AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0790660


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0790660 MtrunA17_Chr8g0373001 99.029 412 4 0 1 412 1 412 0.0 842
Msa0790660 MtrunA17_Chr5g0404321 73.077 416 108 2 1 412 1 416 0.0 630
Msa0790660 MtrunA17_Chr8g0373361 70.416 409 103 7 1 405 11 405 0.0 546
Msa0790660 MtrunA17_Chr1g0155301 59.028 432 147 7 1 412 1 422 2.50e-174 493
Msa0790660 MtrunA17_Chr8g0373331 59.169 409 98 8 1 403 1 346 1.24e-154 441
Msa0790660 MtrunA17_Chr2g0286441 57.182 369 149 3 46 412 32 393 1.96e-147 424
Msa0790660 MtrunA17_Chr2g0278511 52.093 430 185 8 1 412 1 427 1.70e-145 420
Msa0790660 MtrunA17_Chr1g0201891 50.909 440 179 12 1 412 1 431 2.26e-142 412
Msa0790660 MtrunA17_Chr1g0196071 51.190 420 179 6 1 412 1 402 1.34e-141 409
Msa0790660 MtrunA17_Chr2g0315641 51.667 360 144 2 53 412 42 371 5.45e-125 366
Msa0790660 MtrunA17_Chr8g0373351 52.196 387 73 9 37 409 3 291 3.00e-111 328
Msa0790660 MtrunA17_Chr2g0315651 45.213 376 169 7 41 412 25 367 4.30e-98 297
Msa0790660 MtrunA17_Chr1g0156151 54.673 214 91 2 1 210 1 212 1.89e-71 224
Msa0790660 MtrunA17_Chr8g0373341 59.193 223 47 5 1 205 1 197 1.28e-65 212
Msa0790660 MtrunA17_Chr8g0373341 58.537 123 50 1 281 402 198 320 8.54e-39 142
Msa0790660 MtrunA17_Chr3g0091401 52.475 101 41 2 96 196 9 102 1.82e-26 102
Msa0790660 MtrunA17_Chr2g0334041 27.397 219 130 8 209 411 154 359 2.26e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0790660 AT2G18280.2 62.740 416 128 9 1 412 1 393 1.41e-176 498
Msa0790660 AT2G18280.1 62.740 416 128 9 1 412 1 393 1.41e-176 498
Msa0790660 AT2G47900.3 53.125 416 182 6 1 412 1 407 3.16e-148 427
Msa0790660 AT2G47900.2 53.253 415 182 6 1 412 1 406 6.26e-148 426
Msa0790660 AT2G47900.1 53.253 415 182 6 1 412 1 406 6.26e-148 426
Msa0790660 AT1G47270.3 55.164 426 139 11 1 412 1 388 9.02e-148 425
Msa0790660 AT1G47270.2 55.164 426 139 11 1 412 25 412 1.24e-147 425
Msa0790660 AT1G47270.1 55.164 426 139 11 1 412 26 413 1.58e-147 425
Msa0790660 AT1G25280.1 49.666 449 185 9 1 412 1 445 1.57e-140 409
Msa0790660 AT1G76900.2 48.690 458 186 8 1 412 1 455 2.55e-137 400
Msa0790660 AT1G76900.1 48.690 458 186 8 1 412 1 455 2.55e-137 400
Msa0790660 AT1G76900.3 48.690 458 186 8 1 412 1 455 2.55e-137 400
Msa0790660 AT1G43640.1 46.818 440 195 11 1 412 1 429 1.66e-128 377
Msa0790660 AT1G53320.1 51.515 363 146 4 53 412 44 379 1.56e-122 360
Msa0790660 AT3G06380.1 51.233 365 156 7 53 412 33 380 2.11e-121 357
Msa0790660 AT5G18680.1 50.541 370 162 7 49 412 35 389 7.73e-120 354
Msa0790660 AT1G43640.2 48.518 371 160 8 65 412 1 363 9.00e-116 342
Msa0790660 AT5G18680.2 51.634 306 128 6 112 412 7 297 8.62e-98 294
Msa0790660 AT3G06380.2 50.831 301 127 6 116 412 5 288 1.49e-96 291
Msa0790660 AT1G25280.3 51.493 268 102 5 172 412 1 267 1.05e-83 257
Msa0790660 AT1G25280.2 51.493 268 102 5 172 412 1 267 1.05e-83 257
Msa0790660 AT1G61940.2 54.023 87 40 0 56 142 1 87 5.57e-28 111
Msa0790660 AT1G61940.1 54.098 61 28 0 56 116 1 61 2.45e-16 78.6

Find 138 sgRNAs with CRISPR-Local

Find 215 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAGAGTTATTTGAATTTA+TGG 0.037907 5_3:-1528300 None:intergenic
TGTGGCCCTTCTTATCTTTC+TGG 0.112808 5_3:-1529882 None:intergenic
GTGTTGGTGCCTAAACTTTA+TGG 0.194516 5_3:+1530507 Msa0790660:CDS
ATTACCTGCTTCAATGAAAT+AGG 0.231585 5_3:-1529440 None:intergenic
ATGATGCAGTGCACTCTTCT+TGG 0.233427 5_3:-1530256 None:intergenic
TGTATAAGTTGTATTGATTC+TGG 0.233611 5_3:+1530888 Msa0790660:three_prime_UTR
CTTCACCGCCACCGCGATTC+TGG 0.271168 5_3:-1528239 None:intergenic
TCTACCTCCTGAATTGCTTT+TGG 0.284311 5_3:+1529274 Msa0790660:CDS
TGACCGACATAGCCAATTCT+TGG 0.292823 5_3:-1529189 None:intergenic
ATCTTACAGTTTGGAAAGAT+TGG 0.295811 5_3:+1530622 Msa0790660:CDS
GAGGTAACGATGTTGGGGTT+GGG 0.312924 5_3:-1530321 None:intergenic
TATACCTATCTCAGCTATTC+AGG 0.328559 5_3:+1530285 Msa0790660:CDS
ATCCGATCCAGTGCTTTATT+AGG 0.329707 5_3:+1529573 Msa0790660:CDS
CTCTCATTCACAAGCAGGTT+TGG 0.347646 5_3:-1530725 None:intergenic
CTCGCACTTGGTCGACGATT+AGG 0.349859 5_3:-1530139 None:intergenic
TCCAATTGAACCTATTCAAC+AGG 0.350379 5_3:+1529238 Msa0790660:CDS
ATATTTGAGGTAACGATGTT+GGG 0.363096 5_3:-1530327 None:intergenic
TTTACCAACATATTTGTTGC+TGG 0.366133 5_3:-1529951 None:intergenic
CCAGAGAGCATTTAGCTCAT+AGG 0.369135 5_3:-1530224 None:intergenic
CCCTGTTGAATAGGTTCAAT+TGG 0.369838 5_3:-1529239 None:intergenic
GAAAGGGTAATCTTACAGTT+TGG 0.371540 5_3:+1530613 Msa0790660:CDS
AGGTAACGATGTTGGGGTTG+GGG 0.375686 5_3:-1530320 None:intergenic
ATTATGTCCAAAAGCAATTC+AGG 0.377900 5_3:-1529281 None:intergenic
CTTCGTGTTGTACTTAGGTT+TGG 0.385998 5_3:+1529616 Msa0790660:CDS
CACCGACTTTGTCATATCCT+TGG 0.386843 5_3:+1529907 Msa0790660:CDS
TGTTGGTGCCTAAACTTTAT+GGG 0.388580 5_3:+1530508 Msa0790660:CDS
TTTATTATGTTTATTTATGT+TGG 0.389066 5_3:-1528142 None:intergenic
ATCGAGCCTTGGCTCGGTTC+TGG 0.397446 5_3:-1530433 None:intergenic
CGATTCTGGAGAATCGCGTT+TGG 0.417780 5_3:-1528225 None:intergenic
TGAGGTAACGATGTTGGGGT+TGG 0.418830 5_3:-1530322 None:intergenic
GATTCTGGAGAATCGCGTTT+GGG 0.427715 5_3:-1528224 None:intergenic
CCAGCATGTAACAATCTTGT+TGG 0.440142 5_3:+1530193 Msa0790660:CDS
AACAATAACACTATAGAATA+CGG 0.447248 5_3:-1528407 None:intergenic
TCAAACAGATTGCAAAGGCT+TGG 0.450978 5_3:-1530690 None:intergenic
GTGCTTCGGTATGTAAATCA+TGG 0.451227 5_3:+1529360 Msa0790660:CDS
ACCGACTTTGTCATATCCTT+GGG 0.452958 5_3:+1529908 Msa0790660:CDS
AAAACAACAACAGCACGAGC+AGG 0.453602 5_3:-1529335 None:intergenic
TTTCTTCCGCTGAGCAAGAA+AGG 0.454492 5_3:+1530596 Msa0790660:CDS
CCTTCCTGAATAGCTGAGAT+AGG 0.455053 5_3:-1530289 None:intergenic
TAACACGACCCATAAAGTTT+AGG 0.458987 5_3:-1530516 None:intergenic
ATTTCCTATTTCATTGAAGC+AGG 0.465510 5_3:+1529436 Msa0790660:CDS
GGGGTTCCGACACCAAGAAT+TGG 0.468962 5_3:+1529177 Msa0790660:CDS
TCTACCTTCGTGTTGTACTT+AGG 0.472018 5_3:+1529611 Msa0790660:CDS
AATATTTGAGGTAACGATGT+TGG 0.472032 5_3:-1530328 None:intergenic
AGCATTTAGCTCATAGGAAA+TGG 0.472326 5_3:-1530218 None:intergenic
GCCCACTGTCCCTGTTGAAT+AGG 0.474061 5_3:-1529248 None:intergenic
AGTGCTGGTGAGGGAGGAAA+AGG 0.475950 5_3:-1530358 None:intergenic
CCAGAGTACGAATCTGTCAT+TGG 0.478687 5_3:-1530394 None:intergenic
AAAGGTTCACTGAATATTTG+AGG 0.481469 5_3:-1530340 None:intergenic
TTGAAGAGAGTGAGACATCT+TGG 0.483464 5_3:+1529312 Msa0790660:CDS
TTGTTGCATATTAAAATGCT+AGG 0.483851 5_3:+1530783 Msa0790660:three_prime_UTR
GTTGTCATATATAGCAAACT+TGG 0.484168 5_3:-1530089 None:intergenic
CGATCCAGTGCTTTATTAGG+AGG 0.490560 5_3:+1529576 Msa0790660:CDS
CTAAATGCTCTCTGGACAAG+AGG 0.490562 5_3:+1530232 Msa0790660:CDS
CCAAGGCTCGATGGACTCCT+TGG 0.492424 5_3:+1530444 Msa0790660:CDS
CCTATGAGCTAAATGCTCTC+TGG 0.493546 5_3:+1530224 Msa0790660:CDS
CACAGCTCTCATTCACAAGC+AGG 0.495782 5_3:-1530730 None:intergenic
GGTTCAATTGGAGTTACATC+CGG 0.496479 5_3:-1529227 None:intergenic
TTAATATGCAACAAATCAGC+AGG 0.497220 5_3:-1530774 None:intergenic
GTCAAAGTCACATGTTGCTC+CGG 0.499201 5_3:+1529208 Msa0790660:CDS
TCGGTTCTGGTAGCTCTGAT+AGG 0.502232 5_3:-1530420 None:intergenic
AAGCATAGTCCGCGAACTCA+AGG 0.507358 5_3:+1529121 Msa0790660:CDS
TTGGATTGGTGGAGTTTGCA+AGG 0.512498 5_3:+1529078 Msa0790660:five_prime_UTR
ACAGATTGCAAAGGCTTGGA+AGG 0.518500 5_3:-1530686 None:intergenic
CACCGAGCACTTCAGCATGC+AGG 0.520072 5_3:+1530828 Msa0790660:three_prime_UTR
CACCTGCATGCTGAAGTGCT+CGG 0.521417 5_3:-1530830 None:intergenic
GATCGGATAATCACGAGGAC+CGG 0.524270 5_3:-1529558 None:intergenic
AATAGGTAGCATATCAAAGC+GGG 0.526116 5_3:+1529157 Msa0790660:CDS
GAATCAATACAACTTATACA+TGG 0.527559 5_3:-1530885 None:intergenic
ATTCTCCAGAATCGCGGTGG+CGG 0.530765 5_3:+1528234 Msa0790660:five_prime_UTR
TTCTTCCGCTGAGCAAGAAA+GGG 0.530855 5_3:+1530597 Msa0790660:CDS
AATCAATACAACTTATACAT+GGG 0.535938 5_3:-1530884 None:intergenic
TTGGTGGAGTTTGCAAGGTG+TGG 0.536602 5_3:+1529083 Msa0790660:five_prime_UTR
CCTATCTCAGCTATTCAGGA+AGG 0.539583 5_3:+1530289 Msa0790660:CDS
CCAAGGAGTCCATCGAGCCT+TGG 0.540676 5_3:-1530444 None:intergenic
TGTTCCTCCTAATAAAGCAC+TGG 0.546307 5_3:-1529580 None:intergenic
ATCGGATAATCACGAGGACC+GGG 0.546623 5_3:-1529557 None:intergenic
TGCGAGACTTAATTCTAAGC+AGG 0.549219 5_3:+1530156 Msa0790660:CDS
TCTTTCAGTGCTGGTGAGGG+AGG 0.551006 5_3:-1530364 None:intergenic
CCAATGACAGATTCGTACTC+TGG 0.552500 5_3:+1530394 Msa0790660:CDS
TAGCCGCCAGAAAGATAAGA+AGG 0.555283 5_3:+1529876 Msa0790660:CDS
TAAAGTTTAGGCACCAACAC+TGG 0.555411 5_3:-1530504 None:intergenic
CCAACAAGATTGTTACATGC+TGG 0.555601 5_3:-1530193 None:intergenic
AGCATAGTCCGCGAACTCAA+GGG 0.558850 5_3:+1529122 Msa0790660:CDS
CTTGATAATCTCTTTAGTAA+CGG 0.564764 5_3:-1529387 None:intergenic
CTATCTCAGCTATTCAGGAA+GGG 0.566111 5_3:+1530290 Msa0790660:CDS
CGAGCCAGCAACAAATATGT+TGG 0.568606 5_3:+1529947 Msa0790660:CDS
ACCTATTCAACAGGGACAGT+GGG 0.571704 5_3:+1529247 Msa0790660:CDS
GAGTCCATCGAGCCTTGGCT+CGG 0.572639 5_3:-1530439 None:intergenic
TATCTCAGCTATTCAGGAAG+GGG 0.574086 5_3:+1530291 Msa0790660:CDS
CTCCTAATAAAGCACTGGAT+CGG 0.579253 5_3:-1529575 None:intergenic
TGGAGCTGCTCATGCCACCT+AGG 0.585203 5_3:-1530484 None:intergenic
GGCATGAGCAGCTCCAGTGT+TGG 0.585590 5_3:+1530491 Msa0790660:CDS
GGCCCTTCTTATCTTTCTGG+CGG 0.587954 5_3:-1529879 None:intergenic
TTAGAATTAAGTCTCGCACT+TGG 0.589398 5_3:-1530151 None:intergenic
GGTTGAACTGCAGCGTCATG+TGG 0.590130 5_3:-1530118 None:intergenic
AGAAAGATAAGAAGGGCCAC+AGG 0.590973 5_3:+1529884 Msa0790660:CDS
CTGCAGCGTCATGTGGAGGT+TGG 0.594900 5_3:-1530111 None:intergenic
AGAACCGAGCCAAGGCTCGA+TGG 0.600159 5_3:+1530435 Msa0790660:CDS
ACACCAAGAATTGGCTATGT+CGG 0.600503 5_3:+1529186 Msa0790660:CDS
GCATAGTCCGCGAACTCAAG+GGG 0.603504 5_3:+1529123 Msa0790660:CDS
CTTTATGGGTCGTGTTACAG+TGG 0.607217 5_3:+1530522 Msa0790660:CDS
AAGGCTTGGAAGGCAGAGAG+TGG 0.610317 5_3:-1530676 None:intergenic
GAGTGGGTAAGAGTAGTCCA+TGG 0.613248 5_3:-1530659 None:intergenic
ACAAATATGTTGGTAAACTG+AGG 0.614123 5_3:+1529957 Msa0790660:CDS
TATGACAAAGTCGGTGCCTG+TGG 0.616367 5_3:-1529900 None:intergenic
TAAATGCTCTCTGGACAAGA+GGG 0.617345 5_3:+1530233 Msa0790660:CDS
AGACTCCTCAGCAATGCGGA+AGG 0.618284 5_3:+1529408 Msa0790660:CDS
TATTTGAGGTAACGATGTTG+GGG 0.620267 5_3:-1530326 None:intergenic
GCTTGTCAAACAGATTGCAA+AGG 0.620286 5_3:-1530695 None:intergenic
ACATAGCCAATTCTTGGTGT+CGG 0.630203 5_3:-1529183 None:intergenic
AACCTATTCAACAGGGACAG+TGG 0.631854 5_3:+1529246 Msa0790660:CDS
TCTCACTCTCTTCAACCCTA+CGG 0.632526 5_3:-1529304 None:intergenic
GTGATCCTTCCGCATTGCTG+AGG 0.633651 5_3:-1529413 None:intergenic
ATCAATACAACTTATACATG+GGG 0.637552 5_3:-1530883 None:intergenic
AAAGTAAGAAGAACGAGAAG+TGG 0.638291 5_3:-1528275 None:intergenic
GAGCTACCAGAACCGAGCCA+AGG 0.641949 5_3:+1530427 Msa0790660:CDS
GCGGAAGAAACATTATGAGA+CGG 0.646089 5_3:-1530583 None:intergenic
TGGAAAAGATATATTCACCA+TGG 0.647072 5_3:+1530642 Msa0790660:CDS
GCCCAAGGATATGACAAAGT+CGG 0.650298 5_3:-1529909 None:intergenic
AGGCTTGGAAGGCAGAGAGT+GGG 0.650720 5_3:-1530675 None:intergenic
CCAATTGAACCTATTCAACA+GGG 0.658968 5_3:+1529239 Msa0790660:CDS
AGCCGCCAGAAAGATAAGAA+GGG 0.660186 5_3:+1529877 Msa0790660:CDS
ATCTCAGCTATTCAGGAAGG+GGG 0.669799 5_3:+1530292 Msa0790660:CDS
CACTGGATCGGATAATCACG+AGG 0.678479 5_3:-1529563 None:intergenic
GGCGGTGAAGAAGTAAACGA+TGG 0.686569 5_3:+1528252 Msa0790660:five_prime_UTR
TGAACTGCAGCGTCATGTGG+AGG 0.688082 5_3:-1530115 None:intergenic
GATTACCCTTTCTTGCTCAG+CGG 0.690765 5_3:-1530602 None:intergenic
ATGTCCAAAAGCAATTCAGG+AGG 0.691534 5_3:-1529278 None:intergenic
AACGCGATTCTCCAGAATCG+CGG 0.692412 5_3:+1528228 Msa0790660:five_prime_UTR
ATCAAGACTCCTCAGCAATG+CGG 0.693306 5_3:+1529404 Msa0790660:CDS
AAATGCTAGGCATATCCGCA+CGG 0.696473 5_3:+1530796 Msa0790660:three_prime_UTR
GATCAAAAGCTTCATCAGTG+AGG 0.715213 5_3:-1531006 None:intergenic
CTTCGGTATGTAAATCATGG+AGG 0.716243 5_3:+1529363 Msa0790660:CDS
GAATAGGTAGCATATCAAAG+CGG 0.721866 5_3:+1529156 Msa0790660:CDS
ATAGGTAGCATATCAAAGCG+GGG 0.729686 5_3:+1529158 Msa0790660:CDS
CAAACCTAAGTACAACACGA+AGG 0.754352 5_3:-1529615 None:intergenic
TCGGTGCTTGACGAACCGTG+CGG 0.787880 5_3:-1530811 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTATGTTTATTTATGT+TGG - chr5_3:1528145-1528164 None:intergenic 10.0%
!! ATTTAATATTTATTCATCAA+TGG - chr5_3:1528797-1528816 None:intergenic 10.0%
!!! ATTTTTATGTTAGTTTTAGA+TGG + chr5_3:1528565-1528584 Msa0790660:intron 15.0%
!! AATATAATCAAGGTTTATTA+TGG - chr5_3:1528688-1528707 None:intergenic 15.0%
!! ATAAGTAATGAATATAATCA+AGG - chr5_3:1528698-1528717 None:intergenic 15.0%
!! AATTTGGATTATACTAAAAA+GGG - chr5_3:1529477-1529496 None:intergenic 15.0%
!! TAATTTGGATTATACTAAAA+AGG - chr5_3:1529478-1529497 None:intergenic 15.0%
!! ATACAAAATAGAAAAAATGT+CGG - chr5_3:1529775-1529794 None:intergenic 15.0%
!! CTAAGAAGAAAAAACAAAAT+CGG - chr5_3:1528385-1528404 None:intergenic 20.0%
!! AACAATAACACTATAGAATA+CGG - chr5_3:1528410-1528429 None:intergenic 20.0%
!!! TTTCCATAAAAATCTGAAAT+TGG - chr5_3:1528476-1528495 None:intergenic 20.0%
!!! ATTTCACGTTTTTTCTTTTT+TGG + chr5_3:1528495-1528514 Msa0790660:intron 20.0%
!!! TTTCACGTTTTTTCTTTTTT+GGG + chr5_3:1528496-1528515 Msa0790660:intron 20.0%
!!! TAATTGTAGTTGAATTTTGA+TGG + chr5_3:1528723-1528742 Msa0790660:intron 20.0%
!! TCAAAATTCAATCTTTGATT+TGG - chr5_3:1528763-1528782 None:intergenic 20.0%
!! ATTTGGATTATACTAAAAAG+GGG - chr5_3:1529476-1529495 None:intergenic 20.0%
!! AGTATAATCCAAATTATTCT+TGG + chr5_3:1529482-1529501 Msa0790660:intron 20.0%
!!! CAACATGTTTTTTATACATT+TGG + chr5_3:1530046-1530065 Msa0790660:intron 20.0%
!! AATCAATACAACTTATACAT+GGG - chr5_3:1530887-1530906 None:intergenic 20.0%
! GAGAGAGTTATTTGAATTTA+TGG - chr5_3:1528303-1528322 None:intergenic 25.0%
! TAACCTGAATGAAGAAAAAA+TGG - chr5_3:1528442-1528461 None:intergenic 25.0%
!! AAAATCTGAAATTGGACAAA+AGG - chr5_3:1528468-1528487 None:intergenic 25.0%
!! TGTCCAATTTCAGATTTTTA+TGG + chr5_3:1528470-1528489 Msa0790660:intron 25.0%
!!! TTCACGTTTTTTCTTTTTTG+GGG + chr5_3:1528497-1528516 Msa0790660:intron 25.0%
!!! TTGCAGCATTTTAATTTTGT+AGG + chr5_3:1528651-1528670 Msa0790660:intron 25.0%
!! CTTGATAATCTCTTTAGTAA+CGG - chr5_3:1529390-1529409 None:intergenic 25.0%
!! AAGAAGCATAAAAAACCTAA+GGG - chr5_3:1529508-1529527 None:intergenic 25.0%
!! TAAGAAGCATAAAAAACCTA+AGG - chr5_3:1529509-1529528 None:intergenic 25.0%
! CTTAAAGATGATAACTTACA+TGG - chr5_3:1529644-1529663 None:intergenic 25.0%
! AAAACATGTTGAGATTACAA+GGG - chr5_3:1530037-1530056 None:intergenic 25.0%
! AAAAACATGTTGAGATTACA+AGG - chr5_3:1530038-1530057 None:intergenic 25.0%
!!! ATGTTTTTTATACATTTGGC+AGG + chr5_3:1530050-1530069 Msa0790660:intron 25.0%
! TTGTTGCATATTAAAATGCT+AGG + chr5_3:1530783-1530802 Msa0790660:three_prime_UTR 25.0%
! ATCAATACAACTTATACATG+GGG - chr5_3:1530886-1530905 None:intergenic 25.0%
! GAATCAATACAACTTATACA+TGG - chr5_3:1530888-1530907 None:intergenic 25.0%
!!! TGTATAAGTTGTATTGATTC+TGG + chr5_3:1530888-1530907 Msa0790660:three_prime_UTR 25.0%
!!! GATCCATTTTTTCTTCATTC+AGG + chr5_3:1528436-1528455 Msa0790660:five_prime_UTR 30.0%
ATCAAGGTTTATTATGGTCA+AGG - chr5_3:1528682-1528701 None:intergenic 30.0%
!! CATGCAATGCATTTGTTATA+AGG + chr5_3:1528965-1528984 Msa0790660:intron 30.0%
!! ATTTGTTATAAGGAGCTACA+TGG + chr5_3:1528975-1528994 Msa0790660:intron 30.0%
GCTACATGGTTATATTTGTT+TGG + chr5_3:1528989-1529008 Msa0790660:intron 30.0%
!! TTTGCCTTTGTGTTTTTGTT+AGG + chr5_3:1529032-1529051 Msa0790660:intron 30.0%
TGATCCTAACAAAAACACAA+AGG - chr5_3:1529039-1529058 None:intergenic 30.0%
! TAAAGCTAGAAGCTTTTGTT+TGG + chr5_3:1529059-1529078 Msa0790660:five_prime_UTR 30.0%
ATTATGTCCAAAAGCAATTC+AGG - chr5_3:1529284-1529303 None:intergenic 30.0%
!!! TGTTGTTGTTTTTTGTGCTT+CGG + chr5_3:1529346-1529365 Msa0790660:CDS 30.0%
ATTTCCTATTTCATTGAAGC+AGG + chr5_3:1529436-1529455 Msa0790660:CDS 30.0%
ATTACCTGCTTCAATGAAAT+AGG - chr5_3:1529443-1529462 None:intergenic 30.0%
GAAATTCAACATTCATAGTC+AGG - chr5_3:1529684-1529703 None:intergenic 30.0%
ATTTATTGCGATTTAGACTG+TGG + chr5_3:1529736-1529755 Msa0790660:intron 30.0%
!! GCATTTAAGTGATCTTGTTT+TGG + chr5_3:1529807-1529826 Msa0790660:intron 30.0%
!!! TTGTTTTGGTTTTGTCGTAA+CGG + chr5_3:1529821-1529840 Msa0790660:intron 30.0%
! TTTACCAACATATTTGTTGC+TGG - chr5_3:1529954-1529973 None:intergenic 30.0%
! ACAAATATGTTGGTAAACTG+AGG + chr5_3:1529957-1529976 Msa0790660:CDS 30.0%
AGGATGAAAAGCTGATATAA+GGG - chr5_3:1530012-1530031 None:intergenic 30.0%
TAGGATGAAAAGCTGATATA+AGG - chr5_3:1530013-1530032 None:intergenic 30.0%
AAACATGTTGAGATTACAAG+GGG - chr5_3:1530036-1530055 None:intergenic 30.0%
! ATTTGGCAGGTCTAATTTTT+GGG + chr5_3:1530063-1530082 Msa0790660:intron 30.0%
GTTGTCATATATAGCAAACT+TGG - chr5_3:1530092-1530111 None:intergenic 30.0%
! ATATTTGAGGTAACGATGTT+GGG - chr5_3:1530330-1530349 None:intergenic 30.0%
! AATATTTGAGGTAACGATGT+TGG - chr5_3:1530331-1530350 None:intergenic 30.0%
AAAGGTTCACTGAATATTTG+AGG - chr5_3:1530343-1530362 None:intergenic 30.0%
!!! AGACTTGTTTTTAAGTACCA+AGG - chr5_3:1530464-1530483 None:intergenic 30.0%
TACTTAAAAACAAGTCTCCT+AGG + chr5_3:1530467-1530486 Msa0790660:CDS 30.0%
ATCTTACAGTTTGGAAAGAT+TGG + chr5_3:1530622-1530641 Msa0790660:CDS 30.0%
TGGAAAAGATATATTCACCA+TGG + chr5_3:1530642-1530661 Msa0790660:CDS 30.0%
TTAATATGCAACAAATCAGC+AGG - chr5_3:1530777-1530796 None:intergenic 30.0%
!!! CATAATTTCATTTTAGCTGC+AGG - chr5_3:1530941-1530960 None:intergenic 30.0%
AAAGTAAGAAGAACGAGAAG+TGG - chr5_3:1528278-1528297 None:intergenic 35.0%
GAAGAAGAAGAAGAAGAAGA+AGG - chr5_3:1528339-1528358 None:intergenic 35.0%
AAGTGAGTTGCTCAATTTAG+AGG + chr5_3:1528841-1528860 Msa0790660:intron 35.0%
GTTGCTCAATTTAGAGGATT+CGG + chr5_3:1528847-1528866 Msa0790660:intron 35.0%
!! CTAGAAGCTTTTGTTTGGAT+TGG + chr5_3:1529064-1529083 Msa0790660:five_prime_UTR 35.0%
AAGGGGATGAAAAATGGAAT+AGG + chr5_3:1529140-1529159 Msa0790660:CDS 35.0%
GAATAGGTAGCATATCAAAG+CGG + chr5_3:1529156-1529175 Msa0790660:CDS 35.0%
AATAGGTAGCATATCAAAGC+GGG + chr5_3:1529157-1529176 Msa0790660:CDS 35.0%
TCCAATTGAACCTATTCAAC+AGG + chr5_3:1529238-1529257 Msa0790660:CDS 35.0%
CCAATTGAACCTATTCAACA+GGG + chr5_3:1529239-1529258 Msa0790660:CDS 35.0%
! CATTTGGCAGGTCTAATTTT+TGG + chr5_3:1530062-1530081 Msa0790660:intron 35.0%
! TTTGGCAGGTCTAATTTTTG+GGG + chr5_3:1530064-1530083 Msa0790660:intron 35.0%
TTAGAATTAAGTCTCGCACT+TGG - chr5_3:1530154-1530173 None:intergenic 35.0%
! AGCATTTAGCTCATAGGAAA+TGG - chr5_3:1530221-1530240 None:intergenic 35.0%
TATACCTATCTCAGCTATTC+AGG + chr5_3:1530285-1530304 Msa0790660:CDS 35.0%
! TATTTGAGGTAACGATGTTG+GGG - chr5_3:1530329-1530348 None:intergenic 35.0%
TTAAAAACAAGTCTCCTAGG+TGG + chr5_3:1530470-1530489 Msa0790660:CDS 35.0%
! TGTTGGTGCCTAAACTTTAT+GGG + chr5_3:1530508-1530527 Msa0790660:CDS 35.0%
TAACACGACCCATAAAGTTT+AGG - chr5_3:1530519-1530538 None:intergenic 35.0%
GAAAGGGTAATCTTACAGTT+TGG + chr5_3:1530613-1530632 Msa0790660:CDS 35.0%
!! TCTGCTTTTGAACTCAAACG+TGG - chr5_3:1528106-1528125 None:intergenic 40.0%
! AGAGGATTCGGATCCAATTT+TGG + chr5_3:1528859-1528878 Msa0790660:intron 40.0%
! GAGGATTCGGATCCAATTTT+GGG + chr5_3:1528860-1528879 Msa0790660:intron 40.0%
CAAACAATCCAGCCCAAAAT+TGG - chr5_3:1528875-1528894 None:intergenic 40.0%
!! GAAGCTTTTGTTTGGATTGG+TGG + chr5_3:1529067-1529086 Msa0790660:five_prime_UTR 40.0%
GAACTCAAGGGGATGAAAAA+TGG + chr5_3:1529134-1529153 Msa0790660:CDS 40.0%
ATAGGTAGCATATCAAAGCG+GGG + chr5_3:1529158-1529177 Msa0790660:CDS 40.0%
! ACATAGCCAATTCTTGGTGT+CGG - chr5_3:1529186-1529205 None:intergenic 40.0%
ACACCAAGAATTGGCTATGT+CGG + chr5_3:1529186-1529205 Msa0790660:CDS 40.0%
GGTTCAATTGGAGTTACATC+CGG - chr5_3:1529230-1529249 None:intergenic 40.0%
CCCTGTTGAATAGGTTCAAT+TGG - chr5_3:1529242-1529261 None:intergenic 40.0%
! TCTACCTCCTGAATTGCTTT+TGG + chr5_3:1529274-1529293 Msa0790660:CDS 40.0%
ATGTCCAAAAGCAATTCAGG+AGG - chr5_3:1529281-1529300 None:intergenic 40.0%
! TGCTTTTGGACATAATCCGT+AGG + chr5_3:1529288-1529307 Msa0790660:CDS 40.0%
! GCTTTTGGACATAATCCGTA+GGG + chr5_3:1529289-1529308 Msa0790660:CDS 40.0%
TTGAAGAGAGTGAGACATCT+TGG + chr5_3:1529312-1529331 Msa0790660:CDS 40.0%
GTGCTTCGGTATGTAAATCA+TGG + chr5_3:1529360-1529379 Msa0790660:CDS 40.0%
CTTCGGTATGTAAATCATGG+AGG + chr5_3:1529363-1529382 Msa0790660:CDS 40.0%
CCTAAGGGCCAAGAATAATT+TGG - chr5_3:1529493-1529512 None:intergenic 40.0%
CCAAATTATTCTTGGCCCTT+AGG + chr5_3:1529490-1529509 Msa0790660:intron 40.0%
CCTTATGTGTATGAATAGCC+CGG + chr5_3:1529539-1529558 Msa0790660:intron 40.0%
! ATCCGATCCAGTGCTTTATT+AGG + chr5_3:1529573-1529592 Msa0790660:CDS 40.0%
!! CTCCTAATAAAGCACTGGAT+CGG - chr5_3:1529578-1529597 None:intergenic 40.0%
TGTTCCTCCTAATAAAGCAC+TGG - chr5_3:1529583-1529602 None:intergenic 40.0%
TCTACCTTCGTGTTGTACTT+AGG + chr5_3:1529611-1529630 Msa0790660:CDS 40.0%
CAAACCTAAGTACAACACGA+AGG - chr5_3:1529618-1529637 None:intergenic 40.0%
CTTCGTGTTGTACTTAGGTT+TGG + chr5_3:1529616-1529635 Msa0790660:CDS 40.0%
! GTTTTGTCGTAACGGTATAG+CGG + chr5_3:1529829-1529848 Msa0790660:intron 40.0%
! ACCGACTTTGTCATATCCTT+GGG + chr5_3:1529908-1529927 Msa0790660:CDS 40.0%
AGAAAAATCATCTGTGCCCA+AGG - chr5_3:1529927-1529946 None:intergenic 40.0%
! TGGTAAACTGAGGCAAGTTT+TGG + chr5_3:1529967-1529986 Msa0790660:intron 40.0%
ATGTTGAGATTACAAGGGGT+AGG - chr5_3:1530032-1530051 None:intergenic 40.0%
TGCGAGACTTAATTCTAAGC+AGG + chr5_3:1530156-1530175 Msa0790660:CDS 40.0%
CCAACAAGATTGTTACATGC+TGG - chr5_3:1530196-1530215 None:intergenic 40.0%
CCAGCATGTAACAATCTTGT+TGG + chr5_3:1530193-1530212 Msa0790660:CDS 40.0%
TAAATGCTCTCTGGACAAGA+GGG + chr5_3:1530233-1530252 Msa0790660:CDS 40.0%
CTATCTCAGCTATTCAGGAA+GGG + chr5_3:1530290-1530309 Msa0790660:CDS 40.0%
TATCTCAGCTATTCAGGAAG+GGG + chr5_3:1530291-1530310 Msa0790660:CDS 40.0%
!!! TTTTCTTTCAGTGCTGGTGA+GGG - chr5_3:1530370-1530389 None:intergenic 40.0%
!!! TTTTTCTTTCAGTGCTGGTG+AGG - chr5_3:1530371-1530390 None:intergenic 40.0%
!!! GGACTTTTTTCTTTCAGTGC+TGG - chr5_3:1530376-1530395 None:intergenic 40.0%
TAAAGTTTAGGCACCAACAC+TGG - chr5_3:1530507-1530526 None:intergenic 40.0%
! GTGTTGGTGCCTAAACTTTA+TGG + chr5_3:1530507-1530526 Msa0790660:CDS 40.0%
GCGGAAGAAACATTATGAGA+CGG - chr5_3:1530586-1530605 None:intergenic 40.0%
TCAAACAGATTGCAAAGGCT+TGG - chr5_3:1530693-1530712 None:intergenic 40.0%
GCTTGTCAAACAGATTGCAA+AGG - chr5_3:1530698-1530717 None:intergenic 40.0%
GATCAAAAGCTTCATCAGTG+AGG - chr5_3:1531009-1531028 None:intergenic 40.0%
! GATTCTGGAGAATCGCGTTT+GGG - chr5_3:1528227-1528246 None:intergenic 45.0%
! ATTCGGATCCAATTTTGGGC+TGG + chr5_3:1528864-1528883 Msa0790660:intron 45.0%
!! TTGGATTGGTGGAGTTTGCA+AGG + chr5_3:1529078-1529097 Msa0790660:five_prime_UTR 45.0%
! TTTTCATCCCCTTGAGTTCG+CGG - chr5_3:1529133-1529152 None:intergenic 45.0%
TGACCGACATAGCCAATTCT+TGG - chr5_3:1529192-1529211 None:intergenic 45.0%
GTCAAAGTCACATGTTGCTC+CGG + chr5_3:1529208-1529227 Msa0790660:CDS 45.0%
AACCTATTCAACAGGGACAG+TGG + chr5_3:1529246-1529265 Msa0790660:CDS 45.0%
ACCTATTCAACAGGGACAGT+GGG + chr5_3:1529247-1529266 Msa0790660:CDS 45.0%
TCTCACTCTCTTCAACCCTA+CGG - chr5_3:1529307-1529326 None:intergenic 45.0%
AAAACAACAACAGCACGAGC+AGG - chr5_3:1529338-1529357 None:intergenic 45.0%
ATCAAGACTCCTCAGCAATG+CGG + chr5_3:1529404-1529423 Msa0790660:CDS 45.0%
CCGGGCTATTCATACACATA+AGG - chr5_3:1529542-1529561 None:intergenic 45.0%
! CGATCCAGTGCTTTATTAGG+AGG + chr5_3:1529576-1529595 Msa0790660:CDS 45.0%
TAGCCGCCAGAAAGATAAGA+AGG + chr5_3:1529876-1529895 Msa0790660:CDS 45.0%
AGCCGCCAGAAAGATAAGAA+GGG + chr5_3:1529877-1529896 Msa0790660:CDS 45.0%
TGTGGCCCTTCTTATCTTTC+TGG - chr5_3:1529885-1529904 None:intergenic 45.0%
AGAAAGATAAGAAGGGCCAC+AGG + chr5_3:1529884-1529903 Msa0790660:CDS 45.0%
!! CACCGACTTTGTCATATCCT+TGG + chr5_3:1529907-1529926 Msa0790660:CDS 45.0%
GCCCAAGGATATGACAAAGT+CGG - chr5_3:1529912-1529931 None:intergenic 45.0%
CGAGCCAGCAACAAATATGT+TGG + chr5_3:1529947-1529966 Msa0790660:CDS 45.0%
!! CCAGAGAGCATTTAGCTCAT+AGG - chr5_3:1530227-1530246 None:intergenic 45.0%
CCTATGAGCTAAATGCTCTC+TGG + chr5_3:1530224-1530243 Msa0790660:CDS 45.0%
CTAAATGCTCTCTGGACAAG+AGG + chr5_3:1530232-1530251 Msa0790660:CDS 45.0%
ATGATGCAGTGCACTCTTCT+TGG - chr5_3:1530259-1530278 None:intergenic 45.0%
CCTTCCTGAATAGCTGAGAT+AGG - chr5_3:1530292-1530311 None:intergenic 45.0%
CCTATCTCAGCTATTCAGGA+AGG + chr5_3:1530289-1530308 Msa0790660:CDS 45.0%
ATCTCAGCTATTCAGGAAGG+GGG + chr5_3:1530292-1530311 Msa0790660:CDS 45.0%
CCAGAGTACGAATCTGTCAT+TGG - chr5_3:1530397-1530416 None:intergenic 45.0%
CCAATGACAGATTCGTACTC+TGG + chr5_3:1530394-1530413 Msa0790660:CDS 45.0%
CTTTATGGGTCGTGTTACAG+TGG + chr5_3:1530522-1530541 Msa0790660:CDS 45.0%
TTTCTTCCGCTGAGCAAGAA+AGG + chr5_3:1530596-1530615 Msa0790660:CDS 45.0%
TTCTTCCGCTGAGCAAGAAA+GGG + chr5_3:1530597-1530616 Msa0790660:CDS 45.0%
GATTACCCTTTCTTGCTCAG+CGG - chr5_3:1530605-1530624 None:intergenic 45.0%
ACAGATTGCAAAGGCTTGGA+AGG - chr5_3:1530689-1530708 None:intergenic 45.0%
CTCTCATTCACAAGCAGGTT+TGG - chr5_3:1530728-1530747 None:intergenic 45.0%
AAATGCTAGGCATATCCGCA+CGG + chr5_3:1530796-1530815 Msa0790660:three_prime_UTR 45.0%
! CGATTCTGGAGAATCGCGTT+TGG - chr5_3:1528228-1528247 None:intergenic 50.0%
AACGCGATTCTCCAGAATCG+CGG + chr5_3:1528228-1528247 Msa0790660:five_prime_UTR 50.0%
GGCGGTGAAGAAGTAAACGA+TGG + chr5_3:1528252-1528271 Msa0790660:five_prime_UTR 50.0%
TTGGTGGAGTTTGCAAGGTG+TGG + chr5_3:1529083-1529102 Msa0790660:five_prime_UTR 50.0%
AAGCATAGTCCGCGAACTCA+AGG + chr5_3:1529121-1529140 Msa0790660:CDS 50.0%
AGCATAGTCCGCGAACTCAA+GGG + chr5_3:1529122-1529141 Msa0790660:CDS 50.0%
ATCGGATAATCACGAGGACC+GGG - chr5_3:1529560-1529579 None:intergenic 50.0%
GATCGGATAATCACGAGGAC+CGG - chr5_3:1529561-1529580 None:intergenic 50.0%
CACTGGATCGGATAATCACG+AGG - chr5_3:1529566-1529585 None:intergenic 50.0%
GGCCCTTCTTATCTTTCTGG+CGG - chr5_3:1529882-1529901 None:intergenic 50.0%
! TATGACAAAGTCGGTGCCTG+TGG - chr5_3:1529903-1529922 None:intergenic 50.0%
AGGTAACGATGTTGGGGTTG+GGG - chr5_3:1530323-1530342 None:intergenic 50.0%
GAGGTAACGATGTTGGGGTT+GGG - chr5_3:1530324-1530343 None:intergenic 50.0%
TGAGGTAACGATGTTGGGGT+TGG - chr5_3:1530325-1530344 None:intergenic 50.0%
!! TCGGTTCTGGTAGCTCTGAT+AGG - chr5_3:1530423-1530442 None:intergenic 50.0%
GAGTGGGTAAGAGTAGTCCA+TGG - chr5_3:1530662-1530681 None:intergenic 50.0%
CACAGCTCTCATTCACAAGC+AGG - chr5_3:1530733-1530752 None:intergenic 50.0%
ATTCTCCAGAATCGCGGTGG+CGG + chr5_3:1528234-1528253 Msa0790660:five_prime_UTR 55.0%
GCATAGTCCGCGAACTCAAG+GGG + chr5_3:1529123-1529142 Msa0790660:CDS 55.0%
GGGGTTCCGACACCAAGAAT+TGG + chr5_3:1529177-1529196 Msa0790660:CDS 55.0%
GCCCACTGTCCCTGTTGAAT+AGG - chr5_3:1529251-1529270 None:intergenic 55.0%
AGACTCCTCAGCAATGCGGA+AGG + chr5_3:1529408-1529427 Msa0790660:CDS 55.0%
GTGATCCTTCCGCATTGCTG+AGG - chr5_3:1529416-1529435 None:intergenic 55.0%
TGAACTGCAGCGTCATGTGG+AGG - chr5_3:1530118-1530137 None:intergenic 55.0%
GGTTGAACTGCAGCGTCATG+TGG - chr5_3:1530121-1530140 None:intergenic 55.0%
CTCGCACTTGGTCGACGATT+AGG - chr5_3:1530142-1530161 None:intergenic 55.0%
!! AGTGCTGGTGAGGGAGGAAA+AGG - chr5_3:1530361-1530380 None:intergenic 55.0%
!! TCTTTCAGTGCTGGTGAGGG+AGG - chr5_3:1530367-1530386 None:intergenic 55.0%
AGGCTTGGAAGGCAGAGAGT+GGG - chr5_3:1530678-1530697 None:intergenic 55.0%
AAGGCTTGGAAGGCAGAGAG+TGG - chr5_3:1530679-1530698 None:intergenic 55.0%
! CACCTGCATGCTGAAGTGCT+CGG - chr5_3:1530833-1530852 None:intergenic 55.0%
GCGATTCTCCAGAATCGCGG+TGG + chr5_3:1528231-1528250 Msa0790660:five_prime_UTR 60.0%
CTGCAGCGTCATGTGGAGGT+TGG - chr5_3:1530114-1530133 None:intergenic 60.0%
GAGCTACCAGAACCGAGCCA+AGG + chr5_3:1530427-1530446 Msa0790660:CDS 60.0%
!! ATCGAGCCTTGGCTCGGTTC+TGG - chr5_3:1530436-1530455 None:intergenic 60.0%
AGAACCGAGCCAAGGCTCGA+TGG + chr5_3:1530435-1530454 Msa0790660:CDS 60.0%
GAGTCCATCGAGCCTTGGCT+CGG - chr5_3:1530442-1530461 None:intergenic 60.0%
CCAAGGAGTCCATCGAGCCT+TGG - chr5_3:1530447-1530466 None:intergenic 60.0%
! CCAAGGCTCGATGGACTCCT+TGG + chr5_3:1530444-1530463 Msa0790660:CDS 60.0%
TGGAGCTGCTCATGCCACCT+AGG - chr5_3:1530487-1530506 None:intergenic 60.0%
GGCATGAGCAGCTCCAGTGT+TGG + chr5_3:1530491-1530510 Msa0790660:CDS 60.0%
! TCGGTGCTTGACGAACCGTG+CGG - chr5_3:1530814-1530833 None:intergenic 60.0%
CACCGAGCACTTCAGCATGC+AGG + chr5_3:1530828-1530847 Msa0790660:three_prime_UTR 60.0%
CTTCACCGCCACCGCGATTC+TGG - chr5_3:1528242-1528261 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 1528101 1531112 1528101 ID=Msa0790660;Name=Msa0790660
chr5_3 mRNA 1528101 1531112 1528101 ID=Msa0790660-mRNA-1;Parent=Msa0790660;Name=Msa0790660-mRNA-1;_AED=0.05;_eAED=0.05;_QI=413|1|1|1|0.75|0.6|5|368|412
chr5_3 exon 1528101 1528457 1528101 ID=Msa0790660-mRNA-1:exon:547;Parent=Msa0790660-mRNA-1
chr5_3 exon 1529054 1529457 1529054 ID=Msa0790660-mRNA-1:exon:548;Parent=Msa0790660-mRNA-1
chr5_3 exon 1529557 1529644 1529557 ID=Msa0790660-mRNA-1:exon:549;Parent=Msa0790660-mRNA-1
chr5_3 exon 1529849 1529978 1529849 ID=Msa0790660-mRNA-1:exon:550;Parent=Msa0790660-mRNA-1
chr5_3 exon 1530072 1531112 1530072 ID=Msa0790660-mRNA-1:exon:551;Parent=Msa0790660-mRNA-1
chr5_3 five_prime_UTR 1528101 1528457 1528101 ID=Msa0790660-mRNA-1:five_prime_utr;Parent=Msa0790660-mRNA-1
chr5_3 five_prime_UTR 1529054 1529109 1529054 ID=Msa0790660-mRNA-1:five_prime_utr;Parent=Msa0790660-mRNA-1
chr5_3 CDS 1529110 1529457 1529110 ID=Msa0790660-mRNA-1:cds;Parent=Msa0790660-mRNA-1
chr5_3 CDS 1529557 1529644 1529557 ID=Msa0790660-mRNA-1:cds;Parent=Msa0790660-mRNA-1
chr5_3 CDS 1529849 1529978 1529849 ID=Msa0790660-mRNA-1:cds;Parent=Msa0790660-mRNA-1
chr5_3 CDS 1530072 1530744 1530072 ID=Msa0790660-mRNA-1:cds;Parent=Msa0790660-mRNA-1
chr5_3 three_prime_UTR 1530745 1531112 1530745 ID=Msa0790660-mRNA-1:three_prime_utr;Parent=Msa0790660-mRNA-1
Gene Sequence

>Msa0790660

ATGTCATTCAAAAGCATAGTCCGCGAACTCAAGGGGATGAAAAATGGAATAGGTAGCATATCAAAGCGGGGTTCCGACACCAAGAATTGGCTATGTCGGTCAAAGTCACATGTTGCTCCGGATGTAACTCCAATTGAACCTATTCAACAGGGACAGTGGGCGAGTCTACCTCCTGAATTGCTTTTGGACATAATCCGTAGGGTTGAAGAGAGTGAGACATCTTGGCCTGCTCGTGCTGTTGTTGTTTTTTGTGCTTCGGTATGTAAATCATGGAGGTCCGTTACTAAAGAGATTATCAAGACTCCTCAGCAATGCGGAAGGATCACATTTCCTATTTCATTGAAGCAGCCCGGTCCTCGTGATTATCCGATCCAGTGCTTTATTAGGAGGAACAGAGAAACTTCTACCTTCGTGTTGTACTTAGGTTTGGTGCCATCGGAGCATGAGAGTAATAAGTTGTTGTTAGCCGCCAGAAAGATAAGAAGGGCCACAGGCACCGACTTTGTCATATCCTTGGGCACAGATGATTTTTCTCGAGCCAGCAACAAATATGTTGGTAAACTGAGGTCTAATTTTTGGGGAACCAAGTTTGCTATATATGACAACCAACCTCCACATGACGCTGCAGTTCAACCTAATCGTCGACCAAGTGCGAGACTTAATTCTAAGCAGGTGTCATCAAGAGTTCCAGCATGTAACAATCTTGTTGGCACCATTTCCTATGAGCTAAATGCTCTCTGGACAAGAGGGCCAAGAAGAGTGCACTGCATCATGAACTCTATACCTATCTCAGCTATTCAGGAAGGGGGTATCGCCCCAACCCCAACATCGTTACCTCAAATATTCAGTGAACCTTTTCCTCCCTCACCAGCACTGAAAGAAAAAAGTCCAATGACAGATTCGTACTCTGGTTGCCTATCAGAGCTACCAGAACCGAGCCAAGGCTCGATGGACTCCTTGGTACTTAAAAACAAGTCTCCTAGGTGGCATGAGCAGCTCCAGTGTTGGTGCCTAAACTTTATGGGTCGTGTTACAGTGGCATCTGTTAAGAACTTTCAACTTGTAGCTTCTGTTGATCCGTCTCATAATGTTTCTTCCGCTGAGCAAGAAAGGGTAATCTTACAGTTTGGAAAGATTGGAAAAGATATATTCACCATGGACTACTCTTACCCACTCTCTGCCTTCCAAGCCTTTGCAATCTGTTTGACAAGCTTTGATACCAAACCTGCTTGTGAATGA

Protein sequence

>Msa0790660

MSFKSIVRELKGMKNGIGSISKRGSDTKNWLCRSKSHVAPDVTPIEPIQQGQWASLPPELLLDIIRRVEESETSWPARAVVVFCASVCKSWRSVTKEIIKTPQQCGRITFPISLKQPGPRDYPIQCFIRRNRETSTFVLYLGLVPSEHESNKLLLAARKIRRATGTDFVISLGTDDFSRASNKYVGKLRSNFWGTKFAIYDNQPPHDAAVQPNRRPSARLNSKQVSSRVPACNNLVGTISYELNALWTRGPRRVHCIMNSIPISAIQEGGIAPTPTSLPQIFSEPFPPSPALKEKSPMTDSYSGCLSELPEPSQGSMDSLVLKNKSPRWHEQLQCWCLNFMGRVTVASVKNFQLVASVDPSHNVSSAEQERVILQFGKIGKDIFTMDYSYPLSAFQAFAICLTSFDTKPACE*