Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573890 | XP_013447314.1 | 50.427 | 234 | 37 | 5 | 1 | 195 | 1 | 194 | 5.59e-58 | 199 |
| Msa0573890 | XP_013447314.1 | 89.500 | 200 | 19 | 1 | 205 | 404 | 10 | 207 | 2.14e-124 | 368 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573890 | I3S9W1 | 50.427 | 234 | 37 | 5 | 1 | 195 | 1 | 194 | 2.67e-58 | 199 |
| Msa0573890 | I3S9W1 | 89.500 | 200 | 19 | 1 | 205 | 404 | 10 | 207 | 1.02e-124 | 368 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0573890 | 0.810156 | 1.325866e-50 | -8.615850e-47 |
| Msa0002250 | Msa0573890 | 0.814848 | 1.249936e-51 | -8.615850e-47 |
| Msa0007470 | Msa0573890 | 0.813074 | 3.076541e-51 | -8.615850e-47 |
| Msa0015090 | Msa0573890 | 0.817613 | 3.012064e-52 | -8.615850e-47 |
| Msa0017320 | Msa0573890 | 0.805734 | 1.156920e-49 | -8.615850e-47 |
| Msa0026630 | Msa0573890 | 0.825671 | 4.128374e-54 | -8.615850e-47 |
| Msa0032080 | Msa0573890 | 0.802936 | 4.427206e-49 | -8.615850e-47 |
| Msa0043980 | Msa0573890 | 0.801387 | 9.222660e-49 | -8.615850e-47 |
| Msa0049750 | Msa0573890 | 0.810787 | 9.686899e-51 | -8.615850e-47 |
| Msa0049910 | Msa0573890 | 0.800069 | 1.712903e-48 | -8.615850e-47 |
| Msa0053860 | Msa0573890 | 0.810825 | 9.505084e-51 | -8.615850e-47 |
| Msa0060070 | Msa0573890 | 0.804113 | 2.523839e-49 | -8.615850e-47 |
| Msa0061220 | Msa0573890 | 0.803525 | 3.343574e-49 | -8.615850e-47 |
| Msa0061500 | Msa0573890 | 0.805547 | 1.266407e-49 | -8.615850e-47 |
| Msa0073870 | Msa0573890 | 0.816609 | 5.064520e-52 | -8.615850e-47 |
| Msa0079130 | Msa0573890 | 0.801022 | 1.095203e-48 | -8.615850e-47 |
| Msa0079370 | Msa0573890 | 0.804458 | 2.139144e-49 | -8.615850e-47 |
| Msa0090970 | Msa0573890 | 0.821919 | 3.124679e-53 | -8.615850e-47 |
| Msa0092410 | Msa0573890 | 0.814414 | 1.559740e-51 | -8.615850e-47 |
| Msa0098290 | Msa0573890 | 0.803654 | 3.144489e-49 | -8.615850e-47 |
| Msa0101860 | Msa0573890 | 0.812044 | 5.168849e-51 | -8.615850e-47 |
| Msa0104230 | Msa0573890 | 0.815447 | 9.200830e-52 | -8.615850e-47 |
| Msa0104240 | Msa0573890 | 0.807366 | 5.236592e-50 | -8.615850e-47 |
| Msa0117520 | Msa0573890 | 0.852778 | 3.693549e-61 | -8.615850e-47 |
| Msa0136630 | Msa0573890 | 0.814822 | 1.266428e-51 | -8.615850e-47 |
| Msa0138020 | Msa0573890 | 0.848958 | 4.397163e-60 | -8.615850e-47 |
| Msa0144530 | Msa0573890 | 0.815676 | 8.181274e-52 | -8.615850e-47 |
| Msa0150230 | Msa0573890 | 0.803673 | 3.116022e-49 | -8.615850e-47 |
| Msa0152560 | Msa0573890 | 0.842981 | 1.854672e-58 | -8.615850e-47 |
| Msa0160960 | Msa0573890 | 0.848319 | 6.611590e-60 | -8.615850e-47 |
| Msa0172080 | Msa0573890 | 0.802122 | 6.515350e-49 | -8.615850e-47 |
| Msa0187310 | Msa0573890 | 0.820767 | 5.765187e-53 | -8.615850e-47 |
| Msa0187830 | Msa0573890 | 0.832206 | 1.078814e-55 | -8.615850e-47 |
| Msa0201570 | Msa0573890 | 0.810520 | 1.106473e-50 | -8.615850e-47 |
| Msa0218370 | Msa0573890 | 0.832168 | 1.102857e-55 | -8.615850e-47 |
| Msa0222980 | Msa0573890 | 0.814785 | 1.291034e-51 | -8.615850e-47 |
| Msa0227360 | Msa0573890 | 0.817713 | 2.858344e-52 | -8.615850e-47 |
| Msa0231060 | Msa0573890 | 0.822528 | 2.257027e-53 | -8.615850e-47 |
| Msa0232020 | Msa0573890 | 0.807020 | 6.197311e-50 | -8.615850e-47 |
| Msa0236420 | Msa0573890 | 0.828359 | 9.393069e-55 | -8.615850e-47 |
| Msa0364790 | Msa0573890 | 0.812434 | 4.248541e-51 | -8.615850e-47 |
| Msa0386010 | Msa0573890 | 0.809481 | 1.852673e-50 | -8.615850e-47 |
| Msa0388730 | Msa0573890 | 0.817870 | 2.634788e-52 | -8.615850e-47 |
| Msa0389210 | Msa0573890 | 0.833688 | 4.618498e-56 | -8.615850e-47 |
| Msa0394470 | Msa0573890 | 0.802862 | 4.585776e-49 | -8.615850e-47 |
| Msa0395750 | Msa0573890 | 0.804751 | 1.858741e-49 | -8.615850e-47 |
| Msa0397270 | Msa0573890 | 0.813210 | 2.871903e-51 | -8.615850e-47 |
| Msa0427580 | Msa0573890 | 0.807873 | 4.085054e-50 | -8.615850e-47 |
| Msa0476680 | Msa0573890 | 0.802735 | 4.871517e-49 | -8.615850e-47 |
| Msa0240270 | Msa0573890 | 0.850907 | 1.253423e-60 | -8.615850e-47 |
| Msa0241140 | Msa0573890 | 0.805376 | 1.375595e-49 | -8.615850e-47 |
| Msa0264830 | Msa0573890 | 0.817163 | 3.801845e-52 | -8.615850e-47 |
| Msa0267370 | Msa0573890 | 0.813328 | 2.705692e-51 | -8.615850e-47 |
| Msa0269560 | Msa0573890 | 0.803939 | 2.743231e-49 | -8.615850e-47 |
| Msa0270960 | Msa0573890 | 0.819715 | 1.004061e-52 | -8.615850e-47 |
| Msa0278070 | Msa0573890 | 0.816606 | 5.072318e-52 | -8.615850e-47 |
| Msa0278580 | Msa0573890 | 0.824095 | 9.720254e-54 | -8.615850e-47 |
| Msa0287870 | Msa0573890 | 0.840397 | 8.910911e-58 | -8.615850e-47 |
| Msa0299660 | Msa0573890 | 0.827780 | 1.295051e-54 | -8.615850e-47 |
| Msa0302730 | Msa0573890 | 0.803741 | 3.015850e-49 | -8.615850e-47 |
| Msa0302840 | Msa0573890 | 0.825570 | 4.363039e-54 | -8.615850e-47 |
| Msa0302870 | Msa0573890 | 0.803140 | 4.018844e-49 | -8.615850e-47 |
| Msa0305410 | Msa0573890 | 0.800479 | 1.413583e-48 | -8.615850e-47 |
| Msa0317520 | Msa0573890 | 0.804898 | 1.731725e-49 | -8.615850e-47 |
| Msa0319020 | Msa0573890 | 0.807370 | 5.224930e-50 | -8.615850e-47 |
| Msa0321080 | Msa0573890 | 0.805501 | 1.295054e-49 | -8.615850e-47 |
| Msa0340340 | Msa0573890 | 0.817060 | 4.010862e-52 | -8.615850e-47 |
| Msa0347750 | Msa0573890 | 0.800220 | 1.596444e-48 | -8.615850e-47 |
| Msa0363790 | Msa0573890 | 0.804977 | 1.666836e-49 | -8.615850e-47 |
| Msa0484800 | Msa0573890 | 0.809698 | 1.663518e-50 | -8.615850e-47 |
| Msa0518170 | Msa0573890 | 0.837080 | 6.418940e-57 | -8.615850e-47 |
| Msa0518380 | Msa0573890 | 0.802252 | 6.126009e-49 | -8.615850e-47 |
| Msa0519160 | Msa0573890 | 0.824487 | 7.858274e-54 | -8.615850e-47 |
| Msa0521010 | Msa0573890 | 0.808235 | 3.421490e-50 | -8.615850e-47 |
| Msa0545050 | Msa0573890 | 0.849906 | 2.394204e-60 | -8.615850e-47 |
| Msa0566750 | Msa0573890 | 0.803596 | 3.232417e-49 | -8.615850e-47 |
| Msa0572150 | Msa0573890 | 0.814171 | 1.764404e-51 | -8.615850e-47 |
| Msa0573890 | Msa0574600 | 0.841523 | 4.513480e-58 | -8.615850e-47 |
| Msa0573890 | Msa0574730 | 0.817829 | 2.691885e-52 | -8.615850e-47 |
| Msa0573890 | Msa0600590 | 0.837628 | 4.647236e-57 | -8.615850e-47 |
| Msa0573890 | Msa0613340 | 0.829825 | 4.145345e-55 | -8.615850e-47 |
| Msa0573890 | Msa0641130 | 0.840789 | 7.036329e-58 | -8.615850e-47 |
| Msa0573890 | Msa0657930 | -0.802936 | 4.428543e-49 | -8.615850e-47 |
| Msa0573890 | Msa0689780 | 0.808739 | 2.670581e-50 | -8.615850e-47 |
| Msa0573890 | Msa0705990 | 0.808268 | 3.366398e-50 | -8.615850e-47 |
| Msa0573890 | Msa0708310 | 0.820665 | 6.084323e-53 | -8.615850e-47 |
| Msa0573890 | Msa0711150 | 0.822279 | 2.579569e-53 | -8.615850e-47 |
| Msa0573890 | Msa0743870 | 0.814619 | 1.405207e-51 | -8.615850e-47 |
| Msa0573890 | Msa0750850 | 0.819961 | 8.823481e-53 | -8.615850e-47 |
| Msa0573890 | Msa0755180 | 0.809443 | 1.887954e-50 | -8.615850e-47 |
| Msa0573890 | Msa0763890 | 0.801374 | 9.280788e-49 | -8.615850e-47 |
| Msa0573890 | Msa0763920 | 0.820747 | 5.826275e-53 | -8.615850e-47 |
| Msa0573890 | Msa0772740 | 0.812133 | 4.943054e-51 | -8.615850e-47 |
| Msa0573890 | Msa0795340 | 0.814930 | 1.198642e-51 | -8.615850e-47 |
| Msa0573890 | Msa0797770 | 0.802841 | 4.633619e-49 | -8.615850e-47 |
| Msa0573890 | Msa0805910 | 0.800773 | 1.231324e-48 | -8.615850e-47 |
| Msa0573890 | Msa0817460 | 0.802926 | 4.448434e-49 | -8.615850e-47 |
| Msa0573890 | Msa0823440 | 0.822362 | 2.466656e-53 | -8.615850e-47 |
| Msa0573890 | Msa0823540 | 0.812264 | 4.627191e-51 | -8.615850e-47 |
| Msa0573890 | Msa0828200 | 0.809682 | 1.677413e-50 | -8.615850e-47 |
| Msa0573890 | Msa0831850 | 0.809149 | 2.182739e-50 | -8.615850e-47 |
| Msa0573890 | Msa0835230 | 0.815659 | 8.253730e-52 | -8.615850e-47 |
| Msa0573890 | Msa0844110 | 0.826094 | 3.275300e-54 | -8.615850e-47 |
| Msa0573890 | Msa0861470 | 0.808126 | 3.609627e-50 | -8.615850e-47 |
| Msa0573890 | Msa0861570 | 0.801087 | 1.062345e-48 | -8.615850e-47 |
| Msa0573890 | Msa0888260 | 0.821865 | 3.216232e-53 | -8.615850e-47 |
| Msa0573890 | Msa0894710 | 0.829908 | 3.956209e-55 | -8.615850e-47 |
| Msa0573890 | Msa0896530 | 0.823379 | 1.429805e-53 | -8.615850e-47 |
| Msa0573890 | Msa0910620 | 0.813961 | 1.963745e-51 | -8.615850e-47 |
| Msa0573890 | Msa0921420 | 0.805596 | 1.236877e-49 | -8.615850e-47 |
| Msa0573890 | Msa0960390 | 0.820870 | 5.457808e-53 | -8.615850e-47 |
| Msa0573890 | Msa0965080 | 0.804866 | 1.758327e-49 | -8.615850e-47 |
| Msa0573890 | Msa0965290 | 0.803195 | 3.915009e-49 | -8.615850e-47 |
| Msa0573890 | Msa0970480 | 0.805185 | 1.508274e-49 | -8.615850e-47 |
| Msa0573890 | Msa0972960 | 0.810667 | 1.028654e-50 | -8.615850e-47 |
| Msa0573890 | Msa0994910 | 0.812560 | 3.986455e-51 | -8.615850e-47 |
| Msa0573890 | Msa0999680 | 0.800897 | 1.161739e-48 | -8.615850e-47 |
| Msa0573890 | Msa1011090 | 0.805581 | 1.245621e-49 | -8.615850e-47 |
| Msa0573890 | Msa1013070 | 0.821340 | 4.254460e-53 | -8.615850e-47 |
| Msa0573890 | Msa1023310 | 0.834396 | 3.071153e-56 | -8.615850e-47 |
| Msa0573890 | Msa1030810 | 0.810767 | 9.786527e-51 | -8.615850e-47 |
| Msa0573890 | Msa1036610 | 0.805094 | 1.575477e-49 | -8.615850e-47 |
| Msa0573890 | Msa1048220 | 0.817226 | 3.681398e-52 | -8.615850e-47 |
| Msa0573890 | Msa1062040 | 0.805406 | 1.355873e-49 | -8.615850e-47 |
| Msa0573890 | Msa1068480 | 0.805641 | 1.210036e-49 | -8.615850e-47 |
| Msa0573890 | Msa1069890 | 0.815122 | 1.086907e-51 | -8.615850e-47 |
| Msa0573890 | Msa1089460 | 0.817401 | 3.362011e-52 | -8.615850e-47 |
| Msa0573890 | Msa1093100 | 0.809362 | 1.964103e-50 | -8.615850e-47 |
| Msa0573890 | Msa1107190 | 0.804607 | 1.991492e-49 | -8.615850e-47 |
| Msa0573890 | Msa1107200 | 0.838641 | 2.549555e-57 | -8.615850e-47 |
| Msa0573890 | Msa1107260 | 0.802991 | 4.312921e-49 | -8.615850e-47 |
| Msa0573890 | Msa1111870 | 0.805087 | 1.580728e-49 | -8.615850e-47 |
| Msa0573890 | Msa1122150 | 0.821982 | 3.022397e-53 | -8.615850e-47 |
| Msa0573890 | Msa1150780 | 0.817088 | 3.952450e-52 | -8.615850e-47 |
| Msa0573890 | Msa1160560 | 0.835828 | 1.337206e-56 | -8.615850e-47 |
| Msa0573890 | Msa1162780 | 0.818487 | 1.910865e-52 | -8.615850e-47 |
| Msa0573890 | Msa1163090 | 0.806334 | 8.650215e-50 | -8.615850e-47 |
| Msa0573890 | Msa1173490 | 0.804286 | 2.323492e-49 | -8.615850e-47 |
| Msa0573890 | Msa1185110 | 0.801673 | 8.059774e-49 | -8.615850e-47 |
| Msa0573890 | Msa1200250 | 0.818986 | 1.472126e-52 | -8.615850e-47 |
| Msa0573890 | Msa1207310 | 0.829471 | 5.052771e-55 | -8.615850e-47 |
| Msa0573890 | Msa1212050 | 0.830273 | 3.222037e-55 | -8.615850e-47 |
| Msa0573890 | Msa1212130 | 0.804846 | 1.775559e-49 | -8.615850e-47 |
| Msa0573890 | Msa1214170 | 0.815865 | 7.424826e-52 | -8.615850e-47 |
| Msa0573890 | Msa1221330 | 0.808837 | 2.545522e-50 | -8.615850e-47 |
| Msa0573890 | Msa1236440 | 0.835864 | 1.309280e-56 | -8.615850e-47 |
| Msa0573890 | Msa1239620 | 0.819120 | 1.371966e-52 | -8.615850e-47 |
| Msa0573890 | Msa1246360 | 0.809017 | 2.329508e-50 | -8.615850e-47 |
| Msa0573890 | Msa1246700 | 0.823947 | 1.052400e-53 | -8.615850e-47 |
| Msa0573890 | Msa1256060 | 0.807384 | 5.190677e-50 | -8.615850e-47 |
| Msa0573890 | Msa1259860 | 0.837089 | 6.384819e-57 | -8.615850e-47 |
| Msa0573890 | Msa1260680 | 0.846049 | 2.772526e-59 | -8.615850e-47 |
| Msa0573890 | Msa1270660 | 0.803384 | 3.577677e-49 | -8.615850e-47 |
| Msa0573890 | Msa1277670 | 0.833119 | 6.403365e-56 | -8.615850e-47 |
| Msa0573890 | Msa1279480 | 0.826659 | 2.402709e-54 | -8.615850e-47 |
| Msa0573890 | Msa1280170 | 0.804882 | 1.745365e-49 | -8.615850e-47 |
| Msa0573890 | Msa1295330 | 0.800338 | 1.510107e-48 | -8.615850e-47 |
| Msa0573890 | Msa1307180 | 0.800923 | 1.147407e-48 | -8.615850e-47 |
| Msa0573890 | Msa1316360 | 0.807486 | 4.937832e-50 | -8.615850e-47 |
| Msa0573890 | Msa1335230 | 0.815484 | 9.026972e-52 | -8.615850e-47 |
| Msa0573890 | Msa1338400 | 0.824384 | 8.312142e-54 | -8.615850e-47 |
| Msa0573890 | Msa1352280 | -0.839246 | 1.776724e-57 | -8.615850e-47 |
| Msa0573890 | Msa1353890 | 0.826103 | 3.259977e-54 | -8.615850e-47 |
| Msa0573890 | Msa1355890 | 0.854997 | 8.475760e-62 | -8.615850e-47 |
| Msa0573890 | Msa1360020 | 0.818199 | 2.220550e-52 | -8.615850e-47 |
| Msa0573890 | Msa1365270 | 0.826697 | 2.352763e-54 | -8.615850e-47 |
| Msa0573890 | Msa1368360 | 0.804135 | 2.498206e-49 | -8.615850e-47 |
| Msa0573890 | Msa1369920 | -0.813590 | 2.370375e-51 | -8.615850e-47 |
| Msa0573890 | Msa1376450 | 0.811465 | 6.907092e-51 | -8.615850e-47 |
| Msa0573890 | Msa1378040 | 0.806536 | 7.843959e-50 | -8.615850e-47 |
| Msa0573890 | Msa1380220 | 0.820698 | 5.978868e-53 | -8.615850e-47 |
| Msa0573890 | Msa1386890 | 0.810043 | 1.402767e-50 | -8.615850e-47 |
| Msa0573890 | Msa1400930 | 0.828252 | 9.969310e-55 | -8.615850e-47 |
| Msa0573890 | Msa1408340 | 0.802106 | 6.564723e-49 | -8.615850e-47 |
| Msa0573890 | Msa1412130 | 0.825906 | 3.630179e-54 | -8.615850e-47 |
| Msa0573890 | Msa1419840 | 0.812685 | 3.743831e-51 | -8.615850e-47 |
| Msa0573890 | Msa1420270 | 0.814068 | 1.859766e-51 | -8.615850e-47 |
| Msa0573890 | Msa1423820 | 0.807201 | 5.674744e-50 | -8.615850e-47 |
| Msa0573890 | Msa1424630 | 0.833766 | 4.415704e-56 | -8.615850e-47 |
| Msa0573890 | Msa1425260 | 0.834490 | 2.908928e-56 | -8.615850e-47 |
| Msa0573890 | Msa1428780 | 0.801061 | 1.075467e-48 | -8.615850e-47 |
| Msa0573890 | Msa1430130 | 0.838027 | 3.669139e-57 | -8.615850e-47 |
| Msa0573890 | Msa1430550 | 0.808997 | 2.352202e-50 | -8.615850e-47 |
| Msa0573890 | Msa1437730 | 0.800521 | 1.385866e-48 | -8.615850e-47 |
| Msa0573890 | Msa1442920 | 0.833922 | 4.036157e-56 | -8.615850e-47 |
| Msa0573890 | Msa1457160 | 0.833365 | 5.561743e-56 | -8.615850e-47 |
| Msa0573890 | Msa1458680 | 0.838413 | 2.919030e-57 | -8.615850e-47 |
| Msa0573890 | Msa1460750 | 0.837829 | 4.126674e-57 | -8.615850e-47 |
| Msa0573890 | Msa1462360 | 0.800967 | 1.124020e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573890 | MtrunA17_Chr8g0390061 | 89.500 | 200 | 19 | 1 | 205 | 404 | 10 | 207 | 1.97e-128 | 368 |
| Msa0573890 | MtrunA17_Chr8g0390061 | 50.427 | 234 | 37 | 5 | 1 | 195 | 1 | 194 | 5.14e-62 | 199 |
| Msa0573890 | MtrunA17_Chr8g0390051 | 65.106 | 235 | 32 | 3 | 1 | 195 | 1 | 225 | 1.48e-94 | 283 |
| Msa0573890 | MtrunA17_Chr8g0390051 | 60.000 | 230 | 61 | 3 | 205 | 404 | 10 | 238 | 2.98e-87 | 265 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 55 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATGATGTTGAAATGAATT+TGG | 0.258979 | 4_1:+77197387 | Msa0573890:CDS |
| TAATGATGTTGAAATGAATT+TGG | 0.258979 | 4_1:+77203220 | Msa0573890:CDS |
| ATTGAAGTTGATAATAGTTT+TGG | 0.297080 | 4_1:+77196823 | Msa0573890:CDS |
| AAGACAGAAACAAAGAAATT+TGG | 0.303541 | 4_1:+77202828 | Msa0573890:CDS |
| AAGAGTGATGACAAAGAAAA+AGG | 0.308555 | 4_1:+77197034 | Msa0573890:CDS |
| CAAAGCTTTCATGATGAAAA+TGG | 0.312117 | 4_1:+77197238 | Msa0573890:CDS |
| ATTGAAGATGATGCTACTTT+TGG | 0.318948 | 4_1:+77202773 | Msa0573890:CDS |
| GTTTCCCTTCTCTTTAATTC+CGG | 0.323029 | 4_1:-77197152 | None:intergenic |
| CAAAGCTTTCATGATGAAAA+TGG | 0.325691 | 4_1:+77203101 | Msa0573890:CDS |
| CAGGTTTGCAATCAAGAAAT+AGG | 0.331402 | 4_1:+77203312 | Msa0573890:CDS |
| GAAATGGAGTATGAATCTTT+TGG | 0.345782 | 4_1:+77196761 | Msa0573890:exon |
| ACTGTTCATGTTGATACTTC+AGG | 0.350166 | 4_1:+77203293 | Msa0573890:CDS |
| TACTATTACACCATTATTTG+CGG | 0.385695 | 4_1:-77203066 | None:intergenic |
| ATTCAAATCAAGCTTGTTGC+TGG | 0.398775 | 4_1:+77202852 | Msa0573890:CDS |
| TCCTGGATTAATTTCTTCAT+CGG | 0.408486 | 4_1:-77197434 | None:intergenic |
| GGATGTGGACATAAATTGTT+TGG | 0.414508 | 4_1:+77202873 | Msa0573890:CDS |
| GAATCTACCTTTCCTGAGTC+AGG | 0.424703 | 4_1:-77202936 | None:intergenic |
| AAAAGGATCTAGCATAAAAC+AGG | 0.439916 | 4_1:+77196799 | Msa0573890:CDS |
| TTGAACCATATGCAGAGAAA+TGG | 0.442521 | 4_1:+77196745 | None:intergenic |
| TAAACATGAGTAGTACTTCC+TGG | 0.448798 | 4_1:-77197451 | None:intergenic |
| AAAAGGGTCTAACGTAAAAC+AGG | 0.453639 | 4_1:+77202749 | Msa0573890:CDS |
| CTTCCTACAACAAGCTTGGT+TGG | 0.453707 | 4_1:-77196905 | None:intergenic |
| ATCAAGCTTGTTGCTGGATG+TGG | 0.461106 | 4_1:+77202858 | Msa0573890:CDS |
| AGAATGGAGTATCAATCTCT+TGG | 0.461610 | 4_1:+77202715 | Msa0573890:CDS |
| GTGGAGAGTGCCGCAAATAA+TGG | 0.466076 | 4_1:+77203056 | Msa0573890:CDS |
| GACAAGGATGTTGAAGAAAC+CGG | 0.472516 | 4_1:+77197133 | Msa0573890:CDS |
| AATGTTTATAAAGTCACATA+TGG | 0.478201 | 4_1:+77197358 | Msa0573890:CDS |
| GCCGATGAAGAAATTAATCC+AGG | 0.489581 | 4_1:+77197433 | Msa0573890:CDS |
| CATAAATTGTTTGGACGGAA+AGG | 0.490271 | 4_1:+77202882 | Msa0573890:CDS |
| GAAATCAAAATTCTCATTGA+AGG | 0.492366 | 4_1:+77197105 | Msa0573890:CDS |
| GTTGAATTAATGCAGAAGAA+TGG | 0.500286 | 4_1:+77202699 | Msa0573890:intron |
| TCAGGAAAAGCTCTTTCATC+GGG | 0.511579 | 4_1:-77202918 | None:intergenic |
| TCCACTTCCTACAACAAGCT+TGG | 0.517256 | 4_1:-77196909 | None:intergenic |
| GATGTTGAAATGAATTTGGA+GGG | 0.522379 | 4_1:+77197391 | Msa0573890:CDS |
| ATAAATTGTTTGGACGGAAA+GGG | 0.528425 | 4_1:+77202883 | Msa0573890:CDS |
| GTCAGGAAAAGCTCTTTCAT+CGG | 0.531583 | 4_1:-77202919 | None:intergenic |
| AGTATTTATGAAGTCACGTA+TGG | 0.536293 | 4_1:+77203191 | Msa0573890:CDS |
| AAAATTCTCATTGAAGGAGA+AGG | 0.537516 | 4_1:+77197111 | Msa0573890:CDS |
| TCAGGAAAGGTAGATTCTGT+TGG | 0.537763 | 4_1:+77196992 | Msa0573890:intron |
| TCAGGAAAGGTAGATTCTGT+TGG | 0.537763 | 4_1:+77202942 | Msa0573890:CDS |
| GTAGACGAAGAAATTAATAC+AGG | 0.538396 | 4_1:+77203266 | Msa0573890:CDS |
| CTGCAAAATGATATGCATGT+TGG | 0.552120 | 4_1:+77197073 | Msa0573890:CDS |
| GATGTTGAAATGAATTTGGA+AGG | 0.554461 | 4_1:+77203224 | Msa0573890:CDS |
| GAAACCGGAATTAAAGAGAA+GGG | 0.561260 | 4_1:+77197148 | Msa0573890:CDS |
| GTGGACATAAATTGTTTGGA+CGG | 0.566125 | 4_1:+77202877 | Msa0573890:CDS |
| TGATGTTGAAATGAATTTGG+AGG | 0.570754 | 4_1:+77197390 | Msa0573890:CDS |
| AGAAACCGGAATTAAAGAGA+AGG | 0.597087 | 4_1:+77197147 | Msa0573890:CDS |
| CTCATTGAAGGAGAAGGACA+AGG | 0.599240 | 4_1:+77197117 | Msa0573890:CDS |
| ACAACTTGGAGTTGAAGAGA+AGG | 0.600247 | 4_1:+77203010 | Msa0573890:CDS |
| CAACTTGGAGTTGAAGAGAA+GGG | 0.601023 | 4_1:+77203011 | Msa0573890:CDS |
| CTTGATTTGATATAACAACC+AGG | 0.620765 | 4_1:-77202805 | None:intergenic |
| GTTTGCAATCAAGAAATAGG+TGG | 0.639196 | 4_1:+77203315 | Msa0573890:CDS |
| GAAAATGGTGTTCCGCCTGA+CGG | 0.644155 | 4_1:+77203116 | Msa0573890:CDS |
| TGGTGTAATAGTAATAGATG+AGG | 0.675736 | 4_1:+77203076 | Msa0573890:CDS |
| AATGGTGTTCCGCCTGACGG+CGG | 0.683985 | 4_1:+77203119 | Msa0573890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAAAATTCTAATTTTTTTT+TGG | - | chr4_1:77197943-77197962 | None:intergenic | 10.0% |
| !!! | TTGTTTATTTTATTTTACTA+TGG | - | chr4_1:77201342-77201361 | None:intergenic | 10.0% |
| !! | AAAATAAAATAAACAAGAAT+TGG | + | chr4_1:77201346-77201365 | Msa0573890:intron | 10.0% |
| !!! | TTGTTTATTTTATTTTACTA+TGG | - | chr4_1:77201342-77201361 | None:intergenic | 10.0% |
| !!! | TTGTTTATTTTATTTTACTA+TGG | - | chr4_1:77201342-77201361 | None:intergenic | 10.0% |
| !!! | TAGTGATTGAAAATTTTATA+GGG | - | chr4_1:77197838-77197857 | None:intergenic | 15.0% |
| !!! | TACATATGATTTTACTTTAA+AGG | + | chr4_1:77198128-77198147 | Msa0573890:intron | 15.0% |
| !! | TTTCATTGATATTATTACTT+GGG | - | chr4_1:77198267-77198286 | None:intergenic | 15.0% |
| !! | ATTTCATTGATATTATTACT+TGG | - | chr4_1:77198268-77198287 | None:intergenic | 15.0% |
| !!! | AAAATTTTGGAAATGAAAAA+TGG | - | chr4_1:77198450-77198469 | None:intergenic | 15.0% |
| !! | GCTGTTTAAAAAAATAATAA+TGG | - | chr4_1:77198557-77198576 | None:intergenic | 15.0% |
| !!! | AAATCTAGCTTTTATAATAA+AGG | - | chr4_1:77198584-77198603 | None:intergenic | 15.0% |
| !!! | TTTTTTCAAGTTTGAATAAA+CGG | - | chr4_1:77198726-77198745 | None:intergenic | 15.0% |
| !!! | TGTTAATATTTGAAATAAGT+AGG | - | chr4_1:77199129-77199148 | None:intergenic | 15.0% |
| !! | TAATTATTACGTATTGTTAA+TGG | + | chr4_1:77199407-77199426 | Msa0573890:intron | 15.0% |
| !!! | TATTAATCATAGTTTTCTAT+TGG | - | chr4_1:77199941-77199960 | None:intergenic | 15.0% |
| !! | TTGAATACGTAAAAAAAAAA+AGG | + | chr4_1:77200592-77200611 | Msa0573890:intron | 15.0% |
| !! | TAAAATAAACAAGAATTGAT+TGG | + | chr4_1:77201423-77201442 | Msa0573890:intron | 15.0% |
| !! | TAAAAAGTCAACTAAAATAA+TGG | - | chr4_1:77201663-77201682 | None:intergenic | 15.0% |
| !!! | ATTATTTTAGTTGACTTTTT+AGG | + | chr4_1:77201662-77201681 | Msa0573890:intron | 15.0% |
| !!! | TAAGAAACAATTAACTTTTT+TGG | - | chr4_1:77201757-77201776 | None:intergenic | 15.0% |
| !!! | GTTAATTGTTTCTTATAATA+AGG | + | chr4_1:77201762-77201781 | Msa0573890:intron | 15.0% |
| !!! | ATTGAAGTTGATAATAGTTT+TGG | + | chr4_1:77196823-77196842 | Msa0573890:CDS | 20.0% |
| !! | AATGTTTATAAAGTCACATA+TGG | + | chr4_1:77197358-77197377 | Msa0573890:CDS | 20.0% |
| !! | TAATGATGTTGAAATGAATT+TGG | + | chr4_1:77197387-77197406 | Msa0573890:CDS | 20.0% |
| !!! | ATTATCCATATGGAATTTTA+AGG | + | chr4_1:77197635-77197654 | Msa0573890:intron | 20.0% |
| !!! | ATTAGCCTATACAATTTTTT+AGG | - | chr4_1:77197724-77197743 | None:intergenic | 20.0% |
| !! | ATAGGCTAATAAAGTAATAA+AGG | + | chr4_1:77197734-77197753 | Msa0573890:intron | 20.0% |
| !! | TAGGCTAATAAAGTAATAAA+GGG | + | chr4_1:77197735-77197754 | Msa0573890:intron | 20.0% |
| !!! | TAAAGGGTTAAATATGTTTT+TGG | + | chr4_1:77197751-77197770 | Msa0573890:intron | 20.0% |
| !!! | GTAGTGATTGAAAATTTTAT+AGG | - | chr4_1:77197839-77197858 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | + | chr4_1:77197842-77197861 | Msa0573890:intron | 20.0% |
| !!! | ATATGATTTTACTTTAAAGG+AGG | + | chr4_1:77198131-77198150 | Msa0573890:intron | 20.0% |
| !!! | TATGATTTTACTTTAAAGGA+GGG | + | chr4_1:77198132-77198151 | Msa0573890:intron | 20.0% |
| !!! | AAATTTTCAATCTTCACTTT+TGG | - | chr4_1:77198159-77198178 | None:intergenic | 20.0% |
| !!! | TGAAGATTGAAAATTTTTTG+AGG | + | chr4_1:77198163-77198182 | Msa0573890:intron | 20.0% |
| !!! | GAAGATTGAAAATTTTTTGA+GGG | + | chr4_1:77198164-77198183 | Msa0573890:intron | 20.0% |
| !!! | AAGTTGAAGAAAATTTTTAG+AGG | + | chr4_1:77198192-77198211 | Msa0573890:intron | 20.0% |
| !!! | AGTTGAAGAAAATTTTTAGA+GGG | + | chr4_1:77198193-77198212 | Msa0573890:intron | 20.0% |
| !! | GAAAAGTTGACATATTTATA+GGG | + | chr4_1:77198224-77198243 | Msa0573890:intron | 20.0% |
| !! | GAATTATTACGTATTGTTAA+TGG | + | chr4_1:77199178-77199197 | Msa0573890:intron | 20.0% |
| !!! | TGCTTTTAATATGTAGTAAT+TGG | - | chr4_1:77199327-77199346 | None:intergenic | 20.0% |
| !! | TAATTATTACGTACTGTTAA+AGG | + | chr4_1:77199636-77199655 | Msa0573890:intron | 20.0% |
| !! | GCAATTAAAAATGTAGTTAA+TGG | + | chr4_1:77199658-77199677 | Msa0573890:intron | 20.0% |
| !!! | TGCTTTTAATAGATAGTAAT+TGG | - | chr4_1:77199785-77199804 | None:intergenic | 20.0% |
| !! | TTAAAAAAATAACACGTGTA+AGG | + | chr4_1:77199821-77199840 | Msa0573890:intron | 20.0% |
| !! | GATATCTAATGTAAAATGTA+CGG | + | chr4_1:77200691-77200710 | Msa0573890:intron | 20.0% |
| !!! | TTTTTTAGGGTGTTTATTTT+CGG | - | chr4_1:77200964-77200983 | None:intergenic | 20.0% |
| !! | AATCAATTATTGACAACATT+TGG | + | chr4_1:77201284-77201303 | Msa0573890:intron | 20.0% |
| !! | TTAAGATTACACTTAATCTT+TGG | + | chr4_1:77201845-77201864 | Msa0573890:intron | 20.0% |
| !! | GAAGAAAAAAATCAAGTATT+TGG | - | chr4_1:77202039-77202058 | None:intergenic | 20.0% |
| !! | TTGTTACATAGAAAATTCAA+CGG | - | chr4_1:77202241-77202260 | None:intergenic | 20.0% |
| !! | AAACTAAGAATCAAATCAAT+AGG | - | chr4_1:77202444-77202463 | None:intergenic | 20.0% |
| !!! | CAACTTTTAGAATAGTAAAT+TGG | + | chr4_1:77203156-77203175 | Msa0573890:CDS | 20.0% |
| !! | TAATGATGTTGAAATGAATT+TGG | + | chr4_1:77197387-77197406 | Msa0573890:CDS | 20.0% |
| ! | GAAATCAAAATTCTCATTGA+AGG | + | chr4_1:77197105-77197124 | Msa0573890:CDS | 25.0% |
| !! | AATGTTTTCTTCAGTAAAGT+CGG | - | chr4_1:77197272-77197291 | None:intergenic | 25.0% |
| !! | CAACTTTTAGCAAAGTAAAT+TGG | + | chr4_1:77197293-77197312 | Msa0573890:CDS | 25.0% |
| ! | GAAATAAGTGGAGATAAATT+TGG | + | chr4_1:77197494-77197513 | Msa0573890:intron | 25.0% |
| ! | TCTAAAGAACGTAATTCTTA+AGG | + | chr4_1:77197550-77197569 | Msa0573890:intron | 25.0% |
| ! | GTATGATGTAATTATCCATA+TGG | + | chr4_1:77197625-77197644 | Msa0573890:intron | 25.0% |
| ! | ATGTACCTTAAAATTCCATA+TGG | - | chr4_1:77197643-77197662 | None:intergenic | 25.0% |
| !!! | CGAAAAGTTGGTATATTTAT+AGG | - | chr4_1:77197779-77197798 | None:intergenic | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | - | chr4_1:77197809-77197828 | None:intergenic | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | - | chr4_1:77197810-77197829 | None:intergenic | 25.0% |
| ! | CGAAAAGTTGACATATTTAT+AGG | + | chr4_1:77198223-77198242 | Msa0573890:intron | 25.0% |
| !! | ACTTGGGTTAAATATGTTTT+TGG | - | chr4_1:77198251-77198270 | None:intergenic | 25.0% |
| !!! | AAAGTATTGGAAAGGAAAAA+TGG | - | chr4_1:77198378-77198397 | None:intergenic | 25.0% |
| !! | AAATCAAAGCTGAAAAGTAT+TGG | - | chr4_1:77198391-77198410 | None:intergenic | 25.0% |
| !! | TCAACAATGCTGAAAAATTT+TGG | - | chr4_1:77198463-77198482 | None:intergenic | 25.0% |
| ! | CATATCATAGTAATAGATGA+TGG | + | chr4_1:77198517-77198536 | Msa0573890:intron | 25.0% |
| !! | TTATAAAAGCTAGATTTGCT+TGG | + | chr4_1:77198587-77198606 | Msa0573890:intron | 25.0% |
| !! | TGCTTTTAATAGGTAGTAAT+TGG | - | chr4_1:77199099-77199118 | None:intergenic | 25.0% |
| !!! | AGGTCATAATTGCTTTTAAT+AGG | - | chr4_1:77199109-77199128 | None:intergenic | 25.0% |
| ! | TCAAATATTAACACGTATCA+AGG | + | chr4_1:77199136-77199155 | Msa0573890:intron | 25.0% |
| ! | GCAATTAAGAATGTAGTTAA+TGG | + | chr4_1:77199200-77199219 | Msa0573890:intron | 25.0% |
| !! | TAAGTCGCATATTTTTCTAT+AGG | + | chr4_1:77199257-77199276 | Msa0573890:intron | 25.0% |
| ! | TCAAAAATTAACACGTATCA+AGG | + | chr4_1:77199365-77199384 | Msa0573890:intron | 25.0% |
| !! | AAAGTCGAATATTTTCGTAT+AGG | + | chr4_1:77199486-77199505 | Msa0573890:intron | 25.0% |
| !! | TGCTTTTAATAGGTAGTAAT+TGG | - | chr4_1:77199099-77199118 | None:intergenic | 25.0% |
| !!! | CGTAGTTAATTGCTTTTAAT+AGG | - | chr4_1:77199337-77199356 | None:intergenic | 25.0% |
| ! | TCAAAAATTAACACGTATCA+AGG | + | chr4_1:77199365-77199384 | Msa0573890:intron | 25.0% |
| !! | AAAGTCGAATATTTTCGTAT+AGG | + | chr4_1:77199486-77199505 | Msa0573890:intron | 25.0% |
| ! | TAATTATGACGTAGTGTTAA+TGG | + | chr4_1:77199863-77199882 | Msa0573890:intron | 25.0% |
| ! | GTGGTATTTAAATAGGTAAT+TGG | - | chr4_1:77199993-77200012 | None:intergenic | 25.0% |
| ! | CAACTAAGTGGTATTTAAAT+AGG | - | chr4_1:77200000-77200019 | None:intergenic | 25.0% |
| ! | CACTACGATAACATATATTA+TGG | + | chr4_1:77200289-77200308 | Msa0573890:intron | 25.0% |
| !!! | ATGTTATTTTTTGTTTAGCG+AGG | + | chr4_1:77200326-77200345 | Msa0573890:intron | 25.0% |
| ! | TGTCATGATAGAATTTAATG+AGG | + | chr4_1:77200433-77200452 | Msa0573890:intron | 25.0% |
| ! | GTCATGATAGAATTTAATGA+GGG | + | chr4_1:77200434-77200453 | Msa0573890:intron | 25.0% |
| ! | TCATGATAGAATTTAATGAG+GGG | + | chr4_1:77200435-77200454 | Msa0573890:intron | 25.0% |
| !! | AGTATTTTCACATTCATCAT+TGG | - | chr4_1:77200628-77200647 | None:intergenic | 25.0% |
| !!! | TTCTTCGTACATATTTTAGT+CGG | + | chr4_1:77200813-77200832 | Msa0573890:intron | 25.0% |
| !!! | TTTTTAGGGTGTTTATTTTC+GGG | - | chr4_1:77200963-77200982 | None:intergenic | 25.0% |
| !!! | GGTTTTTTTTTTCTTCTTTC+GGG | - | chr4_1:77201104-77201123 | None:intergenic | 25.0% |
| !!! | GGGTTTTTTTTTTCTTCTTT+CGG | - | chr4_1:77201105-77201124 | None:intergenic | 25.0% |
| !!! | TTTGACTAAAGTTTGGTTTT+GGG | - | chr4_1:77201252-77201271 | None:intergenic | 25.0% |
| !!! | TTTTGACTAAAGTTTGGTTT+TGG | - | chr4_1:77201253-77201272 | None:intergenic | 25.0% |
| !! | TTGTTTCTTATAATAAGGAG+CGG | + | chr4_1:77201767-77201786 | Msa0573890:intron | 25.0% |
| !!! | AAAAAAGTAACCGCTATTTT+TGG | + | chr4_1:77201987-77202006 | Msa0573890:intron | 25.0% |
| !!! | AAAAAGTAACCGCTATTTTT+GGG | + | chr4_1:77201988-77202007 | Msa0573890:intron | 25.0% |
| ! | GAAAATTCAACGGTAAAATA+AGG | - | chr4_1:77202231-77202250 | None:intergenic | 25.0% |
| ! | AAATCAATAGGCAAATATGT+TGG | - | chr4_1:77202432-77202451 | None:intergenic | 25.0% |
| !! | AAAGAAAGACTTTTCTTTCA+TGG | - | chr4_1:77202493-77202512 | None:intergenic | 25.0% |
| ! | CATTAGTGTATATAGTTAGT+TGG | + | chr4_1:77202562-77202581 | Msa0573890:intron | 25.0% |
| ! | AAGACAGAAACAAAGAAATT+TGG | + | chr4_1:77202828-77202847 | Msa0573890:CDS | 25.0% |
| !! | AAAGAAAAAGAAGTACAACT+TGG | + | chr4_1:77202996-77203015 | Msa0573890:CDS | 25.0% |
| ! | TACTATTACACCATTATTTG+CGG | - | chr4_1:77203069-77203088 | None:intergenic | 25.0% |
| ! | GAAATGGAGTATGAATCTTT+TGG | + | chr4_1:77196761-77196780 | Msa0573890:exon | 30.0% |
| ! | TGTTTTATGCTAGATCCTTT+TGG | - | chr4_1:77196800-77196819 | None:intergenic | 30.0% |
| AAAAGGATCTAGCATAAAAC+AGG | + | chr4_1:77196799-77196818 | Msa0573890:CDS | 30.0% | |
| CACACAGAAACAAAAAACTA+TGG | + | chr4_1:77196878-77196897 | Msa0573890:CDS | 30.0% | |
| !!! | CTAATTTTTTTGGACGGAAA+GGG | + | chr4_1:77196933-77196952 | Msa0573890:intron | 30.0% |
| AAGAGTGATGACAAAGAAAA+AGG | + | chr4_1:77197034-77197053 | Msa0573890:CDS | 30.0% | |
| AAGAAAAAGGAGTAAAACTC+AGG | + | chr4_1:77197047-77197066 | Msa0573890:CDS | 30.0% | |
| AGAAAAAGGAGTAAAACTCA+GGG | + | chr4_1:77197048-77197067 | Msa0573890:CDS | 30.0% | |
| AAAATTCTCATTGAAGGAGA+AGG | + | chr4_1:77197111-77197130 | Msa0573890:CDS | 30.0% | |
| CAAAGCTTTCATGATGAAAA+TGG | + | chr4_1:77197238-77197257 | Msa0573890:CDS | 30.0% | |
| ! | ATGTTTTCTTCAGTAAAGTC+GGG | - | chr4_1:77197271-77197290 | None:intergenic | 30.0% |
| TGATGTTGAAATGAATTTGG+AGG | + | chr4_1:77197390-77197409 | Msa0573890:CDS | 30.0% | |
| GATGTTGAAATGAATTTGGA+GGG | + | chr4_1:77197391-77197410 | Msa0573890:CDS | 30.0% | |
| TCCTGGATTAATTTCTTCAT+CGG | - | chr4_1:77197437-77197456 | None:intergenic | 30.0% | |
| ACTACTCATGTTTATACTTC+AGG | + | chr4_1:77197460-77197479 | Msa0573890:intron | 30.0% | |
| GTTTGCAATCAAGAAATAAG+TGG | + | chr4_1:77197482-77197501 | Msa0573890:intron | 30.0% | |
| AAAGAACGTAATTCTTAAGG+AGG | + | chr4_1:77197553-77197572 | Msa0573890:intron | 30.0% | |
| AAAAGACATTCTCTAATCCT+AGG | - | chr4_1:77197586-77197605 | None:intergenic | 30.0% | |
| ATTTGCAGCTTTCTTTGTAT+CGG | + | chr4_1:77197697-77197716 | Msa0573890:intron | 30.0% | |
| TTATAGGGACTAAAAGTTGA+AGG | - | chr4_1:77197823-77197842 | None:intergenic | 30.0% | |
| !! | AAAGCTGAAAAGTATTGGAA+AGG | - | chr4_1:77198386-77198405 | None:intergenic | 30.0% |
| TTACTATGATATGCAAACAC+TGG | - | chr4_1:77198510-77198529 | None:intergenic | 30.0% | |
| GTATTAAAGCCTAATCAAGT+CGG | + | chr4_1:77198777-77198796 | Msa0573890:intron | 30.0% | |
| CTGATTAGCAATTAGTGTAT+GGG | - | chr4_1:77198811-77198830 | None:intergenic | 30.0% | |
| TCTGATTAGCAATTAGTGTA+TGG | - | chr4_1:77198812-77198831 | None:intergenic | 30.0% | |
| TCTGATTAGCAATTAGTGTA+GGG | - | chr4_1:77198812-77198831 | None:intergenic | 30.0% | |
| TTCTGATTAGCAATTAGTGT+AGG | - | chr4_1:77198813-77198832 | None:intergenic | 30.0% | |
| TATAAACATCCCTTAGAAAG+CGG | + | chr4_1:77198872-77198891 | Msa0573890:intron | 30.0% | |
| TGTCAGTAGAATAATGTGAT+AGG | - | chr4_1:77198952-77198971 | None:intergenic | 30.0% | |
| ATCTTCCTATCACTCTATAT+CGG | - | chr4_1:77199015-77199034 | None:intergenic | 30.0% | |
| ATAGGAAGATATGTGTTTCA+AGG | + | chr4_1:77199025-77199044 | Msa0573890:intron | 30.0% | |
| ACTTTAGTGGTAAAATTCGA+GGG | - | chr4_1:77199059-77199078 | None:intergenic | 30.0% | |
| TACTTTAGTGGTAAAATTCG+AGG | - | chr4_1:77199060-77199079 | None:intergenic | 30.0% | |
| GCAATTAAGAACGTAGTTAA+TGG | + | chr4_1:77199429-77199448 | Msa0573890:intron | 30.0% | |
| ATAGATAGTAATTGGTAGAG+TGG | - | chr4_1:77199777-77199796 | None:intergenic | 30.0% | |
| ! | ATTTTGCTTAAAGTCGAGAA+TGG | - | chr4_1:77200034-77200053 | None:intergenic | 30.0% |
| CATCTTCATGAACATGATAT+TGG | + | chr4_1:77200204-77200223 | Msa0573890:intron | 30.0% | |
| !!! | TATTTTTTGTTTAGCGAGGA+CGG | + | chr4_1:77200330-77200349 | Msa0573890:intron | 30.0% |
| ATTCAAGGAATGATTGAAGA+AGG | + | chr4_1:77200389-77200408 | Msa0573890:intron | 30.0% | |
| ATATTAAGTTTGTGCTTGTG+TGG | - | chr4_1:77200476-77200495 | None:intergenic | 30.0% | |
| ACACAAGCACAAACTTAATA+TGG | + | chr4_1:77200475-77200494 | Msa0573890:intron | 30.0% | |
| GCACAAACTTAATATGGAAT+TGG | + | chr4_1:77200481-77200500 | Msa0573890:intron | 30.0% | |
| ! | ACAAGAGTTACTTTAAGAGA+TGG | + | chr4_1:77200568-77200587 | Msa0573890:intron | 30.0% |
| ! | CAAGAGTTACTTTAAGAGAT+GGG | + | chr4_1:77200569-77200588 | Msa0573890:intron | 30.0% |
| AAACTGAGCATACAAACAAA+AGG | + | chr4_1:77200917-77200936 | Msa0573890:intron | 30.0% | |
| ! | TTCGTGAATAAGTCTGTTTT+AGG | - | chr4_1:77201032-77201051 | None:intergenic | 30.0% |
| !! | ATTGGGAGTTTAATTTTCAG+GGG | - | chr4_1:77201125-77201144 | None:intergenic | 30.0% |
| !! | GATTGGGAGTTTAATTTTCA+GGG | - | chr4_1:77201126-77201145 | None:intergenic | 30.0% |
| ! | TCTTTCAGATATGAGCTTTT+CGG | - | chr4_1:77201173-77201192 | None:intergenic | 30.0% |
| GTCAATAATTGATTGAGAGT+CGG | - | chr4_1:77201278-77201297 | None:intergenic | 30.0% | |
| AACAAGAATTGGACAACATT+TGG | + | chr4_1:77201357-77201376 | Msa0573890:intron | 30.0% | |
| TAATGAAATTACCCTCATCA+GGG | - | chr4_1:77201542-77201561 | None:intergenic | 30.0% | |
| !! | TATGTCATGTGTTGCTTAAT+GGG | - | chr4_1:77201633-77201652 | None:intergenic | 30.0% |
| !! | TTATGTCATGTGTTGCTTAA+TGG | - | chr4_1:77201634-77201653 | None:intergenic | 30.0% |
| TGAAGTCAATAAGGGTAAAT+TGG | - | chr4_1:77201925-77201944 | None:intergenic | 30.0% | |
| CATGCAAATGAAGTCAATAA+GGG | - | chr4_1:77201933-77201952 | None:intergenic | 30.0% | |
| TCATGCAAATGAAGTCAATA+AGG | - | chr4_1:77201934-77201953 | None:intergenic | 30.0% | |
| ATTTGCATGATGACTCTTAA+AGG | + | chr4_1:77201944-77201963 | Msa0573890:intron | 30.0% | |
| TTTGCATGATGACTCTTAAA+GGG | + | chr4_1:77201945-77201964 | Msa0573890:intron | 30.0% | |
| GTTGAAATTCCCAAAAATAG+CGG | - | chr4_1:77202000-77202019 | None:intergenic | 30.0% | |
| ! | AGTATTTGGAAAGTACAAGA+GGG | - | chr4_1:77202025-77202044 | None:intergenic | 30.0% |
| ! | AAGTATTTGGAAAGTACAAG+AGG | - | chr4_1:77202026-77202045 | None:intergenic | 30.0% |
| !!! | TTTGGTTTTTCACTCTTTTG+TGG | - | chr4_1:77202092-77202111 | None:intergenic | 30.0% |
| ! | TATTCTCTCTTGTTTGTGTT+TGG | - | chr4_1:77202110-77202129 | None:intergenic | 30.0% |
| !!! | CCTTTGTTTTGTTTTCTCAA+CGG | - | chr4_1:77202176-77202195 | None:intergenic | 30.0% |
| GATAGATAGTTAAGAGTTGT+TGG | + | chr4_1:77202382-77202401 | Msa0573890:intron | 30.0% | |
| !! | AGTAGCTTAACTTGTTGATT+TGG | - | chr4_1:77202632-77202651 | None:intergenic | 30.0% |
| TAGATCAGATAAACATTCAG+AGG | - | chr4_1:77202671-77202690 | None:intergenic | 30.0% | |
| GTTGAATTAATGCAGAAGAA+TGG | + | chr4_1:77202699-77202718 | Msa0573890:intron | 30.0% | |
| !!! | ATTGAAGATGATGCTACTTT+TGG | + | chr4_1:77202773-77202792 | Msa0573890:CDS | 30.0% |
| ! | CTTGATTTGATATAACAACC+AGG | - | chr4_1:77202808-77202827 | None:intergenic | 30.0% |
| ATAAATTGTTTGGACGGAAA+GGG | + | chr4_1:77202883-77202902 | Msa0573890:CDS | 30.0% | |
| AAACAAGATGCAGAAAAATG+AGG | + | chr4_1:77203034-77203053 | Msa0573890:CDS | 30.0% | |
| TGGTGTAATAGTAATAGATG+AGG | + | chr4_1:77203076-77203095 | Msa0573890:CDS | 30.0% | |
| ! | CATTTTCATCATGAAAGCTT+TGG | - | chr4_1:77197240-77197259 | None:intergenic | 30.0% |
| CAAAGCTTTCATGATGAAAA+TGG | + | chr4_1:77197238-77197257 | Msa0573890:CDS | 30.0% | |
| AGTATTTATGAAGTCACGTA+TGG | + | chr4_1:77203191-77203210 | Msa0573890:CDS | 30.0% | |
| GATGTTGAAATGAATTTGGA+AGG | + | chr4_1:77197391-77197410 | Msa0573890:CDS | 30.0% | |
| GTAGACGAAGAAATTAATAC+AGG | + | chr4_1:77203266-77203285 | Msa0573890:CDS | 30.0% | |
| ! | TGGAGTATGAATCTTTTGGA+AGG | + | chr4_1:77196765-77196784 | Msa0573890:CDS | 35.0% |
| !!! | TGCTAGATCCTTTTGGTTTT+TGG | - | chr4_1:77196793-77196812 | None:intergenic | 35.0% |
| !!! | TAGTTTTGGCTATTTGTGTC+TGG | + | chr4_1:77196837-77196856 | Msa0573890:CDS | 35.0% |
| !!! | GGAAGTGGAGCTAATTTTTT+TGG | + | chr4_1:77196923-77196942 | Msa0573890:intron | 35.0% |
| !!! | GTGGAGCTAATTTTTTTGGA+CGG | + | chr4_1:77196927-77196946 | Msa0573890:intron | 35.0% |
| !!! | GCTAATTTTTTTGGACGGAA+AGG | + | chr4_1:77196932-77196951 | Msa0573890:intron | 35.0% |
| ! | ATCGGATGAAAGAGCTTTTT+CGG | + | chr4_1:77196967-77196986 | Msa0573890:intron | 35.0% |
| CTGCAAAATGATATGCATGT+TGG | + | chr4_1:77197073-77197092 | Msa0573890:CDS | 35.0% | |
| AGAAACCGGAATTAAAGAGA+AGG | + | chr4_1:77197147-77197166 | Msa0573890:CDS | 35.0% | |
| GAAACCGGAATTAAAGAGAA+GGG | + | chr4_1:77197148-77197167 | Msa0573890:CDS | 35.0% | |
| GTTTCCCTTCTCTTTAATTC+CGG | - | chr4_1:77197155-77197174 | None:intergenic | 35.0% | |
| CAACAAGATGCAGAAAAATG+TGG | + | chr4_1:77197174-77197193 | Msa0573890:CDS | 35.0% | |
| TAAACATGAGTAGTACTTCC+TGG | - | chr4_1:77197454-77197473 | None:intergenic | 35.0% | |
| CGTAATTCTTAAGGAGGTTT+AGG | + | chr4_1:77197559-77197578 | Msa0573890:intron | 35.0% | |
| TTTGCAGCTTTCTTTGTATC+GGG | + | chr4_1:77197698-77197717 | Msa0573890:intron | 35.0% | |
| TCGGGCCTAAAAAATTGTAT+AGG | + | chr4_1:77197716-77197735 | Msa0573890:intron | 35.0% | |
| GGAAAAAAGCTAGGGAATTA+GGG | - | chr4_1:77198645-77198664 | None:intergenic | 35.0% | |
| TTTAGGAGGGAAAAAAGCTA+GGG | - | chr4_1:77198653-77198672 | None:intergenic | 35.0% | |
| CAAGTAGTACATGTTTAGGA+GGG | - | chr4_1:77198666-77198685 | None:intergenic | 35.0% | |
| CTGATTAGCAATTAGTGTAG+GGG | - | chr4_1:77198846-77198865 | None:intergenic | 35.0% | |
| !! | TTTCAATTGCCGCTTTCTAA+GGG | - | chr4_1:77198884-77198903 | None:intergenic | 35.0% |
| !!! | TTTTCAATTGCCGCTTTCTA+AGG | - | chr4_1:77198885-77198904 | None:intergenic | 35.0% |
| GTGATTAGTGCATACTTTAG+TGG | - | chr4_1:77199072-77199091 | None:intergenic | 35.0% | |
| GTAGTAATTGGTAGAGTGAT+TGG | - | chr4_1:77199087-77199106 | None:intergenic | 35.0% | |
| GTAGTAATTGGTAGAGTGAT+TGG | - | chr4_1:77199087-77199106 | None:intergenic | 35.0% | |
| GATGTATTAGCACAACTAAG+TGG | - | chr4_1:77200012-77200031 | None:intergenic | 35.0% | |
| ! | CTTTCTTGCACTTGCTAATA+TGG | + | chr4_1:77200069-77200088 | Msa0573890:intron | 35.0% |
| ! | TTTGAAGTTGATTGTCTGTG+TGG | + | chr4_1:77200138-77200157 | Msa0573890:intron | 35.0% |
| TTCATGAAGATGATATCGTC+TGG | - | chr4_1:77200196-77200215 | None:intergenic | 35.0% | |
| !! | CATGATATTGGTTGATGAGA+AGG | + | chr4_1:77200216-77200235 | Msa0573890:intron | 35.0% |
| CGTAGTGACAACTTGAAAAA+AGG | - | chr4_1:77200276-77200295 | None:intergenic | 35.0% | |
| TCAATCATTCCTTGAATCGT+TGG | - | chr4_1:77200386-77200405 | None:intergenic | 35.0% | |
| CTTAATATGGAATTGGCGTA+AGG | + | chr4_1:77200488-77200507 | Msa0573890:intron | 35.0% | |
| AGGTTTGGATCAAGTTTCAA+AGG | + | chr4_1:77200508-77200527 | Msa0573890:intron | 35.0% | |
| !!! | TTCGTACATATTTTAGTCGG+TGG | + | chr4_1:77200816-77200835 | Msa0573890:intron | 35.0% |
| !!! | TCGTACATATTTTAGTCGGT+GGG | + | chr4_1:77200817-77200836 | Msa0573890:intron | 35.0% |
| !! | GTGAATAAGTCTGTTTTAGG+TGG | - | chr4_1:77201029-77201048 | None:intergenic | 35.0% |
| !! | GTTGGATTTCGTTTTTACAG+TGG | - | chr4_1:77201060-77201079 | None:intergenic | 35.0% |
| !! | GGATTGGGAGTTTAATTTTC+AGG | - | chr4_1:77201127-77201146 | None:intergenic | 35.0% |
| ! | CTTTTTATGGTTTCTCTCAG+TGG | - | chr4_1:77201229-77201248 | None:intergenic | 35.0% |
| !!! | GTTTGGTTTTGGGCTTTTTA+TGG | - | chr4_1:77201242-77201261 | None:intergenic | 35.0% |
| !!! | TCGGTGTTTTGACTAAAGTT+TGG | - | chr4_1:77201259-77201278 | None:intergenic | 35.0% |
| GACAACATTTGGTAGAGATA+TGG | + | chr4_1:77201295-77201314 | Msa0573890:intron | 35.0% | |
| GACAACATTTGGTAGAGATA+TGG | + | chr4_1:77201295-77201314 | Msa0573890:intron | 35.0% | |
| CATTAAATCAGCTCCATATC+AGG | - | chr4_1:77201517-77201536 | None:intergenic | 35.0% | |
| CTAATGAAATTACCCTCATC+AGG | - | chr4_1:77201543-77201562 | None:intergenic | 35.0% | |
| TTCATTAGTTCACGTGTCTA+AGG | + | chr4_1:77201555-77201574 | Msa0573890:intron | 35.0% | |
| TTTCTTATAATAAGGAGCGG+AGG | + | chr4_1:77201770-77201789 | Msa0573890:intron | 35.0% | |
| TTCTTATAATAAGGAGCGGA+GGG | + | chr4_1:77201771-77201790 | Msa0573890:intron | 35.0% | |
| AATACTGAACACCAAGAACA+AGG | + | chr4_1:77202126-77202145 | Msa0573890:intron | 35.0% | |
| TTTCTTGTCTTCCTTGTTCT+TGG | - | chr4_1:77202140-77202159 | None:intergenic | 35.0% | |
| CCGTTGAGAAAACAAAACAA+AGG | + | chr4_1:77202173-77202192 | Msa0573890:intron | 35.0% | |
| CATGATGATTGATGGGAAAT+TGG | - | chr4_1:77202318-77202337 | None:intergenic | 35.0% | |
| CAATTTCCCATCAATCATCA+TGG | + | chr4_1:77202316-77202335 | Msa0573890:intron | 35.0% | |
| TTGTAGCCATGATGATTGAT+GGG | - | chr4_1:77202325-77202344 | None:intergenic | 35.0% | |
| ATTGTAGCCATGATGATTGA+TGG | - | chr4_1:77202326-77202345 | None:intergenic | 35.0% | |
| GAGTTGTTGGAAATCATACT+TGG | + | chr4_1:77202395-77202414 | Msa0573890:intron | 35.0% | |
| ! | AGTCTTTCTTTTCCTACGTT+TGG | + | chr4_1:77202502-77202521 | Msa0573890:intron | 35.0% |
| ! | GTCTTTCTTTTCCTACGTTT+GGG | + | chr4_1:77202503-77202522 | Msa0573890:intron | 35.0% |
| ! | TTTTGCATTTGCAACAAGAG+AGG | - | chr4_1:77202598-77202617 | None:intergenic | 35.0% |
| ! | AGAATGGAGTATCAATCTCT+TGG | + | chr4_1:77202715-77202734 | Msa0573890:CDS | 35.0% |
| TCTTGGAACCAAAAACCAAA+AGG | + | chr4_1:77202732-77202751 | Msa0573890:CDS | 35.0% | |
| CTTGGAACCAAAAACCAAAA+GGG | + | chr4_1:77202733-77202752 | Msa0573890:CDS | 35.0% | |
| ! | TGTTTTACGTTAGACCCTTT+TGG | - | chr4_1:77202750-77202769 | None:intergenic | 35.0% |
| AAAAGGGTCTAACGTAAAAC+AGG | + | chr4_1:77202749-77202768 | Msa0573890:CDS | 35.0% | |
| !! | ATTCAAATCAAGCTTGTTGC+TGG | + | chr4_1:77202852-77202871 | Msa0573890:CDS | 35.0% |
| GGATGTGGACATAAATTGTT+TGG | + | chr4_1:77202873-77202892 | Msa0573890:CDS | 35.0% | |
| GTGGACATAAATTGTTTGGA+CGG | + | chr4_1:77202877-77202896 | Msa0573890:CDS | 35.0% | |
| CATAAATTGTTTGGACGGAA+AGG | + | chr4_1:77202882-77202901 | Msa0573890:CDS | 35.0% | |
| ACTGTTCATGTTGATACTTC+AGG | + | chr4_1:77203293-77203312 | Msa0573890:CDS | 35.0% | |
| CAGGTTTGCAATCAAGAAAT+AGG | + | chr4_1:77197479-77197498 | Msa0573890:intron | 35.0% | |
| GTTTGCAATCAAGAAATAGG+TGG | + | chr4_1:77203315-77203334 | Msa0573890:CDS | 35.0% | |
| !! | GGAAGGTACCAAAAACCAAA+AGG | + | chr4_1:77196782-77196801 | Msa0573890:CDS | 40.0% |
| TCAGGAAAGGTAGATTCTGT+TGG | + | chr4_1:77196992-77197011 | Msa0573890:intron | 40.0% | |
| GACAAGGATGTTGAAGAAAC+CGG | + | chr4_1:77197133-77197152 | Msa0573890:CDS | 40.0% | |
| CAAGATGCAGAAAAATGTGG+TGG | + | chr4_1:77197177-77197196 | Msa0573890:intron | 40.0% | |
| ! | TTTTCTTCAGTAAAGTCGGG+CGG | - | chr4_1:77197268-77197287 | None:intergenic | 40.0% |
| GCCGATGAAGAAATTAATCC+AGG | + | chr4_1:77197433-77197452 | Msa0573890:CDS | 40.0% | |
| GAGGGACTAAAACGAAAAGT+TGG | - | chr4_1:77198211-77198230 | None:intergenic | 40.0% | |
| ! | CTAGTGCATTGATATCAGTC+AGG | - | chr4_1:77198339-77198358 | None:intergenic | 40.0% |
| TAGGGAATTAGGGCAAAGTA+GGG | - | chr4_1:77198635-77198654 | None:intergenic | 40.0% | |
| GGGAAAAAAGCTAGGGAATT+AGG | - | chr4_1:77198646-77198665 | None:intergenic | 40.0% | |
| GTTTAGGAGGGAAAAAAGCT+AGG | - | chr4_1:77198654-77198673 | None:intergenic | 40.0% | |
| GCAAGTAGTACATGTTTAGG+AGG | - | chr4_1:77198667-77198686 | None:intergenic | 40.0% | |
| CGAGCAAGTAGTACATGTTT+AGG | - | chr4_1:77198670-77198689 | None:intergenic | 40.0% | |
| GATGTGATCAAGTGCTTGAA+CGG | - | chr4_1:77198704-77198723 | None:intergenic | 40.0% | |
| !! | GAATGTTGACCGACTTGATT+AGG | - | chr4_1:77198789-77198808 | None:intergenic | 40.0% |
| GCTATCCGATATAGAGTGAT+AGG | + | chr4_1:77199007-77199026 | Msa0573890:intron | 40.0% | |
| ATCACGGATCAGCCATATAT+GGG | - | chr4_1:77200164-77200183 | None:intergenic | 40.0% | |
| TATCACGGATCAGCCATATA+TGG | - | chr4_1:77200165-77200184 | None:intergenic | 40.0% | |
| TATATGGCTGATCCGTGATA+AGG | + | chr4_1:77200165-77200184 | Msa0573890:intron | 40.0% | |
| ! | CGTCTGGATTTTCCTTATCA+CGG | - | chr4_1:77200180-77200199 | None:intergenic | 40.0% |
| CAAGGAATGATTGAAGAAGG+AGG | + | chr4_1:77200392-77200411 | Msa0573890:intron | 40.0% | |
| TATGGAATTGGCGTAAGGTT+TGG | + | chr4_1:77200493-77200512 | Msa0573890:intron | 40.0% | |
| !! | CAAAAGGCGTCGTATATAGA+CGG | + | chr4_1:77200933-77200952 | Msa0573890:intron | 40.0% |
| !!! | AGGGGTGTTGGTGTTTTTTA+GGG | - | chr4_1:77200977-77200996 | None:intergenic | 40.0% |
| !! | TTAGGTGGTGACGTGAATTT+TGG | - | chr4_1:77201014-77201033 | None:intergenic | 40.0% |
| ! | TTCAGATATGAGCTTTTCGG+AGG | - | chr4_1:77201170-77201189 | None:intergenic | 40.0% |
| TATGGTTTCTCTCAGTGGAT+CGG | - | chr4_1:77201224-77201243 | None:intergenic | 40.0% | |
| GAATTGAGCAAAGCCTGATA+TGG | + | chr4_1:77201501-77201520 | Msa0573890:intron | 40.0% | |
| TGATTTAATGCTCCCTGATG+AGG | + | chr4_1:77201527-77201546 | Msa0573890:intron | 40.0% | |
| GATTTAATGCTCCCTGATGA+GGG | + | chr4_1:77201528-77201547 | Msa0573890:intron | 40.0% | |
| ! | TAGTTCACGTGTCTAAGGTT+AGG | + | chr4_1:77201560-77201579 | Msa0573890:intron | 40.0% |
| ! | TGTTTTCTCAACGGAGAAAG+TGG | - | chr4_1:77202167-77202186 | None:intergenic | 40.0% |
| AAGTCAAACAACCCAAACGT+AGG | - | chr4_1:77202517-77202536 | None:intergenic | 40.0% | |
| !!! | CGTTAGACCCTTTTGGTTTT+TGG | - | chr4_1:77202743-77202762 | None:intergenic | 40.0% |
| TCAGGAAAAGCTCTTTCATC+GGG | - | chr4_1:77202921-77202940 | None:intergenic | 40.0% | |
| GTCAGGAAAAGCTCTTTCAT+CGG | - | chr4_1:77202922-77202941 | None:intergenic | 40.0% | |
| TCAGGAAAGGTAGATTCTGT+TGG | + | chr4_1:77196992-77197011 | Msa0573890:intron | 40.0% | |
| ACAACTTGGAGTTGAAGAGA+AGG | + | chr4_1:77203010-77203029 | Msa0573890:CDS | 40.0% | |
| CAACTTGGAGTTGAAGAGAA+GGG | + | chr4_1:77203011-77203030 | Msa0573890:CDS | 40.0% | |
| CAAGATGCAGAAAAATGAGG+TGG | + | chr4_1:77203037-77203056 | Msa0573890:CDS | 40.0% | |
| !! | AGTCCAACCAAGCTTGTTGT+AGG | + | chr4_1:77196902-77196921 | Msa0573890:intron | 45.0% |
| CTTCCTACAACAAGCTTGGT+TGG | - | chr4_1:77196908-77196927 | None:intergenic | 45.0% | |
| !! | ACCAAGCTTGTTGTAGGAAG+TGG | + | chr4_1:77196908-77196927 | Msa0573890:intron | 45.0% |
| TCCACTTCCTACAACAAGCT+TGG | - | chr4_1:77196912-77196931 | None:intergenic | 45.0% | |
| GAAAGGGATAATGTCGCGAT+CGG | + | chr4_1:77196949-77196968 | Msa0573890:intron | 45.0% | |
| !!! | GAAAGAGCTTTTTCGGACTC+AGG | + | chr4_1:77196974-77196993 | Msa0573890:intron | 45.0% |
| !!! | AGCTTTTTCGGACTCAGGAA+AGG | + | chr4_1:77196979-77196998 | Msa0573890:intron | 45.0% |
| CTCATTGAAGGAGAAGGACA+AGG | + | chr4_1:77197117-77197136 | Msa0573890:CDS | 45.0% | |
| ! | CAGAAAAATGTGGTGGAGAG+TGG | + | chr4_1:77197184-77197203 | Msa0573890:intron | 45.0% |
| ! | TGATGACGAGGAAACAAGTG+AGG | + | chr4_1:77197213-77197232 | Msa0573890:intron | 45.0% |
| ! | CTTAAGGAGGTTTAGGACCT+AGG | + | chr4_1:77197566-77197585 | Msa0573890:intron | 45.0% |
| CTAGGGAATTAGGGCAAAGT+AGG | - | chr4_1:77198636-77198655 | None:intergenic | 45.0% | |
| AGCTGTGACAGGTGGAAAAA+AGG | + | chr4_1:77200114-77200133 | Msa0573890:intron | 45.0% | |
| TTGTCTGTGTGGCCCATATA+TGG | + | chr4_1:77200149-77200168 | Msa0573890:intron | 45.0% | |
| TGGCACCAGGAACTTATGAA+CGG | - | chr4_1:77200366-77200385 | None:intergenic | 45.0% | |
| TGCTCAAGACGAACAGAGAT+CGG | + | chr4_1:77200892-77200911 | Msa0573890:intron | 45.0% | |
| !!! | CAGGGGTGTTGGTGTTTTTT+AGG | - | chr4_1:77200978-77200997 | None:intergenic | 45.0% |
| AAAAAACACCAACACCCCTG+AGG | + | chr4_1:77200978-77200997 | Msa0573890:intron | 45.0% | |
| !! | GTGGTGACGTGAATTTTGGT+GGG | - | chr4_1:77201010-77201029 | None:intergenic | 45.0% |
| !! | CGACTTTGGTGTTCAGGATT+GGG | - | chr4_1:77201142-77201161 | None:intergenic | 45.0% |
| !! | TCGACTTTGGTGTTCAGGAT+TGG | - | chr4_1:77201143-77201162 | None:intergenic | 45.0% |
| !! | TACTTTTGGCTGTTTGTGCC+TGG | + | chr4_1:77202787-77202806 | Msa0573890:CDS | 45.0% |
| !! | ATCAAGCTTGTTGCTGGATG+TGG | + | chr4_1:77202858-77202877 | Msa0573890:CDS | 45.0% |
| ! | GAAAGAGCTTTTCCTGACTC+AGG | + | chr4_1:77202924-77202943 | Msa0573890:CDS | 45.0% |
| ! | AGCTTTTCCTGACTCAGGAA+AGG | + | chr4_1:77202929-77202948 | Msa0573890:CDS | 45.0% |
| GAATCTACCTTTCCTGAGTC+AGG | - | chr4_1:77196989-77197008 | None:intergenic | 45.0% | |
| !! | ACAAAAATTAAATTAAAAAA+GGG | - | chr4_1:77197869-77197888 | None:intergenic | 5.0% |
| !! | TACAAAAATTAAATTAAAAA+AGG | - | chr4_1:77197870-77197889 | None:intergenic | 5.0% |
| !!! | AAAAATTCTAATTTTTTTTT+GGG | - | chr4_1:77197942-77197961 | None:intergenic | 5.0% |
| AGGGCAAAGTAGGGAGGATT+AGG | - | chr4_1:77198626-77198645 | None:intergenic | 50.0% | |
| GGAATTAGGGCAAAGTAGGG+AGG | - | chr4_1:77198632-77198651 | None:intergenic | 50.0% | |
| ACCTGTCACAGCTGAAATGG+GGG | - | chr4_1:77200107-77200126 | None:intergenic | 50.0% | |
| CACCTGTCACAGCTGAAATG+GGG | - | chr4_1:77200108-77200127 | None:intergenic | 50.0% | |
| CCACCTGTCACAGCTGAAAT+GGG | - | chr4_1:77200109-77200128 | None:intergenic | 50.0% | |
| TCCACCTGTCACAGCTGAAA+TGG | - | chr4_1:77200110-77200129 | None:intergenic | 50.0% | |
| GGAACTTATGAACGGTGGCA+TGG | - | chr4_1:77200358-77200377 | None:intergenic | 50.0% | |
| TGCCACCGTTCATAAGTTCC+TGG | + | chr4_1:77200358-77200377 | Msa0573890:intron | 50.0% | |
| CACCAGGAACTTATGAACGG+TGG | - | chr4_1:77200363-77200382 | None:intergenic | 50.0% | |
| ! | TTCCTGGTGCCAACGATTCA+AGG | + | chr4_1:77200374-77200393 | Msa0573890:intron | 50.0% |
| TTCCTTGAATCGTTGGCACC+AGG | - | chr4_1:77200379-77200398 | None:intergenic | 50.0% | |
| ! | TTTGGTGGGTGTTGTCCTCA+GGG | - | chr4_1:77200996-77201015 | None:intergenic | 50.0% |
| !! | TTTTGGTGGGTGTTGTCCTC+AGG | - | chr4_1:77200997-77201016 | None:intergenic | 50.0% |
| !! | GGTGGTGACGTGAATTTTGG+TGG | - | chr4_1:77201011-77201030 | None:intergenic | 50.0% |
| TTCGGGTGAGTAGTGACGAT+GGG | - | chr4_1:77201087-77201106 | None:intergenic | 50.0% | |
| ! | TTTCGGGTGAGTAGTGACGA+TGG | - | chr4_1:77201088-77201107 | None:intergenic | 50.0% |
| !! | GTGACTCGACTTTGGTGTTC+AGG | - | chr4_1:77201148-77201167 | None:intergenic | 50.0% |
| TTTCGGAGGTGACTCGACTT+TGG | - | chr4_1:77201156-77201175 | None:intergenic | 50.0% | |
| !! | GAGCGGAGGGAGTATTATAG+AGG | + | chr4_1:77201784-77201803 | Msa0573890:intron | 50.0% |
| !! | GTGGAGAGTGCCGCAAATAA+TGG | + | chr4_1:77203056-77203075 | Msa0573890:CDS | 50.0% |
| GAAAATGGTGTTCCGCCTGA+CGG | + | chr4_1:77203116-77203135 | Msa0573890:CDS | 50.0% | |
| ! | ATGTTTTCTTCACCGCCGTC+AGG | - | chr4_1:77203134-77203153 | None:intergenic | 50.0% |
| ! | GAGTGGCGCAAATGATGACG+AGG | + | chr4_1:77197201-77197220 | Msa0573890:intron | 55.0% |
| ACCCCCATTTCAGCTGTGAC+AGG | + | chr4_1:77200103-77200122 | Msa0573890:intron | 55.0% | |
| CCCATTTCAGCTGTGACAGG+TGG | + | chr4_1:77200106-77200125 | Msa0573890:intron | 55.0% | |
| ! | TTGGTGGGTGTTGTCCTCAG+GGG | - | chr4_1:77200995-77201014 | None:intergenic | 55.0% |
| TCAGTGGATCGGAGGTCGAT+AGG | - | chr4_1:77201213-77201232 | None:intergenic | 55.0% | |
| GGTTTCTCTCAGTGGATCGG+AGG | - | chr4_1:77201221-77201240 | None:intergenic | 55.0% | |
| ! | AAACTTCCCCCAAGCGTCGT+GGG | + | chr4_1:77201868-77201887 | Msa0573890:intron | 55.0% |
| ! | TTTTCTTCACCGCCGTCAGG+CGG | - | chr4_1:77203131-77203150 | None:intergenic | 55.0% |
| TTTAGTCGGTGGGACCCGTG+CGG | + | chr4_1:77200827-77200846 | Msa0573890:intron | 60.0% | |
| ! | GGTGTTGTCCTCAGGGGTGT+TGG | - | chr4_1:77200989-77201008 | None:intergenic | 60.0% |
| GTAGTGACGATGGGCGGTGT+TGG | - | chr4_1:77201078-77201097 | None:intergenic | 60.0% | |
| GGGTGAGTAGTGACGATGGG+CGG | - | chr4_1:77201084-77201103 | None:intergenic | 60.0% | |
| GATCGGAGGTCGATAGGTGG+TGG | - | chr4_1:77201207-77201226 | None:intergenic | 60.0% | |
| GTGGATCGGAGGTCGATAGG+TGG | - | chr4_1:77201210-77201229 | None:intergenic | 60.0% | |
| ! | GAAACTTCCCCCAAGCGTCG+TGG | + | chr4_1:77201867-77201886 | Msa0573890:intron | 60.0% |
| ACTGCTGACCCACGACGCTT+GGG | - | chr4_1:77201879-77201898 | None:intergenic | 60.0% | |
| AATGGTGTTCCGCCTGACGG+CGG | + | chr4_1:77203119-77203138 | Msa0573890:CDS | 60.0% | |
| TGCTGACCCACGACGCTTGG+GGG | - | chr4_1:77201877-77201896 | None:intergenic | 65.0% | |
| CTGCTGACCCACGACGCTTG+GGG | - | chr4_1:77201878-77201897 | None:intergenic | 65.0% | |
| CACTGCTGACCCACGACGCT+TGG | - | chr4_1:77201880-77201899 | None:intergenic | 65.0% | |
| CATCGACCCGTGCTCCGCAC+GGG | - | chr4_1:77200844-77200863 | None:intergenic | 70.0% | |
| CCATCGACCCGTGCTCCGCA+CGG | - | chr4_1:77200845-77200864 | None:intergenic | 70.0% | |
| GGTGGGACCCGTGCGGAGCA+CGG | + | chr4_1:77200834-77200853 | Msa0573890:intron | 75.0% | |
| GTGGGACCCGTGCGGAGCAC+GGG | + | chr4_1:77200835-77200854 | Msa0573890:intron | 75.0% | |
| CCGTGCGGAGCACGGGTCGA+TGG | + | chr4_1:77200842-77200861 | Msa0573890:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 77196760 | 77203340 | 77196760 | ID=Msa0573890;Name=Msa0573890 |
| chr4_1 | mRNA | 77196760 | 77203340 | 77196760 | ID=Msa0573890-mRNA-1;Parent=Msa0573890;Name=Msa0573890-mRNA-1;_AED=0.11;_eAED=0.20;_QI=4|0|0|1|0|0|4|0|404 |
| chr4_1 | exon | 77196760 | 77196919 | 77196760 | ID=Msa0573890-mRNA-1:exon:27200;Parent=Msa0573890-mRNA-1 |
| chr4_1 | exon | 77197001 | 77197195 | 77197001 | ID=Msa0573890-mRNA-1:exon:27201;Parent=Msa0573890-mRNA-1 |
| chr4_1 | exon | 77197235 | 77197468 | 77197235 | ID=Msa0573890-mRNA-1:exon:27202;Parent=Msa0573890-mRNA-1 |
| chr4_1 | exon | 77202714 | 77203340 | 77202714 | ID=Msa0573890-mRNA-1:exon:27203;Parent=Msa0573890-mRNA-1 |
| chr4_1 | five_prime_UTR | 77196760 | 77196763 | 77196760 | ID=Msa0573890-mRNA-1:five_prime_utr;Parent=Msa0573890-mRNA-1 |
| chr4_1 | CDS | 77196764 | 77196919 | 77196764 | ID=Msa0573890-mRNA-1:cds;Parent=Msa0573890-mRNA-1 |
| chr4_1 | CDS | 77197001 | 77197195 | 77197001 | ID=Msa0573890-mRNA-1:cds;Parent=Msa0573890-mRNA-1 |
| chr4_1 | CDS | 77197235 | 77197468 | 77197235 | ID=Msa0573890-mRNA-1:cds;Parent=Msa0573890-mRNA-1 |
| chr4_1 | CDS | 77202714 | 77203340 | 77202714 | ID=Msa0573890-mRNA-1:cds;Parent=Msa0573890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
