Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0854320 | XP_003615850.1 | 55.000 | 160 | 45 | 7 | 6 | 149 | 35 | 183 | 5.67e-36 | 137 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0854320 | G7JZN2 | 55.000 | 160 | 45 | 7 | 6 | 149 | 35 | 183 | 2.71e-36 | 137 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0028660 | Msa0854320 | 0.816402 | 5.633970e-52 | -8.615850e-47 |
Msa0043980 | Msa0854320 | 0.811626 | 6.372029e-51 | -8.615850e-47 |
Msa0086420 | Msa0854320 | 0.805285 | 1.437452e-49 | -8.615850e-47 |
Msa0089820 | Msa0854320 | 0.812833 | 3.475292e-51 | -8.615850e-47 |
Msa0090550 | Msa0854320 | 0.808106 | 3.644415e-50 | -8.615850e-47 |
Msa0104800 | Msa0854320 | 0.828709 | 7.732794e-55 | -8.615850e-47 |
Msa0608160 | Msa0854320 | 0.802666 | 5.035716e-49 | -8.615850e-47 |
Msa0643320 | Msa0854320 | 0.804787 | 1.826638e-49 | -8.615850e-47 |
Msa0644660 | Msa0854320 | 0.800134 | 1.662086e-48 | -8.615850e-47 |
Msa0648080 | Msa0854320 | 0.804987 | 1.659256e-49 | -8.615850e-47 |
Msa0683140 | Msa0854320 | 0.804377 | 2.224193e-49 | -8.615850e-47 |
Msa0683600 | Msa0854320 | 0.806866 | 6.680620e-50 | -8.615850e-47 |
Msa0721280 | Msa0854320 | 0.809928 | 1.484364e-50 | -8.615850e-47 |
Msa0784380 | Msa0854320 | 0.806683 | 7.303559e-50 | -8.615850e-47 |
Msa0790660 | Msa0854320 | -0.809933 | 1.481327e-50 | -8.615850e-47 |
Msa0793380 | Msa0854320 | 0.803645 | 3.158387e-49 | -8.615850e-47 |
Msa0804230 | Msa0854320 | 0.814375 | 1.590844e-51 | -8.615850e-47 |
Msa0151180 | Msa0854320 | 0.809113 | 2.221850e-50 | -8.615850e-47 |
Msa0189520 | Msa0854320 | 0.804538 | 2.059397e-49 | -8.615850e-47 |
Msa0228070 | Msa0854320 | 0.803360 | 3.617871e-49 | -8.615850e-47 |
Msa0229380 | Msa0854320 | 0.808873 | 2.500573e-50 | -8.615850e-47 |
Msa0233370 | Msa0854320 | 0.802670 | 5.024131e-49 | -8.615850e-47 |
Msa0385490 | Msa0854320 | 0.814367 | 1.597303e-51 | -8.615850e-47 |
Msa0397540 | Msa0854320 | 0.808453 | 3.073964e-50 | -8.615850e-47 |
Msa0412840 | Msa0854320 | 0.816411 | 5.608126e-52 | -8.615850e-47 |
Msa0457510 | Msa0854320 | 0.831916 | 1.272317e-55 | -8.615850e-47 |
Msa0481280 | Msa0854320 | 0.806234 | 9.082630e-50 | -8.615850e-47 |
Msa0256330 | Msa0854320 | 0.810346 | 1.206534e-50 | -8.615850e-47 |
Msa0271360 | Msa0854320 | 0.808704 | 2.716964e-50 | -8.615850e-47 |
Msa0275000 | Msa0854320 | 0.806754 | 7.053700e-50 | -8.615850e-47 |
Msa0295330 | Msa0854320 | 0.813226 | 2.849719e-51 | -8.615850e-47 |
Msa0357830 | Msa0854320 | 0.800786 | 1.223750e-48 | -8.615850e-47 |
Msa0498650 | Msa0854320 | 0.805958 | 1.038080e-49 | -8.615850e-47 |
Msa0510840 | Msa0854320 | 0.806402 | 8.372329e-50 | -8.615850e-47 |
Msa0521740 | Msa0854320 | 0.804759 | 1.851866e-49 | -8.615850e-47 |
Msa0555450 | Msa0854320 | 0.819392 | 1.189478e-52 | -8.615850e-47 |
Msa0592440 | Msa0854320 | 0.813619 | 2.335797e-51 | -8.615850e-47 |
Msa0854320 | Msa0887250 | 0.808312 | 3.294921e-50 | -8.615850e-47 |
Msa0854320 | Msa0890550 | 0.807626 | 4.610323e-50 | -8.615850e-47 |
Msa0854320 | Msa0962840 | 0.804506 | 2.091075e-49 | -8.615850e-47 |
Msa0854320 | Msa0970030 | 0.801231 | 9.928186e-49 | -8.615850e-47 |
Msa0854320 | Msa0971020 | 0.812698 | 3.719774e-51 | -8.615850e-47 |
Msa0854320 | Msa0980880 | 0.811356 | 7.293161e-51 | -8.615850e-47 |
Msa0854320 | Msa0994370 | 0.816085 | 6.632325e-52 | -8.615850e-47 |
Msa0854320 | Msa1012830 | 0.812675 | 3.763542e-51 | -8.615850e-47 |
Msa0854320 | Msa1024750 | 0.813141 | 2.974107e-51 | -8.615850e-47 |
Msa0854320 | Msa1063510 | 0.816106 | 6.560138e-52 | -8.615850e-47 |
Msa0854320 | Msa1089320 | 0.804365 | 2.237682e-49 | -8.615850e-47 |
Msa0854320 | Msa1091940 | 0.806261 | 8.962460e-50 | -8.615850e-47 |
Msa0854320 | Msa1133250 | 0.800859 | 1.182788e-48 | -8.615850e-47 |
Msa0854320 | Msa1147970 | 0.801568 | 8.468469e-49 | -8.615850e-47 |
Msa0854320 | Msa1168580 | 0.812385 | 4.353626e-51 | -8.615850e-47 |
Msa0854320 | Msa1172400 | 0.814103 | 1.826830e-51 | -8.615850e-47 |
Msa0854320 | Msa1174040 | 0.802216 | 6.232916e-49 | -8.615850e-47 |
Msa0854320 | Msa1181250 | 0.828394 | 9.212442e-55 | -8.615850e-47 |
Msa0854320 | Msa1181330 | 0.826769 | 2.261224e-54 | -8.615850e-47 |
Msa0854320 | Msa1210020 | 0.808854 | 2.523743e-50 | -8.615850e-47 |
Msa0854320 | Msa1254730 | 0.801303 | 9.596695e-49 | -8.615850e-47 |
Msa0854320 | Msa1270660 | 0.807802 | 4.230855e-50 | -8.615850e-47 |
Msa0854320 | Msa1298510 | 0.808196 | 3.487472e-50 | -8.615850e-47 |
Msa0854320 | Msa1307180 | 0.807560 | 4.762508e-50 | -8.615850e-47 |
Msa0854320 | Msa1316360 | 0.818568 | 1.831581e-52 | -8.615850e-47 |
Msa0854320 | Msa1332040 | -0.813275 | 2.780272e-51 | -8.615850e-47 |
Msa0854320 | Msa1332050 | 0.800450 | 1.432843e-48 | -8.615850e-47 |
Msa0854320 | Msa1356440 | 0.804083 | 2.560521e-49 | -8.615850e-47 |
Msa0854320 | Msa1357430 | 0.802180 | 6.339602e-49 | -8.615850e-47 |
Msa0854320 | Msa1357890 | 0.814704 | 1.345652e-51 | -8.615850e-47 |
Msa0854320 | Msa1364210 | 0.803736 | 3.023997e-49 | -8.615850e-47 |
Msa0854320 | Msa1398090 | 0.816127 | 6.489828e-52 | -8.615850e-47 |
Msa0854320 | Msa1403340 | 0.826884 | 2.123659e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0854320 | MtrunA17_Chr5g0431541 | 55.000 | 160 | 45 | 7 | 6 | 149 | 35 | 183 | 5.21e-40 | 137 |
Msa0854320 | MtrunA17_Chr5g0431561 | 55.000 | 160 | 45 | 7 | 6 | 149 | 35 | 183 | 8.87e-40 | 137 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 64 sgRNAs with CRISPR-Local
Find 563 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATTGTAGATGGTGCTTC+AGG | 0.276592 | 5_4:+46757023 | None:intergenic |
TTTCTCTTGGAACTTGTCAT+TGG | 0.287091 | 5_4:+46747809 | None:intergenic |
GACAAAATGAACGGTTCGTC+TGG | 0.292903 | 5_4:+46747992 | None:intergenic |
ATCCAGCAATTTCTTTCTCT+TGG | 0.306897 | 5_4:+46747796 | None:intergenic |
ATCATCTTGGAATGAGGCTT+TGG | 0.335865 | 5_4:+46748776 | None:intergenic |
TCCAAGAGTTCGTCTTCTTC+AGG | 0.347334 | 5_4:+46748973 | None:intergenic |
AAATTCTTCTTCATTGTAGA+TGG | 0.349475 | 5_4:+46757014 | None:intergenic |
ATGTTTATCAACTTGTTTAG+TGG | 0.353117 | 5_4:+46749042 | None:intergenic |
CGTAGAGACCTAACGGATCT+TGG | 0.360673 | 5_4:-46747860 | Msa0854320:CDS |
CAATGATGATCTTGGGGATC+AGG | 0.361378 | 5_4:-46747834 | Msa0854320:CDS |
AGCTGATATTGCTCTGATAA+TGG | 0.368195 | 5_4:+46747914 | None:intergenic |
TCCAATGAATTTCTCTTCCA+TGG | 0.377408 | 5_4:+46747718 | None:intergenic |
TTCATCTTAGAAGATACTTC+AGG | 0.379776 | 5_4:+46749006 | None:intergenic |
AAAATAGAGCGTCATTAGTT+AGG | 0.384452 | 5_4:+46747891 | None:intergenic |
TTGGGTCCAATGATGATCTT+GGG | 0.396192 | 5_4:-46747841 | Msa0854320:CDS |
CTTGGGTCCAATGATGATCT+TGG | 0.403380 | 5_4:-46747842 | Msa0854320:CDS |
AAACAAGTTGATAAACATAA+TGG | 0.431840 | 5_4:-46749037 | Msa0854320:CDS |
TCATCTTGGAATGAGGCTTT+GGG | 0.433347 | 5_4:+46748777 | None:intergenic |
AAGAAGCTCAAGACGAATGA+TGG | 0.443037 | 5_4:-46748837 | Msa0854320:CDS |
CTGATCCCCAAGATCATCAT+TGG | 0.448577 | 5_4:+46747835 | None:intergenic |
TCCATGGAAGAGAAATTCAT+TGG | 0.449160 | 5_4:-46747719 | Msa0854320:CDS |
CATACCAAGGATCATCATCT+TGG | 0.457191 | 5_4:+46748763 | None:intergenic |
TTCCAAGAGAAAGAAATTGC+TGG | 0.464484 | 5_4:-46747798 | Msa0854320:CDS |
GTAGAGACCTAACGGATCTT+GGG | 0.467555 | 5_4:-46747859 | Msa0854320:CDS |
ACCTGAAGAAGACGAACTCT+TGG | 0.468055 | 5_4:-46748974 | Msa0854320:CDS |
GAAACAAGGAAATCACCAAT+TGG | 0.476741 | 5_4:-46748801 | Msa0854320:CDS |
GGCTGAGATTGAGATGGAAC+TGG | 0.480892 | 5_4:-46747759 | Msa0854320:CDS |
TTACTTCACGAGGAGGGGTA+TGG | 0.489006 | 5_4:+46747939 | None:intergenic |
TTTGGTTTAATTTGTAACAA+GGG | 0.505192 | 5_4:-46747622 | Msa0854320:three_prime_UTR |
GGCTTACAATACGCTGGTAT+CGG | 0.511622 | 5_4:+46748687 | None:intergenic |
ATTTGGTTTAATTTGTAACA+AGG | 0.516990 | 5_4:-46747623 | Msa0854320:three_prime_UTR |
AATGAGGCTTTGGGTCCAAT+TGG | 0.517814 | 5_4:+46748786 | None:intergenic |
GCATGGGTTAACACACTAGT+TGG | 0.520365 | 5_4:+46747599 | None:intergenic |
ACAAAATGAACGGTTCGTCT+GGG | 0.522179 | 5_4:+46747993 | None:intergenic |
CATTCCAAGATGATGATCCT+TGG | 0.525410 | 5_4:-46748767 | Msa0854320:CDS |
CAAAGAGGCTGAGATTGAGA+TGG | 0.547806 | 5_4:-46747765 | Msa0854320:CDS |
CTCTGATCAGTACAAATCCA+TGG | 0.550418 | 5_4:-46747735 | Msa0854320:CDS |
AATGATGATCTTGGGGATCA+GGG | 0.551843 | 5_4:-46747833 | Msa0854320:CDS |
AACGGTTCGTCTGGGGATTG+CGG | 0.551971 | 5_4:+46748001 | None:intergenic |
ACCTTCTCGTAGAGACCTAA+CGG | 0.553646 | 5_4:-46747867 | Msa0854320:CDS |
CATTGGAGAGCCCGCTGCGA+GGG | 0.553865 | 5_4:-46747702 | Msa0854320:CDS |
GACATGTCATGTGCAATGCA+TGG | 0.556386 | 5_4:+46747582 | None:intergenic |
CATTGGACCCAAGATCCGTT+AGG | 0.566567 | 5_4:+46747852 | None:intergenic |
TCACGAGGAGGGGTATGGAA+TGG | 0.577017 | 5_4:+46747944 | None:intergenic |
AGGATCATCATCTTGGAATG+AGG | 0.580014 | 5_4:+46748770 | None:intergenic |
ACACTTCATACCCTCGCAGC+GGG | 0.580469 | 5_4:+46747692 | None:intergenic |
ATGGAGTTACTTCACGAGGA+GGG | 0.588311 | 5_4:+46747933 | None:intergenic |
ACATGACATGTCTAAAATGA+AGG | 0.595277 | 5_4:-46747571 | Msa0854320:three_prime_UTR |
TCCGTTAGGTCTCTACGAGA+AGG | 0.607177 | 5_4:+46747866 | None:intergenic |
CAAAATGAACGGTTCGTCTG+GGG | 0.615871 | 5_4:+46747994 | None:intergenic |
ACATGTCATGTGCAATGCAT+GGG | 0.619203 | 5_4:+46747583 | None:intergenic |
AAGACGAATGATGGAAACAA+AGG | 0.620482 | 5_4:-46748828 | Msa0854320:CDS |
TGTAGAACACAGTACCTGAT+CGG | 0.628314 | 5_4:+46748291 | None:intergenic |
TCTGAACCTGACAAAATGAA+CGG | 0.634772 | 5_4:+46747983 | None:intergenic |
AACAACGAATATCCTATGCA+CGG | 0.639377 | 5_4:-46747534 | Msa0854320:three_prime_UTR |
TGGAGTTACTTCACGAGGAG+GGG | 0.645146 | 5_4:+46747934 | None:intergenic |
TCATTGGAGAGCCCGCTGCG+AGG | 0.652817 | 5_4:-46747703 | Msa0854320:CDS |
CAGGTTGGCTTACAATACGC+TGG | 0.654860 | 5_4:+46748681 | None:intergenic |
TGGGTCCAATGATGATCTTG+GGG | 0.657170 | 5_4:-46747840 | Msa0854320:CDS |
AATGGAGTTACTTCACGAGG+AGG | 0.678046 | 5_4:+46747932 | None:intergenic |
GAAACAAAGGAATTGAAACA+AGG | 0.685523 | 5_4:-46748815 | Msa0854320:CDS |
AACACTTCATACCCTCGCAG+CGG | 0.686182 | 5_4:+46747691 | None:intergenic |
TCATGATCATGATCATACCA+AGG | 0.686968 | 5_4:+46748750 | None:intergenic |
GATAATGGAGTTACTTCACG+AGG | 0.731198 | 5_4:+46747929 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTATTTTAAATTTTAAATT+TGG | - | chr5_4:46748860-46748879 | Msa0854320:CDS | 0.0% |
!!! | TTTATTTTAAATTTTAAATT+TGG | - | chr5_4:46748860-46748879 | Msa0854320:CDS | 0.0% |
!!! | TCAATTTTTTAAGTTAAAAA+TGG | - | chr5_4:46749370-46749389 | Msa0854320:intron | 10.0% |
!!! | TAAGATTTTTTTTAGAAATT+GGG | + | chr5_4:46754462-46754481 | None:intergenic | 10.0% |
!!! | ATAAGATTTTTTTTAGAAAT+TGG | + | chr5_4:46754463-46754482 | None:intergenic | 10.0% |
!!! | ATTTTTTTTCACATAATTAA+GGG | + | chr5_4:46755043-46755062 | None:intergenic | 10.0% |
!!! | AATTTTTTTTCACATAATTA+AGG | + | chr5_4:46755044-46755063 | None:intergenic | 10.0% |
!! | TATATATACATCAAATATTG+AGG | + | chr5_4:46747844-46747863 | None:intergenic | 15.0% |
!!! | TGTTTTCAATTTTATTGATA+TGG | - | chr5_4:46748985-46749004 | Msa0854320:CDS | 15.0% |
!!! | ACAAAACATATCAATTATTT+TGG | + | chr5_4:46749711-46749730 | None:intergenic | 15.0% |
!! | ATTTAATATACAATGCAATA+TGG | - | chr5_4:46750680-46750699 | Msa0854320:intron | 15.0% |
!! | AAAATGAAAACATAATAAGA+AGG | - | chr5_4:46751245-46751264 | Msa0854320:intron | 15.0% |
!! | GCAAAATAAAAAAATAAAAC+AGG | - | chr5_4:46751677-46751696 | Msa0854320:intron | 15.0% |
!! | TATTATACTTCAAGTATAAA+CGG | + | chr5_4:46751890-46751909 | None:intergenic | 15.0% |
!!! | CACTAAAAGTTATTTAAAAT+TGG | + | chr5_4:46751965-46751984 | None:intergenic | 15.0% |
!! | TATAAATACTCAATATTTGA+AGG | - | chr5_4:46752148-46752167 | Msa0854320:intron | 15.0% |
!! | ATAAATACTCAATATTTGAA+GGG | - | chr5_4:46752149-46752168 | Msa0854320:intron | 15.0% |
!!! | TTTTTTCAAGTTTGAATAAA+CGG | + | chr5_4:46752428-46752447 | None:intergenic | 15.0% |
!! | TATAATATTAATTACGTCAT+AGG | - | chr5_4:46752567-46752586 | Msa0854320:intron | 15.0% |
!! | AAGAAATAAATATTCAATTC+TGG | - | chr5_4:46753683-46753702 | Msa0854320:intron | 15.0% |
!!! | ACAATTTATTTAAAATTACG+CGG | - | chr5_4:46754665-46754684 | Msa0854320:intron | 15.0% |
!! | TAATTTACTTTCCTAAAAGA+TGG | + | chr5_4:46748034-46748053 | None:intergenic | 20.0% |
!!! | TAGCATTATTTTATTAGCTT+AGG | - | chr5_4:46748058-46748077 | Msa0854320:intron | 20.0% |
!! | ATAATGACTCAAAGTTAAAA+GGG | + | chr5_4:46748274-46748293 | None:intergenic | 20.0% |
!! | AATAATGACTCAAAGTTAAA+AGG | + | chr5_4:46748275-46748294 | None:intergenic | 20.0% |
!!! | ATTTGGTTTAATTTGTAACA+AGG | - | chr5_4:46748877-46748896 | Msa0854320:intron | 20.0% |
!!! | TTTGGTTTAATTTGTAACAA+GGG | - | chr5_4:46748878-46748897 | Msa0854320:intron | 20.0% |
!! | TAAGTCATGTTTAAGTATAA+AGG | - | chr5_4:46749106-46749125 | Msa0854320:intron | 20.0% |
!!! | AACTTGTTTTTGTTTTGTTT+TGG | - | chr5_4:46750163-46750182 | Msa0854320:intron | 20.0% |
!!! | TCCTTTAGAAATGTAATATT+TGG | - | chr5_4:46750290-46750309 | Msa0854320:intron | 20.0% |
!! | TCCAAATATTACATTTCTAA+AGG | + | chr5_4:46750294-46750313 | None:intergenic | 20.0% |
!! | ACTTTCAAATATATATTTCC+AGG | - | chr5_4:46750530-46750549 | Msa0854320:intron | 20.0% |
!!! | TTTATTTTGCTAAGATCATT+TGG | + | chr5_4:46751667-46751686 | None:intergenic | 20.0% |
!!! | TATTTGTTTTGTGTATCATT+CGG | + | chr5_4:46751817-46751836 | None:intergenic | 20.0% |
!! | CACAAAACAAATATGAATTA+TGG | - | chr5_4:46751824-46751843 | Msa0854320:intron | 20.0% |
!! | CAATAAAAATAGAGGAAAAA+AGG | + | chr5_4:46751991-46752010 | None:intergenic | 20.0% |
!!! | CTTTTTTCCTCTATTTTTAT+TGG | - | chr5_4:46751989-46752008 | Msa0854320:intron | 20.0% |
!! | TTATTGTCCAATAAAAATAG+AGG | + | chr5_4:46751999-46752018 | None:intergenic | 20.0% |
!! | TCACAAAAATTGTTTAAAAG+TGG | - | chr5_4:46752091-46752110 | Msa0854320:intron | 20.0% |
!!! | AAGTCTAGCTTTTATAATAA+AGG | + | chr5_4:46752286-46752305 | None:intergenic | 20.0% |
!!! | TTTTGATTACAATTAGTGTA+GGG | + | chr5_4:46752514-46752533 | None:intergenic | 20.0% |
!!! | TTTTTGATTACAATTAGTGT+AGG | + | chr5_4:46752515-46752534 | None:intergenic | 20.0% |
!!! | TTTTTGAAAAAAAGTGCTTA+TGG | + | chr5_4:46753459-46753478 | None:intergenic | 20.0% |
!! | GACATAAATTTCATATGATT+TGG | + | chr5_4:46753830-46753849 | None:intergenic | 20.0% |
!! | AAATTTATGTCTAAACTGAA+GGG | - | chr5_4:46753839-46753858 | Msa0854320:intron | 20.0% |
!!! | TTGAATTATTATTGCAGTTT+TGG | + | chr5_4:46753880-46753899 | None:intergenic | 20.0% |
!!! | AGAACGAAAATAATTTTCAA+AGG | + | chr5_4:46754629-46754648 | None:intergenic | 20.0% |
!!! | CAATTTATTTAAAATTACGC+GGG | - | chr5_4:46754666-46754685 | Msa0854320:intron | 20.0% |
!!! | AAACAAGTTGATAAACATAA+TGG | - | chr5_4:46755494-46755513 | Msa0854320:intron | 20.0% |
!! | TAATTTACTTTCCTAAAAGA+TGG | + | chr5_4:46748034-46748053 | None:intergenic | 20.0% |
!!! | ATTTGGTTTAATTTGTAACA+AGG | - | chr5_4:46748877-46748896 | Msa0854320:intron | 20.0% |
!!! | TTTGGTTTAATTTGTAACAA+GGG | - | chr5_4:46748878-46748897 | Msa0854320:intron | 20.0% |
! | AAATTCTTCTTCATTGTAGA+TGG | + | chr5_4:46747520-46747539 | None:intergenic | 25.0% |
!!! | TATTTTATTAGCTTAGGTCA+TGG | - | chr5_4:46748064-46748083 | Msa0854320:intron | 25.0% |
! | TACCTGATTGTCAAAATATT+TGG | + | chr5_4:46748232-46748251 | None:intergenic | 25.0% |
! | TTCAATCAATTTCTTTCTCT+TGG | + | chr5_4:46748713-46748732 | None:intergenic | 25.0% |
!! | TTCAAAGATTTTATCTTCCA+TGG | + | chr5_4:46748785-46748804 | None:intergenic | 25.0% |
! | TTTAATGTCAACACAATAGT+TGG | + | chr5_4:46748904-46748923 | None:intergenic | 25.0% |
! | AGATGTTTAAATGCTCTTAT+GGG | - | chr5_4:46749181-46749200 | Msa0854320:intron | 25.0% |
! | ATAACATTGGAAAAAGCTAA+AGG | - | chr5_4:46749273-46749292 | Msa0854320:intron | 25.0% |
!!! | TAGTAATTTTTGGATCGAAT+TGG | + | chr5_4:46749335-46749354 | None:intergenic | 25.0% |
!!! | AATGCCACTTTAGTAATTTT+TGG | + | chr5_4:46749345-46749364 | None:intergenic | 25.0% |
! | AAAAATTACTAAAGTGGCAT+TGG | - | chr5_4:46749344-46749363 | Msa0854320:intron | 25.0% |
! | TGCAACTAACAATATGAAAT+AGG | + | chr5_4:46749575-46749594 | None:intergenic | 25.0% |
! | TTTGTAGCATCAAACTAAAA+TGG | - | chr5_4:46749624-46749643 | Msa0854320:intron | 25.0% |
!!! | ACCTCATTTCTTTTGAAAAA+TGG | - | chr5_4:46749889-46749908 | Msa0854320:intron | 25.0% |
!!! | ACCATTTTTCAAAAGAAATG+AGG | + | chr5_4:46749893-46749912 | None:intergenic | 25.0% |
! | ATGAAAATCATACATGATTG+AGG | + | chr5_4:46749922-46749941 | None:intergenic | 25.0% |
!!! | TTCAAGTTTGTTATAATCTG+TGG | - | chr5_4:46749992-46750011 | Msa0854320:intron | 25.0% |
! | AAAACTAATGACTCTTTCAA+TGG | - | chr5_4:46750050-46750069 | Msa0854320:intron | 25.0% |
!!! | TACATGTTATTTTCTGCTTT+CGG | - | chr5_4:46750139-46750158 | Msa0854320:intron | 25.0% |
! | TAAACCATTATCACGTTATA+TGG | + | chr5_4:46750244-46750263 | None:intergenic | 25.0% |
! | AGAAATGTAATATTTGGACT+TGG | - | chr5_4:46750296-46750315 | Msa0854320:intron | 25.0% |
!!! | CTTTCTGTTTGTTGTTATAA+TGG | - | chr5_4:46750754-46750773 | Msa0854320:intron | 25.0% |
!!! | TTTGTTGTTATAATGGTTGA+AGG | - | chr5_4:46750761-46750780 | Msa0854320:intron | 25.0% |
!! | TTAATTGATAGTTAGTACCA+GGG | - | chr5_4:46750916-46750935 | Msa0854320:intron | 25.0% |
!!! | TGTCTCTTTACTAGTTTTAT+TGG | - | chr5_4:46751011-46751030 | Msa0854320:intron | 25.0% |
!!! | GTCTCTTTACTAGTTTTATT+GGG | - | chr5_4:46751012-46751031 | Msa0854320:intron | 25.0% |
!!! | TTACTAGTTTTATTGGGTTT+TGG | - | chr5_4:46751018-46751037 | Msa0854320:intron | 25.0% |
!!! | GAAACATATGGTTTTTTCTA+TGG | - | chr5_4:46751052-46751071 | Msa0854320:intron | 25.0% |
! | GTTTATACATGTTATATCCA+TGG | - | chr5_4:46751074-46751093 | Msa0854320:intron | 25.0% |
!!! | TAGTTTTTCAAATTTGTTGC+AGG | - | chr5_4:46751109-46751128 | Msa0854320:intron | 25.0% |
! | TTCAAAAGTAAAAATCCTTG+TGG | - | chr5_4:46751135-46751154 | Msa0854320:intron | 25.0% |
! | ATAAGAAGGAACAAAATTAG+TGG | - | chr5_4:46751259-46751278 | Msa0854320:intron | 25.0% |
! | TAAGAAGGAACAAAATTAGT+GGG | - | chr5_4:46751260-46751279 | Msa0854320:intron | 25.0% |
! | TTCCAAATATGTTACATCTA+TGG | + | chr5_4:46751287-46751306 | None:intergenic | 25.0% |
! | ACTAAAACTCTTTAGTAACA+AGG | - | chr5_4:46751437-46751456 | Msa0854320:intron | 25.0% |
! | CTAAAACTCTTTAGTAACAA+GGG | - | chr5_4:46751438-46751457 | Msa0854320:intron | 25.0% |
!! | CTAACTTGCAAAGAAAATTT+GGG | + | chr5_4:46751579-46751598 | None:intergenic | 25.0% |
!! | TCTAACTTGCAAAGAAAATT+TGG | + | chr5_4:46751580-46751599 | None:intergenic | 25.0% |
! | AAAAATAAAACAGGAACAAG+TGG | - | chr5_4:46751686-46751705 | Msa0854320:intron | 25.0% |
!!! | TATGTATTGGCTTTTTCTTT+AGG | + | chr5_4:46751759-46751778 | None:intergenic | 25.0% |
!!! | CAATTAATACATGTTTTGGA+GGG | + | chr5_4:46752368-46752387 | None:intergenic | 25.0% |
! | TTTGATTACAATTAGTGTAG+GGG | + | chr5_4:46752513-46752532 | None:intergenic | 25.0% |
! | TATTGAAAATCGCAAAGAAA+TGG | + | chr5_4:46753031-46753050 | None:intergenic | 25.0% |
! | GTTTATGCTAGTATAAATGT+TGG | + | chr5_4:46753151-46753170 | None:intergenic | 25.0% |
! | TATGAATGGTACATTTGAAA+CGG | + | chr5_4:46753260-46753279 | None:intergenic | 25.0% |
! | TTTCAAATGTACCATTCATA+AGG | - | chr5_4:46753260-46753279 | Msa0854320:intron | 25.0% |
! | ATCACACATTAGCAATTTAA+TGG | - | chr5_4:46753330-46753349 | Msa0854320:intron | 25.0% |
! | GAAATTTATGTCTAAACTGA+AGG | - | chr5_4:46753838-46753857 | Msa0854320:intron | 25.0% |
! | TCAAACAATCTGAATTGAAT+AGG | - | chr5_4:46754182-46754201 | Msa0854320:intron | 25.0% |
! | AGAGGAAGAAAAAAAATGAA+GGG | - | chr5_4:46754383-46754402 | Msa0854320:intron | 25.0% |
!! | ATGAAGGGAAAAAATGTTTT+TGG | - | chr5_4:46754398-46754417 | Msa0854320:intron | 25.0% |
! | ATTAAGTGGTTATGAATTAG+CGG | + | chr5_4:46754534-46754553 | None:intergenic | 25.0% |
! | ATAAACGATGATAAAACGAA+AGG | + | chr5_4:46754709-46754728 | None:intergenic | 25.0% |
!!! | CTTACTTTTAGGTTTATCTT+TGG | + | chr5_4:46754972-46754991 | None:intergenic | 25.0% |
!!! | AGTACTATCTACTTACTTTT+AGG | + | chr5_4:46754983-46755002 | None:intergenic | 25.0% |
!! | TTTTTCACATAATTAAGGGT+TGG | + | chr5_4:46755039-46755058 | None:intergenic | 25.0% |
!!! | AACTTGTTTAGTGGTTTTTT+AGG | + | chr5_4:46755483-46755502 | None:intergenic | 25.0% |
!! | ATGTTTATCAACTTGTTTAG+TGG | + | chr5_4:46755492-46755511 | None:intergenic | 25.0% |
! | TATATACACATCAAATACTG+AGG | + | chr5_4:46755883-46755902 | None:intergenic | 25.0% |
!!! | TAGCATTCTTTTATTAGCTT+AGG | - | chr5_4:46756079-46756098 | Msa0854320:intron | 25.0% |
! | ATGATGACTCAAAGTTAAAA+GGG | + | chr5_4:46756273-46756292 | None:intergenic | 25.0% |
TAAGTGTATTGCAGAACAAT+TGG | - | chr5_4:46747579-46747598 | Msa0854320:three_prime_UTR | 30.0% | |
AAGTGTATTGCAGAACAATT+GGG | - | chr5_4:46747580-46747599 | Msa0854320:three_prime_UTR | 30.0% | |
TCTATATGAAGCACAGAAAA+AGG | + | chr5_4:46747634-46747653 | None:intergenic | 30.0% | |
TAAGTGTATTGCAGAACAAT+TGG | - | chr5_4:46747579-46747598 | Msa0854320:three_prime_UTR | 30.0% | |
AAGTGTATTGCAGAACAATT+GGG | - | chr5_4:46747580-46747599 | Msa0854320:three_prime_UTR | 30.0% | |
!!! | TGCCAAATATTTTGACAATC+AGG | - | chr5_4:46748227-46748246 | Msa0854320:intron | 30.0% |
AATGGGAAAGAACTGTAAAA+GGG | + | chr5_4:46748465-46748484 | None:intergenic | 30.0% | |
ACAAAAGATAGAGCAAATGT+TGG | + | chr5_4:46748490-46748509 | None:intergenic | 30.0% | |
GAGATGTTTAAATGCTCTTA+TGG | - | chr5_4:46749180-46749199 | Msa0854320:intron | 30.0% | |
TTATGGGTCTCAAATTAAGA+AGG | - | chr5_4:46749197-46749216 | Msa0854320:intron | 30.0% | |
!! | AGCTTTTTCCAATGTTATGT+AGG | + | chr5_4:46749271-46749290 | None:intergenic | 30.0% |
CGATCCAAAAATTACTAAAG+TGG | - | chr5_4:46749338-46749357 | Msa0854320:intron | 30.0% | |
TGGCATGAAAAAGTAAAATC+CGG | - | chr5_4:46749390-46749409 | Msa0854320:intron | 30.0% | |
GATAGAACCAGATAAAAATC+AGG | + | chr5_4:46749464-46749483 | None:intergenic | 30.0% | |
!!! | TTTTTATCTGGTTCTATCAC+AGG | - | chr5_4:46749466-46749485 | Msa0854320:intron | 30.0% |
TTCGGAAAAAGAAAAGATCT+CGG | + | chr5_4:46749652-46749671 | None:intergenic | 30.0% | |
CACTTAGACATAAATAGTGA+TGG | - | chr5_4:46749789-46749808 | Msa0854320:intron | 30.0% | |
! | GGTCTTCATTACTATGATTT+TGG | + | chr5_4:46749872-46749891 | None:intergenic | 30.0% |
TTCATTTGATGTTCATGCTA+TGG | - | chr5_4:46749937-46749956 | Msa0854320:intron | 30.0% | |
GAATAGGAAAGAAAGATAAG+AGG | - | chr5_4:46750116-46750135 | Msa0854320:intron | 30.0% | |
GAATCCATATAACGTGATAA+TGG | - | chr5_4:46750237-46750256 | Msa0854320:intron | 30.0% | |
GAATTCTACTCCTGTATAAA+TGG | - | chr5_4:46750362-46750381 | Msa0854320:intron | 30.0% | |
TGCTTGCTTCATATGTATTA+TGG | - | chr5_4:46750656-46750675 | Msa0854320:intron | 30.0% | |
ATATGGAATTGAATAGTCTG+AGG | - | chr5_4:46750697-46750716 | Msa0854320:intron | 30.0% | |
ATAATGGTTGAAGGATTCTT+AGG | - | chr5_4:46750770-46750789 | Msa0854320:intron | 30.0% | |
AACCTCAAACAAACATACAA+TGG | + | chr5_4:46750846-46750865 | None:intergenic | 30.0% | |
GGTACTAACTATCAATTAAC+AGG | + | chr5_4:46750915-46750934 | None:intergenic | 30.0% | |
! | GTTAATTGATAGTTAGTACC+AGG | - | chr5_4:46750915-46750934 | Msa0854320:intron | 30.0% |
GCTTAATAAGCTGAAACATA+TGG | - | chr5_4:46751040-46751059 | Msa0854320:intron | 30.0% | |
AACTATAAAATTCAGCTCCA+TGG | + | chr5_4:46751094-46751113 | None:intergenic | 30.0% | |
AAGAAGGAACAAAATTAGTG+GGG | - | chr5_4:46751261-46751280 | Msa0854320:intron | 30.0% | |
!! | TCTTTCTTTTGAAGAAGTCA+TGG | + | chr5_4:46751724-46751743 | None:intergenic | 30.0% |
!!! | ATTGGCTTTTTCTTTAGGTA+TGG | + | chr5_4:46751754-46751773 | None:intergenic | 30.0% |
TTGAATCGCAAACTATGTAT+TGG | + | chr5_4:46751772-46751791 | None:intergenic | 30.0% | |
TAATATCTGTTTACGTGATG+AGG | - | chr5_4:46751923-46751942 | Msa0854320:intron | 30.0% | |
TCATAATTGTTAGTAGAGCT+AGG | + | chr5_4:46752184-46752203 | None:intergenic | 30.0% | |
! | TAAGAAGATTGTGAGGTTTT+GGG | + | chr5_4:46752237-46752256 | None:intergenic | 30.0% |
! | ATAAGAAGATTGTGAGGTTT+TGG | + | chr5_4:46752238-46752257 | None:intergenic | 30.0% |
AAGAAGATAAGAAGATTGTG+AGG | + | chr5_4:46752244-46752263 | None:intergenic | 30.0% | |
! | TTATAAAAGCTAGACTTGCT+TGG | - | chr5_4:46752289-46752308 | Msa0854320:intron | 30.0% |
!! | GCAATTAATACATGTTTTGG+AGG | + | chr5_4:46752369-46752388 | None:intergenic | 30.0% |
! | CGAGCAATTAATACATGTTT+TGG | + | chr5_4:46752372-46752391 | None:intergenic | 30.0% |
GTATTAAAGCCTAATCAAGT+CGG | - | chr5_4:46752479-46752498 | Msa0854320:intron | 30.0% | |
AGTGTCATATACTTAGTGTA+GGG | + | chr5_4:46752548-46752567 | None:intergenic | 30.0% | |
TAGTGTCATATACTTAGTGT+AGG | + | chr5_4:46752549-46752568 | None:intergenic | 30.0% | |
ATGCTAGTATAAATGTTGGA+GGG | + | chr5_4:46753147-46753166 | None:intergenic | 30.0% | |
TATGCTAGTATAAATGTTGG+AGG | + | chr5_4:46753148-46753167 | None:intergenic | 30.0% | |
TGGTATAATTTACTACCCAA+AGG | - | chr5_4:46753350-46753369 | Msa0854320:intron | 30.0% | |
TATAATTTACTACCCAAAGG+TGG | - | chr5_4:46753353-46753372 | Msa0854320:intron | 30.0% | |
ATAATTTACTACCCAAAGGT+GGG | - | chr5_4:46753354-46753373 | Msa0854320:intron | 30.0% | |
ATAGCTTATTGTTCTGCTTT+CGG | - | chr5_4:46753489-46753508 | Msa0854320:intron | 30.0% | |
ATTCTGTGAAATTGAAGCAA+TGG | + | chr5_4:46753560-46753579 | None:intergenic | 30.0% | |
ATTGAAGTTTGAGTCGAAAT+TGG | + | chr5_4:46753641-46753660 | None:intergenic | 30.0% | |
TGATAGACTTAGTAAGAGTT+TGG | + | chr5_4:46753664-46753683 | None:intergenic | 30.0% | |
GTATGAATTGCTAAGTTGTT+GGG | + | chr5_4:46753949-46753968 | None:intergenic | 30.0% | |
!! | TTTGATTCTTGGTTCTAACT+TGG | - | chr5_4:46753976-46753995 | Msa0854320:intron | 30.0% |
!!! | TGATCTTTGGTGTTTTGATT+TGG | + | chr5_4:46754075-46754094 | None:intergenic | 30.0% |
!! | CATGTAAACTTGTTGATCTT+TGG | + | chr5_4:46754088-46754107 | None:intergenic | 30.0% |
TCTGAATTGAATAGGAAACA+TGG | - | chr5_4:46754190-46754209 | Msa0854320:intron | 30.0% | |
TGAATAGGAAACATGGAATT+TGG | - | chr5_4:46754197-46754216 | Msa0854320:intron | 30.0% | |
GAATAGGAAACATGGAATTT+GGG | - | chr5_4:46754198-46754217 | Msa0854320:intron | 30.0% | |
AATAGGAAACATGGAATTTG+GGG | - | chr5_4:46754199-46754218 | Msa0854320:intron | 30.0% | |
!!! | TTTTCATGTCGATTTTAGTG+AGG | - | chr5_4:46754311-46754330 | Msa0854320:intron | 30.0% |
GAGAGGAAGAAAAAAAATGA+AGG | - | chr5_4:46754382-46754401 | Msa0854320:intron | 30.0% | |
!!! | TTTGGAATGTTTTAGAAGCT+TGG | - | chr5_4:46754416-46754435 | Msa0854320:intron | 30.0% |
TTCTCGTATTACTATTCCAA+CGG | + | chr5_4:46754566-46754585 | None:intergenic | 30.0% | |
TTGAGAAAATCGACGATATT+TGG | + | chr5_4:46754594-46754613 | None:intergenic | 30.0% | |
TGGTATATTGCGTTTAATTC+TGG | - | chr5_4:46754885-46754904 | Msa0854320:intron | 30.0% | |
! | TTTTGCAGATTGATCCATAA+TGG | - | chr5_4:46754946-46754965 | Msa0854320:intron | 30.0% |
TGAAGAAGAAGAAGAAGTAA+GGG | + | chr5_4:46755011-46755030 | None:intergenic | 30.0% | |
ATGAAGAAGAAGAAGAAGTA+AGG | + | chr5_4:46755012-46755031 | None:intergenic | 30.0% | |
AACGCGTAAATTCAAAGAAA+CGG | - | chr5_4:46755451-46755470 | Msa0854320:intron | 30.0% | |
TTCATCTTAGAAGATACTTC+AGG | + | chr5_4:46755528-46755547 | None:intergenic | 30.0% | |
GAAACAAAGGAATTGAAACA+AGG | - | chr5_4:46755716-46755735 | Msa0854320:intron | 30.0% | |
!! | TCTTTTATTAGCTTAGGTCA+TGG | - | chr5_4:46756085-46756104 | Msa0854320:intron | 30.0% |
ACATATAAATCACCAAGAGT+GGG | + | chr5_4:46756150-46756169 | None:intergenic | 30.0% | |
AACATATAAATCACCAAGAG+TGG | + | chr5_4:46756151-46756170 | None:intergenic | 30.0% | |
TACCTGATCGGAAAAATATT+TGG | + | chr5_4:46756231-46756250 | None:intergenic | 30.0% | |
CATGATGACTCAAAGTTAAA+AGG | + | chr5_4:46756274-46756293 | None:intergenic | 30.0% | |
!!! | AAAAAGAGCACGAGTTTTTT+GGG | + | chr5_4:46756366-46756385 | None:intergenic | 30.0% |
AATGGGAAAGAACAGTAAAA+GGG | + | chr5_4:46756460-46756479 | None:intergenic | 30.0% | |
! | AAAATAGAGCGTCATTAGTT+AGG | + | chr5_4:46756643-46756662 | None:intergenic | 30.0% |
! | ACATGACATGTCTAAAATGA+AGG | - | chr5_4:46756960-46756979 | Msa0854320:intron | 30.0% |
! | TGCAAGAATTCGTCTTTTTC+AGG | + | chr5_4:46747544-46747563 | None:intergenic | 35.0% |
!! | TGTTTTGAGCTTCTTTGAGT+CGG | + | chr5_4:46747671-46747690 | None:intergenic | 35.0% |
AAGAAGCTCAAAACAGATGA+CGG | - | chr5_4:46747676-46747695 | Msa0854320:three_prime_UTR | 35.0% | |
!! | AAAACAGATGACGGAAACAA+AGG | - | chr5_4:46747685-46747704 | Msa0854320:exon | 35.0% |
ATCATCTTGAAATGAGGCTT+TGG | + | chr5_4:46747719-46747738 | None:intergenic | 35.0% | |
AGGTTCATCATCTTGAAATG+AGG | + | chr5_4:46747725-46747744 | None:intergenic | 35.0% | |
CATTTCAAGATGATGAACCT+TGG | - | chr5_4:46747725-46747744 | Msa0854320:CDS | 35.0% | |
TCATGATCATGATCATACCA+AGG | + | chr5_4:46747745-46747764 | None:intergenic | 35.0% | |
CAAATATTGAGGAACAAGTC+AGG | + | chr5_4:46747833-46747852 | None:intergenic | 35.0% | |
CTTCTTCCGAAGTTAATTGA+CGG | - | chr5_4:46747909-46747928 | Msa0854320:CDS | 35.0% | |
TAACTTCATGCCAATGTTAC+AGG | + | chr5_4:46747938-46747957 | None:intergenic | 35.0% | |
! | GCATTCAAGTACCATCTTTT+AGG | - | chr5_4:46748020-46748039 | Msa0854320:intron | 35.0% |
TATTCCTAATCTCCCTTTCT+TGG | - | chr5_4:46748114-46748133 | Msa0854320:intron | 35.0% | |
AGATGTGAATCACCAAGAAA+GGG | + | chr5_4:46748129-46748148 | None:intergenic | 35.0% | |
AAGATGTGAATCACCAAGAA+AGG | + | chr5_4:46748130-46748149 | None:intergenic | 35.0% | |
!! | AAAAAGAGCACGGGTATTTT+AGG | + | chr5_4:46748368-46748387 | None:intergenic | 35.0% |
AGCAACAAACAAAAAGAGCA+CGG | + | chr5_4:46748378-46748397 | None:intergenic | 35.0% | |
GATTTCCACTAGAATCAACA+TGG | - | chr5_4:46748409-46748428 | Msa0854320:intron | 35.0% | |
CAATGGGAAAGAACTGTAAA+AGG | + | chr5_4:46748466-46748485 | None:intergenic | 35.0% | |
TAGAGCAAATGTTGGACAAT+GGG | + | chr5_4:46748482-46748501 | None:intergenic | 35.0% | |
ATAGAGCAAATGTTGGACAA+TGG | + | chr5_4:46748483-46748502 | None:intergenic | 35.0% | |
!!! | TCTCTTTTTTTCCCGTTTGT+AGG | - | chr5_4:46748510-46748529 | Msa0854320:intron | 35.0% |
TCTGAACCTGACAAAATGAA+TGG | + | chr5_4:46748556-46748575 | None:intergenic | 35.0% | |
ATAGAGACCTAACTGATCTT+GGG | - | chr5_4:46748638-46748657 | Msa0854320:intron | 35.0% | |
TTTCTCTTGGATCTTGTCAT+TGG | + | chr5_4:46748700-46748719 | None:intergenic | 35.0% | |
GATTGAAGAATGTTACGAAG+AGG | - | chr5_4:46748726-46748745 | Msa0854320:CDS | 35.0% | |
! | GACAACTCATTTTCACATAG+AGG | + | chr5_4:46748956-46748975 | None:intergenic | 35.0% |
! | TTTTCCACATCATGAAGTGA+AGG | + | chr5_4:46749047-46749066 | None:intergenic | 35.0% |
!! | CATGCTTTAAAATGTCTGTC+AGG | + | chr5_4:46749134-46749153 | None:intergenic | 35.0% |
GAACAAGTCCTACATAACAT+TGG | - | chr5_4:46749260-46749279 | Msa0854320:intron | 35.0% | |
! | TCGTGTTCCTGATTTTTATC+TGG | - | chr5_4:46749454-46749473 | Msa0854320:intron | 35.0% |
TTACAGGTGTCAATTGGATT+GGG | - | chr5_4:46749493-46749512 | Msa0854320:intron | 35.0% | |
TAATCAAAATTAGACCGGAC+AGG | + | chr5_4:46749545-46749564 | None:intergenic | 35.0% | |
CGAGGTAATCAAAATTAGAC+CGG | + | chr5_4:46749550-46749569 | None:intergenic | 35.0% | |
!!! | CGGTCTAATTTTGATTACCT+CGG | - | chr5_4:46749548-46749567 | Msa0854320:intron | 35.0% |
AACAATATGAAATAGGACCG+AGG | + | chr5_4:46749568-46749587 | None:intergenic | 35.0% | |
TCGGAAAAAGAAAAGATCTC+GGG | + | chr5_4:46749651-46749670 | None:intergenic | 35.0% | |
! | TGTGGCTTTTGATACTTGTT+AGG | - | chr5_4:46750010-46750029 | Msa0854320:intron | 35.0% |
!! | TTAGTTTTTCAATGCGAGTG+AGG | + | chr5_4:46750038-46750057 | None:intergenic | 35.0% |
TCTTTCAATGGTGAAACATC+TGG | - | chr5_4:46750062-46750081 | Msa0854320:intron | 35.0% | |
TGGTGAAACATCTGGTTAAT+TGG | - | chr5_4:46750070-46750089 | Msa0854320:intron | 35.0% | |
!!! | GTTTTGGTTTCTGCTACTTT+TGG | - | chr5_4:46750179-46750198 | Msa0854320:intron | 35.0% |
TTGAACTGAGCCATTTATAC+AGG | + | chr5_4:46750375-46750394 | None:intergenic | 35.0% | |
CATCAGCAAAAACAGATAGT+TGG | + | chr5_4:46750409-46750428 | None:intergenic | 35.0% | |
!!! | ACTATCTGTTTTTGCTGATG+TGG | - | chr5_4:46750409-46750428 | Msa0854320:intron | 35.0% |
TGAAGATAGTAAAACACGCA+AGG | + | chr5_4:46750438-46750457 | None:intergenic | 35.0% | |
! | TTGCGTGTTTTACTATCTTC+AGG | - | chr5_4:46750437-46750456 | Msa0854320:intron | 35.0% |
!! | TATCTTCAGGTTGTTGCATT+TGG | - | chr5_4:46750450-46750469 | Msa0854320:intron | 35.0% |
!! | GCATTAAGCTTTAAGTTTCC+TGG | + | chr5_4:46750551-46750570 | None:intergenic | 35.0% |
GGTTCAATAGGAAAAACAGA+AGG | - | chr5_4:46750608-46750627 | Msa0854320:intron | 35.0% | |
GAGGTTATTGATGTCAAACT+AGG | - | chr5_4:46750716-46750735 | Msa0854320:intron | 35.0% | |
! | GTTGAAGGATTCTTAGGTTT+TGG | - | chr5_4:46750776-46750795 | Msa0854320:intron | 35.0% |
TGCCATTGTATGTTTGTTTG+AGG | - | chr5_4:46750841-46750860 | Msa0854320:intron | 35.0% | |
!! | ATATCAGAAGTGGCTTTTTC+TGG | - | chr5_4:46750953-46750972 | Msa0854320:intron | 35.0% |
!!! | AAGTGGCTTTTTCTGGTTAT+AGG | - | chr5_4:46750960-46750979 | Msa0854320:intron | 35.0% |
GGCCATAGATGTAACATATT+TGG | - | chr5_4:46751282-46751301 | Msa0854320:intron | 35.0% | |
CTTTGCAAGTTAGACCTTTA+AGG | - | chr5_4:46751586-46751605 | Msa0854320:intron | 35.0% | |
CACTGTGTTGTGTTAACAAT+GGG | - | chr5_4:46751612-46751631 | Msa0854320:intron | 35.0% | |
ACTGTGTTGTGTTAACAATG+GGG | - | chr5_4:46751613-46751632 | Msa0854320:intron | 35.0% | |
TAACAGCAGAGAGAGAAAAA+TGG | - | chr5_4:46752016-46752035 | Msa0854320:intron | 35.0% | |
GGAAAAAAGCTAGGGAATTA+GGG | + | chr5_4:46752347-46752366 | None:intergenic | 35.0% | |
!! | TTTTGGAGGGAAAAAAGCTA+GGG | + | chr5_4:46752355-46752374 | None:intergenic | 35.0% |
GTGTCATATACTTAGTGTAG+GGG | + | chr5_4:46752547-46752566 | None:intergenic | 35.0% | |
TTATCTCTCGTTGTAGCAAA+CGG | - | chr5_4:46752595-46752614 | Msa0854320:intron | 35.0% | |
ATAATGTAGCCTATGACGTA+CGG | + | chr5_4:46752579-46752598 | None:intergenic | 35.0% | |
TTATCTCTCGTTGTAGCAAA+CGG | - | chr5_4:46752595-46752614 | Msa0854320:intron | 35.0% | |
ATAATGTAGCCTATGACGTA+CGG | + | chr5_4:46752579-46752598 | None:intergenic | 35.0% | |
TTATCTCTCGTTGTAGCAAA+CGG | - | chr5_4:46752595-46752614 | Msa0854320:intron | 35.0% | |
TTATCTCTCGTTGTAGCAAA+CGG | - | chr5_4:46752595-46752614 | Msa0854320:intron | 35.0% | |
ATAATGTAGCCTATGACGTA+CGG | + | chr5_4:46752579-46752598 | None:intergenic | 35.0% | |
TTATCTCTCGTTGTAGCAAA+CGG | - | chr5_4:46752595-46752614 | Msa0854320:intron | 35.0% | |
ATAATGTAGCCTATGACGTA+CGG | + | chr5_4:46752579-46752598 | None:intergenic | 35.0% | |
TTATCTCTCGTTGTAGCAAA+CGG | - | chr5_4:46752595-46752614 | Msa0854320:intron | 35.0% | |
TGACTGTTATGCCTTATGAA+TGG | + | chr5_4:46753274-46753293 | None:intergenic | 35.0% | |
TAGTTAGAAAACCCACCTTT+GGG | + | chr5_4:46753368-46753387 | None:intergenic | 35.0% | |
TTAGTTAGAAAACCCACCTT+TGG | + | chr5_4:46753369-46753388 | None:intergenic | 35.0% | |
!! | AAGGTGGGTTTTCTAACTAA+AGG | - | chr5_4:46753369-46753388 | Msa0854320:intron | 35.0% |
!! | AAAAAAGTGCTTATGGAGCA+TGG | + | chr5_4:46753452-46753471 | None:intergenic | 35.0% |
GAAAGCAGAACAATAAGCTA+TGG | + | chr5_4:46753490-46753509 | None:intergenic | 35.0% | |
GTTGAATTGCGAAGTTAAGT+TGG | + | chr5_4:46753719-46753738 | None:intergenic | 35.0% | |
!! | CGGGTTTTGACATAATTTTG+CGG | + | chr5_4:46753747-46753766 | None:intergenic | 35.0% |
CAGAAAACACGTTTGAACTT+TGG | + | chr5_4:46753793-46753812 | None:intergenic | 35.0% | |
CTAAACTGAAGGGAATTGAA+AGG | - | chr5_4:46753849-46753868 | Msa0854320:intron | 35.0% | |
!! | GTATCTTTTGCTGTGTAGTT+TGG | + | chr5_4:46753905-46753924 | None:intergenic | 35.0% |
GGTATGAATTGCTAAGTTGT+TGG | + | chr5_4:46753950-46753969 | None:intergenic | 35.0% | |
ATACCTCAGTCTTTGATTCT+TGG | - | chr5_4:46753965-46753984 | Msa0854320:intron | 35.0% | |
GTACTTAGAAGCTTCAAATG+GGG | + | chr5_4:46754053-46754072 | None:intergenic | 35.0% | |
GGTACTTAGAAGCTTCAAAT+GGG | + | chr5_4:46754054-46754073 | None:intergenic | 35.0% | |
TGGTACTTAGAAGCTTCAAA+TGG | + | chr5_4:46754055-46754074 | None:intergenic | 35.0% | |
AACATGGAATTTGGGGATAA+AGG | - | chr5_4:46754206-46754225 | Msa0854320:intron | 35.0% | |
! | TAAAGGTATGATTCAGCTGA+TGG | - | chr5_4:46754223-46754242 | Msa0854320:intron | 35.0% |
!! | TTTTAGAAGCTTGGAGAAAG+TGG | - | chr5_4:46754425-46754444 | Msa0854320:intron | 35.0% |
TTTAGAAGCTTGGAGAAAGT+GGG | - | chr5_4:46754426-46754445 | Msa0854320:intron | 35.0% | |
! | GAAGGGCAATTTGGTAATTT+GGG | + | chr5_4:46754488-46754507 | None:intergenic | 35.0% |
! | TGAAGGGCAATTTGGTAATT+TGG | + | chr5_4:46754489-46754508 | None:intergenic | 35.0% |
AATTACCAAATTGCCCTTCA+AGG | - | chr5_4:46754489-46754508 | Msa0854320:intron | 35.0% | |
ATTACCAAATTGCCCTTCAA+GGG | - | chr5_4:46754490-46754509 | Msa0854320:intron | 35.0% | |
! | ATTGTGTCTTTTCCCTTGAA+GGG | + | chr5_4:46754505-46754524 | None:intergenic | 35.0% |
! | AATTGTGTCTTTTCCCTTGA+AGG | + | chr5_4:46754506-46754525 | None:intergenic | 35.0% |
AACGGACATGAGAAATTAAG+TGG | + | chr5_4:46754548-46754567 | None:intergenic | 35.0% | |
ACTTAATTTCTCATGTCCGT+TGG | - | chr5_4:46754547-46754566 | Msa0854320:intron | 35.0% | |
AAAATTACGCGGGATATTAC+AGG | - | chr5_4:46754676-46754695 | Msa0854320:intron | 35.0% | |
AACAACGACAATTTCTCGAT+TGG | + | chr5_4:46754791-46754810 | None:intergenic | 35.0% | |
! | TAGGGTTTTGCACTCAATTA+GGG | + | chr5_4:46754861-46754880 | None:intergenic | 35.0% |
AACGCAATATACCAGAACTA+GGG | + | chr5_4:46754879-46754898 | None:intergenic | 35.0% | |
AAACGCAATATACCAGAACT+AGG | + | chr5_4:46754880-46754899 | None:intergenic | 35.0% | |
! | ATTGCGTTTAATTCTGGTTG+CGG | - | chr5_4:46754891-46754910 | Msa0854320:intron | 35.0% |
AGGTTTATCTTTGGCCATTA+TGG | + | chr5_4:46754963-46754982 | None:intergenic | 35.0% | |
TAAGTCGTGTCTCTATTAGA+AGG | + | chr5_4:46755238-46755257 | None:intergenic | 35.0% | |
TAAGTGTATTGCAGAACAGT+TGG | - | chr5_4:46755596-46755615 | Msa0854320:intron | 35.0% | |
AAGTGTATTGCAGAACAGTT+GGG | - | chr5_4:46755597-46755616 | Msa0854320:intron | 35.0% | |
! | AAGACGAATGATGGAAACAA+AGG | - | chr5_4:46755703-46755722 | Msa0854320:intron | 35.0% |
GAAACAAGGAAATCACCAAT+TGG | - | chr5_4:46755730-46755749 | Msa0854320:intron | 35.0% | |
TCATGATCATGATCATACCA+AGG | + | chr5_4:46747745-46747764 | None:intergenic | 35.0% | |
TAAGGTCATGCCAATGTTAT+AGG | + | chr5_4:46755977-46755996 | None:intergenic | 35.0% | |
! | GCATTCAAGTACCATCTTTT+AGG | - | chr5_4:46748020-46748039 | Msa0854320:intron | 35.0% |
! | TGCCAAATATTTTTCCGATC+AGG | - | chr5_4:46756226-46756245 | Msa0854320:intron | 35.0% |
!!! | CAAAAAGAGCACGAGTTTTT+TGG | + | chr5_4:46756367-46756386 | None:intergenic | 35.0% |
!! | TCACATCATGTTGATTCTAG+TGG | + | chr5_4:46756415-46756434 | None:intergenic | 35.0% |
CAATGGGAAAGAACAGTAAA+AGG | + | chr5_4:46756461-46756480 | None:intergenic | 35.0% | |
TAGAGCAAATGTTGGACAAT+GGG | + | chr5_4:46748482-46748501 | None:intergenic | 35.0% | |
ATAGAGCAAATGTTGGACAA+TGG | + | chr5_4:46748483-46748502 | None:intergenic | 35.0% | |
ACAAACGATAGAGCAAATGT+TGG | + | chr5_4:46756485-46756504 | None:intergenic | 35.0% | |
! | TCTCATGTTTTCCCATTTGT+AGG | - | chr5_4:46756505-46756524 | Msa0854320:intron | 35.0% |
TCTGAACCTGACAAAATGAA+CGG | + | chr5_4:46748556-46748575 | None:intergenic | 35.0% | |
AGCTGATATTGCTCTGATAA+TGG | + | chr5_4:46756620-46756639 | None:intergenic | 35.0% | |
TTTCTCTTGGAACTTGTCAT+TGG | + | chr5_4:46756725-46756744 | None:intergenic | 35.0% | |
TTCCAAGAGAAAGAAATTGC+TGG | - | chr5_4:46756733-46756752 | Msa0854320:intron | 35.0% | |
ATCCAGCAATTTCTTTCTCT+TGG | + | chr5_4:46756738-46756757 | None:intergenic | 35.0% | |
! | GCTGGATGAATTTTACAAAG+AGG | - | chr5_4:46756751-46756770 | Msa0854320:intron | 35.0% |
TCCATGGAAGAGAAATTCAT+TGG | - | chr5_4:46756812-46756831 | Msa0854320:intron | 35.0% | |
TCCAATGAATTTCTCTTCCA+TGG | + | chr5_4:46756816-46756835 | None:intergenic | 35.0% | |
AACAACGAATATCCTATGCA+CGG | - | chr5_4:46756997-46757016 | Msa0854320:five_prime_UTR | 35.0% | |
!!! | TGATTTTGATTACCGTGCAT+AGG | + | chr5_4:46757012-46757031 | None:intergenic | 35.0% |
TTCATTGTAGATGGTGCTTC+AGG | + | chr5_4:46747511-46747530 | None:intergenic | 40.0% | |
CTTTGAGTCGGTATTCAAGA+CGG | + | chr5_4:46747659-46747678 | None:intergenic | 40.0% | |
TATTGAGGAACAAGTCAGGT+CGG | + | chr5_4:46747829-46747848 | None:intergenic | 40.0% | |
ACTTCGGAAGAAGATATCAG+AGG | + | chr5_4:46747902-46747921 | None:intergenic | 40.0% | |
ATCACCAAGAAAGGGAGATT+AGG | + | chr5_4:46748121-46748140 | None:intergenic | 40.0% | |
! | GCAACAAACAAAAAGAGCAC+GGG | + | chr5_4:46748377-46748396 | None:intergenic | 40.0% |
GACAAAATGAATGGTTCGTC+TGG | + | chr5_4:46748547-46748566 | None:intergenic | 40.0% | |
! | GACGAACCATTCATTTTGTC+AGG | - | chr5_4:46748547-46748566 | Msa0854320:intron | 40.0% |
!! | GATAATGGAGTTACTTCACG+AGG | + | chr5_4:46748610-46748629 | None:intergenic | 40.0% |
TCTCTATGACGAGGTGATAA+TGG | + | chr5_4:46748625-46748644 | None:intergenic | 40.0% | |
CATAGAGACCTAACTGATCT+TGG | - | chr5_4:46748637-46748656 | Msa0854320:intron | 40.0% | |
AACACATCATACCCTCACAA+CGG | + | chr5_4:46748812-46748831 | None:intergenic | 40.0% | |
CATGCTTAAACATGTCTGTC+AGG | + | chr5_4:46749086-46749105 | None:intergenic | 40.0% | |
AAGGCCTCAAACTAAGTTGT+GGG | + | chr5_4:46749301-46749320 | None:intergenic | 40.0% | |
CAGGAACACGAGATAAAAAC+CGG | + | chr5_4:46749445-46749464 | None:intergenic | 40.0% | |
ATCCAATTGACACCTGTAAC+CGG | + | chr5_4:46749492-46749511 | None:intergenic | 40.0% | |
GTTACAGGTGTCAATTGGAT+TGG | - | chr5_4:46749492-46749511 | Msa0854320:intron | 40.0% | |
! | AATTGGATTGGGCATAGGAT+TGG | - | chr5_4:46749504-46749523 | Msa0854320:intron | 40.0% |
! | GTGTCTTGCATGACACTTTT+CGG | + | chr5_4:46749670-46749689 | None:intergenic | 40.0% |
TTAATTGGAGTGTACAAGCG+AGG | - | chr5_4:46750085-46750104 | Msa0854320:intron | 40.0% | |
TAATTGGAGTGTACAAGCGA+GGG | - | chr5_4:46750086-46750105 | Msa0854320:intron | 40.0% | |
ATCAGAAGACACATCTGCTA+TGG | - | chr5_4:46750494-46750513 | Msa0854320:intron | 40.0% | |
ATGTCAAACTAGGTAGTCTC+TGG | - | chr5_4:46750726-46750745 | Msa0854320:intron | 40.0% | |
TGTCAAACTAGGTAGTCTCT+GGG | - | chr5_4:46750727-46750746 | Msa0854320:intron | 40.0% | |
TTAGTACCAGGGTCTGATTT+GGG | - | chr5_4:46750927-46750946 | Msa0854320:intron | 40.0% | |
ATTTGGGCTCATATCAGAAG+TGG | - | chr5_4:46750943-46750962 | Msa0854320:intron | 40.0% | |
!!! | CTTTTTCTGGTTATAGGCTC+AGG | - | chr5_4:46750966-46750985 | Msa0854320:intron | 40.0% |
! | AAATCCTTGTGGTCAAGTTG+TGG | - | chr5_4:46751146-46751165 | Msa0854320:intron | 40.0% |
! | AGTTGTGGTGATGAAAGCTT+AGG | - | chr5_4:46751161-46751180 | Msa0854320:intron | 40.0% |
GCATGCTCGAGAATTTAGTA+GGG | - | chr5_4:46751197-46751216 | Msa0854320:intron | 40.0% | |
TCGAGAATTTAGTAGGGCTA+TGG | - | chr5_4:46751203-46751222 | Msa0854320:intron | 40.0% | |
CCATTGTTAACACAACACAG+TGG | + | chr5_4:46751614-46751633 | None:intergenic | 40.0% | |
CCACTGTGTTGTGTTAACAA+TGG | - | chr5_4:46751611-46751630 | Msa0854320:intron | 40.0% | |
CTGTGTTGTGTTAACAATGG+GGG | - | chr5_4:46751614-46751633 | Msa0854320:intron | 40.0% | |
TGTGTTGTGTTAACAATGGG+GGG | - | chr5_4:46751615-46751634 | Msa0854320:intron | 40.0% | |
TGTTAACAATGGGGGGAATA+TGG | - | chr5_4:46751622-46751641 | Msa0854320:intron | 40.0% | |
GTTAACAATGGGGGGAATAT+GGG | - | chr5_4:46751623-46751642 | Msa0854320:intron | 40.0% | |
TAGGGAATTAGGGCAAAGTA+GGG | + | chr5_4:46752337-46752356 | None:intergenic | 40.0% | |
GGGAAAAAAGCTAGGGAATT+AGG | + | chr5_4:46752348-46752367 | None:intergenic | 40.0% | |
!!! | GTTTTGGAGGGAAAAAAGCT+AGG | + | chr5_4:46752356-46752375 | None:intergenic | 40.0% |
GATGTGATCAAGTGCTTGAA+CGG | + | chr5_4:46752406-46752425 | None:intergenic | 40.0% | |
!! | GAATGTTGACCGACTTGATT+AGG | + | chr5_4:46752491-46752510 | None:intergenic | 40.0% |
TACTATGAACCGTACGTCAT+AGG | - | chr5_4:46752620-46752639 | Msa0854320:intron | 40.0% | |
TAATGTAGCCTATGACGTAC+GGG | + | chr5_4:46752631-46752650 | None:intergenic | 40.0% | |
TAATGTAGCCTATGACGTAC+GGG | + | chr5_4:46752631-46752650 | None:intergenic | 40.0% | |
TACTATGACTCGTACGTCAT+AGG | - | chr5_4:46752779-46752798 | Msa0854320:intron | 40.0% | |
TAATGTAGCCTATGACGTAC+GGG | + | chr5_4:46752631-46752650 | None:intergenic | 40.0% | |
TAATGTAGCCTATGACGTAC+GGG | + | chr5_4:46752631-46752650 | None:intergenic | 40.0% | |
GGAACTCACCAATACATCTT+TGG | - | chr5_4:46753390-46753409 | Msa0854320:intron | 40.0% | |
TGAAGTGGCCAAAGATGTAT+TGG | + | chr5_4:46753401-46753420 | None:intergenic | 40.0% | |
ATCAGCTCAAGCATCAACAA+AGG | - | chr5_4:46753421-46753440 | Msa0854320:intron | 40.0% | |
TGGCAGAAGTGATGAGATTA+TGG | + | chr5_4:46753540-46753559 | None:intergenic | 40.0% | |
TCCTGACAGATTTCCCAAAA+CGG | - | chr5_4:46753585-46753604 | Msa0854320:intron | 40.0% | |
!! | AGCTGCAAATAAGCCGTTTT+GGG | + | chr5_4:46753601-46753620 | None:intergenic | 40.0% |
! | AAGCTGCAAATAAGCCGTTT+TGG | + | chr5_4:46753602-46753621 | None:intergenic | 40.0% |
!! | GAATTGCGAAGTTAAGTTGG+TGG | + | chr5_4:46753716-46753735 | None:intergenic | 40.0% |
ATCCTGCTGAAAGTCACTTA+CGG | + | chr5_4:46753767-46753786 | None:intergenic | 40.0% | |
TAAGTTGTTGGGACATGTTC+TGG | + | chr5_4:46753938-46753957 | None:intergenic | 40.0% | |
GAACCAAGAATCAAAGACTG+AGG | + | chr5_4:46753971-46753990 | None:intergenic | 40.0% | |
GGTTCACAAGGAACAAATGA+TGG | + | chr5_4:46754125-46754144 | None:intergenic | 40.0% | |
TATATGACACAAGCAAGCCA+TGG | + | chr5_4:46754265-46754284 | None:intergenic | 40.0% | |
!! | CGATTTTAGTGAGGATTGAG+TGG | - | chr5_4:46754320-46754339 | Msa0854320:intron | 40.0% |
! | TTTTCCCTTGAAGGGCAATT+TGG | + | chr5_4:46754497-46754516 | None:intergenic | 40.0% |
AAGTGGTTATGAATTAGCGG+AGG | + | chr5_4:46754531-46754550 | None:intergenic | 40.0% | |
! | CTAGGGTTTTGCACTCAATT+AGG | + | chr5_4:46754862-46754881 | None:intergenic | 40.0% |
TAAGTGTATTGCCCATCAGT+TGG | - | chr5_4:46755319-46755338 | Msa0854320:intron | 40.0% | |
AAGTGTATTGCCCATCAGTT+GGG | - | chr5_4:46755320-46755339 | Msa0854320:intron | 40.0% | |
AACTAAGTAAGAGACGAGTG+CGG | + | chr5_4:46755377-46755396 | None:intergenic | 40.0% | |
! | ATGCGCTTCTTTGACTTCAT+AGG | + | chr5_4:46755420-46755439 | None:intergenic | 40.0% |
AAGAAGCTCAAGACGAATGA+TGG | - | chr5_4:46755694-46755713 | Msa0854320:intron | 40.0% | |
TCATCTTGGAATGAGGCTTT+GGG | + | chr5_4:46755757-46755776 | None:intergenic | 40.0% | |
ATCATCTTGGAATGAGGCTT+TGG | + | chr5_4:46755758-46755777 | None:intergenic | 40.0% | |
AGGATCATCATCTTGGAATG+AGG | + | chr5_4:46755764-46755783 | None:intergenic | 40.0% | |
CATTCCAAGATGATGATCCT+TGG | - | chr5_4:46755764-46755783 | Msa0854320:intron | 40.0% | |
CATACCAAGGATCATCATCT+TGG | + | chr5_4:46755771-46755790 | None:intergenic | 40.0% | |
CAAATACTGAGGAACAAGTC+AGG | + | chr5_4:46755872-46755891 | None:intergenic | 40.0% | |
TTGACGACTGCCTATAACAT+TGG | - | chr5_4:46755964-46755983 | Msa0854320:intron | 40.0% | |
! | GATTGAAGCGACATCGATTA+AGG | + | chr5_4:46755995-46756014 | None:intergenic | 40.0% |
TATTCCTAATCTCCCACTCT+TGG | - | chr5_4:46756135-46756154 | Msa0854320:intron | 40.0% | |
TGTAGAACACAGTACCTGAT+CGG | + | chr5_4:46748244-46748263 | None:intergenic | 40.0% | |
ACAAAATGAACGGTTCGTCT+GGG | + | chr5_4:46756541-46756560 | None:intergenic | 40.0% | |
!! | GATAATGGAGTTACTTCACG+AGG | + | chr5_4:46748610-46748629 | None:intergenic | 40.0% |
TTGGGTCCAATGATGATCTT+GGG | - | chr5_4:46756690-46756709 | Msa0854320:intron | 40.0% | |
AATGATGATCTTGGGGATCA+GGG | - | chr5_4:46756698-46756717 | Msa0854320:intron | 40.0% | |
CTCTGATCAGTACAAATCCA+TGG | - | chr5_4:46756796-46756815 | Msa0854320:intron | 40.0% | |
ACATGTCATGTGCAATGCAT+GGG | + | chr5_4:46756951-46756970 | None:intergenic | 40.0% | |
AGGCAGCCGTCAATTAACTT+CGG | + | chr5_4:46747918-46747937 | None:intergenic | 45.0% | |
GTGTGTGTGTGTGTGTGTAT+TGG | - | chr5_4:46747998-46748017 | Msa0854320:CDS | 45.0% | |
!! | GCACACCATGTTGATTCTAG+TGG | + | chr5_4:46748417-46748436 | None:intergenic | 45.0% |
TGATTGCGGAACCTACAAAC+GGG | + | chr5_4:46748524-46748543 | None:intergenic | 45.0% | |
GTGATTGCGGAACCTACAAA+CGG | + | chr5_4:46748525-46748544 | None:intergenic | 45.0% | |
AATGGTTCGTCTGGTGATTG+CGG | + | chr5_4:46748538-46748557 | None:intergenic | 45.0% | |
ATGGAGTTACTTCACGAGGA+GGG | + | chr5_4:46748606-46748625 | None:intergenic | 45.0% | |
AATGGAGTTACTTCACGAGG+AGG | + | chr5_4:46748607-46748626 | None:intergenic | 45.0% | |
TCAGTTAGGTCTCTATGACG+AGG | + | chr5_4:46748634-46748653 | None:intergenic | 45.0% | |
CATTGGACCCAAGATCAGTT+AGG | + | chr5_4:46748648-46748667 | None:intergenic | 45.0% | |
CGAAGAGGTTGAGATTGTAC+TGG | - | chr5_4:46748741-46748760 | Msa0854320:CDS | 45.0% | |
! | AGATTGTACTGGCCTCTGAA+TGG | - | chr5_4:46748752-46748771 | Msa0854320:CDS | 45.0% |
CATGGATTTGCACCATTCAG+AGG | + | chr5_4:46748767-46748786 | None:intergenic | 45.0% | |
CTCTGAATGGTGCAAATCCA+TGG | - | chr5_4:46748765-46748784 | Msa0854320:CDS | 45.0% | |
ACACATCATACCCTCACAAC+GGG | + | chr5_4:46748811-46748830 | None:intergenic | 45.0% | |
GCGATGTGAACGAAACAAAG+AGG | + | chr5_4:46749022-46749041 | None:intergenic | 45.0% | |
TCCACATCATGAAGTGAAGG+AGG | + | chr5_4:46749044-46749063 | None:intergenic | 45.0% | |
GAAGGCCTCAAACTAAGTTG+TGG | + | chr5_4:46749302-46749321 | None:intergenic | 45.0% | |
! | GTTTGAGGCCTTCAATTGTG+AGG | - | chr5_4:46749309-46749328 | Msa0854320:intron | 45.0% |
! | CGAATTGGCCTCACAATTGA+AGG | + | chr5_4:46749320-46749339 | None:intergenic | 45.0% |
TCCGGTTGAACTTGTGTAAC+TGG | - | chr5_4:46749408-46749427 | Msa0854320:intron | 45.0% | |
GCCAGTTACACAAGTTCAAC+CGG | + | chr5_4:46749412-46749431 | None:intergenic | 45.0% | |
GAACACGAGATAAAAACCGG+CGG | + | chr5_4:46749442-46749461 | None:intergenic | 45.0% | |
!! | TATCTGGTTCTATCACAGGC+CGG | - | chr5_4:46749470-46749489 | Msa0854320:intron | 45.0% |
! | GTGTCAATTGGATTGGGCAT+AGG | - | chr5_4:46749499-46749518 | Msa0854320:intron | 45.0% |
!! | AGGATTGGTTCCAGGTTGAA+TGG | - | chr5_4:46749519-46749538 | Msa0854320:intron | 45.0% |
GAAGACACATCTGCTATGGT+TGG | - | chr5_4:46750498-46750517 | Msa0854320:intron | 45.0% | |
AGAAGCGAGAAACTCTTGCT+TGG | - | chr5_4:46750584-46750603 | Msa0854320:intron | 45.0% | |
! | CTCTTGCTTGGTGGTTCAAT+AGG | - | chr5_4:46750596-46750615 | Msa0854320:intron | 45.0% |
GTTAGTACCAGGGTCTGATT+TGG | - | chr5_4:46750926-46750945 | Msa0854320:intron | 45.0% | |
!! | TTTCTGGTTATAGGCTCAGG+AGG | - | chr5_4:46750969-46750988 | Msa0854320:intron | 45.0% |
ATCACCACAACTTGACCACA+AGG | + | chr5_4:46751153-46751172 | None:intergenic | 45.0% | |
! | TGTGGTGATGAAAGCTTAGG+AGG | - | chr5_4:46751164-46751183 | Msa0854320:intron | 45.0% |
AAGCTTAGGAGGCTAAGCAA+TGG | - | chr5_4:46751175-46751194 | Msa0854320:intron | 45.0% | |
GGCATGCTCGAGAATTTAGT+AGG | - | chr5_4:46751196-46751215 | Msa0854320:intron | 45.0% | |
ACAACACAGTGGCTCCTTAA+AGG | + | chr5_4:46751603-46751622 | None:intergenic | 45.0% | |
CATTTGGTTATCATCCCCCT+AGG | + | chr5_4:46751651-46751670 | None:intergenic | 45.0% | |
AGATCTTCAACCCATGCGAA+CGG | - | chr5_4:46751863-46751882 | Msa0854320:intron | 45.0% | |
CTAGGGAATTAGGGCAAAGT+AGG | + | chr5_4:46752338-46752357 | None:intergenic | 45.0% | |
TACTATGACCCGTACGTCAT+AGG | - | chr5_4:46752673-46752692 | Msa0854320:intron | 45.0% | |
TACTATGACCCGTACGTCAT+AGG | - | chr5_4:46752673-46752692 | Msa0854320:intron | 45.0% | |
TACTATGACCCGTACGTCAT+AGG | - | chr5_4:46752673-46752692 | Msa0854320:intron | 45.0% | |
TACTATGACCCGTACGTCAT+AGG | - | chr5_4:46752673-46752692 | Msa0854320:intron | 45.0% | |
GATGCTTGAGCTGATTGAAG+TGG | + | chr5_4:46753416-46753435 | None:intergenic | 45.0% | |
TCCTGCTGAAAGTCACTTAC+GGG | + | chr5_4:46753766-46753785 | None:intergenic | 45.0% | |
TAGCTACACTTCTATCACGC+AGG | - | chr5_4:46754020-46754039 | Msa0854320:intron | 45.0% | |
!! | CTTGTGAGCTTTGAGCTTGA+GGG | + | chr5_4:46754158-46754177 | None:intergenic | 45.0% |
AGGTATGATTCAGCTGATGG+AGG | - | chr5_4:46754226-46754245 | Msa0854320:intron | 45.0% | |
GGTATGATTCAGCTGATGGA+GGG | - | chr5_4:46754227-46754246 | Msa0854320:intron | 45.0% | |
GGATTGAGTGGAAGAAGCAA+TGG | - | chr5_4:46754332-46754351 | Msa0854320:intron | 45.0% | |
TGGAAGAAGCAATGGAGAGA+AGG | - | chr5_4:46754340-46754359 | Msa0854320:intron | 45.0% | |
AGAAGCAATGGAGAGAAGGA+AGG | - | chr5_4:46754344-46754363 | Msa0854320:intron | 45.0% | |
GGAGAGAAGGAAGGATGATA+AGG | - | chr5_4:46754353-46754372 | Msa0854320:intron | 45.0% | |
TGAGTGCAAAACCCTAGTTC+TGG | - | chr5_4:46754865-46754884 | Msa0854320:intron | 45.0% | |
GCTGAAGATGAGCATGATCA+TGG | - | chr5_4:46755296-46755315 | Msa0854320:intron | 45.0% | |
TATTGCCCATCAGTTGGGTT+GGG | - | chr5_4:46755325-46755344 | Msa0854320:intron | 45.0% | |
TGTATCCCAACCCAACTGAT+GGG | + | chr5_4:46755333-46755352 | None:intergenic | 45.0% | |
TTGTATCCCAACCCAACTGA+TGG | + | chr5_4:46755334-46755353 | None:intergenic | 45.0% | |
ACCTGAAGAAGACGAACTCT+TGG | - | chr5_4:46755557-46755576 | Msa0854320:intron | 45.0% | |
TCCAAGAGTTCGTCTTCTTC+AGG | + | chr5_4:46755561-46755580 | None:intergenic | 45.0% | |
!! | AATGAGGCTTTGGGTCCAAT+TGG | + | chr5_4:46755748-46755767 | None:intergenic | 45.0% |
GGCTTACAATACGCTGGTAT+CGG | + | chr5_4:46755847-46755866 | None:intergenic | 45.0% | |
TACTGAGGAACAAGTCAGGT+TGG | + | chr5_4:46755868-46755887 | None:intergenic | 45.0% | |
AGGCAGTCGTCAATGAACTT+CGG | + | chr5_4:46755957-46755976 | None:intergenic | 45.0% | |
ATCACCAAGAGTGGGAGATT+AGG | + | chr5_4:46756142-46756161 | None:intergenic | 45.0% | |
GGATTGCGGAACCTACAAAT+GGG | + | chr5_4:46756519-46756538 | None:intergenic | 45.0% | |
CAAAATGAACGGTTCGTCTG+GGG | + | chr5_4:46756540-46756559 | None:intergenic | 45.0% | |
GACAAAATGAACGGTTCGTC+TGG | + | chr5_4:46756542-46756561 | None:intergenic | 45.0% | |
! | GACGAACCGTTCATTTTGTC+AGG | - | chr5_4:46756542-46756561 | Msa0854320:intron | 45.0% |
ATGGAGTTACTTCACGAGGA+GGG | + | chr5_4:46748606-46748625 | None:intergenic | 45.0% | |
AATGGAGTTACTTCACGAGG+AGG | + | chr5_4:46748607-46748626 | None:intergenic | 45.0% | |
ACCTTCTCGTAGAGACCTAA+CGG | - | chr5_4:46756664-46756683 | Msa0854320:intron | 45.0% | |
! | GTAGAGACCTAACGGATCTT+GGG | - | chr5_4:46756672-46756691 | Msa0854320:intron | 45.0% |
CTTGGGTCCAATGATGATCT+TGG | - | chr5_4:46756689-46756708 | Msa0854320:intron | 45.0% | |
TGGGTCCAATGATGATCTTG+GGG | - | chr5_4:46756691-46756710 | Msa0854320:intron | 45.0% | |
CTGATCCCCAAGATCATCAT+TGG | + | chr5_4:46756699-46756718 | None:intergenic | 45.0% | |
CAATGATGATCTTGGGGATC+AGG | - | chr5_4:46756697-46756716 | Msa0854320:intron | 45.0% | |
CAAAGAGGCTGAGATTGAGA+TGG | - | chr5_4:46756766-46756785 | Msa0854320:intron | 45.0% | |
! | GCATGGGTTAACACACTAGT+TGG | + | chr5_4:46756935-46756954 | None:intergenic | 45.0% |
GACATGTCATGTGCAATGCA+TGG | + | chr5_4:46756952-46756971 | None:intergenic | 45.0% | |
!! | TAAAATTAAATAGTATATAA+TGG | + | chr5_4:46748313-46748332 | None:intergenic | 5.0% |
!! | TAAAATTAAATAGTATATAA+TGG | + | chr5_4:46748313-46748332 | None:intergenic | 5.0% |
! | CAGGTCGGCTTACAATACGA+TGG | + | chr5_4:46747814-46747833 | None:intergenic | 50.0% |
TTGACGGCTGCCTGTAACAT+TGG | - | chr5_4:46747925-46747944 | Msa0854320:CDS | 50.0% | |
TTACTTCACGAGGAGGGGTA+TGG | + | chr5_4:46748600-46748619 | None:intergenic | 50.0% | |
TGGAGTTACTTCACGAGGAG+GGG | + | chr5_4:46748605-46748624 | None:intergenic | 50.0% | |
!! | TCTTTGAAGTGCCCGTTGTG+AGG | - | chr5_4:46748797-46748816 | Msa0854320:CDS | 50.0% |
!! | CTTTGAAGTGCCCGTTGTGA+GGG | - | chr5_4:46748798-46748817 | Msa0854320:CDS | 50.0% |
GCCTCCTTCACTTCATGATG+TGG | - | chr5_4:46749040-46749059 | Msa0854320:CDS | 50.0% | |
! | GGTGCCCACAACTTAGTTTG+AGG | - | chr5_4:46749294-46749313 | Msa0854320:intron | 50.0% |
TTCTATCACAGGCCGGTTAC+AGG | - | chr5_4:46749477-46749496 | Msa0854320:intron | 50.0% | |
!! | TTGGGCATAGGATTGGTTCC+AGG | - | chr5_4:46749511-46749530 | Msa0854320:intron | 50.0% |
AGCGAGAAACTCTTGCTTGG+TGG | - | chr5_4:46750587-46750606 | Msa0854320:intron | 50.0% | |
TATGAGCCCAAATCAGACCC+TGG | + | chr5_4:46750936-46750955 | None:intergenic | 50.0% | |
GATCTTCAACCCATGCGAAC+GGG | - | chr5_4:46751864-46751883 | Msa0854320:intron | 50.0% | |
TATAAACGGCCCGTTCGCAT+GGG | + | chr5_4:46751876-46751895 | None:intergenic | 50.0% | |
GGGCAAAGTAGGGAGGATTA+GGG | + | chr5_4:46752327-46752346 | None:intergenic | 50.0% | |
AGGGCAAAGTAGGGAGGATT+AGG | + | chr5_4:46752328-46752347 | None:intergenic | 50.0% | |
GGAATTAGGGCAAAGTAGGG+AGG | + | chr5_4:46752334-46752353 | None:intergenic | 50.0% | |
!!! | GCCGTTTTGGGAAATCTGTC+AGG | + | chr5_4:46753589-46753608 | None:intergenic | 50.0% |
ACCCGTAAGTGACTTTCAGC+AGG | - | chr5_4:46753762-46753781 | Msa0854320:intron | 50.0% | |
!! | GCTTGTGAGCTTTGAGCTTG+AGG | + | chr5_4:46754159-46754178 | None:intergenic | 50.0% |
GAGGGAGAAGAGGAAATCCA+TGG | - | chr5_4:46754245-46754264 | Msa0854320:intron | 50.0% | |
GGATGATAAGGACGAGAGAG+AGG | - | chr5_4:46754365-46754384 | Msa0854320:intron | 50.0% | |
GTATTGCCCATCAGTTGGGT+TGG | - | chr5_4:46755324-46755343 | Msa0854320:intron | 50.0% | |
!! | CAGGTTGGCTTACAATACGC+TGG | + | chr5_4:46755853-46755872 | None:intergenic | 50.0% |
GTGTGTGTGTGTGTGTGTGT+TGG | - | chr5_4:46747992-46748011 | Msa0854320:CDS | 50.0% | |
GGGATTGCGGAACCTACAAA+TGG | + | chr5_4:46756520-46756539 | None:intergenic | 50.0% | |
TTACTTCACGAGGAGGGGTA+TGG | + | chr5_4:46748600-46748619 | None:intergenic | 50.0% | |
TGGAGTTACTTCACGAGGAG+GGG | + | chr5_4:46748605-46748624 | None:intergenic | 50.0% | |
TCCGTTAGGTCTCTACGAGA+AGG | + | chr5_4:46756668-46756687 | None:intergenic | 50.0% | |
! | CGTAGAGACCTAACGGATCT+TGG | - | chr5_4:46756671-46756690 | Msa0854320:intron | 50.0% |
CATTGGACCCAAGATCCGTT+AGG | + | chr5_4:46756682-46756701 | None:intergenic | 50.0% | |
GGCTGAGATTGAGATGGAAC+TGG | - | chr5_4:46756772-46756791 | Msa0854320:intron | 50.0% | |
AACACTTCATACCCTCGCAG+CGG | + | chr5_4:46756843-46756862 | None:intergenic | 50.0% | |
! | TCACGAGGAGGGGTATGGAA+TGG | + | chr5_4:46748595-46748614 | None:intergenic | 55.0% |
AAGACCAGGTGCGGCATCAT+TGG | + | chr5_4:46748665-46748684 | None:intergenic | 55.0% | |
AATGATGCCGCACCTGGTCT+TGG | - | chr5_4:46748664-46748683 | Msa0854320:intron | 55.0% | |
! | ATGATGCCGCACCTGGTCTT+GGG | - | chr5_4:46748665-46748684 | Msa0854320:intron | 55.0% |
GGCCGGTTACAGGTGTCAAT+TGG | - | chr5_4:46749487-46749506 | Msa0854320:intron | 55.0% | |
! | TCCAGGTTGAATGGCCTGTC+CGG | - | chr5_4:46749528-46749547 | Msa0854320:intron | 55.0% |
AAGCGAGGGCAAGGCAGAAT+AGG | - | chr5_4:46750100-46750119 | Msa0854320:intron | 55.0% | |
GTATAAACGGCCCGTTCGCA+TGG | + | chr5_4:46751877-46751896 | None:intergenic | 55.0% | |
!! | GGTGCTGTTGTGGGTTCACA+AGG | + | chr5_4:46754137-46754156 | None:intergenic | 55.0% |
!! | GAGCTTGAGGGTGCTGTTGT+GGG | + | chr5_4:46754146-46754165 | None:intergenic | 55.0% |
!! | TGAGCTTGAGGGTGCTGTTG+TGG | + | chr5_4:46754147-46754166 | None:intergenic | 55.0% |
TCAGCTGATGGAGGGAGAAG+AGG | - | chr5_4:46754235-46754254 | Msa0854320:intron | 55.0% | |
AACGGTTCGTCTGGGGATTG+CGG | + | chr5_4:46756533-46756552 | None:intergenic | 55.0% | |
! | TCACGAGGAGGGGTATGGAA+TGG | + | chr5_4:46748595-46748614 | None:intergenic | 55.0% |
ACACTTCATACCCTCGCAGC+GGG | + | chr5_4:46756842-46756861 | None:intergenic | 55.0% | |
!! | TGATGCCGCACCTGGTCTTG+GGG | - | chr5_4:46748666-46748685 | Msa0854320:intron | 60.0% |
! | GTAACTGGCTCAACAGCCGC+CGG | - | chr5_4:46749423-46749442 | Msa0854320:intron | 60.0% |
ACCGGACAGGCCATTCAACC+TGG | + | chr5_4:46749532-46749551 | None:intergenic | 60.0% | |
GGAGTGTACAAGCGAGGGCA+AGG | - | chr5_4:46750091-46750110 | Msa0854320:intron | 60.0% | |
TGGGGGGAATATGGGCTCCT+AGG | - | chr5_4:46751631-46751650 | Msa0854320:intron | 60.0% | |
GGGGGGAATATGGGCTCCTA+GGG | - | chr5_4:46751632-46751651 | Msa0854320:intron | 60.0% | |
GGGGGAATATGGGCTCCTAG+GGG | - | chr5_4:46751633-46751652 | Msa0854320:intron | 60.0% | |
GGGGAATATGGGCTCCTAGG+GGG | - | chr5_4:46751634-46751653 | Msa0854320:intron | 60.0% | |
GGGTCCAATGATGCCGCACC+TGG | - | chr5_4:46748658-46748677 | Msa0854320:intron | 65.0% | |
!! | GATGCCGCACCTGGTCTTGG+GGG | - | chr5_4:46748667-46748686 | Msa0854320:intron | 65.0% |
TCATTGGAGAGCCCGCTGCG+AGG | - | chr5_4:46756828-46756847 | Msa0854320:intron | 65.0% | |
CATTGGAGAGCCCGCTGCGA+GGG | - | chr5_4:46756829-46756848 | Msa0854320:intron | 65.0% | |
CCGACCCCCAAGACCAGGTG+CGG | + | chr5_4:46748674-46748693 | None:intergenic | 70.0% | |
!! | CCGCACCTGGTCTTGGGGGT+CGG | - | chr5_4:46748671-46748690 | Msa0854320:intron | 70.0% |
!! | CGCACCTGGTCTTGGGGGTC+GGG | - | chr5_4:46748672-46748691 | Msa0854320:intron | 70.0% |
!! | GCACCTGGTCTTGGGGGTCG+GGG | - | chr5_4:46748673-46748692 | Msa0854320:intron | 70.0% |
GGACCCCGACCCCCAAGACC+AGG | + | chr5_4:46748679-46748698 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 46747504 | 46757049 | 46747504 | ID=Msa0854320;Name=Msa0854320 |
chr5_4 | mRNA | 46747504 | 46757049 | 46747504 | ID=Msa0854320-mRNA-1;Parent=Msa0854320;Name=Msa0854320-mRNA-1;_AED=0.07;_eAED=0.07;_QI=59|1|1|1|0.75|0.6|5|193|227 |
chr5_4 | exon | 46747504 | 46748026 | 46747504 | ID=Msa0854320-mRNA-1:exon:14804;Parent=Msa0854320-mRNA-1 |
chr5_4 | exon | 46748306 | 46748328 | 46748306 | ID=Msa0854320-mRNA-1:exon:14803;Parent=Msa0854320-mRNA-1 |
chr5_4 | exon | 46748694 | 46748882 | 46748694 | ID=Msa0854320-mRNA-1:exon:14802;Parent=Msa0854320-mRNA-1 |
chr5_4 | exon | 46748959 | 46749085 | 46748959 | ID=Msa0854320-mRNA-1:exon:14801;Parent=Msa0854320-mRNA-1 |
chr5_4 | exon | 46756976 | 46757049 | 46756976 | ID=Msa0854320-mRNA-1:exon:14800;Parent=Msa0854320-mRNA-1 |
chr5_4 | five_prime_UTR | 46756991 | 46757049 | 46756991 | ID=Msa0854320-mRNA-1:five_prime_utr;Parent=Msa0854320-mRNA-1 |
chr5_4 | CDS | 46756976 | 46756990 | 46756976 | ID=Msa0854320-mRNA-1:cds;Parent=Msa0854320-mRNA-1 |
chr5_4 | CDS | 46748959 | 46749085 | 46748959 | ID=Msa0854320-mRNA-1:cds;Parent=Msa0854320-mRNA-1 |
chr5_4 | CDS | 46748694 | 46748882 | 46748694 | ID=Msa0854320-mRNA-1:cds;Parent=Msa0854320-mRNA-1 |
chr5_4 | CDS | 46748306 | 46748328 | 46748306 | ID=Msa0854320-mRNA-1:cds;Parent=Msa0854320-mRNA-1 |
chr5_4 | CDS | 46747697 | 46748026 | 46747697 | ID=Msa0854320-mRNA-1:cds;Parent=Msa0854320-mRNA-1 |
chr5_4 | three_prime_UTR | 46747504 | 46747696 | 46747504 | ID=Msa0854320-mRNA-1:three_prime_utr;Parent=Msa0854320-mRNA-1 |
Gene Sequence |
Protein sequence |