AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0772740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0772740 MtrunA17_Chr5g0402681 87.775 818 98 1 1 818 1 816 0.0 1453
Msa0772740 MtrunA17_Chr5g0402721 82.906 819 125 3 1 818 1 805 0.0 1359
Msa0772740 MtrunA17_Chr5g0402671 76.739 834 173 6 1 818 1 829 0.0 1280
Msa0772740 MtrunA17_Chr5g0402771 74.732 839 188 8 1 818 1 836 0.0 1226
Msa0772740 MtrunA17_Chr8g0374351 55.347 692 294 11 134 818 75 758 0.0 684
Msa0772740 MtrunA17_Chr8g0374541 49.015 812 393 11 13 814 17 817 0.0 679
Msa0772740 MtrunA17_Chr8g0374531 49.369 792 355 11 39 813 44 806 0.0 674
Msa0772740 MtrunA17_Chr8g0374511 50.000 788 330 13 39 813 44 780 0.0 663
Msa0772740 MtrunA17_Chr8g0374461 55.022 687 297 9 137 818 94 773 0.0 659
Msa0772740 MtrunA17_Chr8g0374471 50.128 780 364 12 39 813 45 804 0.0 652
Msa0772740 MtrunA17_Chr8g0374561 45.355 818 398 19 7 806 12 798 0.0 619
Msa0772740 MtrunA17_Chr8g0374551 43.240 821 413 22 5 806 6 792 0.0 606
Msa0772740 MtrunA17_Chr8g0374291 45.749 835 394 21 9 814 8 812 0.0 603
Msa0772740 MtrunA17_Chr8g0374301 43.818 833 402 21 1 799 1 801 0.0 599
Msa0772740 MtrunA17_Chr5g0403291 62.338 385 93 2 121 453 1 385 4.22e-149 447
Msa0772740 MtrunA17_Chr8g0374491 53.947 456 199 7 361 813 4 451 3.68e-145 435
Msa0772740 MtrunA17_Chr1g0153991 34.215 643 381 14 181 814 213 822 1.72e-108 351
Msa0772740 MtrunA17_Chr1g0153981 33.588 655 387 14 170 813 205 822 6.04e-107 347
Msa0772740 MtrunA17_Chr5g0402701 51.321 265 123 4 19 281 23 283 8.35e-67 230
Msa0772740 MtrunA17_Chr5g0402761 47.231 307 121 12 1 284 1 289 5.04e-60 205
Msa0772740 MtrunA17_Chr7g0223451 50.273 183 87 2 419 601 7 185 3.77e-47 166
Msa0772740 MtrunA17_Chr5g0402751 71.875 96 25 2 332 427 88 181 1.76e-37 139
Msa0772740 MtrunA17_Chr5g0402751 59.302 86 32 2 111 195 4 87 4.04e-21 92.0
Msa0772740 MtrunA17_Chr7g0223441 48.889 135 64 3 681 814 2 132 3.56e-31 118
Msa0772740 MtrunA17_Chr1g0189551 24.430 790 451 33 16 762 61 747 5.37e-23 105
Msa0772740 MtrunA17_Chr5g0404741 26.603 624 369 25 170 750 191 768 5.81e-23 105
Msa0772740 MtrunA17_Chr5g0402741 82.692 52 9 0 516 567 2 53 1.28e-22 91.7
Msa0772740 MtrunA17_Chr1g0159111 23.499 583 371 17 150 704 154 689 2.56e-22 103
Msa0772740 MtrunA17_Chr6g0454971 23.286 700 423 24 116 796 195 799 1.98e-20 97.1
Msa0772740 MtrunA17_Chr6g0454831 23.916 669 348 25 170 796 209 758 1.47e-19 94.4
Msa0772740 MtrunA17_Chr5g0410031 27.424 361 231 13 146 484 160 511 3.67e-19 93.2
Msa0772740 MtrunA17_Chr3g0107211 24.757 618 332 27 149 740 148 658 4.16e-19 93.2
Msa0772740 MtrunA17_Chr2g0299841 24.575 647 388 28 168 791 254 823 1.01e-18 91.7
Msa0772740 MtrunA17_Chr6g0454951 23.977 709 394 30 99 770 222 822 2.58e-18 90.5
Msa0772740 MtrunA17_Chr3g0105571 26.506 498 286 19 164 634 112 556 2.68e-18 89.4
Msa0772740 MtrunA17_Chr7g0248221 25.722 727 403 32 126 761 143 823 6.62e-18 89.0
Msa0772740 MtrunA17_Chr2g0299881 24.379 644 353 30 166 768 215 765 1.78e-17 87.8
Msa0772740 MtrunA17_Chr4g0005291 24.292 671 399 30 150 766 246 861 2.53e-17 87.0
Msa0772740 MtrunA17_Chr3g0101201 23.498 749 429 32 131 814 160 829 2.85e-17 87.0
Msa0772740 MtrunA17_Chr4g0009041 22.492 658 378 27 166 796 710 1262 3.50e-17 87.0
Msa0772740 MtrunA17_Chr2g0319851 23.744 657 400 27 148 765 226 820 4.00e-17 86.7
Msa0772740 MtrunA17_Chr2g0319851 27.143 210 116 5 618 800 701 900 1.93e-11 68.2
Msa0772740 MtrunA17_Chr4g0009101 22.888 651 378 25 170 796 744 1294 8.04e-17 85.9
Msa0772740 MtrunA17_Chr5g0403281 60.870 69 23 1 1 65 1 69 8.36e-17 75.9
Msa0772740 MtrunA17_Chr4g0048471 24.174 484 311 19 148 603 26 481 1.30e-16 84.7
Msa0772740 MtrunA17_Chr7g0248511 25.040 631 353 24 181 765 235 791 1.37e-16 84.7
Msa0772740 MtrunA17_Chr7g0248511 23.937 635 345 23 207 775 262 824 5.22e-15 79.7
Msa0772740 MtrunA17_Chr6g0454821 23.700 654 368 29 170 796 250 799 1.42e-16 84.7
Msa0772740 MtrunA17_Chr6g0455191 23.421 649 377 28 170 796 517 1067 1.43e-16 84.7
Msa0772740 MtrunA17_Chr5g0429961 29.048 420 240 19 88 475 99 492 1.50e-16 84.7
Msa0772740 MtrunA17_Chr8g0363851 25.000 688 407 31 162 786 22 663 2.24e-16 84.3
Msa0772740 MtrunA17_Chr6g0480321 23.277 653 356 26 150 775 55 589 2.81e-16 83.6
Msa0772740 MtrunA17_Chr2g0313491 23.103 580 333 20 156 710 160 651 3.09e-16 84.0
Msa0772740 MtrunA17_Chr5g0429951 29.243 383 219 17 125 475 130 492 6.03e-16 82.8
Msa0772740 MtrunA17_Chr3g0105551 28.093 388 245 14 107 475 97 469 6.83e-16 82.8
Msa0772740 MtrunA17_Chr6g0481141 24.809 653 349 30 153 780 254 789 7.75e-16 82.4
Msa0772740 MtrunA17_Chr4g0005331 24.412 680 399 30 109 740 220 832 1.60e-15 81.3
Msa0772740 MtrunA17_Chr8g0348541 25.312 640 384 29 181 775 233 823 2.00e-15 80.9
Msa0772740 MtrunA17_Chr2g0299811 23.746 678 375 30 166 795 58 641 2.46e-15 80.5
Msa0772740 MtrunA17_Chr3g0081341 24.646 706 386 30 145 770 234 873 2.81e-15 80.5
Msa0772740 MtrunA17_Chr3g0101221 22.934 593 357 26 169 707 200 746 3.80e-15 80.1
Msa0772740 MtrunA17_Chr7g0256881 22.125 687 415 27 146 762 184 820 5.78e-15 79.7
Msa0772740 MtrunA17_Chr6g0470011 25.047 535 320 22 169 683 181 654 9.21e-15 79.0
Msa0772740 MtrunA17_Chr2g0299851 23.962 626 347 26 181 768 226 760 1.02e-14 79.0
Msa0772740 MtrunA17_Chr4g0041441 22.606 637 380 26 166 782 200 743 1.20e-14 78.6
Msa0772740 MtrunA17_Chr8g0352861 25.000 600 327 25 140 705 177 687 1.53e-14 78.2
Msa0772740 MtrunA17_Chr4g0027251 28.947 342 199 17 166 482 176 498 1.62e-14 78.2
Msa0772740 MtrunA17_Chr6g0480911 23.892 632 366 27 166 774 218 757 1.75e-14 77.8
Msa0772740 MtrunA17_Chr3g0100961 24.731 651 375 35 169 774 196 776 1.77e-14 77.8
Msa0772740 MtrunA17_Chr1g0169901 24.958 593 323 28 170 729 186 689 1.90e-14 77.8
Msa0772740 MtrunA17_Chr6g0454851 22.877 730 386 32 115 796 251 851 1.90e-14 77.8
Msa0772740 MtrunA17_Chr3g0101331 25.124 402 239 18 146 499 173 560 2.45e-14 77.4
Msa0772740 MtrunA17_Chr7g0248121 24.516 620 360 25 207 775 256 818 2.92e-14 77.4
Msa0772740 MtrunA17_Chr3g0080771 23.191 677 391 30 145 750 172 790 3.66e-14 77.0
Msa0772740 MtrunA17_Chr3g0091861 26.211 351 226 9 141 475 80 413 3.72e-14 77.0
Msa0772740 MtrunA17_Chr2g0299921 23.833 621 354 27 181 768 225 759 4.34e-14 77.0
Msa0772740 MtrunA17_Chr5g0430581 23.962 843 507 38 1 764 1 788 4.54e-14 76.6
Msa0772740 MtrunA17_Chr1g0189271 25.088 283 182 10 169 428 33 308 4.72e-14 74.3
Msa0772740 MtrunA17_Chr6g0455551 22.323 663 344 28 181 796 296 834 5.85e-14 76.3
Msa0772740 MtrunA17_Chr5g0433771 23.370 736 430 30 119 761 136 830 6.00e-14 76.3
Msa0772740 MtrunA17_Chr3g0089961 23.053 642 392 26 164 783 191 752 7.67e-14 75.9
Msa0772740 MtrunA17_Chr6g0470081 26.087 345 221 12 169 496 181 508 7.77e-14 75.9
Msa0772740 MtrunA17_Chr3g0101231 22.698 630 352 27 165 736 202 754 8.39e-14 75.5
Msa0772740 MtrunA17_Chr3g0100971 26.686 341 213 14 165 480 189 517 1.00e-13 75.1
Msa0772740 MtrunA17_Chr6g0470021 24.578 533 322 20 169 682 72 543 1.08e-13 75.1
Msa0772740 MtrunA17_Chr3g0100761 25.806 341 216 12 165 480 149 477 1.13e-13 75.1
Msa0772740 MtrunA17_Chr3g0100681 27.070 314 193 14 165 450 5 310 1.22e-13 74.7
Msa0772740 MtrunA17_Chr5g0410021 26.503 366 231 15 145 484 154 507 1.28e-13 75.1
Msa0772740 MtrunA17_Chr4g0048421 22.554 368 250 11 148 492 151 506 1.47e-13 74.7
Msa0772740 MtrunA17_Chr3g0084841 23.571 560 309 24 246 771 296 770 1.56e-13 74.7
Msa0772740 MtrunA17_Chr7g0221481 23.214 560 338 22 168 705 183 672 1.61e-13 74.7
Msa0772740 MtrunA17_Chr6g0455221 22.631 707 408 30 118 796 169 764 1.79e-13 74.7
Msa0772740 MtrunA17_Chr3g0101181 23.209 642 354 25 169 759 205 758 1.84e-13 74.7
Msa0772740 MtrunA17_Chr5g0409991 26.776 366 225 16 145 484 157 505 2.24e-13 74.3
Msa0772740 MtrunA17_Chr6g0481251 23.881 670 358 33 153 794 60 605 3.32e-13 73.6
Msa0772740 MtrunA17_Chr2g0319921 25.684 475 254 22 327 765 384 795 3.51e-13 73.9
Msa0772740 MtrunA17_Chr5g0446611 24.176 637 380 27 168 782 196 751 3.75e-13 73.6
Msa0772740 MtrunA17_Chr7g0257201 22.321 672 414 25 170 762 197 839 3.87e-13 73.6
Msa0772740 MtrunA17_Chr1g0160951 29.167 288 174 10 141 411 39 313 4.56e-13 73.6
Msa0772740 MtrunA17_Chr8g0360991 28.746 327 189 16 175 480 178 481 4.79e-13 73.2
Msa0772740 MtrunA17_Chr6g0478721 22.951 366 251 10 148 492 69 424 5.87e-13 72.8
Msa0772740 MtrunA17_Chr6g0468451 24.138 551 321 19 169 705 181 648 6.88e-13 72.8
Msa0772740 MtrunA17_Chr3g0101271 23.015 617 343 27 169 731 174 712 8.13e-13 72.4
Msa0772740 MtrunA17_Chr3g0085131 24.847 326 218 12 168 479 179 491 8.55e-13 72.4
Msa0772740 MtrunA17_Chr3g0101241 23.015 617 343 27 169 731 174 712 9.49e-13 72.4
Msa0772740 MtrunA17_Chr3g0084731 24.127 630 343 27 181 769 229 764 1.00e-12 72.4
Msa0772740 MtrunA17_Chr3g0082131 25.263 570 327 25 163 705 186 683 1.08e-12 72.0
Msa0772740 MtrunA17_Chr1g0164391 29.293 297 177 14 139 418 168 448 1.09e-12 72.0
Msa0772740 MtrunA17_Chr1g0164581 25.350 572 324 25 163 705 162 659 1.19e-12 72.0
Msa0772740 MtrunA17_Chr4g0010201 24.037 649 388 26 87 705 98 671 1.48e-12 71.6
Msa0772740 MtrunA17_Chr7g0255111 25.320 391 240 16 121 482 122 489 1.56e-12 72.0
Msa0772740 MtrunA17_Chr3g0097631 25.868 317 200 12 176 475 1 299 1.63e-12 70.1
Msa0772740 MtrunA17_Chr5g0430511 27.446 419 254 19 87 475 95 493 1.87e-12 71.2
Msa0772740 MtrunA17_Chr3g0097641 28.814 295 179 11 155 428 127 411 2.23e-12 71.2
Msa0772740 MtrunA17_Chr3g0089761 23.818 571 332 23 160 707 187 677 2.28e-12 71.2
Msa0772740 MtrunA17_Chr3g0084971 24.554 729 431 30 90 787 106 746 2.98e-12 70.9
Msa0772740 MtrunA17_Chr3g0081531 28.179 291 144 10 566 799 536 818 3.26e-12 70.9
Msa0772740 MtrunA17_Chr4g0009141 29.787 141 95 3 648 788 1133 1269 3.80e-12 70.5
Msa0772740 MtrunA17_Chr2g0313481 23.750 560 329 25 170 710 174 654 3.94e-12 70.5
Msa0772740 MtrunA17_Chr7g0223931 28.352 261 160 8 176 420 1 250 4.36e-12 69.7
Msa0772740 MtrunA17_Chr7g0243031 27.322 183 107 4 618 776 179 359 4.82e-12 69.7
Msa0772740 MtrunA17_Chr2g0319821 32.192 146 78 3 650 776 757 900 6.49e-12 69.7
Msa0772740 MtrunA17_Chr3g0085931 27.864 323 201 11 169 475 181 487 6.73e-12 69.7
Msa0772740 MtrunA17_Chr3g0096821 27.059 340 209 10 155 475 148 467 7.92e-12 69.3
Msa0772740 MtrunA17_Chr5g0430621 27.251 411 249 17 93 475 104 492 8.26e-12 69.3
Msa0772740 MtrunA17_Chr5g0430621 34.940 166 90 6 603 763 838 990 1.08e-11 68.9
Msa0772740 MtrunA17_Chr8g0338881 22.595 655 379 28 162 788 227 781 1.14e-11 68.9
Msa0772740 MtrunA17_Chr1g0155321 23.088 667 388 24 166 803 171 741 1.22e-11 68.6
Msa0772740 MtrunA17_Chr3g0100831 25.806 341 209 18 169 484 196 517 1.37e-11 68.6
Msa0772740 MtrunA17_Chr6g0480461 21.727 695 364 24 153 781 204 784 1.45e-11 68.6
Msa0772740 MtrunA17_Chr6g0480521 21.701 682 390 28 150 802 198 764 1.48e-11 68.6
Msa0772740 MtrunA17_Chr3g0089421 26.140 329 208 13 170 479 196 508 1.59e-11 68.6
Msa0772740 MtrunA17_Chr6g0467911 27.684 354 216 15 140 475 156 487 1.72e-11 68.2
Msa0772740 MtrunA17_Chr6g0468271 27.660 188 127 4 600 782 884 1067 1.74e-11 68.2
Msa0772740 MtrunA17_Chr3g0090651 24.779 565 311 27 170 705 197 676 1.74e-11 68.2
Msa0772740 MtrunA17_Chr5g0417051 34.028 144 83 5 624 764 5 139 1.83e-11 65.9
Msa0772740 MtrunA17_Chr8g0363891 28.571 203 112 5 599 774 87 283 2.02e-11 67.8
Msa0772740 MtrunA17_Chr3g0081371 24.042 757 448 34 144 814 179 894 2.23e-11 67.8
Msa0772740 MtrunA17_Chr5g0414201 25.946 555 307 22 169 705 192 660 2.34e-11 67.8
Msa0772740 MtrunA17_Chr2g0296451 26.190 252 157 10 554 796 44 275 3.20e-11 67.0
Msa0772740 MtrunA17_Chr6g0468021 27.717 184 120 4 623 799 895 1072 3.80e-11 67.0
Msa0772740 MtrunA17_Chr5g0430721 24.293 778 449 35 103 800 150 867 3.96e-11 67.0
Msa0772740 MtrunA17_Chr6g0468341 26.645 304 189 10 135 418 143 432 4.25e-11 67.0
Msa0772740 MtrunA17_Chr8g0343671 24.372 677 419 27 149 777 229 860 5.11e-11 66.6
Msa0772740 MtrunA17_Chr3g0100851 24.629 337 211 14 165 480 82 396 5.17e-11 66.6
Msa0772740 MtrunA17_Chr5g0430141 28.955 335 196 13 166 475 176 493 5.45e-11 66.6
Msa0772740 MtrunA17_Chr7g0257531 21.415 509 300 19 297 796 1 418 5.77e-11 66.2
Msa0772740 MtrunA17_Chr6g0482111 26.712 146 105 2 650 795 647 790 6.22e-11 66.6
Msa0772740 MtrunA17_Chr3g0084351 25.606 371 227 17 146 484 98 451 7.97e-11 65.5
Msa0772740 MtrunA17_Chr3g0100261 25.948 343 216 12 156 480 159 481 8.15e-11 66.2
Msa0772740 MtrunA17_Chr7g0257541 24.511 665 403 27 170 761 201 839 8.83e-11 65.9
Msa0772740 MtrunA17_Chr8g0338671 24.383 324 220 12 168 476 73 386 9.82e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0772740 AT5G66900.1 37.881 821 435 18 16 810 32 803 8.73e-147 452
Msa0772740 AT5G66900.2 37.881 821 435 18 16 810 80 851 1.05e-145 450
Msa0772740 AT5G66910.1 40.686 671 356 14 149 810 172 809 9.94e-135 421
Msa0772740 AT4G33300.2 34.891 685 383 16 146 813 176 814 4.26e-107 348
Msa0772740 AT4G33300.1 34.891 685 383 16 146 813 176 814 4.26e-107 348
Msa0772740 AT5G47280.1 33.537 656 389 13 164 812 5 620 2.53e-105 337
Msa0772740 AT5G04720.1 33.130 655 388 14 166 813 198 809 6.81e-100 328
Msa0772740 AT1G33560.1 33.076 647 375 14 173 813 191 785 2.53e-93 310
Msa0772740 AT5G66890.1 39.202 426 221 9 392 810 15 409 6.68e-81 266
Msa0772740 AT5G66900.3 33.925 507 295 12 16 502 80 566 2.39e-65 229
Msa0772740 AT5G66630.1 31.193 327 192 8 1 303 6 323 1.07e-29 126
Msa0772740 AT3G04220.3 22.435 731 475 28 94 776 182 868 1.43e-21 101
Msa0772740 AT3G04220.3 39.073 151 85 3 653 800 721 867 5.52e-19 92.8
Msa0772740 AT3G04220.3 31.217 189 100 6 601 776 716 887 3.57e-16 83.6
Msa0772740 AT3G04220.3 34.868 152 91 4 653 801 698 844 2.00e-14 78.2
Msa0772740 AT3G04220.1 22.458 708 474 27 94 776 182 839 1.73e-21 100
Msa0772740 AT3G04220.1 39.073 151 85 3 653 800 692 838 5.97e-19 92.8
Msa0772740 AT3G04220.1 31.217 189 100 6 601 776 687 858 4.01e-16 83.6
Msa0772740 AT3G25510.2 32.766 235 136 5 549 774 502 723 3.12e-21 100
Msa0772740 AT3G25510.2 30.374 214 125 6 570 774 570 768 1.74e-16 84.7
Msa0772740 AT3G25510.2 38.281 128 77 2 648 775 456 581 3.00e-14 77.8
Msa0772740 AT3G25510.2 34.483 116 76 0 653 768 674 789 1.42e-13 75.5
Msa0772740 AT3G25510.2 30.864 162 105 4 615 775 497 652 9.51e-11 66.2
Msa0772740 AT3G25510.1 32.766 235 136 5 549 774 502 723 3.12e-21 100
Msa0772740 AT3G25510.1 30.374 214 125 6 570 774 570 768 1.74e-16 84.7
Msa0772740 AT3G25510.1 38.281 128 77 2 648 775 456 581 3.00e-14 77.8
Msa0772740 AT3G25510.1 34.483 116 76 0 653 768 674 789 1.42e-13 75.5
Msa0772740 AT3G25510.1 30.864 162 105 4 615 775 497 652 9.51e-11 66.2
Msa0772740 AT1G69550.1 37.821 156 87 2 623 775 931 1079 5.07e-21 99.8
Msa0772740 AT1G69550.1 42.105 114 66 0 662 775 870 983 2.52e-19 94.4
Msa0772740 AT1G69550.1 37.908 153 90 1 623 775 692 839 2.77e-19 94.0
Msa0772740 AT1G69550.1 38.562 153 89 3 623 775 1051 1198 8.77e-19 92.4
Msa0772740 AT1G69550.1 35.714 182 99 5 601 774 928 1099 1.17e-18 92.0
Msa0772740 AT1G69550.1 25.538 650 407 26 149 768 254 856 2.69e-17 87.8
Msa0772740 AT1G69550.1 31.884 207 124 4 601 802 1048 1242 1.18e-16 85.5
Msa0772740 AT1G69550.1 36.538 156 89 2 623 775 787 935 2.98e-15 80.9
Msa0772740 AT1G69550.1 36.170 141 85 2 640 775 819 959 8.76e-14 76.3
Msa0772740 AT1G61310.1 28.571 357 217 14 144 476 151 493 1.60e-20 97.8
Msa0772740 AT1G61190.4 26.632 383 236 13 120 476 121 484 8.98e-20 95.5
Msa0772740 AT5G35450.2 26.273 373 238 16 135 486 149 505 1.28e-19 94.7
Msa0772740 AT5G35450.1 26.273 373 238 16 135 486 149 505 1.28e-19 94.7
Msa0772740 AT1G61190.2 26.632 383 236 13 120 476 121 484 1.65e-19 94.4
Msa0772740 AT1G61190.3 26.632 383 236 13 120 476 121 484 1.65e-19 94.4
Msa0772740 AT1G61190.1 26.761 355 218 12 144 476 150 484 2.88e-19 94.0
Msa0772740 AT2G14080.2 39.837 123 74 0 653 775 613 735 3.01e-19 94.0
Msa0772740 AT2G14080.2 32.584 178 114 2 623 800 540 711 2.05e-18 91.3
Msa0772740 AT2G14080.2 32.432 148 88 2 625 768 637 776 2.33e-13 74.7
Msa0772740 AT2G14080.1 39.837 123 74 0 653 775 746 868 3.07e-19 94.0
Msa0772740 AT2G14080.1 32.584 178 114 2 623 800 673 844 1.77e-18 91.3
Msa0772740 AT2G14080.1 32.432 148 88 2 625 768 770 909 1.84e-13 75.1
Msa0772740 AT1G61180.1 27.042 355 214 13 144 476 149 480 4.50e-19 93.2
Msa0772740 AT1G61180.2 27.042 355 214 13 144 476 149 480 5.58e-19 92.8
Msa0772740 AT1G59780.2 25.459 436 283 18 80 486 82 504 8.11e-19 92.4
Msa0772740 AT1G12280.1 24.384 365 250 9 144 495 152 503 8.62e-19 92.0
Msa0772740 AT1G59780.1 25.459 436 283 18 80 486 87 509 1.03e-18 92.0
Msa0772740 AT3G14470.1 25.976 589 325 28 166 726 194 699 1.90e-18 91.3
Msa0772740 AT3G14470.2 25.976 589 325 28 166 726 194 699 1.90e-18 91.3
Msa0772740 AT1G58410.1 26.842 380 233 15 136 486 149 512 4.16e-18 90.1
Msa0772740 AT1G58410.4 26.842 380 233 15 136 486 149 512 4.16e-18 90.1
Msa0772740 AT1G58410.2 26.842 380 233 15 136 486 149 512 4.16e-18 90.1
Msa0772740 AT5G44510.2 34.416 154 96 1 623 776 656 804 5.02e-18 90.1
Msa0772740 AT5G44510.2 35.135 148 71 2 651 774 727 873 2.48e-17 87.8
Msa0772740 AT5G44510.2 35.443 158 101 1 618 775 623 779 2.97e-17 87.4
Msa0772740 AT5G44510.2 32.778 180 110 3 596 775 659 827 3.51e-16 84.0
Msa0772740 AT5G44510.2 32.857 140 88 3 642 776 809 947 1.99e-13 75.1
Msa0772740 AT5G44510.3 34.416 154 96 1 623 776 656 804 5.36e-18 89.7
Msa0772740 AT5G44510.3 35.135 148 71 2 651 774 727 873 2.41e-17 87.8
Msa0772740 AT5G44510.3 35.443 158 101 1 618 775 623 779 3.45e-17 87.4
Msa0772740 AT5G44510.3 36.585 123 78 0 653 775 705 827 3.68e-16 84.0
Msa0772740 AT5G44510.3 32.857 140 88 3 642 776 809 947 2.24e-13 74.7
Msa0772740 AT5G44510.4 34.416 154 96 1 623 776 656 804 5.45e-18 89.7
Msa0772740 AT5G44510.4 35.135 148 71 2 651 774 727 873 2.45e-17 87.8
Msa0772740 AT5G44510.4 35.443 158 101 1 618 775 623 779 3.76e-17 87.0
Msa0772740 AT5G44510.4 36.585 123 78 0 653 775 705 827 3.72e-16 84.0
Msa0772740 AT5G44510.4 32.857 140 88 3 642 776 809 947 2.11e-13 75.1
Msa0772740 AT5G44510.1 34.416 154 96 1 623 776 656 804 5.85e-18 89.7
Msa0772740 AT5G44510.1 35.135 148 71 2 651 774 727 873 2.99e-17 87.4
Msa0772740 AT5G44510.1 35.443 158 101 1 618 775 623 779 3.67e-17 87.0
Msa0772740 AT5G44510.1 32.778 180 110 3 596 775 659 827 3.98e-16 84.0
Msa0772740 AT5G44510.1 32.857 140 88 3 642 776 809 947 2.29e-13 74.7
Msa0772740 AT3G44480.2 33.721 172 99 4 604 768 713 876 1.62e-17 88.2
Msa0772740 AT3G44480.2 34.270 178 106 4 623 800 713 879 6.88e-16 83.2
Msa0772740 AT3G44480.3 33.721 172 99 4 604 768 713 876 1.92e-17 88.2
Msa0772740 AT3G44480.3 34.270 178 106 4 623 800 713 879 9.03e-16 82.8
Msa0772740 AT3G44480.5 33.721 172 99 4 604 768 713 876 1.92e-17 88.2
Msa0772740 AT3G44480.5 34.270 178 106 4 623 800 713 879 9.03e-16 82.8
Msa0772740 AT3G44480.4 33.721 172 99 4 604 768 713 876 1.97e-17 88.2
Msa0772740 AT3G44480.4 34.270 178 106 4 623 800 713 879 9.05e-16 82.8
Msa0772740 AT3G44480.1 33.721 172 99 4 604 768 713 876 1.97e-17 88.2
Msa0772740 AT3G44480.1 34.270 178 106 4 623 800 713 879 9.05e-16 82.8
Msa0772740 AT3G50950.2 24.621 593 324 27 148 705 159 663 3.43e-17 87.0
Msa0772740 AT3G50950.1 24.621 593 324 27 148 705 159 663 3.43e-17 87.0
Msa0772740 AT1G61300.2 26.171 363 222 12 138 476 29 369 3.67e-17 86.7
Msa0772740 AT1G61300.1 26.171 363 222 12 138 476 29 369 5.53e-17 86.3
Msa0772740 AT1G59124.1 23.459 665 374 28 136 753 150 726 8.32e-17 85.9
Msa0772740 AT1G58807.2 23.459 665 374 28 136 753 150 726 8.32e-17 85.9
Msa0772740 AT1G53350.1 25.606 371 242 15 136 484 150 508 8.58e-17 85.9
Msa0772740 AT1G59124.2 23.459 665 374 28 136 753 150 726 1.38e-16 85.1
Msa0772740 AT1G58807.1 23.459 665 374 28 136 753 150 726 1.38e-16 85.1
Msa0772740 AT3G44630.2 35.252 139 89 1 630 768 764 901 1.44e-16 85.1
Msa0772740 AT3G44630.2 21.144 804 506 32 31 775 126 860 2.94e-11 68.2
Msa0772740 AT3G44630.1 35.252 139 89 1 630 768 764 901 1.44e-16 85.1
Msa0772740 AT3G44630.1 21.144 804 506 32 31 775 126 860 2.94e-11 68.2
Msa0772740 AT3G44630.4 35.252 139 89 1 630 768 764 901 1.44e-16 85.1
Msa0772740 AT3G44630.4 21.144 804 506 32 31 775 126 860 2.94e-11 68.2
Msa0772740 AT3G44630.3 35.252 139 89 1 630 768 764 901 1.75e-16 85.1
Msa0772740 AT3G44630.3 21.144 804 506 32 31 775 126 860 2.69e-11 68.2
Msa0772740 AT1G12220.1 26.027 365 239 10 144 492 152 501 1.98e-16 84.7
Msa0772740 AT1G12220.2 26.027 365 239 10 144 492 152 501 1.98e-16 84.7
Msa0772740 AT5G11250.3 36.111 144 88 2 625 768 689 828 2.27e-16 84.7
Msa0772740 AT5G11250.3 23.066 711 419 31 149 781 154 814 1.25e-14 79.0
Msa0772740 AT5G11250.1 36.111 144 88 2 625 768 689 828 2.27e-16 84.7
Msa0772740 AT5G11250.1 23.066 711 419 31 149 781 154 814 1.25e-14 79.0
Msa0772740 AT1G12220.3 26.027 365 239 10 144 492 31 380 2.30e-16 84.3
Msa0772740 AT5G11250.2 36.111 144 88 2 625 768 771 910 2.34e-16 84.7
Msa0772740 AT5G11250.2 23.066 711 419 31 149 781 236 896 1.51e-14 78.6
Msa0772740 AT1G10920.1 24.219 384 255 14 127 484 18 391 2.99e-16 84.0
Msa0772740 AT1G10920.2 24.219 384 255 14 127 484 18 391 2.99e-16 84.0
Msa0772740 AT1G10920.4 24.219 384 255 14 127 484 18 391 2.99e-16 84.0
Msa0772740 AT1G59218.1 25.781 384 236 16 136 486 150 517 1.28e-15 82.0
Msa0772740 AT1G59218.2 25.781 384 236 16 136 486 150 517 1.28e-15 82.0
Msa0772740 AT1G59218.3 25.781 384 236 16 136 486 150 517 1.28e-15 82.0
Msa0772740 AT1G58848.1 25.781 384 236 16 136 486 150 517 1.28e-15 82.0
Msa0772740 AT1G58848.2 25.781 384 236 16 136 486 150 517 1.28e-15 82.0
Msa0772740 AT1G12290.1 23.932 351 235 8 144 476 151 487 1.38e-14 78.6
Msa0772740 AT1G12290.4 23.932 351 235 8 144 476 109 445 1.42e-14 78.6
Msa0772740 AT1G12290.3 23.932 351 235 8 144 476 109 445 1.42e-14 78.6
Msa0772740 AT1G12290.2 23.932 351 235 8 144 476 109 445 1.42e-14 78.6
Msa0772740 AT1G12210.1 25.779 353 223 12 144 476 152 485 1.99e-14 78.2
Msa0772740 AT1G63880.2 22.102 647 357 24 149 765 187 716 2.08e-14 77.8
Msa0772740 AT3G44670.1 31.092 238 135 9 574 803 712 928 2.09e-14 78.2
Msa0772740 AT3G44670.2 31.092 238 135 9 574 803 712 928 2.09e-14 78.2
Msa0772740 AT1G12210.3 25.779 353 223 12 144 476 110 443 2.23e-14 77.8
Msa0772740 AT1G12210.2 25.779 353 223 12 144 476 110 443 2.23e-14 77.8
Msa0772740 AT1G63880.1 22.222 648 353 24 150 765 188 716 4.80e-14 77.0
Msa0772740 AT1G58390.1 25.575 391 245 19 126 486 140 514 7.78e-14 76.3
Msa0772740 AT1G58390.2 25.575 391 245 19 126 486 140 514 7.78e-14 76.3
Msa0772740 AT1G59620.2 25.521 384 238 16 128 482 10 374 1.20e-13 75.5
Msa0772740 AT1G58400.3 23.881 402 248 16 136 500 151 531 1.30e-13 75.5
Msa0772740 AT1G58400.2 23.881 402 248 16 136 500 151 531 1.30e-13 75.5
Msa0772740 AT1G58602.2 25.181 691 399 36 132 765 145 774 2.13e-13 75.1
Msa0772740 AT1G58602.1 25.181 691 399 36 132 765 145 774 2.13e-13 75.1
Msa0772740 AT1G27180.3 23.160 652 388 24 167 775 221 802 2.15e-13 74.7
Msa0772740 AT1G27180.3 34.109 129 79 4 650 778 915 1037 1.24e-12 72.4
Msa0772740 AT1G27180.3 28.342 187 100 4 616 776 696 874 5.08e-12 70.5
Msa0772740 AT1G27180.3 40.404 99 58 1 678 776 683 780 2.15e-11 68.6
Msa0772740 AT1G27180.1 23.160 652 388 24 167 775 383 964 2.63e-13 74.7
Msa0772740 AT1G27180.1 34.109 129 79 4 650 778 1077 1199 1.51e-12 72.4
Msa0772740 AT1G27180.1 28.342 187 100 4 616 776 858 1036 6.28e-12 70.1
Msa0772740 AT1G27180.1 40.404 99 58 1 678 776 845 942 2.29e-11 68.6
Msa0772740 AT1G27180.2 23.160 652 388 24 167 775 221 802 3.27e-13 74.3
Msa0772740 AT1G27180.2 34.109 129 79 4 650 778 915 1037 1.69e-12 72.0
Msa0772740 AT1G27180.2 28.342 187 100 4 616 776 696 874 7.50e-12 70.1
Msa0772740 AT1G27180.2 40.404 99 58 1 678 776 683 780 2.71e-11 68.2
Msa0772740 AT5G18350.1 37.168 113 70 1 653 765 669 780 4.72e-13 73.9
Msa0772740 AT5G18350.1 33.051 118 78 1 651 768 644 760 1.14e-11 69.3
Msa0772740 AT5G05400.1 26.722 363 219 17 148 492 155 488 5.06e-13 73.6
Msa0772740 AT5G05400.2 27.299 348 206 17 163 492 1 319 7.10e-13 72.8
Msa0772740 AT5G05400.3 27.299 348 206 17 163 492 1 319 7.10e-13 72.8
Msa0772740 AT5G45200.1 23.844 692 393 27 153 800 222 823 1.55e-12 72.0
Msa0772740 AT3G25505.1 36.522 115 71 2 654 768 427 539 1.64e-12 71.2
Msa0772740 AT1G27180.5 34.109 129 79 4 650 778 913 1035 1.80e-12 72.0
Msa0772740 AT1G27180.5 28.342 187 100 4 616 776 694 872 8.30e-12 69.7
Msa0772740 AT1G27180.5 40.404 99 58 1 678 776 681 778 2.66e-11 68.2
Msa0772740 AT1G27180.8 34.109 129 79 4 650 778 913 1035 1.80e-12 72.0
Msa0772740 AT1G27180.8 28.342 187 100 4 616 776 694 872 8.30e-12 69.7
Msa0772740 AT1G27180.8 40.404 99 58 1 678 776 681 778 2.66e-11 68.2
Msa0772740 AT2G16870.1 35.938 128 79 3 638 765 586 710 1.90e-12 71.6
Msa0772740 AT1G27180.7 34.109 129 79 4 650 778 739 861 2.05e-12 71.6
Msa0772740 AT1G27180.7 28.342 187 100 4 616 776 520 698 1.02e-11 69.3
Msa0772740 AT1G27180.7 40.404 99 58 1 678 776 507 604 2.77e-11 68.2
Msa0772740 AT1G27180.6 34.109 129 79 4 650 778 739 861 2.05e-12 71.6
Msa0772740 AT1G27180.6 28.342 187 100 4 616 776 520 698 1.02e-11 69.3
Msa0772740 AT1G27180.6 40.404 99 58 1 678 776 507 604 2.77e-11 68.2
Msa0772740 AT1G27180.4 34.109 129 79 4 650 778 739 861 2.05e-12 71.6
Msa0772740 AT1G27180.4 28.342 187 100 4 616 776 520 698 1.02e-11 69.3
Msa0772740 AT1G27180.4 40.404 99 58 1 678 776 507 604 2.77e-11 68.2
Msa0772740 AT5G45200.3 23.844 692 393 27 153 800 222 823 2.10e-12 71.6
Msa0772740 AT2G16870.3 35.938 128 79 3 638 765 312 436 2.41e-12 71.2
Msa0772740 AT2G16870.2 35.938 128 79 3 638 765 312 436 2.41e-12 71.2
Msa0772740 AT1G31540.3 25.056 443 229 16 326 765 373 715 2.41e-12 71.2
Msa0772740 AT1G31540.1 25.056 443 229 16 326 765 373 715 2.41e-12 71.2
Msa0772740 AT1G58410.3 25.594 379 207 16 136 486 149 480 3.01e-12 70.9
Msa0772740 AT1G31540.2 25.056 443 229 16 326 765 373 715 3.45e-12 70.9
Msa0772740 AT5G18370.1 34.965 143 89 3 654 796 665 803 5.40e-12 70.5
Msa0772740 AT1G27170.2 38.739 111 63 3 668 778 920 1025 6.32e-12 70.1
Msa0772740 AT1G27170.2 32.484 157 90 7 625 775 715 861 1.50e-11 68.9
Msa0772740 AT1G27170.2 39.394 99 59 1 678 776 672 769 4.91e-11 67.4
Msa0772740 AT1G27170.1 38.739 111 63 3 668 778 920 1025 6.88e-12 70.1
Msa0772740 AT1G27170.1 32.484 157 90 7 625 775 715 861 1.38e-11 68.9
Msa0772740 AT1G27170.1 39.394 99 59 1 678 776 672 769 5.34e-11 67.0
Msa0772740 AT5G17680.2 34.746 118 73 2 653 770 765 878 7.05e-12 70.1
Msa0772740 AT5G17680.1 34.746 118 73 2 653 770 764 877 7.17e-12 70.1
Msa0772740 AT4G16940.6 33.628 113 73 2 653 765 698 808 2.41e-11 68.2
Msa0772740 AT4G16940.2 33.628 113 73 2 653 765 698 808 2.41e-11 68.2
Msa0772740 AT4G16940.3 33.628 113 73 2 653 765 698 808 2.41e-11 68.2
Msa0772740 AT4G16940.5 33.628 113 73 2 653 765 698 808 2.41e-11 68.2
Msa0772740 AT4G16940.1 33.628 113 73 2 653 765 698 808 2.57e-11 68.2
Msa0772740 AT4G16940.4 33.628 113 73 2 653 765 698 808 2.57e-11 68.2
Msa0772740 AT5G45200.2 23.724 666 376 25 178 800 3 579 2.82e-11 67.8
Msa0772740 AT1G12280.2 22.253 364 226 11 144 495 114 432 3.69e-11 67.4
Msa0772740 AT5G45060.2 33.333 123 76 3 643 765 674 790 4.68e-11 67.4
Msa0772740 AT5G45060.1 33.333 123 76 3 643 765 674 790 4.68e-11 67.4
Msa0772740 AT4G16950.1 29.834 181 91 6 653 814 940 1103 7.65e-11 66.6
Msa0772740 AT4G16950.3 29.834 181 91 6 653 814 940 1103 7.84e-11 66.6
Msa0772740 AT4G16950.2 29.834 181 91 6 653 814 940 1103 8.48e-11 66.6
Msa0772740 AT4G16950.4 29.834 181 91 6 653 814 940 1103 8.73e-11 66.6
Msa0772740 AT4G16920.6 29.834 181 91 6 653 814 934 1097 9.99e-11 66.2

Find 174 sgRNAs with CRISPR-Local

Find 21 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTATTCTGTAGTCAAATT+TGG 0.098549 5_2:+47097223 Msa0772740:CDS
CCTCAAGACCCTGAATTTAT+TGG 0.144092 5_2:+47092986 Msa0772740:CDS
ATAATCATGTGAATCAAATT+AGG 0.166971 5_2:+47092948 Msa0772740:CDS
TATTGGAAAGTTGGAGAATT+TGG 0.180901 5_2:+47097015 Msa0772740:CDS
TTGGCATAGCATCTGATATT+TGG 0.181892 5_2:-47096865 None:intergenic
CCCACCACAATCCCACTTAA+TGG 0.184022 5_2:-47092566 None:intergenic
CCAAATTTGACTACAGAATA+AGG 0.188962 5_2:-47097223 None:intergenic
TTGTGCAAATTGAGAATAAA+AGG 0.206149 5_2:+47092888 Msa0772740:CDS
AAGTAGAGCATAACTTAATT+TGG 0.220164 5_2:+47097344 Msa0772740:CDS
AGATTGATCATTGACTTAAA+TGG 0.222575 5_2:+47096008 Msa0772740:CDS
TTTAGGCCTGCAACAGATTC+TGG 0.226820 5_2:-47097079 None:intergenic
TTGACTTAAATGGAAATAAT+TGG 0.233093 5_2:+47096018 Msa0772740:CDS
GAAGGAGTGCTTCATGGATA+TGG 0.238768 5_2:+47095582 Msa0772740:CDS
CATAGAAACTTCCAAGGATT+TGG 0.261605 5_2:+47092658 Msa0772740:CDS
GGCGTATATATCTTTAGATT+TGG 0.262221 5_2:-47097319 None:intergenic
TGTCAAACTTGAAAAGAATA+AGG 0.262725 5_2:+47096741 Msa0772740:CDS
TAATCATGTGAATCAAATTA+GGG 0.276599 5_2:+47092949 Msa0772740:CDS
ATAGAGTTGCATAGTTATTA+TGG 0.285174 5_2:+47092538 Msa0772740:exon
ATCTTTAGATTTGGAATGTT+AGG 0.288612 5_2:-47097310 None:intergenic
CCTTTGGTTGAACAGATAAA+AGG 0.288651 5_2:+47092683 Msa0772740:CDS
CATAACTTAATTTGGCTTCA+TGG 0.288710 5_2:+47097352 Msa0772740:CDS
TTCCAAGGATTTGGATCCTT+TGG 0.291579 5_2:+47092667 Msa0772740:CDS
AGGGTTGGATTTAGAAGATT+TGG 0.296704 5_2:+47094814 Msa0772740:CDS
TGAGAATAAAAGGGATTTGA+TGG 0.304146 5_2:+47092898 Msa0772740:CDS
TCAGCAATGCCTCAAGATAT+TGG 0.309963 5_2:+47096998 Msa0772740:CDS
TTAACCATTCCAATAAATTC+AGG 0.311369 5_2:-47092995 None:intergenic
ATTAAGTTATGCTCTACTTT+AGG 0.312067 5_2:-47097340 None:intergenic
CAGAAATTACCGAACGATAT+TGG 0.313790 5_2:+47097142 Msa0772740:CDS
ACAGGGATCCTCTGGTCTTC+AGG 0.327301 5_2:-47095613 None:intergenic
ATATCAATGAGGACGGTAAC+AGG 0.328759 5_2:-47095631 None:intergenic
TCAACAAGGTCAACTGAGTT+AGG 0.329913 5_2:-47094745 None:intergenic
AATGCCAGATTATAAAATTC+TGG 0.332348 5_2:+47094783 Msa0772740:CDS
TCATCTAAGACTAATAATAT+TGG 0.340454 5_2:-47094715 None:intergenic
ATGAAGAAGGTTATGCCTTA+TGG 0.349986 5_2:+47097278 Msa0772740:CDS
GTTTGAACATTGCAGACTTA+AGG 0.355914 5_2:+47094621 Msa0772740:CDS
CTTTAATACCATCTTCATCT+AGG 0.355958 5_2:-47095672 None:intergenic
ACCTGACAAAGCTGAGGTTC+TGG 0.356406 5_2:+47096586 Msa0772740:CDS
TATGACATTAATAAAATTCC+TGG 0.367951 5_2:-47095722 None:intergenic
ATGCTCAACTCCACTAGATT+TGG 0.369068 5_2:-47096884 None:intergenic
ATAAAATTCTGGTGACTTCA+AGG 0.370531 5_2:+47094794 Msa0772740:CDS
AGAAGCTTAGTCTTAATCTA+TGG 0.375291 5_2:+47092792 Msa0772740:CDS
TAGTTACTACCTTTGATTAG+TGG 0.375435 5_2:-47093130 None:intergenic
TTGACTGGTTTGGGTGGATC+TGG 0.382247 5_2:+47093073 Msa0772740:CDS
CTTTACAATGTTCTTCAAGT+TGG 0.390090 5_2:-47094593 None:intergenic
TTTACAATGTTCTTCAAGTT+GGG 0.394148 5_2:-47094592 None:intergenic
CGAGACAACATAGCTTGTTT+AGG 0.395107 5_2:-47097096 None:intergenic
TGAAGAAGGTTATGCCTTAT+GGG 0.397009 5_2:+47097279 Msa0772740:CDS
AATCTTTCTATCTCTTCTCT+TGG 0.397517 5_2:-47092728 None:intergenic
CTAATGATTCCTTGCTGATT+CGG 0.400215 5_2:-47096059 None:intergenic
GTCTGACCAGTACTCATTGC+CGG 0.411043 5_2:+47096622 Msa0772740:CDS
ATGGAAATAATTGGCCTGAT+TGG 0.416752 5_2:+47096027 Msa0772740:CDS
ATAGATAGTGAAAGCTTGTA+AGG 0.417624 5_2:+47095390 Msa0772740:intron
CAATGAGAAGGAGTGCTTCA+TGG 0.419841 5_2:+47095576 Msa0772740:CDS
GTTAGGAAATTGTTCCCATA+AGG 0.424776 5_2:-47097293 None:intergenic
GGAAATCTACTGAGGGAAGT+TGG 0.428408 5_2:+47094685 Msa0772740:CDS
GCATATTCAAACTTTGTTGA+AGG 0.429977 5_2:-47095543 None:intergenic
TTAATCAAGTTTGAGCTACT+TGG 0.431457 5_2:+47096713 Msa0772740:CDS
GAGATACCAGAATCTGTTGC+AGG 0.432296 5_2:+47097073 Msa0772740:CDS
ACCAGAACCTCAGCTTTGTC+AGG 0.432532 5_2:-47096587 None:intergenic
CCCTCAGTAGATTTCCCAAT+CGG 0.439414 5_2:-47094678 None:intergenic
TCAACAAAGTTTGAATATGC+TGG 0.440710 5_2:+47095546 Msa0772740:CDS
TTGGTGCTAAAGGTCATTGC+TGG 0.445432 5_2:+47095421 Msa0772740:CDS
TAAGCAATTTAATGAGTTGA+AGG 0.446819 5_2:+47093015 Msa0772740:CDS
CTCTTGCTAAGAAGCTCTGT+TGG 0.447008 5_2:+47093104 Msa0772740:CDS
GCCTCAAGATATTGGAAAGT+TGG 0.448616 5_2:+47097006 Msa0772740:CDS
TTCGGTTCAACCCACCAATC+AGG 0.451045 5_2:-47096041 None:intergenic
GAAATCTACTGAGGGAAGTT+GGG 0.454236 5_2:+47094686 Msa0772740:CDS
CCCTTGTATTGCACATATGA+AGG 0.454614 5_2:-47096820 None:intergenic
TTATTAGTCTTAGATGATGT+TGG 0.461951 5_2:+47094721 Msa0772740:CDS
TTCACGTCACCAATATCGTT+CGG 0.465179 5_2:-47097151 None:intergenic
AACCAAAGGATCCAAATCCT+TGG 0.465417 5_2:-47092669 None:intergenic
AGGATATTGTGCATATCAAC+TGG 0.465878 5_2:+47096143 Msa0772740:CDS
TATCTCTTCTAAATCAGAAC+AGG 0.466396 5_2:-47097056 None:intergenic
CGTAGGTACTCATTCATTAC+CGG 0.467317 5_2:+47096083 Msa0772740:CDS
GGGTTCACCGTTGGTGCTAA+AGG 0.469346 5_2:+47095411 Msa0772740:CDS
TCTTCGTCGTTTGTAAAGTC+AGG 0.470971 5_2:-47094646 None:intergenic
TGTGAAGTGGCTAGATATGA+AGG 0.473239 5_2:+47095465 Msa0772740:CDS
AAAGGTTCCCACTATTCGTT+GGG 0.473739 5_2:+47092701 Msa0772740:CDS
CCCTTCATATGTGCAATACA+AGG 0.475893 5_2:+47096819 Msa0772740:CDS
TAGCAATTCATCAAAGCAAA+GGG 0.478431 5_2:+47095964 Msa0772740:CDS
CATGATCAAGTGGATTCAAC+TGG 0.479618 5_2:-47094846 None:intergenic
ATTGAGCATAGTGACGGAAA+AGG 0.481450 5_2:-47094882 None:intergenic
AGACCCTGAATTTATTGGAA+TGG 0.488759 5_2:+47092991 Msa0772740:CDS
AAGGAGTGCTTCATGGATAT+GGG 0.493997 5_2:+47095583 Msa0772740:CDS
TAACCATTCCAATAAATTCA+GGG 0.496557 5_2:-47092994 None:intergenic
TGAAATCCGGCAATGAGTAC+TGG 0.497270 5_2:-47096628 None:intergenic
TAATCAAGTTTGAGCTACTT+GGG 0.497683 5_2:+47096714 Msa0772740:CDS
TGTGCAAATTGAGAATAAAA+GGG 0.497696 5_2:+47092889 Msa0772740:CDS
AAACTTGAAAAGAATAAGGT+TGG 0.497900 5_2:+47096745 Msa0772740:CDS
TTGGTCGACCCAACGAATAG+TGG 0.499955 5_2:-47092709 None:intergenic
ATATCTAGCCACTTCACAAA+AGG 0.500693 5_2:-47095460 None:intergenic
TTGAGCATAGTGACGGAAAA+GGG 0.509321 5_2:-47094881 None:intergenic
AGTTGATATGCACAATATCC+TGG 0.510349 5_2:-47096141 None:intergenic
AAAAGGTTCCCACTATTCGT+TGG 0.516851 5_2:+47092700 Msa0772740:CDS
TCTTGCTAAGAAGCTCTGTT+GGG 0.517485 5_2:+47093105 Msa0772740:CDS
TAAAATTCTGGTGACTTCAA+GGG 0.519657 5_2:+47094795 Msa0772740:CDS
CTCATTCATTACCGGAATGT+TGG 0.520165 5_2:+47096091 Msa0772740:CDS
GGACGGTAACAGGGATCCTC+TGG 0.521875 5_2:-47095621 None:intergenic
CGAAGATGCAATTAACCGAT+TGG 0.522289 5_2:+47094663 Msa0772740:CDS
ATTATGGCGGATCCATTAAG+TGG 0.522970 5_2:+47092554 Msa0772740:exon
GCTTGAGAAGCTCTACATGA+AGG 0.526370 5_2:+47097177 Msa0772740:CDS
TGGAGAATTTGGAAGTGCTA+AGG 0.526453 5_2:+47097026 Msa0772740:CDS
TCCAACTTTCCAATATCTTG+AGG 0.528606 5_2:-47097007 None:intergenic
TTACCGTCCTCATTGATATG+TGG 0.530552 5_2:+47095635 Msa0772740:CDS
TCAAGTGGATTCAACTGGCA+TGG 0.533031 5_2:-47094841 None:intergenic
AGTACTATTAGACTCAAGAA+TGG 0.538290 5_2:-47095506 None:intergenic
GCAGATTCTTCAATAAGCAT+AGG 0.538562 5_2:-47096787 None:intergenic
ATTCTGGTGACTTCAAGGGT+TGG 0.538758 5_2:+47094799 Msa0772740:CDS
TCATCAACAAGATCTCTATC+CGG 0.540834 5_2:-47094928 None:intergenic
CCAATAAATTCAGGGTCTTG+AGG 0.541046 5_2:-47092986 None:intergenic
AATCAAATTAGGGGTTTGTA+CGG 0.544046 5_2:+47092959 Msa0772740:CDS
GTAATGTTAGAGAATCCATC+AGG 0.544134 5_2:-47096935 None:intergenic
TTTATTCTCAATTTGCACAA+TGG 0.545165 5_2:-47092885 None:intergenic
TTCTTCAATAAGCATAGGCA+AGG 0.545611 5_2:-47096782 None:intergenic
GAAGATGCAATTAACCGATT+GGG 0.547671 5_2:+47094664 Msa0772740:CDS
AACAACTAAAGGTTGCTGCC+AGG 0.547790 5_2:+47096123 Msa0772740:CDS
GAAATAATTGGCCTGATTGG+TGG 0.549456 5_2:+47096030 Msa0772740:CDS
AAAGCTTCTGAAGCAATATG+AGG 0.549830 5_2:+47092844 Msa0772740:CDS
TTATTAATGTCATAGCTACA+AGG 0.551146 5_2:+47095731 Msa0772740:CDS
TTAGCAATTCATCAAAGCAA+AGG 0.553027 5_2:+47095963 Msa0772740:CDS
GATTTGATTAAATTGCCTGA+TGG 0.553572 5_2:+47096920 Msa0772740:CDS
GATCATGCAGCATGACATAG+TGG 0.556090 5_2:-47095929 None:intergenic
ACAGAGCTTCTTAGCAAGAG+TGG 0.556247 5_2:-47093101 None:intergenic
AGCTTGTAAGGGTTCACCGT+TGG 0.562869 5_2:+47095402 Msa0772740:CDS
CAAGTGGATTCAACTGGCAT+GGG 0.563374 5_2:-47094840 None:intergenic
TACCGTCCTCATTGATATGT+GGG 0.567195 5_2:+47095636 Msa0772740:CDS
CTGTATAACCTAGATGAAGA+TGG 0.571905 5_2:+47095664 Msa0772740:CDS
TCCATTAAGTGGGATTGTGG+TGG 0.573386 5_2:+47092565 Msa0772740:CDS
AGATGCTATGCCAAATCTAG+TGG 0.579360 5_2:+47096874 Msa0772740:CDS
GGTAAAACAGAAACAACTAA+AGG 0.579405 5_2:+47096112 Msa0772740:CDS
CCATTAAGTGGGATTGTGGT+GGG 0.584192 5_2:+47092566 Msa0772740:CDS
TCACATCAGCTCACACATGC+CGG 0.586887 5_2:+47094909 Msa0772740:CDS
GGATCCATTAAGTGGGATTG+TGG 0.589858 5_2:+47092562 Msa0772740:CDS
CCTTGTATTGCACATATGAA+GGG 0.592500 5_2:-47096819 None:intergenic
GGAATTTAAATTTCTCAACA+AGG 0.594998 5_2:-47094759 None:intergenic
CTTGAGAAGCTCTACATGAA+GGG 0.603967 5_2:+47097178 Msa0772740:CDS
GAATAAAAGGGATTTGATGG+AGG 0.605180 5_2:+47092901 Msa0772740:CDS
TGACGGAAAAGGGACACTGC+AGG 0.605597 5_2:-47094871 None:intergenic
AAATAATTGGCCTGATTGGT+GGG 0.605766 5_2:+47096031 Msa0772740:CDS
GCTGGAGGATATCAATGAGA+AGG 0.606242 5_2:+47095564 Msa0772740:CDS
CCTTCATATGTGCAATACAA+GGG 0.609693 5_2:+47096820 Msa0772740:CDS
TGTTGGGATCCACTAATCAA+AGG 0.612269 5_2:+47093121 Msa0772740:CDS
TGGTCGACCCAACGAATAGT+GGG 0.614031 5_2:-47092708 None:intergenic
AAAGAGCATAGAAACTTCCA+AGG 0.615432 5_2:+47092652 Msa0772740:CDS
TTATGGCGGATCCATTAAGT+GGG 0.617262 5_2:+47092555 Msa0772740:exon
GTTGAAGGCTGAATTGATGA+AGG 0.618701 5_2:+47093030 Msa0772740:CDS
CCGATTGGGAAATCTACTGA+GGG 0.622829 5_2:+47094678 Msa0772740:CDS
CAAGTTGGGAGTTTCTGAGA+CGG 0.626282 5_2:-47094578 None:intergenic
GATGAATTGCTAATTCTCTG+AGG 0.626726 5_2:-47095953 None:intergenic
ACAAAGTTTGAATATGCTGG+AGG 0.631427 5_2:+47095549 Msa0772740:CDS
TAGATAGTGAAAGCTTGTAA+GGG 0.633030 5_2:+47095391 Msa0772740:intron
TGCCCACATATCAATGAGGA+CGG 0.634056 5_2:-47095638 None:intergenic
ACTGCAGGATCATGATCAAG+TGG 0.638461 5_2:-47094856 None:intergenic
GCAATGACCTTTAGCACCAA+CGG 0.642212 5_2:-47095418 None:intergenic
AATTCCTGGTGATTAAATCG+TGG 0.644440 5_2:-47095708 None:intergenic
GATTCAATTGAGCATAGTGA+CGG 0.644962 5_2:-47094888 None:intergenic
AATCATGTGAATCAAATTAG+GGG 0.645379 5_2:+47092950 Msa0772740:CDS
AAGGCTGAATTGATGAAGGA+TGG 0.646837 5_2:+47093034 Msa0772740:CDS
ACCGATTGGGAAATCTACTG+AGG 0.647065 5_2:+47094677 Msa0772740:CDS
TATCAATGAGGACGGTAACA+GGG 0.651216 5_2:-47095630 None:intergenic
TCTTCAATAAGCATAGGCAA+GGG 0.655384 5_2:-47096781 None:intergenic
ACTTGATTAACTCAGAACGA+TGG 0.656351 5_2:-47096700 None:intergenic
AGCAAGGAATCATTAGTCGT+AGG 0.657138 5_2:+47096066 Msa0772740:CDS
AATTCATCAAAGCAAAGGGG+AGG 0.661256 5_2:+47095968 Msa0772740:CDS
TGGGTTGAACCGAATCAGCA+AGG 0.664549 5_2:+47096050 Msa0772740:CDS
GGATAGAGATCTTGTTGATG+AGG 0.665206 5_2:+47094930 Msa0772740:CDS
AAGTGGATTCAACTGGCATG+GGG 0.665225 5_2:-47094839 None:intergenic
GACTATTTCCTGAAGACCAG+AGG 0.666062 5_2:+47095605 Msa0772740:CDS
TCATCCACGATTTAATCACC+AGG 0.668033 5_2:+47095704 Msa0772740:CDS
CAAGTGATCTGTGATGAAGA+AGG 0.677590 5_2:+47097265 Msa0772740:CDS
GAGTTGCATAGTTATTATGG+CGG 0.678245 5_2:+47092541 Msa0772740:exon
AGCAATTCATCAAAGCAAAG+GGG 0.709536 5_2:+47095965 Msa0772740:CDS
TATGCAACCTGACAAAGCTG+AGG 0.719375 5_2:+47096580 Msa0772740:CDS
GTTCTGCCCACATATCAATG+AGG 0.724502 5_2:-47095642 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ATAGAGTTGCATAGTTATTA+TGG + chr5_2:47092538-47092557 Msa0772740:exon 25.0%
!! ATCTTTAGATTTGGAATGTT+AGG - chr5_2:47097313-47097332 None:intergenic 25.0%
! ATTAAGTTATGCTCTACTTT+AGG - chr5_2:47097343-47097362 None:intergenic 25.0%
! AAGTAGAGCATAACTTAATT+TGG + chr5_2:47097344-47097363 Msa0772740:CDS 25.0%
TATCTCTTCTAAATCAGAAC+AGG - chr5_2:47097059-47097078 None:intergenic 30.0%
CCAAATTTGACTACAGAATA+AGG - chr5_2:47097226-47097245 None:intergenic 30.0%
CCTTATTCTGTAGTCAAATT+TGG + chr5_2:47097223-47097242 Msa0772740:CDS 30.0%
GGCGTATATATCTTTAGATT+TGG - chr5_2:47097322-47097341 None:intergenic 30.0%
! CATAACTTAATTTGGCTTCA+TGG + chr5_2:47097352-47097371 Msa0772740:CDS 30.0%
GAGTTGCATAGTTATTATGG+CGG + chr5_2:47092541-47092560 Msa0772740:exon 35.0%
CAGAAATTACCGAACGATAT+TGG + chr5_2:47097142-47097161 Msa0772740:CDS 35.0%
ATGAAGAAGGTTATGCCTTA+TGG + chr5_2:47097278-47097297 Msa0772740:CDS 35.0%
TGAAGAAGGTTATGCCTTAT+GGG + chr5_2:47097279-47097298 Msa0772740:CDS 35.0%
GTTAGGAAATTGTTCCCATA+AGG - chr5_2:47097296-47097315 None:intergenic 35.0%
!! CGAGACAACATAGCTTGTTT+AGG - chr5_2:47097099-47097118 None:intergenic 40.0%
TTCACGTCACCAATATCGTT+CGG - chr5_2:47097154-47097173 None:intergenic 40.0%
CTTGAGAAGCTCTACATGAA+GGG + chr5_2:47097178-47097197 Msa0772740:CDS 40.0%
CAAGTGATCTGTGATGAAGA+AGG + chr5_2:47097265-47097284 Msa0772740:CDS 40.0%
GAGATACCAGAATCTGTTGC+AGG + chr5_2:47097073-47097092 Msa0772740:CDS 45.0%
TTTAGGCCTGCAACAGATTC+TGG - chr5_2:47097082-47097101 None:intergenic 45.0%
GCTTGAGAAGCTCTACATGA+AGG + chr5_2:47097177-47097196 Msa0772740:CDS 45.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 47092529 47097387 47092529 ID=Msa0772740;Name=Msa0772740
chr5_2 mRNA 47092529 47097387 47092529 ID=Msa0772740-mRNA-1;Parent=Msa0772740;Name=Msa0772740-mRNA-1;_AED=0.20;_eAED=0.20;_QI=28|0.25|0.2|1|1|1|5|0|818
chr5_2 exon 47092529 47093142 47092529 ID=Msa0772740-mRNA-1:exon:14136;Parent=Msa0772740-mRNA-1
chr5_2 exon 47094548 47094951 47094548 ID=Msa0772740-mRNA-1:exon:14137;Parent=Msa0772740-mRNA-1
chr5_2 exon 47095394 47095752 47095394 ID=Msa0772740-mRNA-1:exon:14138;Parent=Msa0772740-mRNA-1
chr5_2 exon 47095893 47096164 47095893 ID=Msa0772740-mRNA-1:exon:14139;Parent=Msa0772740-mRNA-1
chr5_2 exon 47096552 47097387 47096552 ID=Msa0772740-mRNA-1:exon:14140;Parent=Msa0772740-mRNA-1
chr5_2 five_prime_UTR 47092529 47092556 47092529 ID=Msa0772740-mRNA-1:five_prime_utr;Parent=Msa0772740-mRNA-1
chr5_2 CDS 47092557 47093142 47092557 ID=Msa0772740-mRNA-1:cds;Parent=Msa0772740-mRNA-1
chr5_2 CDS 47094548 47094951 47094548 ID=Msa0772740-mRNA-1:cds;Parent=Msa0772740-mRNA-1
chr5_2 CDS 47095394 47095752 47095394 ID=Msa0772740-mRNA-1:cds;Parent=Msa0772740-mRNA-1
chr5_2 CDS 47095893 47096164 47095893 ID=Msa0772740-mRNA-1:cds;Parent=Msa0772740-mRNA-1
chr5_2 CDS 47096552 47097387 47096552 ID=Msa0772740-mRNA-1:cds;Parent=Msa0772740-mRNA-1
Gene Sequence

>Msa0772740

ATGGCGGATCCATTAAGTGGGATTGTGGTGGGAAAGATTGCGAATCAAGCTTTTGAAACAATAAAAAATGGTCGAGATTTTGTCCCCACTCTCGAAAAGAGCATAGAAACTTCCAAGGATTTGGATCCTTTGGTTGAACAGATAAAAGGTTCCCACTATTCGTTGGGTCGACCAAGAGAAGAGATAGAAAGATTAGAGAAATACACAGACAATAAAGAGCTTATAAGAAAAAGCAAGAAGCTTAGTCTTAATCTATGGAAGTTTCTTCTTTTTTCTGGTCAACGAGCAAAGCTTCTGAAGCAATATGAGGCTTTTCAGAGATATTTGTCCATTGTGCAAATTGAGAATAAAAGGGATTTGATGGAGGTGTTGACTCATCTGAAAGATAATAATAATCATGTGAATCAAATTAGGGGTTTGTACGGTGCTCCTCAAGACCCTGAATTTATTGGAATGGTTAAGCAATTTAATGAGTTGAAGGCTGAATTGATGAAGGATGGTGCTTCTGTGCTTGTTTTGACTGGTTTGGGTGGATCTGGTAAAACCACTCTTGCTAAGAAGCTCTGTTGGGATCCACTAATCAAAGGCAAGTTTGGTGGAAACATCTTCTTTGTTACCGTCTCAGAAACTCCCAACTTGAAGAACATTGTAAAGACATTGTTTGAACATTGCAGACTTAAGGAGCCTGACTTTACAAACGACGAAGATGCAATTAACCGATTGGGAAATCTACTGAGGGAAGTTGGGAGAAATCCAATATTATTAGTCTTAGATGATGTTGGACCTAACTCAGTTGACCTTGTTGAGAAATTTAAATTCCAAATGCCAGATTATAAAATTCTGGTGACTTCAAGGGTTGGATTTAGAAGATTTGGCACCCCATGCCAGTTGAATCCACTTGATCATGATCCTGCAGTGTCCCTTTTCCGTCACTATGCTCAATTGAATCACATCAGCTCACACATGCCGGATAGAGATCTTGTTGATGAGATAGTGAAAGCTTGTAAGGGTTCACCGTTGGTGCTAAAGGTCATTGCTGGATCACTTCGTAATCAGCCTTTTGTGAAGTGGCTAGATATGAAGGAACGTTTAAATAGTCGATCCATTCTTGAGTCTAATAGTACTGACTTGCTTTGTCGCCTTCAACAAAGTTTGAATATGCTGGAGGATATCAATGAGAAGGAGTGCTTCATGGATATGGGACTATTTCCTGAAGACCAGAGGATCCCTGTTACCGTCCTCATTGATATGTGGGCAGAACTGTATAACCTAGATGAAGATGGTATTAAAGCGATGACTATCATCCACGATTTAATCACCAGGAATTTTATTAATGTCATAGCTACAAGGCAAGCTGCAACAAAAACAGACATGTACTACAATAACCACTATGTCATGCTGCATGATCTCCTCAGAGAATTAGCAATTCATCAAAGCAAAGGGGAGGCATTTGAACAGAGAAAAAGATTGATCATTGACTTAAATGGAAATAATTGGCCTGATTGGTGGGTTGAACCGAATCAGCAAGGAATCATTAGTCGTAGGTACTCATTCATTACCGGAATGTTGGTAAAACAGAAACAACTAAAGGTTGCTGCCAGGATATTGTGCATATCAACTGATGAAAATTTTTCTTCGGATTGGTGTGATATGCAACCTGACAAAGCTGAGGTTCTGGTTTTGAATCTTCGGTCTGACCAGTACTCATTGCCGGATTTCACAAAGAAAATGAGCAAACTGAAAGTTTTAATAGTCACAAATTACGGTTTCCATCGTTCTGAGTTAATCAAGTTTGAGCTACTTGGGTTTTTGTCAAACTTGAAAAGAATAAGGTTGGAGAAAGTTTCAGTCCCTTGCCTATGCTTATTGAAGAATCTGCGAAAGTTATCCCTTCATATGTGCAATACAAGGGATGCTTTTGAAAACTGTTCTATCCAAATATCAGATGCTATGCCAAATCTAGTGGAGTTGAGCATTGATTATTGTAATGATTTGATTAAATTGCCTGATGGATTCTCTAACATTACTACATTGAAGAAGATAAGTATCACAAACTGTCACAAGCTTTCAGCAATGCCTCAAGATATTGGAAAGTTGGAGAATTTGGAAGTGCTAAGGCTTTGTTCCTGTTCTGATTTAGAAGAGATACCAGAATCTGTTGCAGGCCTAAACAAGCTATGTTGTCTCGACATCTCAGACTGTGTGAGTCTTCAGAAATTACCGAACGATATTGGTGACGTGAAAAAGCTTGAGAAGCTCTACATGAAGGGTTGCTCAAACTTGAGTGAATTGCCTTATTCTGTAGTCAAATTTGGAAATTTAAAGCATGAAATGCAAGTGATCTGTGATGAAGAAGGTTATGCCTTATGGGAACAATTTCCTAACATTCCAAATCTAAAGATATATACGCCTAAAGTAGAGCATAACTTAATTTGGCTTCATGGAACTCGTTCCTGA

Protein sequence

>Msa0772740

MADPLSGIVVGKIANQAFETIKNGRDFVPTLEKSIETSKDLDPLVEQIKGSHYSLGRPREEIERLEKYTDNKELIRKSKKLSLNLWKFLLFSGQRAKLLKQYEAFQRYLSIVQIENKRDLMEVLTHLKDNNNHVNQIRGLYGAPQDPEFIGMVKQFNELKAELMKDGASVLVLTGLGGSGKTTLAKKLCWDPLIKGKFGGNIFFVTVSETPNLKNIVKTLFEHCRLKEPDFTNDEDAINRLGNLLREVGRNPILLVLDDVGPNSVDLVEKFKFQMPDYKILVTSRVGFRRFGTPCQLNPLDHDPAVSLFRHYAQLNHISSHMPDRDLVDEIVKACKGSPLVLKVIAGSLRNQPFVKWLDMKERLNSRSILESNSTDLLCRLQQSLNMLEDINEKECFMDMGLFPEDQRIPVTVLIDMWAELYNLDEDGIKAMTIIHDLITRNFINVIATRQAATKTDMYYNNHYVMLHDLLRELAIHQSKGEAFEQRKRLIIDLNGNNWPDWWVEPNQQGIISRRYSFITGMLVKQKQLKVAARILCISTDENFSSDWCDMQPDKAEVLVLNLRSDQYSLPDFTKKMSKLKVLIVTNYGFHRSELIKFELLGFLSNLKRIRLEKVSVPCLCLLKNLRKLSLHMCNTRDAFENCSIQISDAMPNLVELSIDYCNDLIKLPDGFSNITTLKKISITNCHKLSAMPQDIGKLENLEVLRLCSCSDLEEIPESVAGLNKLCCLDISDCVSLQKLPNDIGDVKKLEKLYMKGCSNLSELPYSVVKFGNLKHEMQVICDEEGYALWEQFPNIPNLKIYTPKVEHNLIWLHGTRS*