCTCCCG+AGG | + | chr4_4:75557277-75557296 | Msa0703550:CDS | 45.0% | |
| ! | GATTTTGCTGATGCCGAGTT+TGG | + | chr4_4:75557341-75557360 | Msa0703550:CDS | 45.0% |
| ! | TGATGCCGAGTTTGGTGAAA+AGG | + | chr4_4:75557349-75557368 | Msa0703550:CDS | 45.0% |
| ! | TGCTGCCTTTTCACCAAACT+CGG | - | chr4_4:75557357-75557376 | None:intergenic | 45.0% |
| AAGGCAGCAAACTTATTGCC+TGG | + | chr4_4:75557368-75557387 | Msa0703550:CDS | 45.0% | |
| ! | CGGCATTTTCCTTTTCTGCA+GGG | + | chr4_4:75557482-75557501 | Msa0703550:intron | 45.0% |
| AACTGGATTCCCTGCAGAAA+AGG | - | chr4_4:75557494-75557513 | None:intergenic | 45.0% | |
| TTGAGGGATTCTGTTGCAAC+TGG | - | chr4_4:75557511-75557530 | None:intergenic | 45.0% | |
| CAACAATAGCAATCGGATGC+TGG | + | chr4_4:75557542-75557561 | Msa0703550:CDS | 45.0% | |
| AATAGCAATCGGATGCTGGA+GGG | + | chr4_4:75557546-75557565 | Msa0703550:CDS | 45.0% | |
| GCACAGAAAATGGCTCTTCT+GGG | + | chr4_4:75557644-75557663 | Msa0703550:CDS | 45.0% | |
| AAAGCTGCTGTGAGTTAGAG+AGG | + | chr4_4:75557748-75557767 | Msa0703550:exon | 45.0% | |
| AAGCTGCTGTGAGTTAGAGA+GGG | + | chr4_4:75557749-75557768 | Msa0703550:exon | 45.0% | |
| TACTTAGAACCAGGGAGTCA+GGG | - | chr4_4:75557913-75557932 | None:intergenic | 45.0% | |
| ! | AACCTCGTCGTTAGTTTCGA+AGG | + | chr4_4:75558084-75558103 | Msa0703550:three_prime_UTR | 45.0% |
| !!! | AATATTTTACATATATTTTA+GGG | + | chr4_4:75553506-75553525 | Msa0703550:intron | 5.0% |
| GATAAGGAAGGGTCTGGATC+TGG | - | chr4_4:75550655-75550674 | None:intergenic | 50.0% | |
| GAATGCCAAGCAAAGTTCCC+GGG | - | chr4_4:75551135-75551154 | None:intergenic | 50.0% | |
| CTCCGAGAAGCGAAAAAAGC+AGG | - | chr4_4:75551281-75551300 | None:intergenic | 50.0% | |
| TGGGAACGGAGTTGACAAGT+TGG | + | chr4_4:75551646-75551665 | Msa0703550:intron | 50.0% | |
| ACAATGCACGTGCATGAGGA+TGG | - | chr4_4:75551844-75551863 | None:intergenic | 50.0% | |
| CTGAATGGTTCAGTACCCGT+AGG | + | chr4_4:75552424-75552443 | Msa0703550:intron | 50.0% | |
| TGCACATCCAAGAATAGGGG+AGG | - | chr4_4:75552726-75552745 | None:intergenic | 50.0% | |
| !! | GTTTTAGTGTGTGCTGCACC+AGG | + | chr4_4:75552877-75552896 | Msa0703550:intron | 50.0% |
| !! | AGGCAGTGATCCTGCTTTTG+TGG | - | chr4_4:75552941-75552960 | None:intergenic | 50.0% |
| AAAGCAGGATCACTGCCTGA+TGG | + | chr4_4:75552943-75552962 | Msa0703550:CDS | 50.0% | |
| AGGATCACTGCCTGATGGAA+TGG | + | chr4_4:75552948-75552967 | Msa0703550:CDS | 50.0% | |
| GTGTACCATCTCCACTACAC+GGG | - | chr4_4:75553312-75553331 | None:intergenic | 50.0% | |
| ! | GTAAGGCACCTGATATGTGG+CGG | + | chr4_4:75553335-75553354 | Msa0703550:CDS | 50.0% |
| ! | CACCTGATATGTGGCGGAAA+TGG | + | chr4_4:75553341-75553360 | Msa0703550:CDS | 50.0% |
| AGGAATTCAGGGATGGGACA+AGG | + | chr4_4:75553438-75553457 | Msa0703550:intron | 50.0% | |
| GGAATTCAGGGATGGGACAA+GGG | + | chr4_4:75553439-75553458 | Msa0703550:intron | 50.0% | |
| GCAAATCTTCCTCGAGGTTG+GGG | + | chr4_4:75553728-75553747 | Msa0703550:intron | 50.0% | |
| CAAATCTTCCTCGAGGTTGG+GGG | + | chr4_4:75553729-75553748 | Msa0703550:intron | 50.0% | |
| AGGGGAGGCTATCATTCCAA+GGG | - | chr4_4:75553771-75553790 | None:intergenic | 50.0% | |
| TTGAGCCTCAAGGAGTAGAG+TGG | + | chr4_4:75554182-75554201 | Msa0703550:intron | 50.0% | |
| AGTCAAGCCTGCAACTAGCA+GGG | - | chr4_4:75554510-75554529 | None:intergenic | 50.0% | |
| ! | CTGTTTTGCAGGTTTTGCGG+AGG | + | chr4_4:75554758-75554777 | Msa0703550:intron | 50.0% |
| GCCAGGTCTCAAGAAATGGA+AGG | + | chr4_4:75554840-75554859 | Msa0703550:CDS | 50.0% | |
| GCTCCAGTGTTCTGATCATG+AGG | - | chr4_4:75555774-75555793 | None:intergenic | 50.0% | |
| CATATGAGACTACCTGGCAG+AGG | - | chr4_4:75555828-75555847 | None:intergenic | 50.0% | |
| TGTGTGAGAGAGAGAGAGAG+AGG | - | chr4_4:75555860-75555879 | None:intergenic | 50.0% | |
| AGTCGTCAAAGCAGTTCCAG+AGG | + | chr4_4:75556071-75556090 | Msa0703550:CDS | 50.0% | |
| AACACAGCAGAGAAGGTTCC+AGG | + | chr4_4:75556198-75556217 | Msa0703550:CDS | 50.0% | |
| GTTGCGTTGAACTTCTCGGT+TGG | + | chr4_4:75556423-75556442 | Msa0703550:CDS | 50.0% | |
| AGACAAACAGCACGAGAAGG+TGG | + | chr4_4:75557185-75557204 | Msa0703550:CDS | 50.0% | |
| GCTCTTCACCATGTGCTTTC+CGG | + | chr4_4:75557207-75557226 | Msa0703550:CDS | 50.0% | |
| GCTTTCCGGATATCATCCGA+AGG | + | chr4_4:75557221-75557240 | Msa0703550:CDS | 50.0% | |
| AGAAGACGCTTGAAGTCCTC+GGG | - | chr4_4:75557296-75557315 | None:intergenic | 50.0% | |
| CAGAAGACGCTTGAAGTCCT+CGG | - | chr4_4:75557297-75557316 | None:intergenic | 50.0% | |
| CTTATTGCCTGGTTGTTGCG+TGG | + | chr4_4:75557379-75557398 | Msa0703550:CDS | 50.0% | |
| ! | GCGGCATTTTCCTTTTCTGC+AGG | + | chr4_4:75557481-75557500 | Msa0703550:intron | 50.0% |
| CAATAGCAATCGGATGCTGG+AGG | + | chr4_4:75557545-75557564 | Msa0703550:CDS | 50.0% | |
| ATAGCAATCGGATGCTGGAG+GGG | + | chr4_4:75557547-75557566 | Msa0703550:CDS | 50.0% | |
| GTCCATTGCAGAGACCATCA+CGG | - | chr4_4:75557587-75557606 | None:intergenic | 50.0% | |
| GGCACAGAAAATGGCTCTTC+TGG | + | chr4_4:75557643-75557662 | Msa0703550:CDS | 50.0% | |
| AGAAAATGGCTCTTCTGGGC+AGG | + | chr4_4:75557648-75557667 | Msa0703550:CDS | 50.0% | |
| CTATGTTGGAGGTGAAGCAC+AGG | + | chr4_4:75557687-75557706 | Msa0703550:CDS | 50.0% | |
| GTACTTAGAACCAGGGAGTC+AGG | - | chr4_4:75557914-75557933 | None:intergenic | 50.0% | |
| TGCCTTCGAAACTAACGACG+AGG | - | chr4_4:75558089-75558108 | None:intergenic | 50.0% | |
| ! | GATGCAGTTGTGGCGCGTTT+TGG | - | chr4_4:75550540-75550559 | None:intergenic | 55.0% |
| ACCAGAGCAACCATGGGTAG+AGG | + | chr4_4:75550565-75550584 | Msa0703550:exon | 55.0% | |
| TCCTCTACCCATGGTTGCTC+TGG | - | chr4_4:75550569-75550588 | None:intergenic | 55.0% | |
| GAGCAACCATGGGTAGAGGA+AGG | + | chr4_4:75550569-75550588 | Msa0703550:exon | 55.0% | |
| TCGTGACCTTCCTCTACCCA+TGG | - | chr4_4:75550578-75550597 | None:intergenic | 55.0% | |
| TCGGAGGATAAGGAAGGGTC+TGG | - | chr4_4:75550661-75550680 | None:intergenic | 55.0% | |
| TGCTGAAGGAGGTGAGACAG+AGG | + | chr4_4:75551086-75551105 | Msa0703550:CDS | 55.0% | |
| GAGGTGAGACAGAGGCGATT+CGG | + | chr4_4:75551094-75551113 | Msa0703550:CDS | 55.0% | |
| GCAAAGTTCCCGGGATACCA+GGG | - | chr4_4:75551126-75551145 | None:intergenic | 55.0% | |
| AGCAAAGTTCCCGGGATACC+AGG | - | chr4_4:75551127-75551146 | None:intergenic | 55.0% | |
| GGTATCCCGGGAACTTTGCT+TGG | + | chr4_4:75551127-75551146 | Msa0703550:CDS | 55.0% | |
| ! | GATGTCCCGTGTAGTGGAGA+TGG | + | chr4_4:75553304-75553323 | Msa0703550:CDS | 55.0% |
| TTTGTATCCCCTGCGAGCAG+AGG | - | chr4_4:75553700-75553719 | None:intergenic | 55.0% | |
| GAGGGGAGGCTATCATTCCA+AGG | - | chr4_4:75553772-75553791 | None:intergenic | 55.0% | |
| AGCTGCCACTCTACTCCTTG+AGG | - | chr4_4:75554190-75554209 | None:intergenic | 55.0% | |
| TGTGAAGCCCTGCTAGTTGC+AGG | + | chr4_4:75554500-75554519 | Msa0703550:intron | 55.0% | |
| GAGTCAAGCCTGCAACTAGC+AGG | - | chr4_4:75554511-75554530 | None:intergenic | 55.0% | |
| ! | TTGCAGGTTTTGCGGAGGTG+TGG | + | chr4_4:75554763-75554782 | Msa0703550:intron | 55.0% |
| CCTGGCCGACGAATAAGTTG+TGG | - | chr4_4:75554826-75554845 | None:intergenic | 55.0% | |
| CCACAACTTATTCGTCGGCC+AGG | + | chr4_4:75554823-75554842 | Msa0703550:CDS | 55.0% | |
| GTCGGCCAGGTCTCAAGAAA+TGG | + | chr4_4:75554836-75554855 | Msa0703550:CDS | 55.0% | |
| GGGTAAAATACCCTGGAGCC+TGG | + | chr4_4:75555138-75555157 | Msa0703550:intron | 55.0% | |
| GGCATAACTACCAGGCTCCA+GGG | - | chr4_4:75555151-75555170 | None:intergenic | 55.0% | |
| AGGCATAACTACCAGGCTCC+AGG | - | chr4_4:75555152-75555171 | None:intergenic | 55.0% | |
| GCATGTAACCTCGCACCTGT+TGG | + | chr4_4:75555370-75555389 | Msa0703550:intron | 55.0% | |
| GTGCAAAACCAACAGGTGCG+AGG | - | chr4_4:75555381-75555400 | None:intergenic | 55.0% | |
| TCAGCAGACTCCTCCATCAC+AGG | - | chr4_4:75555708-75555727 | None:intergenic | 55.0% | |
| ! | TGTGATGGAGGAGTCTGCTG+AGG | + | chr4_4:75555707-75555726 | Msa0703550:CDS | 55.0% |
| GGACTTCAAGCGTCTTCTGC+AGG | + | chr4_4:75557298-75557317 | Msa0703550:CDS | 55.0% | |
| AATCGGATGCTGGAGGGGTA+GGG | + | chr4_4:75557552-75557571 | Msa0703550:CDS | 55.0% | |
| GTCCGTGATGGTCTCTGCAA+TGG | + | chr4_4:75557582-75557601 | Msa0703550:CDS | 55.0% | |
| AAATGGCTCTTCTGGGCAGG+TGG | + | chr4_4:75557651-75557670 | Msa0703550:CDS | 55.0% | |
| AGGTGAAGCACAGGCTGTAC+AGG | + | chr4_4:75557696-75557715 | Msa0703550:CDS | 55.0% | |
| CGTGCATTCACTTCGCGCTG+AGG | + | chr4_4:75550975-75550994 | Msa0703550:CDS | 60.0% | |
| TTCCCGGGATACCAGGGCAA+AGG | - | chr4_4:75551120-75551139 | None:intergenic | 60.0% | |
| CTGTGCGATGTCCCGTGTAG+TGG | + | chr4_4:75553298-75553317 | Msa0703550:CDS | 60.0% | |
| CTCAGAATCCCCCAACCTCG+AGG | - | chr4_4:75553740-75553759 | None:intergenic | 60.0% | |
| CAATCGGATGCTGGAGGGGT+AGG | + | chr4_4:75557551-75557570 | Msa0703550:CDS | 60.0% | |
| TAGGGCGAGGTTGTCCGTGA+TGG | + | chr4_4:75557570-75557589 | Msa0703550:CDS | 60.0% | |
| TGAGACAGTCCCTGACTCCC+TGG | + | chr4_4:75557901-75557920 | Msa0703550:three_prime_UTR | 60.0% | |
| ! | AGGCGATTCGGCCTTTGCCC+TGG | + | chr4_4:75551106-75551125 | Msa0703550:CDS | 65.0% |
| CGGCCTTTGCCCTGGTATCC+CGG | + | chr4_4:75551114-75551133 | Msa0703550:CDS | 65.0% | |
| GGCCTTTGCCCTGGTATCCC+GGG | + | chr4_4:75551115-75551134 | Msa0703550:CDS | 65.0% | |
| TCCTGGCGTCCTCTGCTCGC+AGG | + | chr4_4:75553688-75553707 | Msa0703550:intron | 70.0% | |
| CCTGGCGTCCTCTGCTCGCA+GGG | + | chr4_4:75553689-75553708 | Msa0703550:intron | 70.0% | |
| CTGGCGTCCTCTGCTCGCAG+GGG | + | chr4_4:75553690-75553709 | Msa0703550:intron | 70.0% | |
| GATGCTGGAGGGGTAGGGCG+AGG | + | chr4_4:75557557-75557576 | Msa0703550:CDS | 70.0% | |
| CCCTGCGAGCAGAGGACGCC+AGG | - | chr4_4:75553692-75553711 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 75550531 | 75558138 | 75550531 | ID=Msa0703550;Name=Msa0703550 |
| chr4_4 | mRNA | 75550531 | 75558138 | 75550531 | ID=Msa0703550-mRNA-1;Parent=Msa0703550;Name=Msa0703550-mRNA-1;_AED=0.06;_eAED=0.06;_QI=46|1|1|1|1|1|14|373|817 |
| chr4_4 | exon | 75550531 | 75550839 | 75550531 | ID=Msa0703550-mRNA-1:exon:23690;Parent=Msa0703550-mRNA-1 |
| chr4_4 | exon | 75550930 | 75550996 | 75550930 | ID=Msa0703550-mRNA-1:exon:23691;Parent=Msa0703550-mRNA-1 |
| chr4_4 | exon | 75551084 | 75551199 | 75551084 | ID=Msa0703550-mRNA-1:exon:23692;Parent=Msa0703550-mRNA-1 |
| chr4_4 | exon | 75552287 | 75552353 | 75552287 | ID=Msa0703550-mRNA-1:exon:23693;Parent=Msa0703550-mRNA-1 |
| chr4_4 | exon | 75552720 | 75552768 | 75552720 | ID=Msa0703550-mRNA-1:exon:23694;Parent=Msa0703550-mRNA-1 |
| chr4_4 | exon | 75552884 | 75552969 | 75552884 | ID=Msa0703550-mRNA-1:exon:23695;Parent=Msa0703550-mRNA-1 |
| chr4_4 | exon | 75553112 | 75553362 | 75553112 | ID=Msa0703550-mRNA-1:exon:23696;Parent=Msa0703550-mRNA-1 |
| chr4_4 | exon | 75553440 | 75553495 | 75553440 | ID=Msa0703550-mRNA-1:exon:23697;Parent=Msa0703550-mRNA-1 |
| chr4_4 | exon | 75554386 | 75554471 | 75554386 | ID=Msa0703550-mRNA-1:exon:23698;Parent=Msa0703550-mRNA-1 |
| chr4_4 | exon | 75554769 | 75554861 | 75554769 | ID=Msa0703550-mRNA-1:exon:23699;Parent=Msa0703550-mRNA-1 |
| chr4_4 | exon | 75555507 | 75555834 | 75555507 | ID=Msa0703550-mRNA-1:exon:23700;Parent=Msa0703550-mRNA-1 |
| chr4_4 | exon | 75555992 | 75556485 | 75555992 | ID=Msa0703550-mRNA-1:exon:23701;Parent=Msa0703550-mRNA-1 |
| chr4_4 | exon | 75557182 | 75557416 | 75557182 | ID=Msa0703550-mRNA-1:exon:23702;Parent=Msa0703550-mRNA-1 |
| chr4_4 | exon | 75557503 | 75558138 | 75557503 | ID=Msa0703550-mRNA-1:exon:23703;Parent=Msa0703550-mRNA-1 |
| chr4_4 | five_prime_UTR | 75550531 | 75550576 | 75550531 | ID=Msa0703550-mRNA-1:five_prime_utr;Parent=Msa0703550-mRNA-1 |
| chr4_4 | CDS | 75550577 | 75550839 | 75550577 | ID=Msa0703550-mRNA-1:cds;Parent=Msa0703550-mRNA-1 |
| chr4_4 | CDS | 75550930 | 75550996 | 75550930 | ID=Msa0703550-mRNA-1:cds;Parent=Msa0703550-mRNA-1 |
| chr4_4 | CDS | 75551084 | 75551199 | 75551084 | ID=Msa0703550-mRNA-1:cds;Parent=Msa0703550-mRNA-1 |
| chr4_4 | CDS | 75552287 | 75552353 | 75552287 | ID=Msa0703550-mRNA-1:cds;Parent=Msa0703550-mRNA-1 |
| chr4_4 | CDS | 75552720 | 75552768 | 75552720 | ID=Msa0703550-mRNA-1:cds;Parent=Msa0703550-mRNA-1 |
| chr4_4 | CDS | 75552884 | 75552969 | 75552884 | ID=Msa0703550-mRNA-1:cds;Parent=Msa0703550-mRNA-1 |
| chr4_4 | CDS | 75553112 | 75553362 | 75553112 | ID=Msa0703550-mRNA-1:cds;Parent=Msa0703550-mRNA-1 |
| chr4_4 | CDS | 75553440 | 75553495 | 75553440 | ID=Msa0703550-mRNA-1:cds;Parent=Msa0703550-mRNA-1 |
| chr4_4 | CDS | 75554386 | 75554471 | 75554386 | ID=Msa0703550-mRNA-1:cds;Parent=Msa0703550-mRNA-1 |
| chr4_4 | CDS | 75554769 | 75554861 | 75554769 | ID=Msa0703550-mRNA-1:cds;Parent=Msa0703550-mRNA-1 |
| chr4_4 | CDS | 75555507 | 75555834 | 75555507 | ID=Msa0703550-mRNA-1:cds;Parent=Msa0703550-mRNA-1 |
| chr4_4 | CDS | 75555992 | 75556485 | 75555992 | ID=Msa0703550-mRNA-1:cds;Parent=Msa0703550-mRNA-1 |
| chr4_4 | CDS | 75557182 | 75557416 | 75557182 | ID=Msa0703550-mRNA-1:cds;Parent=Msa0703550-mRNA-1 |
| chr4_4 | CDS | 75557503 | 75557765 | 75557503 | ID=Msa0703550-mRNA-1:cds;Parent=Msa0703550-mRNA-1 |
| chr4_4 | three_prime_UTR | 75557766 | 75558138 | 75557766 | ID=Msa0703550-mRNA-1:three_prime_utr;Parent=Msa0703550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
