AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0011500


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0011500 MtrunA17_Chr2g0323691 83.234 1175 196 1 1 1174 1 1175 0.0 1950
Msa0011500 MtrunA17_Chr2g0323691 31.947 457 211 13 933 1303 794 1236 4.99e-45 179
Msa0011500 MtrunA17_Chr2g0323691 24.940 417 241 12 768 1176 2382 2734 6.44e-21 100
Msa0011500 MtrunA17_Chr2g0323691 25.962 416 223 14 787 1187 1358 1703 6.39e-20 97.1
Msa0011500 MtrunA17_Chr2g0323691 24.599 374 234 13 963 1303 1394 1752 6.75e-17 87.4
Msa0011500 MtrunA17_Chr2g0323691 25.698 358 234 13 964 1297 2436 2785 5.89e-16 84.0
Msa0011500 MtrunA17_Chr2g0323691 25.059 427 225 15 768 1174 1862 2213 1.56e-14 79.3
Msa0011500 MtrunA17_Chr2g0323691 23.989 371 229 14 964 1299 1916 2268 1.17e-13 76.6
Msa0011500 MtrunA17_Chr2g0323691 26.629 353 207 10 747 1055 1919 2263 4.01e-13 74.7
Msa0011500 MtrunA17_Chr2g0323691 24.406 463 285 19 743 1184 2599 3017 5.36e-12 71.2
Msa0011500 MtrunA17_Chr6g0474571 82.027 1174 211 0 1 1174 1 1174 0.0 1933
Msa0011500 MtrunA17_Chr6g0474571 32.594 451 217 14 933 1304 794 1236 2.94e-47 186
Msa0011500 MtrunA17_Chr6g0474571 26.859 417 234 11 768 1176 2382 2735 4.48e-23 107
Msa0011500 MtrunA17_Chr6g0474571 25.115 434 235 15 787 1172 1358 1749 4.11e-17 87.8
Msa0011500 MtrunA17_Chr6g0474571 26.016 369 228 15 960 1297 2432 2786 3.38e-16 85.1
Msa0011500 MtrunA17_Chr6g0474571 24.396 414 243 11 768 1173 1862 2213 3.21e-15 81.6
Msa0011500 MtrunA17_Chr6g0474571 25.227 440 260 16 760 1173 1296 1692 5.88e-15 80.9
Msa0011500 MtrunA17_Chr6g0474571 25.641 273 171 6 795 1037 934 1204 5.33e-13 74.3
Msa0011500 MtrunA17_Chr6g0474571 24.731 372 226 15 964 1299 1395 1748 7.04e-13 73.9
Msa0011500 MtrunA17_Chr1g0172141 82.838 1177 198 3 1 1174 1 1176 0.0 1930
Msa0011500 MtrunA17_Chr1g0172141 31.373 459 215 12 933 1304 793 1238 1.03e-47 187
Msa0011500 MtrunA17_Chr1g0172051 82.723 1175 202 1 1 1174 1 1175 0.0 1930
Msa0011500 MtrunA17_Chr1g0172051 32.088 455 215 13 933 1304 794 1237 1.90e-46 184
Msa0011500 MtrunA17_Chr1g0172051 25.836 538 258 16 768 1297 2378 2782 3.99e-27 120
Msa0011500 MtrunA17_Chr1g0172051 26.379 417 237 13 765 1174 1339 1692 9.02e-19 93.6
Msa0011500 MtrunA17_Chr1g0172051 26.209 393 246 15 939 1303 1890 2266 3.97e-17 87.8
Msa0011500 MtrunA17_Chr1g0172051 25.517 435 262 18 760 1173 1813 2206 1.48e-16 86.3
Msa0011500 MtrunA17_Chr1g0172051 25.758 396 234 17 945 1303 1379 1751 2.49e-15 82.0
Msa0011500 MtrunA17_Chr1g0163761 82.413 1177 204 2 1 1174 1 1177 0.0 1887
Msa0011500 MtrunA17_Chr1g0163761 32.237 456 212 12 933 1304 797 1239 7.69e-50 194
Msa0011500 MtrunA17_Chr1g0163761 25.500 400 230 10 787 1178 1881 2220 3.36e-22 104
Msa0011500 MtrunA17_Chr1g0163761 23.270 477 267 14 761 1186 1336 1764 3.80e-16 84.7
Msa0011500 MtrunA17_Chr1g0163761 25.067 375 231 15 963 1303 1396 1754 1.29e-14 79.7
Msa0011500 MtrunA17_Chr1g0163761 26.630 368 219 16 964 1297 1918 2268 2.10e-14 79.0
Msa0011500 MtrunA17_Chr1g0163761 23.656 465 286 20 743 1184 2082 2500 1.16e-11 70.1
Msa0011500 MtrunA17_Chr1g0163931 81.532 1175 215 2 1 1174 1 1174 0.0 1871
Msa0011500 MtrunA17_Chr1g0163931 31.579 456 215 12 933 1304 794 1236 4.40e-48 189
Msa0011500 MtrunA17_Chr1g0163931 26.750 400 215 11 787 1173 1357 1691 5.07e-24 110
Msa0011500 MtrunA17_Chr1g0163931 24.130 460 287 15 743 1184 1559 1974 4.12e-12 71.2
Msa0011500 MtrunA17_Chr1g0163931 25.806 372 219 17 963 1297 1393 1744 1.14e-11 70.1
Msa0011500 MtrunA17_Chr1g0163891 80.824 1189 212 3 1 1174 1 1188 0.0 1870
Msa0011500 MtrunA17_Chr1g0163891 31.441 458 214 12 933 1304 807 1250 1.97e-46 184
Msa0011500 MtrunA17_Chr1g0163891 24.552 558 280 15 748 1297 2377 2801 2.01e-24 112
Msa0011500 MtrunA17_Chr1g0163891 25.587 426 239 14 761 1174 1347 1706 4.06e-21 101
Msa0011500 MtrunA17_Chr1g0163891 23.614 415 246 11 768 1174 1875 2226 3.81e-16 84.7
Msa0011500 MtrunA17_Chr1g0163891 23.618 398 240 16 945 1303 1393 1765 3.32e-15 81.6
Msa0011500 MtrunA17_Chr1g0163891 24.267 375 231 15 964 1303 1929 2285 4.79e-13 74.7
Msa0011500 MtrunA17_Chr1g0174511 80.544 1177 219 7 1 1173 1 1171 0.0 1870
Msa0011500 MtrunA17_Chr1g0174511 30.568 458 218 12 933 1304 791 1234 3.84e-44 176
Msa0011500 MtrunA17_Chr1g0174511 24.495 396 230 9 787 1173 1355 1690 8.95e-19 93.2
Msa0011500 MtrunA17_Chr1g0174511 23.750 400 249 15 939 1303 1371 1749 8.17e-13 73.6
Msa0011500 MtrunA17_Chr1g0174511 23.908 435 268 15 770 1150 1068 1493 5.70e-11 67.8
Msa0011500 MtrunA17_Chr1g0163791 80.204 1177 225 5 1 1174 1 1172 0.0 1863
Msa0011500 MtrunA17_Chr1g0163791 31.510 457 213 11 933 1303 791 1233 1.57e-46 184
Msa0011500 MtrunA17_Chr1g0163791 24.318 403 243 15 939 1303 1371 1749 1.29e-14 79.7
Msa0011500 MtrunA17_Chr1g0163791 26.142 394 229 14 800 1174 1340 1690 2.43e-14 78.6
Msa0011500 MtrunA17_Chr1g0164011 81.207 1176 219 2 1 1174 1 1176 0.0 1863
Msa0011500 MtrunA17_Chr1g0164011 30.568 458 218 11 933 1304 795 1238 4.24e-48 189
Msa0011500 MtrunA17_Chr1g0164011 24.848 656 385 25 732 1297 1553 2190 5.86e-23 107
Msa0011500 MtrunA17_Chr1g0164011 27.949 390 227 13 800 1174 1344 1694 5.02e-20 97.4
Msa0011500 MtrunA17_Chr1g0164011 24.678 466 280 19 743 1184 2004 2422 4.77e-13 74.7
Msa0011500 MtrunA17_Chr1g0164011 22.785 395 239 16 945 1299 1381 1749 1.01e-12 73.6
Msa0011500 MtrunA17_Chr1g0170881 81.601 1174 215 1 1 1174 1 1173 0.0 1859
Msa0011500 MtrunA17_Chr1g0170881 31.542 428 196 10 960 1304 822 1235 1.99e-48 190
Msa0011500 MtrunA17_Chr1g0170881 25.660 530 282 21 787 1261 1356 1828 4.59e-18 90.9
Msa0011500 MtrunA17_Chr1g0170881 26.230 366 226 15 963 1297 1392 1744 3.08e-11 68.6
Msa0011500 MtrunA17_Chr1g0167981 73.362 1175 308 3 1 1174 1 1171 0.0 1721
Msa0011500 MtrunA17_Chr1g0167981 31.416 452 218 10 933 1304 794 1233 1.25e-46 184
Msa0011500 MtrunA17_Chr1g0167981 27.717 368 222 15 963 1299 1392 1746 1.32e-19 96.3
Msa0011500 MtrunA17_Chr1g0167981 26.810 373 223 15 964 1299 1912 2271 3.11e-18 91.7
Msa0011500 MtrunA17_Chr1g0167981 23.288 584 324 19 768 1301 2383 2892 3.97e-18 91.3
Msa0011500 MtrunA17_Chr1g0167981 29.070 258 164 8 931 1174 1439 1691 6.21e-17 87.4
Msa0011500 MtrunA17_Chr1g0167981 23.680 587 334 18 795 1297 931 1487 1.05e-16 86.7
Msa0011500 MtrunA17_Chr1g0167981 24.798 371 224 13 819 1141 1904 2267 2.79e-13 75.5
Msa0011500 MtrunA17_Chr1g0167981 25.907 386 232 13 747 1085 1915 2293 4.56e-11 68.2
Msa0011500 MtrunA17_Chr1g0163981 83.055 838 142 0 1 838 1 838 0.0 1392
Msa0011500 MtrunA17_Chr1g0164091 82.477 759 127 2 1 753 1 759 0.0 1233
Msa0011500 MtrunA17_Chr1g0172111 80.478 753 142 3 1 753 1 748 0.0 1217
Msa0011500 MtrunA17_Chr1g0172271 82.730 718 123 1 1 717 1 718 0.0 1201
Msa0011500 MtrunA17_Chr8g0359881 81.172 717 133 1 1 717 1 715 0.0 1157
Msa0011500 MtrunA17_Chr6g0475721 78.756 659 138 1 1 659 1 657 0.0 1030
Msa0011500 MtrunA17_Chr1g0172171 80.479 543 103 2 1 543 1 540 0.0 885
Msa0011500 MtrunA17_Chr1g0163861 77.248 545 120 3 1 543 1 543 0.0 852
Msa0011500 MtrunA17_Chr1g0163831 77.909 507 112 0 1 507 1 507 0.0 794
Msa0011500 MtrunA17_Chr2g0313461 39.554 1211 680 20 1 1179 1 1191 0.0 789
Msa0011500 MtrunA17_Chr2g0313461 24.945 453 255 13 926 1299 795 1241 4.14e-21 100
Msa0011500 MtrunA17_Chr2g0313541 39.324 1213 679 23 1 1174 1 1195 0.0 786
Msa0011500 MtrunA17_Chr2g0313541 25.000 468 245 18 926 1297 791 1248 5.78e-17 87.4
Msa0011500 MtrunA17_Chr2g0313541 22.757 602 359 21 741 1297 966 1506 2.75e-14 78.6
Msa0011500 MtrunA17_Chr2g0313591 38.797 1214 680 21 1 1176 1 1189 0.0 771
Msa0011500 MtrunA17_Chr2g0313591 26.432 454 246 15 926 1298 795 1241 3.13e-22 104
Msa0011500 MtrunA17_Chr2g0313591 21.672 586 361 18 795 1297 929 1499 9.18e-14 76.6
Msa0011500 MtrunA17_Chr2g0313491 38.667 1200 666 20 1 1176 1 1154 0.0 764
Msa0011500 MtrunA17_Chr2g0313491 26.773 437 221 13 930 1297 799 1205 3.32e-24 110
Msa0011500 MtrunA17_Chr2g0314301 38.998 1218 680 25 1 1175 1 1198 0.0 764
Msa0011500 MtrunA17_Chr2g0314301 24.401 459 244 13 935 1298 801 1251 7.94e-19 93.2
Msa0011500 MtrunA17_Chr2g0314301 23.549 586 350 20 795 1297 939 1509 1.64e-16 85.9
Msa0011500 MtrunA17_Chr2g0313481 38.213 1209 684 24 1 1163 1 1192 0.0 729
Msa0011500 MtrunA17_Chr2g0313481 23.432 606 351 22 741 1297 973 1514 5.70e-21 100
Msa0011500 MtrunA17_Chr2g0313351 36.790 1215 702 20 1 1176 5 1192 0.0 709
Msa0011500 MtrunA17_Chr2g0313351 23.103 593 350 23 795 1297 926 1502 1.84e-14 79.0
Msa0011500 MtrunA17_Chr2g0313311 36.006 1322 717 25 1 1298 5 1221 0.0 694
Msa0011500 MtrunA17_Chr2g0313311 22.813 583 345 23 795 1297 922 1479 5.21e-15 80.9
Msa0011500 MtrunA17_Chr3g0081941 36.177 1219 705 29 1 1177 1 1188 0.0 670
Msa0011500 MtrunA17_Chr1g0163641 79.075 411 82 1 724 1134 1 407 0.0 623
Msa0011500 MtrunA17_Chr1g0163641 26.994 326 182 11 933 1237 71 361 8.34e-13 72.0
Msa0011500 MtrunA17_Chr2g0313521 37.708 960 537 15 1 947 5 916 0.0 563
Msa0011500 MtrunA17_Chr4g0011671 44.793 701 357 12 1 677 1 695 4.33e-179 546
Msa0011500 MtrunA17_Chr1g0171101 51.391 539 240 5 1 519 1 537 3.11e-170 517
Msa0011500 MtrunA17_Chr2g0313331 36.256 1015 529 23 320 1298 1 933 2.22e-169 537
Msa0011500 MtrunA17_Chr2g0313331 23.328 613 342 24 741 1297 651 1191 1.32e-14 79.3
Msa0011500 MtrunA17_Chr1g0163631 75.779 289 70 0 1 289 1 289 5.53e-149 451
Msa0011500 MtrunA17_Chr4g0011621 45.310 565 285 9 27 576 3 558 1.47e-142 445
Msa0011500 MtrunA17_Chr1g0172261 82.900 269 45 1 846 1113 1 269 1.19e-136 418
Msa0011500 MtrunA17_Chr2g0313431 39.137 649 380 9 1 642 5 645 7.28e-130 414
Msa0011500 MtrunA17_Chr1g0167341 79.476 229 47 0 1 229 1 229 2.20e-116 362
Msa0011500 MtrunA17_Chr1g0146241 28.584 1130 714 33 1 1079 1 1088 2.90e-114 395
Msa0011500 MtrunA17_Chr1g0146241 26.234 385 249 13 800 1171 1406 1768 9.10e-11 67.0
Msa0011500 MtrunA17_Chr1g0163991 58.793 381 126 4 795 1174 568 918 1.36e-111 381
Msa0011500 MtrunA17_Chr1g0163991 79.907 214 43 0 961 1174 1 214 7.43e-98 342
Msa0011500 MtrunA17_Chr1g0163991 30.413 605 303 18 787 1299 397 975 1.69e-57 218
Msa0011500 MtrunA17_Chr1g0163991 39.502 281 142 9 1044 1304 4 276 3.88e-41 166
Msa0011500 MtrunA17_Chr8g0359891 49.684 475 195 10 733 1174 588 1051 1.29e-110 385
Msa0011500 MtrunA17_Chr8g0359891 77.570 214 48 0 961 1174 1 214 1.80e-91 327
Msa0011500 MtrunA17_Chr8g0359891 38.434 281 135 8 1044 1299 4 271 4.96e-39 159
Msa0011500 MtrunA17_Chr8g0359891 26.014 419 240 11 768 1178 2234 2590 1.98e-22 105
Msa0011500 MtrunA17_Chr8g0359891 23.573 543 291 17 761 1206 369 884 1.39e-18 92.8
Msa0011500 MtrunA17_Chr8g0359891 26.196 397 243 16 939 1303 1250 1628 6.71e-17 87.4
Msa0011500 MtrunA17_Chr8g0359891 24.263 441 235 14 787 1175 1234 1627 9.00e-16 83.6
Msa0011500 MtrunA17_Chr8g0359891 24.500 400 234 17 945 1303 415 787 1.49e-14 79.3
Msa0011500 MtrunA17_Chr8g0359891 26.829 369 225 15 960 1297 2284 2638 2.73e-14 78.6
Msa0011500 MtrunA17_Chr8g0359891 23.785 391 240 12 800 1141 141 522 1.44e-11 69.7
Msa0011500 MtrunA17_Chr8g0359841 76.087 230 54 1 1 229 1 230 3.72e-109 343
Msa0011500 MtrunA17_Chr7g0255401 27.085 1307 775 41 60 1249 2 1247 1.06e-106 369
Msa0011500 MtrunA17_Chr7g0255401 20.200 599 363 17 767 1261 837 1424 1.32e-12 72.8
Msa0011500 MtrunA17_Chr5g0414911 28.687 1112 696 34 2 1085 6 1048 5.39e-100 352
Msa0011500 MtrunA17_Chr7g0255111 28.546 1142 731 33 1 1100 5 1103 5.27e-99 350
Msa0011500 MtrunA17_Chr7g0255111 25.313 399 252 17 790 1171 1499 1868 6.94e-11 67.4
Msa0011500 MtrunA17_Chr1g0172161 76.995 213 49 0 961 1173 1 213 4.32e-98 325
Msa0011500 MtrunA17_Chr1g0172161 37.063 286 142 8 1044 1304 4 276 3.86e-43 167
Msa0011500 MtrunA17_Chr1g0172161 24.224 322 170 8 826 1141 3 256 2.09e-12 71.6
Msa0011500 MtrunA17_Chr2g0313281 41.809 409 234 3 1 409 1 405 4.74e-93 309
Msa0011500 MtrunA17_Chr5g0439121 24.798 1238 758 34 1 1169 1 1134 4.39e-92 328
Msa0011500 MtrunA17_Chr3g0100261 26.316 1235 770 41 2 1170 3 1163 1.50e-82 296
Msa0011500 MtrunA17_Chr3g0107211 25.542 1245 741 42 22 1171 23 1176 1.30e-78 283
Msa0011500 MtrunA17_Chr3g0099591 25.083 1208 758 35 3 1174 4 1100 2.64e-78 283
Msa0011500 MtrunA17_Chr2g0313391 38.402 388 237 2 1 388 5 390 4.76e-77 260
Msa0011500 MtrunA17_Chr8g0360991 25.141 1241 775 37 2 1173 3 1158 7.63e-77 278
Msa0011500 MtrunA17_Chr5g0443761 26.852 1080 593 37 163 1176 22 970 1.11e-75 275
Msa0011500 MtrunA17_Chr1g0160951 24.812 1197 712 36 127 1205 21 1147 2.72e-74 273
Msa0011500 MtrunA17_Chr3g0107181 25.806 1023 634 32 34 1020 23 956 5.03e-71 258
Msa0011500 MtrunA17_Chr3g0099571 26.265 1146 685 41 3 1063 4 1074 7.42e-69 254
Msa0011500 MtrunA17_Chr3g0096721 25.579 1036 659 31 34 1005 35 1022 2.40e-65 242
Msa0011500 MtrunA17_Chr2g0313321 41.096 292 172 0 1 292 1 292 2.98e-65 223
Msa0011500 MtrunA17_Chr1g0164101 75.862 145 35 0 1030 1174 1 145 2.70e-64 218
Msa0011500 MtrunA17_Chr1g0164101 38.813 219 99 5 1109 1304 1 207 2.18e-34 132
Msa0011500 MtrunA17_Chr1g0164101 27.103 214 132 6 949 1156 3 198 1.24e-11 66.2
Msa0011500 MtrunA17_Chr7g0229721 26.527 999 622 29 1 961 1 925 3.72e-64 237
Msa0011500 MtrunA17_Chr3g0096821 25.047 1058 650 35 33 1005 30 1029 4.76e-63 235
Msa0011500 MtrunA17_Chr3g0108171 22.593 1350 798 33 3 1173 22 1303 1.00e-62 236
Msa0011500 MtrunA17_Chr3g0108011 24.118 1219 773 37 23 1205 60 1162 1.31e-62 235
Msa0011500 MtrunA17_Chr3g0108821 24.949 974 603 29 45 979 50 934 4.17e-61 231
Msa0011500 MtrunA17_Chr3g0091861 23.217 1262 745 35 61 1186 3 1176 6.57e-61 230
Msa0011500 MtrunA17_Chr3g0108811 25.142 879 553 24 3 842 16 828 4.82e-60 227
Msa0011500 MtrunA17_Chr8g0359851 80.531 113 22 0 249 361 1 113 2.05e-59 199
Msa0011500 MtrunA17_Chr3g0105521 24.638 1173 725 38 153 1296 32 1074 4.21e-59 224
Msa0011500 MtrunA17_Chr7g0223931 28.571 700 405 21 180 842 1 642 3.17e-58 214
Msa0011500 MtrunA17_Chr7g0229751 27.446 838 480 31 61 843 15 779 3.91e-58 217
Msa0011500 MtrunA17_Chr3g0107931 25.142 883 548 25 3 842 27 839 9.95e-58 220
Msa0011500 MtrunA17_Chr3g0105551 25.391 894 561 22 4 864 1 821 3.53e-56 215
Msa0011500 MtrunA17_Chr3g0105481 24.301 1288 739 42 101 1294 45 1190 1.92e-55 212
Msa0011500 MtrunA17_Chr3g0091851 25.837 836 517 23 61 861 3 770 7.84e-55 210
Msa0011500 MtrunA17_Chr3g0097031 26.452 620 398 14 61 645 11 607 1.37e-53 199
Msa0011500 MtrunA17_Chr7g0255411 32.723 382 232 12 247 613 1 372 3.10e-53 191
Msa0011500 MtrunA17_Chr3g0108151 26.929 609 390 15 4 578 6 593 3.24e-53 205
Msa0011500 MtrunA17_Chr3g0105571 28.098 573 357 16 80 619 24 574 5.64e-52 193
Msa0011500 MtrunA17_Chr3g0097641 30.524 534 340 14 135 648 107 629 1.57e-51 199
Msa0011500 MtrunA17_Chr3g0108791 29.515 454 279 11 180 606 1 440 5.41e-49 181
Msa0011500 MtrunA17_Chr3g0108211 29.587 436 264 11 180 585 1 423 9.74e-49 180
Msa0011500 MtrunA17_Chr8g0348191 30.679 427 259 7 1 395 1 422 1.22e-48 179
Msa0011500 MtrunA17_Chr8g0348201 32.199 382 223 10 814 1171 2 371 1.23e-47 187
Msa0011500 MtrunA17_Chr8g0348201 25.000 380 210 10 815 1175 559 882 4.29e-20 97.4
Msa0011500 MtrunA17_Chr8g0348201 23.423 666 350 22 662 1302 943 1473 6.55e-20 97.1
Msa0011500 MtrunA17_Chr8g0348201 25.517 290 176 10 1034 1297 149 424 9.55e-12 70.1
Msa0011500 MtrunA17_Chr3g0107621 27.021 470 313 12 22 476 23 477 7.08e-47 177
Msa0011500 MtrunA17_Chr7g0221171 26.667 780 495 25 163 901 218 961 1.09e-45 179
Msa0011500 MtrunA17_Chr8g0348231 30.645 434 248 8 8 395 9 435 1.30e-44 168
Msa0011500 MtrunA17_Chr3g0105621 26.486 555 341 14 61 582 12 532 1.77e-43 167
Msa0011500 MtrunA17_Chr4g0048421 24.862 724 464 25 1 682 1 686 1.17e-42 169
Msa0011500 MtrunA17_Chr3g0107961 28.741 421 260 12 180 574 1 407 4.03e-42 160
Msa0011500 MtrunA17_Chr3g0108061 27.888 502 310 14 180 645 1 486 2.70e-40 158
Msa0011500 MtrunA17_Chr3g0097631 29.648 398 245 13 180 555 1 385 5.80e-39 150
Msa0011500 MtrunA17_Chr1g0159111 23.885 942 586 42 1 878 1 875 9.19e-39 157
Msa0011500 MtrunA17_Chr7g0221061 27.767 515 340 15 162 649 265 774 5.39e-38 154
Msa0011500 MtrunA17_Chr7g0221021 28.306 484 309 16 167 622 200 673 1.93e-37 152
Msa0011500 MtrunA17_Chr2g0313381 43.316 187 104 2 496 680 2 188 2.38e-37 139
Msa0011500 MtrunA17_Chr4g0048471 27.273 561 337 20 163 683 37 566 5.11e-37 150
Msa0011500 MtrunA17_Chr3g0108101 32.068 237 150 4 180 409 1 233 7.36e-37 140
Msa0011500 MtrunA17_Chr7g0221141 26.127 754 495 25 180 893 1 732 9.64e-37 150
Msa0011500 MtrunA17_Chr2g0313401 46.269 134 71 1 229 362 1 133 2.91e-35 131
Msa0011500 MtrunA17_Chr7g0221071 26.527 524 336 16 163 648 85 597 1.29e-34 141
Msa0011500 MtrunA17_Chr7g0221131 27.704 527 324 18 163 648 230 740 9.99e-34 140
Msa0011500 MtrunA17_Chr5g0443861 32.500 320 182 13 136 450 145 435 2.68e-33 136
Msa0011500 MtrunA17_Chr6g0478721 25.403 559 342 19 163 683 80 601 5.24e-33 138
Msa0011500 MtrunA17_Chr5g0443751 33.032 221 142 4 153 372 108 323 1.08e-31 131
Msa0011500 MtrunA17_Chr2g0313421 33.462 260 156 6 928 1176 46 299 1.36e-31 132
Msa0011500 MtrunA17_Chr2g0313421 24.642 349 225 9 976 1298 15 351 3.01e-15 80.9
Msa0011500 MtrunA17_Chr2g0313421 21.366 688 409 26 653 1297 11 609 4.22e-13 73.9
Msa0011500 MtrunA17_Chr5g0443851 30.225 311 182 12 68 372 76 357 5.20e-31 129
Msa0011500 MtrunA17_Chr3g0100231 25.573 567 349 17 307 842 11 535 4.85e-29 125
Msa0011500 MtrunA17_Chr5g0443871 27.762 353 220 11 28 372 38 363 1.71e-28 122
Msa0011500 MtrunA17_Chr5g0443941 27.731 357 215 12 28 372 38 363 2.61e-28 121
Msa0011500 MtrunA17_Chr7g0220981 27.749 382 253 8 163 527 44 419 4.33e-28 119
Msa0011500 MtrunA17_Chr3g0090371 23.155 1179 724 53 119 1207 143 1229 5.70e-28 123
Msa0011500 MtrunA17_Chr7g0221111 24.442 761 458 31 202 893 14 726 9.36e-28 121
Msa0011500 MtrunA17_Chr2g0299001 23.601 822 469 33 140 864 138 897 9.86e-28 121
Msa0011500 MtrunA17_Chr3g0092241 27.517 596 353 28 119 675 143 698 4.75e-27 119
Msa0011500 MtrunA17_Chr3g0090141 22.661 1165 738 43 119 1186 143 1241 5.20e-27 119
Msa0011500 MtrunA17_Chr3g0100221 29.688 256 173 4 2 252 3 256 1.85e-26 110
Msa0011500 MtrunA17_Chr2g0313371 38.125 160 97 1 711 868 7 166 5.38e-26 105
Msa0011500 MtrunA17_Chr3g0090401 26.727 550 344 19 119 634 354 878 6.78e-26 116
Msa0011500 MtrunA17_Chr1g0169901 25.907 579 361 24 132 675 144 689 8.79e-26 115
Msa0011500 MtrunA17_Chr3g0089211 22.797 1180 731 45 119 1191 190 1296 1.07e-25 115
Msa0011500 MtrunA17_Chr3g0089811 25.705 603 355 21 119 675 143 698 1.21e-25 115
Msa0011500 MtrunA17_Chr1g0164391 22.168 1024 656 41 127 1077 147 1102 1.64e-25 115
Msa0011500 MtrunA17_Chr3g0090431 27.027 555 336 22 119 634 15 539 1.88e-25 114
Msa0011500 MtrunA17_Chr3g0087841 26.667 555 338 22 119 634 143 667 5.59e-25 113
Msa0011500 MtrunA17_Chr1g0172231 25.651 538 259 16 768 1297 696 1100 6.51e-25 113
Msa0011500 MtrunA17_Chr1g0172231 71.831 71 20 0 1234 1304 1 71 9.64e-24 109
Msa0011500 MtrunA17_Chr1g0172231 24.561 342 200 9 787 1082 192 521 1.34e-14 79.3
Msa0011500 MtrunA17_Chr1g0172231 25.172 437 263 17 760 1173 131 526 1.04e-13 76.6
Msa0011500 MtrunA17_Chr1g0172231 22.807 399 242 15 945 1303 214 586 1.06e-11 70.1
Msa0011500 MtrunA17_Chr3g0085651 22.824 1218 748 49 143 1294 154 1245 8.47e-25 112
Msa0011500 MtrunA17_Chr3g0089421 24.959 605 360 19 119 675 142 700 1.67e-24 111
Msa0011500 MtrunA17_Chr3g0089781 25.371 607 352 22 119 675 143 698 1.84e-24 111
Msa0011500 MtrunA17_Chr5g0443931 26.741 359 231 11 28 379 38 371 2.00e-24 109
Msa0011500 MtrunA17_Chr5g0444331 30.204 245 152 8 136 372 125 358 2.44e-24 108
Msa0011500 MtrunA17_Chr3g0089761 25.373 603 357 21 119 675 143 698 2.94e-24 110
Msa0011500 MtrunA17_Chr3g0090651 25.614 570 359 19 142 675 159 699 7.66e-24 109
Msa0011500 MtrunA17_Chr3g0091081 25.963 597 371 23 142 704 159 718 8.85e-24 109
Msa0011500 MtrunA17_Chr3g0090691 26.159 604 363 22 142 704 159 720 1.06e-23 108
Msa0011500 MtrunA17_Chr3g0089961 25.641 546 356 16 119 633 143 669 1.10e-23 108
Msa0011500 MtrunA17_Chr3g0107061 33.140 172 108 3 180 348 1 168 1.40e-23 99.0
Msa0011500 MtrunA17_Chr3g0089991 25.433 578 349 23 142 675 163 702 1.86e-23 108
Msa0011500 MtrunA17_Chr3g0089601 25.812 585 377 19 119 675 141 696 3.57e-23 107
Msa0011500 MtrunA17_Chr3g0089541 24.525 579 352 20 142 675 163 701 3.85e-23 107
Msa0011500 MtrunA17_Chr3g0089501 25.812 585 377 19 119 675 141 696 4.23e-23 106
Msa0011500 MtrunA17_Chr2g0309721 23.929 1191 702 58 119 1191 143 1247 4.79e-23 107
Msa0011500 MtrunA17_Chr3g0091061 25.220 567 365 18 142 675 159 699 6.01e-23 106
Msa0011500 MtrunA17_Chr2g0282991 22.995 1122 677 47 175 1202 196 1224 1.80e-22 105
Msa0011500 MtrunA17_Chr3g0085331 23.090 1152 654 51 138 1206 158 1160 2.67e-22 104
Msa0011500 MtrunA17_Chr3g0082131 24.407 590 391 19 117 675 141 706 2.92e-22 104
Msa0011500 MtrunA17_Chr3g0089251 25.481 624 330 25 119 675 172 727 3.28e-22 104
Msa0011500 MtrunA17_Chr3g0084031 22.664 1081 678 38 119 1107 139 1153 3.54e-22 103
Msa0011500 MtrunA17_Chr1g0163651 66.197 71 24 0 1234 1304 1 71 4.10e-22 95.5
Msa0011500 MtrunA17_Chr5g0443771 28.462 260 155 11 153 403 3 240 5.50e-22 100
Msa0011500 MtrunA17_Chr3g0089651 24.956 565 368 19 142 675 163 702 6.96e-22 103
Msa0011500 MtrunA17_Chr3g0092261 26.125 578 353 21 142 675 195 742 1.13e-21 102
Msa0011500 MtrunA17_Chr3g0089591 26.610 590 357 23 142 680 164 728 4.73e-21 100
Msa0011500 MtrunA17_Chr3g0087581 24.625 800 475 32 143 872 148 889 8.92e-21 99.4
Msa0011500 MtrunA17_Chr8g0348931 23.814 970 585 40 127 1005 148 1054 9.27e-21 99.4
Msa0011500 MtrunA17_Chr1g0164581 24.412 553 365 17 154 675 152 682 1.22e-20 99.0
Msa0011500 MtrunA17_Chr3g0085731 24.742 485 308 16 174 645 224 664 1.25e-20 99.0
Msa0011500 MtrunA17_Chr2g0299151 21.990 1146 675 44 154 1169 159 1215 1.46e-20 99.0
Msa0011500 MtrunA17_Chr5g0410021 22.316 708 414 24 169 785 176 838 2.31e-20 97.8
Msa0011500 MtrunA17_Chr3g0085471 23.882 850 486 33 138 862 158 971 2.70e-20 98.2
Msa0011500 MtrunA17_Chr3g0106001 28.108 370 234 14 300 648 4 362 3.97e-20 95.1
Msa0011500 MtrunA17_Chr3g0089911 25.189 528 319 16 154 633 166 665 1.30e-19 95.1
Msa0011500 MtrunA17_Chr3g0089471 25.944 609 378 26 119 680 143 725 1.47e-19 95.5
Msa0011500 MtrunA17_Chr1g0189551 24.098 693 443 27 6 645 32 694 1.55e-19 95.1
Msa0011500 MtrunA17_Chr8g0348251 24.409 381 211 11 815 1175 111 434 2.16e-19 94.7
Msa0011500 MtrunA17_Chr3g0082791 23.253 787 477 30 138 834 158 907 2.39e-19 94.7
Msa0011500 MtrunA17_Chr5g0410031 23.517 489 319 17 175 627 187 656 2.67e-19 94.4
Msa0011500 MtrunA17_Chr3g0085451 23.262 791 508 31 138 872 130 877 2.92e-19 94.7
Msa0011500 MtrunA17_Chr4g0025391 23.431 1020 613 42 119 1046 133 1076 3.30e-19 94.4
Msa0011500 MtrunA17_Chr5g0410001 23.819 487 319 16 175 627 186 654 4.58e-19 93.6
Msa0011500 MtrunA17_Chr3g0101241 23.666 731 462 32 175 853 176 862 1.19e-18 92.4
Msa0011500 MtrunA17_Chr4g0010651 28.435 313 193 13 173 477 208 497 2.53e-18 91.7
Msa0011500 MtrunA17_Chr5g0431051 22.704 969 601 36 95 1003 88 968 2.62e-18 91.3
Msa0011500 MtrunA17_Chr3g0101271 23.803 731 453 32 175 843 176 864 3.16e-18 90.9
Msa0011500 MtrunA17_Chr7g0257201 22.621 725 446 30 1 647 7 694 3.84e-18 90.5
Msa0011500 MtrunA17_Chr2g0299091 23.598 517 330 23 175 646 166 662 4.18e-18 90.9
Msa0011500 MtrunA17_Chr5g0404741 25.200 500 299 21 169 619 186 659 4.20e-18 90.5
Msa0011500 MtrunA17_Chr3g0082391 23.025 595 375 21 133 681 154 711 6.04e-18 90.1
Msa0011500 MtrunA17_Chr3g0084051 25.461 542 345 18 138 643 158 676 7.19e-18 90.1
Msa0011500 MtrunA17_Chr2g0299121 23.417 521 326 22 175 646 192 688 1.33e-17 89.0
Msa0011500 MtrunA17_Chr7g0219851 23.237 723 442 30 19 674 12 688 1.33e-17 89.0
Msa0011500 MtrunA17_Chr3g0081191 25.000 524 304 25 157 640 179 653 1.82e-17 88.6
Msa0011500 MtrunA17_Chr5g0430141 22.741 963 619 36 103 1003 96 995 2.25e-17 88.2
Msa0011500 MtrunA17_Chr8g0352861 21.907 1091 662 45 138 1083 172 1217 2.56e-17 88.2
Msa0011500 MtrunA17_Chr3g0085501 24.092 523 321 16 138 633 158 631 2.59e-17 88.2
Msa0011500 MtrunA17_Chr6g0456121 22.046 567 350 25 115 643 109 621 3.16e-17 87.8
Msa0011500 MtrunA17_Chr5g0415471 22.034 1180 713 50 3 1083 5 1076 4.33e-17 87.4
Msa0011500 MtrunA17_Chr7g0244231 23.316 965 610 36 101 1003 89 985 5.59e-17 87.0
Msa0011500 MtrunA17_Chr3g0082311 23.860 570 366 26 127 656 147 688 6.63e-17 87.0
Msa0011500 MtrunA17_Chr3g0086151 23.827 554 355 19 119 619 122 661 9.17e-17 86.3
Msa0011500 MtrunA17_Chr3g0085561 23.946 522 323 17 138 633 127 600 1.00e-16 86.3
Msa0011500 MtrunA17_Chr3g0084971 26.415 265 180 5 142 394 149 410 1.24e-16 85.9
Msa0011500 MtrunA17_Chr2g0299101 23.440 529 332 22 167 646 184 688 1.39e-16 85.5
Msa0011500 MtrunA17_Chr7g0221091 35.556 135 85 1 162 296 191 323 1.74e-16 82.8
Msa0011500 MtrunA17_Chr7g0257541 25.000 604 358 24 96 623 106 690 1.88e-16 85.1
Msa0011500 MtrunA17_Chr8g0338261 23.382 680 412 31 41 646 40 684 2.00e-16 85.1
Msa0011500 MtrunA17_Chr3g0086181 23.322 566 358 19 119 650 122 645 2.20e-16 85.1
Msa0011500 MtrunA17_Chr1g0164631 23.985 542 317 19 127 630 140 624 3.57e-16 84.3
Msa0011500 MtrunA17_Chr8g0338671 25.090 554 354 23 106 621 1 531 3.71e-16 83.6
Msa0011500 MtrunA17_Chr3g0086161 22.903 1061 659 42 143 1109 145 1140 5.29e-16 84.0
Msa0011500 MtrunA17_Chr7g0257221 22.994 648 387 26 67 643 81 687 5.92e-16 83.6
Msa0011500 MtrunA17_Chr5g0409971 21.597 551 350 15 175 672 186 707 6.30e-16 83.6
Msa0011500 MtrunA17_Chr3g0113791 23.539 633 371 24 144 703 146 738 6.34e-16 83.6
Msa0011500 MtrunA17_Chr8g0338851 25.397 315 194 12 170 477 121 401 8.11e-16 81.6
Msa0011500 MtrunA17_Chr1g0169951 24.478 719 427 32 1 643 7 685 8.13e-16 82.8
Msa0011500 MtrunA17_Chr6g0454821 25.444 507 326 19 157 650 228 695 8.85e-16 83.2
Msa0011500 MtrunA17_Chr8g0339031 23.951 572 311 22 173 669 218 740 1.76e-15 82.0
Msa0011500 MtrunA17_Chr5g0433771 25.216 579 339 23 146 672 165 701 1.80e-15 82.0
Msa0011500 MtrunA17_Chr4g0027251 24.199 967 592 42 103 998 96 992 2.14e-15 82.0
Msa0011500 MtrunA17_Chr3g0085541 22.811 491 308 16 175 645 224 663 3.37e-15 80.9
Msa0011500 MtrunA17_Chr7g0255681 24.471 331 220 11 157 477 1196 1506 3.65e-15 81.3
Msa0011500 MtrunA17_Chr7g0255681 24.710 259 175 9 161 409 197 445 9.91e-11 67.0
Msa0011500 MtrunA17_Chr3g0113481 26.695 236 156 7 144 366 146 377 4.95e-15 80.5
Msa0011500 MtrunA17_Chr7g0221481 24.955 557 350 19 119 651 122 634 5.51e-15 80.5
Msa0011500 MtrunA17_Chr3g0091041 26.513 347 224 11 144 476 161 490 5.68e-15 79.7
Msa0011500 MtrunA17_Chr3g0105991 25.681 257 174 5 22 271 8 254 6.32e-15 76.3
Msa0011500 MtrunA17_Chr8g0379721 38.614 101 60 1 194 292 142 242 9.33e-15 75.9
Msa0011500 MtrunA17_Chr6g0470011 22.487 965 552 42 156 1078 163 973 1.02e-14 79.7
Msa0011500 MtrunA17_Chr3g0086741 24.721 538 354 20 141 643 169 690 1.08e-14 79.3
Msa0011500 MtrunA17_Chr5g0414181 24.335 526 333 19 139 619 153 658 1.34e-14 79.3
Msa0011500 MtrunA17_Chr3g0087701 23.895 724 397 32 175 846 184 805 1.40e-14 79.3
Msa0011500 MtrunA17_Chr1g0172081 31.928 166 104 4 1017 1174 4 168 1.65e-14 75.5
Msa0011500 MtrunA17_Chr6g0480421 23.985 517 321 19 164 640 64 548 2.31e-14 78.6
Msa0011500 MtrunA17_Chr3g0086621 23.670 545 348 17 119 645 122 616 2.46e-14 78.6
Msa0011500 MtrunA17_Chr3g0085801 22.411 531 314 17 138 619 160 641 2.56e-14 78.6
Msa0011500 MtrunA17_Chr8g0379801 32.418 182 92 7 140 297 144 318 2.61e-14 75.9
Msa0011500 MtrunA17_Chr6g0456131 25.470 479 273 23 182 622 190 622 3.14e-14 78.2
Msa0011500 MtrunA17_Chr1g0167331 35.000 140 87 3 1038 1174 8 146 3.19e-14 75.9
Msa0011500 MtrunA17_Chr4g0037421 21.730 497 322 17 175 619 228 709 3.27e-14 77.8
Msa0011500 MtrunA17_Chr3g0080871 22.234 949 575 37 138 1002 149 1018 3.72e-14 77.8
Msa0011500 MtrunA17_Chr6g0471941 23.185 496 321 22 175 638 193 660 4.77e-14 77.4
Msa0011500 MtrunA17_Chr5g0420331 24.429 569 325 25 157 650 190 728 5.16e-14 77.4
Msa0011500 MtrunA17_Chr5g0429951 23.568 611 374 23 103 647 96 679 7.03e-14 77.0
Msa0011500 MtrunA17_Chr1g0155321 23.784 925 530 41 143 998 140 958 7.58e-14 76.6
Msa0011500 MtrunA17_Chr3g0082871 24.682 628 371 29 68 641 56 635 7.97e-14 76.3
Msa0011500 MtrunA17_Chr2g0299131 27.979 193 119 6 175 352 29 216 9.26e-14 72.0
Msa0011500 MtrunA17_Chr5g0430641 23.548 964 571 43 103 998 96 961 1.75e-13 75.5
Msa0011500 MtrunA17_Chr3g0101181 24.067 536 304 24 155 643 189 668 2.10e-13 75.5
Msa0011500 MtrunA17_Chr8g0353001 25.417 480 297 16 175 636 216 652 2.28e-13 75.1
Msa0011500 MtrunA17_Chr3g0101011 22.491 538 327 21 157 649 190 682 2.51e-13 75.1
Msa0011500 MtrunA17_Chr8g0338251 24.877 406 264 16 98 479 106 494 2.64e-13 74.7
Msa0011500 MtrunA17_Chr1g0163681 31.944 144 90 3 1014 1149 24 167 2.65e-13 69.7
Msa0011500 MtrunA17_Chr8g0352221 24.435 487 305 21 170 622 212 669 3.27e-13 74.7
Msa0011500 MtrunA17_Chr5g0430581 22.949 902 547 35 156 1003 152 959 3.34e-13 74.7
Msa0011500 MtrunA17_Chr3g0086221 23.774 530 362 17 143 643 144 660 3.41e-13 74.7
Msa0011500 MtrunA17_Chr8g0338881 23.137 510 322 20 157 645 219 679 3.45e-13 74.7
Msa0011500 MtrunA17_Chr6g0475491 24.439 401 267 13 106 479 119 510 3.46e-13 74.3
Msa0011500 MtrunA17_Chr6g0467911 25.191 524 333 19 142 647 150 632 4.03e-13 74.3
Msa0011500 MtrunA17_Chr3g0087301 22.559 1055 655 47 89 1078 96 1053 4.71e-13 74.3
Msa0011500 MtrunA17_Chr3g0087541 24.910 277 187 8 138 400 158 427 4.85e-13 74.3
Msa0011500 MtrunA17_Chr3g0084081 23.738 535 331 20 142 619 162 676 4.91e-13 74.3
Msa0011500 MtrunA17_Chr3g0089431 26.429 280 175 10 132 394 158 423 5.80e-13 72.8
Msa0011500 MtrunA17_Chr5g0414201 22.800 807 456 29 95 811 102 831 5.84e-13 73.9
Msa0011500 MtrunA17_Chr3g0112511 23.938 518 308 22 153 619 168 650 8.12e-13 73.6
Msa0011500 MtrunA17_Chr4g0009781 22.873 529 342 22 183 675 198 696 8.87e-13 73.2
Msa0011500 MtrunA17_Chr5g0430901 24.333 300 190 9 97 366 90 382 9.34e-13 73.2
Msa0011500 MtrunA17_Chr4g0009171 23.619 525 320 25 175 650 933 1425 9.58e-13 73.6
Msa0011500 MtrunA17_Chr5g0446611 23.256 516 357 19 137 627 159 660 1.33e-12 72.8
Msa0011500 MtrunA17_Chr4g0011661 42.000 100 51 2 1207 1299 13 112 1.41e-12 72.0
Msa0011500 MtrunA17_Chr8g0379781 32.787 122 64 1 189 292 66 187 1.41e-12 68.2
Msa0011500 MtrunA17_Chr1g0172101 74.419 43 11 0 1262 1304 2 44 1.43e-12 70.9
Msa0011500 MtrunA17_Chr6g0481331 23.030 990 592 47 175 1084 264 1163 1.49e-12 72.8
Msa0011500 MtrunA17_Chr8g0379811 30.539 167 91 5 150 292 15 180 1.59e-12 67.8
Msa0011500 MtrunA17_Chr3g0085551 25.000 532 353 19 143 643 37 553 1.72e-12 72.0
Msa0011500 MtrunA17_Chr8g0379761 29.268 164 95 4 149 292 32 194 1.83e-12 68.2
Msa0011500 MtrunA17_Chr8g0338361 24.855 346 231 14 156 479 35 373 1.85e-12 71.6
Msa0011500 MtrunA17_Chr8g0346831 24.091 880 487 45 175 1003 194 943 1.91e-12 72.4
Msa0011500 MtrunA17_Chr8g0379711 32.787 122 64 1 189 292 57 178 2.13e-12 67.4
Msa0011500 MtrunA17_Chr7g0248431 23.516 438 292 19 78 483 92 518 2.25e-12 71.6
Msa0011500 MtrunA17_Chr3g0101321 22.936 872 533 39 11 785 8 837 2.28e-12 72.0
Msa0011500 MtrunA17_Chr4g0010261 24.688 721 434 35 185 838 200 878 4.15e-12 71.2
Msa0011500 MtrunA17_Chr2g0309151 26.667 405 248 19 242 619 50 432 4.26e-12 70.5
Msa0011500 MtrunA17_Chr6g0470081 22.180 1046 595 46 156 1143 163 1047 4.89e-12 70.9
Msa0011500 MtrunA17_Chr3g0102121 23.140 484 333 18 175 635 219 686 5.27e-12 70.9
Msa0011500 MtrunA17_Chr6g0470021 24.263 746 444 33 156 838 54 741 5.44e-12 70.5
Msa0011500 MtrunA17_Chr2g0299811 21.350 548 340 17 168 650 56 577 6.61e-12 70.5
Msa0011500 MtrunA17_Chr3g0085091 24.861 539 334 23 139 619 144 669 6.73e-12 70.5
Msa0011500 MtrunA17_Chr8g0339011 23.967 484 315 21 173 645 203 644 9.83e-12 70.1
Msa0011500 MtrunA17_Chr4g0010221 24.099 527 332 22 185 675 200 694 1.56e-11 69.3
Msa0011500 MtrunA17_Chr3g0100961 22.635 539 367 18 177 670 200 733 1.76e-11 68.9
Msa0011500 MtrunA17_Chr2g0299841 21.725 603 378 27 96 649 189 746 1.95e-11 68.9
Msa0011500 MtrunA17_Chr6g0480451 23.725 510 325 22 164 640 271 749 2.67e-11 68.6
Msa0011500 MtrunA17_Chr4g0008461 22.889 533 314 22 139 630 122 598 2.84e-11 68.6
Msa0011500 MtrunA17_Chr3g0081341 23.450 742 426 37 177 841 265 941 2.85e-11 68.6
Msa0011500 MtrunA17_Chr7g0257551 27.247 356 204 16 96 408 28 371 3.05e-11 67.4
Msa0011500 MtrunA17_Chr4g0025811 24.708 514 315 23 164 641 206 683 3.31e-11 68.2
Msa0011500 MtrunA17_Chr3g0102281 22.883 555 355 20 175 684 219 745 3.60e-11 68.2
Msa0011500 MtrunA17_Chr5g0430331 25.086 291 190 8 100 364 88 376 3.66e-11 67.0
Msa0011500 MtrunA17_Chr6g0454971 23.745 518 310 23 157 645 229 690 3.72e-11 68.2
Msa0011500 MtrunA17_Chr2g0319921 26.374 273 172 12 165 419 203 464 3.76e-11 68.2
Msa0011500 MtrunA17_Chr6g0468021 25.069 722 436 33 146 814 150 819 4.02e-11 67.8
Msa0011500 MtrunA17_Chr4g0042011 24.848 495 306 21 175 640 224 681 4.23e-11 67.8
Msa0011500 MtrunA17_Chr3g0123111 23.010 917 543 41 143 1004 146 954 4.43e-11 67.8
Msa0011500 MtrunA17_Chr3g0102271 22.381 420 273 14 175 565 220 615 4.54e-11 67.8
Msa0011500 MtrunA17_Chr8g0342201 25.417 480 310 17 169 636 246 689 5.23e-11 67.4
Msa0011500 MtrunA17_Chr6g0484161 22.178 505 316 20 175 641 245 710 5.59e-11 67.4
Msa0011500 MtrunA17_Chr8g0351551 24.053 528 319 21 175 678 216 685 6.01e-11 67.4
Msa0011500 MtrunA17_Chr1g0147141 27.451 204 131 8 175 368 202 398 6.25e-11 67.4
Msa0011500 MtrunA17_Chr3g0081361 22.075 530 318 22 157 643 188 665 7.15e-11 67.0
Msa0011500 MtrunA17_Chr6g0478841 23.570 577 332 26 175 705 211 724 7.53e-11 67.0
Msa0011500 MtrunA17_Chr2g0299791 23.745 518 324 20 175 649 216 705 8.18e-11 67.0
Msa0011500 MtrunA17_Chr4g0010251 22.927 772 496 33 185 901 200 927 9.22e-11 66.6
Msa0011500 MtrunA17_Chr6g0480181 22.491 538 340 20 138 641 182 676 9.76e-11 66.6
Msa0011500 MtrunA17_Chr8g0342911 24.211 475 309 16 175 636 229 665 1.00e-10 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0011500 AT4G27190.1 27.054 913 585 27 1 867 1 878 1.54e-73 266
Msa0011500 AT4G27220.1 28.889 765 488 24 175 914 137 870 3.23e-66 243
Msa0011500 AT4G27220.2 28.889 765 488 24 175 914 145 878 3.71e-66 243
Msa0011500 AT5G05400.1 25.858 874 523 30 30 841 26 836 5.04e-50 192
Msa0011500 AT4G26090.1 25.125 800 485 25 108 881 113 824 6.50e-49 189
Msa0011500 AT4G10780.2 28.816 642 395 21 23 626 26 643 2.60e-47 184
Msa0011500 AT4G10780.1 28.816 642 395 21 23 626 26 643 2.86e-47 184
Msa0011500 AT1G12210.1 24.883 852 571 27 23 841 26 841 2.35e-45 178
Msa0011500 AT1G61190.2 27.243 602 401 17 24 599 26 616 3.85e-45 177
Msa0011500 AT1G61190.3 27.243 602 401 17 24 599 26 616 3.85e-45 177
Msa0011500 AT1G61190.1 27.243 602 401 17 24 599 26 616 6.21e-45 177
Msa0011500 AT1G12290.1 27.212 599 363 19 21 574 24 594 1.50e-44 176
Msa0011500 AT1G12210.3 25.000 832 555 27 43 841 4 799 3.57e-44 174
Msa0011500 AT1G12210.2 25.000 832 555 27 43 841 4 799 3.57e-44 174
Msa0011500 AT1G12280.1 27.229 617 411 17 7 598 14 617 2.21e-43 172
Msa0011500 AT1G12220.1 27.803 651 427 18 22 643 25 661 4.38e-43 171
Msa0011500 AT1G12220.2 27.803 651 427 18 22 643 25 661 4.38e-43 171
Msa0011500 AT1G61180.1 27.586 609 393 19 19 598 22 611 7.88e-43 170
Msa0011500 AT1G61190.4 26.227 591 398 16 24 590 26 602 8.31e-43 170
Msa0011500 AT1G61180.2 27.586 609 393 19 19 598 22 611 1.17e-42 170
Msa0011500 AT5G47260.1 27.317 615 420 16 25 624 22 624 1.82e-42 169
Msa0011500 AT5G05400.2 26.778 717 417 26 175 841 9 667 2.90e-42 167
Msa0011500 AT5G05400.3 26.778 717 417 26 175 841 9 667 2.90e-42 167
Msa0011500 AT1G12290.4 27.241 580 349 19 40 574 1 552 3.86e-42 167
Msa0011500 AT1G12290.3 27.241 580 349 19 40 574 1 552 3.86e-42 167
Msa0011500 AT1G12290.2 27.241 580 349 19 40 574 1 552 3.86e-42 167
Msa0011500 AT1G63350.4 25.434 865 533 33 8 841 13 796 1.79e-41 166
Msa0011500 AT1G12220.3 29.699 532 335 15 119 624 4 522 4.52e-41 164
Msa0011500 AT1G15890.1 28.814 472 304 12 24 476 27 485 2.08e-40 162
Msa0011500 AT1G61310.1 26.452 620 405 18 19 602 24 628 4.66e-40 161
Msa0011500 AT5G43740.1 25.284 704 432 22 24 690 25 671 5.85e-40 161
Msa0011500 AT5G43740.2 25.284 704 432 22 24 690 25 671 5.85e-40 161
Msa0011500 AT1G12280.2 26.758 583 370 15 36 598 1 546 1.13e-39 160
Msa0011500 AT5G43730.4 25.578 692 446 21 23 690 25 671 3.51e-39 158
Msa0011500 AT5G43730.1 25.578 692 446 21 23 690 25 671 3.51e-39 158
Msa0011500 AT5G43730.3 25.578 692 446 21 23 690 25 671 3.51e-39 158
Msa0011500 AT5G43730.2 25.578 692 446 21 23 690 25 671 3.51e-39 158
Msa0011500 AT5G43730.5 25.578 692 446 21 23 690 25 671 3.51e-39 158
Msa0011500 AT1G51480.1 24.941 846 574 29 24 838 26 841 1.04e-38 157
Msa0011500 AT1G63350.1 25.893 672 451 22 8 650 13 666 2.32e-38 156
Msa0011500 AT5G47250.1 27.246 679 382 29 14 643 18 633 2.68e-38 155
Msa0011500 AT1G63350.3 26.347 668 405 26 8 649 13 619 3.39e-38 155
Msa0011500 AT1G63350.2 26.347 668 405 26 8 649 13 619 3.39e-38 155
Msa0011500 AT5G63020.1 26.430 647 416 20 19 630 22 643 1.17e-36 150
Msa0011500 AT1G15890.2 33.016 315 194 9 174 476 16 325 3.16e-36 148
Msa0011500 AT1G61300.1 28.482 481 261 18 175 630 64 486 2.20e-35 145
Msa0011500 AT1G61300.2 25.176 711 408 24 175 841 64 694 1.73e-33 139
Msa0011500 AT1G62630.1 25.634 710 446 22 8 682 13 675 1.36e-28 125
Msa0011500 AT1G63360.2 27.736 530 310 20 185 682 150 638 2.11e-28 124
Msa0011500 AT1G63360.1 27.736 530 310 20 185 682 185 673 2.90e-28 124
Msa0011500 AT1G52660.1 28.044 271 183 6 108 368 92 360 3.13e-26 112
Msa0011500 AT1G52660.2 28.044 271 183 6 108 368 92 360 3.77e-26 112
Msa0011500 AT3G15700.2 32.524 206 131 4 175 374 163 366 1.50e-24 107
Msa0011500 AT3G15700.1 32.524 206 131 4 175 374 163 366 1.58e-24 107
Msa0011500 AT3G14460.1 23.684 532 357 19 175 681 196 703 2.16e-19 95.5
Msa0011500 AT5G35450.2 22.766 593 367 25 175 707 186 747 7.04e-19 93.6
Msa0011500 AT5G35450.1 22.766 593 367 25 175 707 186 747 7.04e-19 93.6
Msa0011500 AT3G14470.1 24.119 539 333 20 138 630 157 665 4.19e-17 87.8
Msa0011500 AT3G14470.2 24.119 539 333 20 138 630 157 665 4.19e-17 87.8
Msa0011500 AT1G58390.1 24.314 510 311 19 175 643 186 661 1.71e-15 82.4
Msa0011500 AT1G58390.2 24.314 510 311 19 175 643 186 661 1.71e-15 82.4
Msa0011500 AT5G43470.3 25.843 267 168 10 149 394 162 419 1.74e-15 82.4
Msa0011500 AT5G43470.2 25.843 267 168 10 149 394 162 419 1.74e-15 82.4
Msa0011500 AT5G43470.4 25.843 267 168 10 149 394 162 419 1.74e-15 82.4
Msa0011500 AT5G43470.1 25.843 267 168 10 149 394 162 419 1.74e-15 82.4
Msa0011500 AT3G07040.1 22.517 453 302 15 175 584 196 642 1.81e-15 82.4
Msa0011500 AT1G58602.2 29.048 210 124 7 175 365 185 388 2.90e-15 82.0
Msa0011500 AT1G58602.1 29.048 210 124 7 175 365 185 388 2.90e-15 82.0
Msa0011500 AT5G48770.1 24.539 542 341 22 148 672 189 679 1.43e-14 79.7
Msa0011500 AT1G59780.2 23.322 566 361 19 157 682 163 695 8.80e-14 77.0
Msa0011500 AT1G59780.1 23.322 566 361 19 157 682 168 700 9.33e-14 77.0
Msa0011500 AT4G11170.1 23.905 548 293 26 175 645 208 708 1.08e-13 76.6
Msa0011500 AT1G50180.1 25.263 285 174 12 177 432 190 464 9.88e-13 73.6
Msa0011500 AT5G66900.1 22.581 558 334 22 162 648 177 707 4.10e-12 71.6
Msa0011500 AT5G66900.2 22.621 557 335 21 162 648 225 755 6.42e-12 70.9
Msa0011500 AT4G33300.2 27.556 225 139 9 160 378 188 394 3.46e-11 68.6
Msa0011500 AT4G33300.1 27.556 225 139 9 160 378 188 394 3.46e-11 68.6
Msa0011500 AT5G45050.2 22.538 599 327 22 175 680 166 720 4.21e-11 68.6

Find 242 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAGGTTGCATTTCCTAATT+TGG 0.120811 1_1:+17364827 Msa0011500:intron
GCTTCAAGTGTGCATTATTT+TGG 0.171083 1_1:-17363857 None:intergenic
TGAGAAGTGAGCTCAATTTA+AGG 0.206782 1_1:-17364854 None:intergenic
CAACCTTCAATTACTTCTTT+TGG 0.234827 1_1:+17363984 Msa0011500:CDS
TTCTCAATTTGAATAAAGTT+TGG 0.241150 1_1:+17364871 Msa0011500:CDS
AACTAAGTACTTTATTTCTT+TGG 0.242312 1_1:+17365879 Msa0011500:CDS
CATATCAAGCTTGACTAAAT+TGG 0.242429 1_1:+17363431 Msa0011500:CDS
CCATCTTGATTCTTTGTCTT+AGG 0.244492 1_1:-17362258 None:intergenic
TCATGCAGCATTGGGGTCTA+TGG 0.245130 1_1:+17362046 Msa0011500:CDS
ACCTGCTGGATTATGCAATT+TGG 0.245294 1_1:-17360774 None:intergenic
TCAATGCATTCTGGAAAATA+TGG 0.250972 1_1:+17363263 Msa0011500:CDS
AATGTGAAGGTTTGCCTCTT+AGG 0.252307 1_1:+17362551 Msa0011500:CDS
AATGTGCTTTATCAACTAAA+TGG 0.253024 1_1:+17363801 Msa0011500:CDS
TTACACAATAATCAAATCTT+TGG 0.256347 1_1:+17362852 Msa0011500:CDS
TTCTTTGACTTTAGAACATT+TGG 0.258952 1_1:+17364205 Msa0011500:CDS
GGTCTATGGGTTGGGTGGGG+TGG 0.260080 1_1:+17362060 Msa0011500:CDS
AATTTAAGGGTATCCAAATT+AGG 0.266502 1_1:-17364840 None:intergenic
TAGTTGATTAAACTCAAATA+TGG 0.269606 1_1:-17365861 None:intergenic
TTGATAGAGGTTATTATAGT+TGG 0.271861 1_1:+17365413 Msa0011500:CDS
TGCAATAACTTATTCTGCTT+TGG 0.277580 1_1:+17362672 Msa0011500:CDS
ATGCTTGATTTGAGTCATTC+AGG 0.283078 1_1:+17363384 Msa0011500:CDS
ATGGATCTTGTTTCAATCTA+TGG 0.283284 1_1:+17362471 Msa0011500:CDS
ATCAAGTTGCCAAGAGTAAT+AGG 0.284129 1_1:+17363342 Msa0011500:CDS
AATAAGTAATTGCTCTTTGA+TGG 0.285525 1_1:+17365013 Msa0011500:CDS
GGACTTAAAGTATTGATTAA+AGG 0.300684 1_1:+17363738 Msa0011500:CDS
TCACTCTTCATTTCAAAGAT+TGG 0.306483 1_1:+17360602 Msa0011500:five_prime_UTR
CCCTTTCTCTTTCAACCAAA+TGG 0.310864 1_1:-17361685 None:intergenic
GAAAGTCATATTGAAGGATA+TGG 0.318990 1_1:+17365181 Msa0011500:CDS
GTGTTAAATTTAGCACTCTA+AGG 0.319178 1_1:-17363173 None:intergenic
GTCTATGGGTTGGGTGGGGT+GGG 0.319785 1_1:+17362061 Msa0011500:CDS
CAATGTGTCCTTTCCCTCCT+TGG 0.329050 1_1:+17363911 Msa0011500:CDS
TCAATGCATCTTTCCAAGAT+TGG 0.339958 1_1:-17362615 None:intergenic
GTGTTTGGATCAATGCATTC+TGG 0.341575 1_1:+17363254 Msa0011500:CDS
CCATTTGGTAATGAACATAA+TGG 0.345073 1_1:+17362346 Msa0011500:CDS
AGGTAACTTCAAGACGTTAA+AGG 0.345678 1_1:+17361622 Msa0011500:CDS
TCTCAATTTGAATAAAGTTT+GGG 0.352745 1_1:+17364872 Msa0011500:CDS
AGAGGAGATTGCAGACTTCT+TGG 0.354656 1_1:+17362192 Msa0011500:CDS
TTCAAAGAGGAGACTATTCT+TGG 0.356489 1_1:+17362223 Msa0011500:CDS
AGACCTTCAAACATTGTGTT+TGG 0.357859 1_1:+17363239 Msa0011500:CDS
ATTCTACTTCATGCAGCATT+GGG 0.359133 1_1:+17362038 Msa0011500:CDS
GCATAGAAACCATTGAGTTT+AGG 0.360059 1_1:-17365908 None:intergenic
GGAATTGAGTTACAAATCAT+TGG 0.361419 1_1:+17362693 Msa0011500:CDS
AAAGATGTTGTTAAAGTTCA+AGG 0.361949 1_1:+17361887 Msa0011500:CDS
TATCATTACCCACATCGTTT+AGG 0.364792 1_1:+17363208 Msa0011500:CDS
GTTGTTAAAGTTCAAGGAAA+AGG 0.371145 1_1:+17361893 Msa0011500:CDS
CACGAACAAAATCATGCATT+TGG 0.372699 1_1:-17362918 None:intergenic
AAGGTGCACGCAAATCGTTC+TGG 0.373238 1_1:+17363029 Msa0011500:CDS
GAATATACCATTGTGCCTAT+TGG 0.374959 1_1:+17361569 Msa0011500:CDS
TCTGTTTCTTGCATCATCTA+TGG 0.382272 1_1:-17362827 None:intergenic
TGATGACGTAAAACCAAGTT+GGG 0.387608 1_1:-17361836 None:intergenic
CTCTGCTGTGTCCATCTTTG+AGG 0.389520 1_1:+17365942 Msa0011500:CDS
TACTTTCTCAAAGTTGCAAT+GGG 0.389893 1_1:+17362778 Msa0011500:CDS
TGAAAACTAATAATTCCTTC+AGG 0.392948 1_1:-17365470 None:intergenic
TGGACAACTTGAAGACAATA+TGG 0.395652 1_1:+17365201 Msa0011500:CDS
GAAAGATATAAAATAGCTAT+TGG 0.395839 1_1:+17363630 Msa0011500:CDS
GCCTCCTCCTCAACAATAGA+TGG 0.398993 1_1:+17361959 Msa0011500:CDS
AAAACAGTGGGGATTCCATT+TGG 0.399668 1_1:+17362331 Msa0011500:CDS
TTTATCGCATCTTAGAAGTA+AGG 0.400151 1_1:+17364256 Msa0011500:CDS
ATGTGAAGGTTTGCCTCTTA+GGG 0.402840 1_1:+17362552 Msa0011500:CDS
ACTTGGTACTAATATACATT+TGG 0.407887 1_1:+17363710 Msa0011500:CDS
ACTTCTTAATCTTATAAACT+TGG 0.409275 1_1:+17363944 Msa0011500:CDS
GAGGAGATTGCAGACTTCTT+GGG 0.410002 1_1:+17362193 Msa0011500:CDS
TTGTACTTGGATGATGTAGA+TGG 0.410421 1_1:+17363771 Msa0011500:CDS
TGGGAAATACCTCTATTACT+TGG 0.412470 1_1:+17363466 Msa0011500:CDS
TGACACAAGGGAGTCGCTTA+AGG 0.412560 1_1:+17361991 Msa0011500:CDS
AAATAGCTATTGGAGATGTA+TGG 0.413958 1_1:+17363640 Msa0011500:CDS
GTATTTATTCCCCTCTACTT+TGG 0.414400 1_1:+17364959 Msa0011500:CDS
TGGGGTCTATGGGTTGGGTG+GGG 0.414962 1_1:+17362057 Msa0011500:CDS
TCTCACATGCTTCTTGCGCC+TGG 0.415168 1_1:-17366010 None:intergenic
GAGAAGTGAGCTCAATTTAA+GGG 0.416032 1_1:-17364853 None:intergenic
ATTGGGGTCTATGGGTTGGG+TGG 0.419498 1_1:+17362055 Msa0011500:CDS
CTCTTTCTCTTGCAGCCTCA+AGG 0.423334 1_1:-17361658 None:intergenic
TTGTTAAAGTTCAAGGAAAA+GGG 0.423506 1_1:+17361894 Msa0011500:CDS
GATCCAAACACAATGTTTGA+AGG 0.426422 1_1:-17363242 None:intergenic
ACGTGGAGATGTTTCAGAAA+TGG 0.427126 1_1:-17363834 None:intergenic
AGCATTGGGGTCTATGGGTT+GGG 0.431328 1_1:+17362052 Msa0011500:CDS
TCAAGATGTGTTGCTTCAAA+TGG 0.436174 1_1:+17362396 Msa0011500:CDS
TTTCCAAAAGAAGTAATTGA+AGG 0.436998 1_1:-17363987 None:intergenic
TTATCATTCTAGATAACATA+TGG 0.438159 1_1:+17362293 Msa0011500:CDS
TCCATTTGGTTGAAAGAGAA+AGG 0.438318 1_1:+17361684 Msa0011500:CDS
ATGTGCTTTATCAACTAAAT+GGG 0.439380 1_1:+17363802 Msa0011500:CDS
TTGGGGTCTATGGGTTGGGT+GGG 0.439882 1_1:+17362056 Msa0011500:CDS
TAACTTGCTTGACGTCCAAT+AGG 0.441814 1_1:-17361584 None:intergenic
AAAAGATGTTCTAAATTGGT+TGG 0.445497 1_1:+17361727 Msa0011500:CDS
CATGCAGCATTGGGGTCTAT+GGG 0.447176 1_1:+17362047 Msa0011500:CDS
TTAAAATATCTATTCTCCTA+TGG 0.448487 1_1:+17364044 Msa0011500:CDS
GTTGAAAGAGAAAGGGGAAA+TGG 0.450127 1_1:+17361692 Msa0011500:CDS
CACAATAATCAAATCTTTGG+AGG 0.450317 1_1:+17362855 Msa0011500:CDS
ATAAGAGGGATGTCCAATCT+TGG 0.450525 1_1:+17362602 Msa0011500:CDS
TTGAATTTGTTCAGAACTCC+AGG 0.453013 1_1:+17365992 Msa0011500:CDS
TACTTATTTCAAGATGTTTG+AGG 0.457049 1_1:-17364998 None:intergenic
ATCAATCTCCCTATTACTCT+TGG 0.457723 1_1:-17363351 None:intergenic
TCAAGTTGCCAAGAGTAATA+GGG 0.459704 1_1:+17363343 Msa0011500:CDS
AGTTGATTAAACTCAAATAT+GGG 0.463014 1_1:-17365860 None:intergenic
TGATTCAAGTCACAAGGAAA+AGG 0.463545 1_1:+17361493 Msa0011500:five_prime_UTR
CCATTTGGTTGAAAGAGAAA+GGG 0.466125 1_1:+17361685 Msa0011500:CDS
AAACTCAATGGTTTCTATGC+TGG 0.468689 1_1:+17365911 Msa0011500:CDS
TTTGGACAATAAATCGTTTG+AGG 0.469401 1_1:-17363075 None:intergenic
GTCAAGCTTGATATGATGTT+GGG 0.472328 1_1:-17363423 None:intergenic
GATTCTACTTCATGCAGCAT+TGG 0.473351 1_1:+17362037 Msa0011500:CDS
AGCATTGTCGTTCCCCAACT+TGG 0.473470 1_1:+17361823 Msa0011500:CDS
ATATAATGAGCTTGAGAAGT+TGG 0.474500 1_1:+17365310 Msa0011500:CDS
ACCATCTATTGTTGAGGAGG+AGG 0.475194 1_1:-17361960 None:intergenic
TTTGAGGAAGCTCGTGCATA+CGG 0.476049 1_1:-17363059 None:intergenic
AAGAGAAAGAGTGCTCCATT+TGG 0.478612 1_1:+17361670 Msa0011500:CDS
CACATCTTCCCAAGTAATAG+AGG 0.480171 1_1:-17363475 None:intergenic
ATTAGAGAAAGTCATATTGA+AGG 0.481604 1_1:+17365175 Msa0011500:CDS
TGCTCACATCTCAAGGAACT+TGG 0.481950 1_1:+17365566 Msa0011500:CDS
TTTGAGTCATTCAGGAATAG+AGG 0.482121 1_1:+17363392 Msa0011500:CDS
AAAACATTGATGCTCAAACT+TGG 0.484325 1_1:+17363693 Msa0011500:CDS
CAGCATTGGGGTCTATGGGT+TGG 0.484454 1_1:+17362051 Msa0011500:CDS
CCATTATGTTCATTACCAAA+TGG 0.484839 1_1:-17362346 None:intergenic
AATTCTAGAACTGTCAAGTT+GGG 0.484971 1_1:-17363549 None:intergenic
TTGATGACGTAAAACCAAGT+TGG 0.487345 1_1:-17361837 None:intergenic
GCTACTGTCACTACCCTAAG+AGG 0.488080 1_1:-17362565 None:intergenic
AATTACAAATTCGTGAGACT+TGG 0.489969 1_1:+17363568 Msa0011500:CDS
AATAAATTGTGAAAATGTGC+AGG 0.491762 1_1:+17365796 Msa0011500:CDS
TAATTCTAGAACTGTCAAGT+TGG 0.491860 1_1:-17363550 None:intergenic
ACACTATTTATCCTCAAAGA+TGG 0.493769 1_1:-17365953 None:intergenic
TCTCAAAGTTGCAATGGGGT+TGG 0.494074 1_1:+17362783 Msa0011500:CDS
GGATACATCACATTTGATAG+AGG 0.494964 1_1:+17365400 Msa0011500:CDS
ACAGAAGTTAAAATTTCCAT+TGG 0.496148 1_1:-17361530 None:intergenic
CATTGGAGAGGGATGAAATG+AGG 0.503237 1_1:+17362710 Msa0011500:CDS
TCTATGAAGGAGATATTGTT+CGG 0.504259 1_1:+17364119 Msa0011500:CDS
ATTGGAGAGGGATGAAATGA+GGG 0.504280 1_1:+17362711 Msa0011500:CDS
CAATGCTGAGCAACTAACAT+TGG 0.508295 1_1:-17361807 None:intergenic
AACTTCAATCTTAGAAATGT+GGG 0.508913 1_1:-17364084 None:intergenic
TTGTGAGTGCAATTCTATGA+AGG 0.509122 1_1:+17364106 Msa0011500:CDS
TTGCTTGAAGTTAAAATAGG+TGG 0.509875 1_1:+17362889 Msa0011500:CDS
GCCAAATTGCATAATCCAGC+AGG 0.512519 1_1:+17360773 Msa0011500:five_prime_UTR
TGGCACTTACCTAAACTCAA+TGG 0.512527 1_1:+17365899 Msa0011500:CDS
TGAAAGACAAGTTAATAAAA+CGG 0.512712 1_1:-17360467 None:intergenic
ACTTTGAAAGTGAAATCCAT+TGG 0.513538 1_1:-17362424 None:intergenic
AACACTAATTGCAAGTCCCT+TGG 0.513747 1_1:-17363597 None:intergenic
GGGAAATACCTCTATTACTT+GGG 0.513781 1_1:+17363467 Msa0011500:CDS
GGGAATAGATACTTCAAGCT+TGG 0.513884 1_1:-17365524 None:intergenic
TAAATTGGAGGAGTTGTACA+TGG 0.518682 1_1:+17363446 Msa0011500:CDS
AGGTGTTGAGAATTTGTACT+TGG 0.521906 1_1:+17363758 Msa0011500:CDS
CAACGAGTGGCTACAGAGAG+TGG 0.522305 1_1:-17365545 None:intergenic
GATTATTGAAGATTTACAAA+GGG 0.522496 1_1:-17363322 None:intergenic
ATACTTGATTTGAAAACAGT+GGG 0.525486 1_1:+17362319 Msa0011500:CDS
ATCTTGTTTCAATCTATGGC+AGG 0.526510 1_1:+17362475 Msa0011500:CDS
CAATGCATTCTGGAAAATAT+GGG 0.527587 1_1:+17363264 Msa0011500:CDS
GGAGAAGCAAAGAAAACCAA+TGG 0.531030 1_1:+17361514 Msa0011500:exon
GTACTTTCTCAAAGTTGCAA+TGG 0.531258 1_1:+17362777 Msa0011500:CDS
CTTTATCAACTAAATGGGAA+AGG 0.533099 1_1:+17363807 Msa0011500:CDS
AGTCAAGCTTGATATGATGT+TGG 0.533278 1_1:-17363424 None:intergenic
ATTGTTGCAGAGGAGAAACT+TGG 0.533531 1_1:+17365719 Msa0011500:CDS
AAGTGTTTCCAAGGAGGGAA+AGG 0.533957 1_1:-17363919 None:intergenic
AAACTTCAATCTTAGAAATG+TGG 0.534190 1_1:-17364085 None:intergenic
TGAACTTATGAATGAAAATG+AGG 0.534198 1_1:+17362447 Msa0011500:CDS
CACTCGTTGCTCACATCTCA+AGG 0.534661 1_1:+17365559 Msa0011500:CDS
AGAAGTAAGGAAAAGTATCA+AGG 0.536713 1_1:+17364269 Msa0011500:CDS
AATGCTGAGCAACTAACATT+GGG 0.537841 1_1:-17361806 None:intergenic
TTCACCATCTATTGTTGAGG+AGG 0.538472 1_1:-17361963 None:intergenic
TGGGGTGGGTAAGACCACTC+TGG 0.539144 1_1:+17362075 Msa0011500:CDS
AAGAAGTACAAGTGTTTCCA+AGG 0.540881 1_1:-17363928 None:intergenic
AATAGCTATTGGAGATGTAT+GGG 0.542373 1_1:+17363641 Msa0011500:CDS
ATATGTTATCTAGAATGATA+AGG 0.543697 1_1:-17362291 None:intergenic
ATCAAGCTTGACTAAATTGG+AGG 0.544480 1_1:+17363434 Msa0011500:CDS
AAACTTTCAACCAAAGTAGA+GGG 0.546650 1_1:-17364969 None:intergenic
CCTAAGACAAAGAATCAAGA+TGG 0.547619 1_1:+17362258 Msa0011500:CDS
CAGAAACAATGCATTGGAAG+AGG 0.549789 1_1:+17365058 Msa0011500:CDS
CAACTTGACTAGCTTGATTG+TGG 0.552919 1_1:+17364917 Msa0011500:CDS
ATCGAACAACTTATGTTCCA+TGG 0.553163 1_1:-17362119 None:intergenic
AACTTCAAGCAAAAGACAAG+TGG 0.554580 1_1:-17362878 None:intergenic
AACTTGGAGCATATTTGTCA+TGG 0.555948 1_1:+17363960 Msa0011500:CDS
AGTACAAGTGTTTCCAAGGA+GGG 0.556562 1_1:-17363924 None:intergenic
CATTTCACCATCTATTGTTG+AGG 0.557437 1_1:-17361966 None:intergenic
AGATGACAGAAACAATGCAT+TGG 0.557966 1_1:+17365052 Msa0011500:CDS
GTGAGACTTGGATGTTGCCA+AGG 0.558761 1_1:+17363580 Msa0011500:CDS
ATTGGAGTTTCTTCAACAAG+TGG 0.560378 1_1:+17360620 Msa0011500:five_prime_UTR
CTTGGGTCTGCGATTCAAAG+AGG 0.563831 1_1:+17362210 Msa0011500:CDS
AAGTTGTTTAACCACTCCAT+AGG 0.566668 1_1:-17364060 None:intergenic
TATCAGGGATTTCTAAAGAA+CGG 0.568786 1_1:-17363128 None:intergenic
TCTAAGAAAACAAGCTGATG+AGG 0.569368 1_1:+17362981 Msa0011500:CDS
ACATAAGTTGTTCGATAGCG+TGG 0.569542 1_1:+17362126 Msa0011500:CDS
GCTTCAAATGGATGTGCCAA+TGG 0.569943 1_1:+17362408 Msa0011500:CDS
GAGTTACAAATCATTGGAGA+GGG 0.570693 1_1:+17362699 Msa0011500:CDS
AGACATTAAAAGAATTCAAG+AGG 0.572268 1_1:+17362174 Msa0011500:CDS
TAATGAGCTTGAGAAGTTGG+AGG 0.573132 1_1:+17365313 Msa0011500:CDS
TGCACACTTGAAGCAAATTG+TGG 0.575136 1_1:+17363866 Msa0011500:CDS
TATGGAGGAAATTGTTGCAG+AGG 0.575986 1_1:+17365709 Msa0011500:CDS
TCAATCTATGGCAGGAGATG+CGG 0.576896 1_1:+17362483 Msa0011500:CDS
AAAACTTTCAACCAAAGTAG+AGG 0.580217 1_1:-17364970 None:intergenic
ACTAATATACATTTGGAGCA+TGG 0.582777 1_1:+17363717 Msa0011500:CDS
TTGGGAAGATGTGAATTCAA+CGG 0.586574 1_1:+17363485 Msa0011500:CDS
CTATTGGAGATGTATGGGAC+TGG 0.586708 1_1:+17363646 Msa0011500:CDS
GAAAGATATACCATATCAAG+TGG 0.588649 1_1:+17362522 Msa0011500:CDS
AAGTAATTGCTCTTTGATGG+AGG 0.591904 1_1:+17365016 Msa0011500:CDS
ACTGTTGCAGAGGAGAAACT+TGG 0.593477 1_1:+17365770 Msa0011500:CDS
TTATGAATGAAAATGAGGCA+TGG 0.598133 1_1:+17362452 Msa0011500:CDS
GAAAGTTGCTCAAACAGCCA+TGG 0.600409 1_1:+17362102 Msa0011500:CDS
TGATTATTGAAGATTTACAA+AGG 0.607031 1_1:-17363323 None:intergenic
CATGGAGGAAACTGTTGCAG+AGG 0.608502 1_1:+17365760 Msa0011500:CDS
TGTTAGTAACCTAAACGATG+TGG 0.608577 1_1:-17363217 None:intergenic
AGGAGGCTACTATATCTAGA+GGG 0.610415 1_1:-17361943 None:intergenic
AGCTTGATATGATGTTGGGT+GGG 0.610853 1_1:-17363419 None:intergenic
TGAGACTTGGATGTTGCCAA+GGG 0.612252 1_1:+17363581 Msa0011500:CDS
TGTGCAGGAAATTGTTGCAG+AGG 0.612468 1_1:+17365811 Msa0011500:CDS
AACGAGTGGCTACAGAGAGT+GGG 0.612554 1_1:-17365544 None:intergenic
CATTTGGTTGAAAGAGAAAG+GGG 0.612683 1_1:+17361686 Msa0011500:CDS
TTGCTATCTTCATAGCACGT+GGG 0.613665 1_1:+17362944 Msa0011500:CDS
TGAGTTACAAATCATTGGAG+AGG 0.613903 1_1:+17362698 Msa0011500:CDS
AAGTAATGATCATACAGAGA+TGG 0.615157 1_1:+17362648 Msa0011500:CDS
CAATGAAAATAACAGTGTAG+AGG 0.625431 1_1:+17365379 Msa0011500:CDS
AGCTTGATTGTGGATAATTG+TGG 0.631941 1_1:+17364927 Msa0011500:CDS
GCTTAAGGAGGACATTGTGA+AGG 0.632329 1_1:+17362006 Msa0011500:CDS
TTTGCTATCTTCATAGCACG+TGG 0.633573 1_1:+17362943 Msa0011500:CDS
AATCTTGGAAAGATGCATTG+AGG 0.633939 1_1:+17362617 Msa0011500:CDS
TTGATTGTGGATAATTGTGG+TGG 0.634978 1_1:+17364930 Msa0011500:CDS
ATATCTATTCTCCTATGGAG+TGG 0.640623 1_1:+17364049 Msa0011500:CDS
CAATTGCAAGAAAATTGTGG+TGG 0.640890 1_1:+17365262 Msa0011500:CDS
AGCAACTTTCTGCACCAGAG+TGG 0.642304 1_1:-17362089 None:intergenic
GAACAATTGCAAGAAAATTG+TGG 0.643327 1_1:+17365259 Msa0011500:CDS
CATACTTGATTTGAAAACAG+TGG 0.646034 1_1:+17362318 Msa0011500:CDS
AAGATGCGATAAATAATCAG+AGG 0.646166 1_1:-17364246 None:intergenic
ATGGTGAAATGTATGACACA+AGG 0.646690 1_1:+17361978 Msa0011500:CDS
CACAAGGGAGTCGCTTAAGG+AGG 0.648869 1_1:+17361994 Msa0011500:CDS
TGCTATCTTCATAGCACGTG+GGG 0.649212 1_1:+17362945 Msa0011500:CDS
GTTAGTAACCTAAACGATGT+GGG 0.652178 1_1:-17363216 None:intergenic
TGGTGAAATGTATGACACAA+GGG 0.654243 1_1:+17361979 Msa0011500:CDS
AAGACAATGAGCTTGAGCAA+AGG 0.654772 1_1:-17360409 None:intergenic
CTTGAGATGTGAGCAACGAG+TGG 0.656593 1_1:-17365558 None:intergenic
CAACTAACATTGGGACGACG+AGG 0.657329 1_1:-17361797 None:intergenic
AAGCTTGATATGATGTTGGG+TGG 0.657783 1_1:-17363420 None:intergenic
TTCTACTTCATGCAGCATTG+GGG 0.658437 1_1:+17362039 Msa0011500:CDS
GAGGAGGCTACTATATCTAG+AGG 0.659844 1_1:-17361944 None:intergenic
AAGTACAAGTGTTTCCAAGG+AGG 0.662043 1_1:-17363925 None:intergenic
AGTTACTTGATATTCTACAA+AGG 0.666592 1_1:+17361602 Msa0011500:CDS
AACTTTCAACCAAAGTAGAG+GGG 0.668136 1_1:-17364968 None:intergenic
ATATGGAGTAGAGATCCTGA+AGG 0.673742 1_1:+17365455 Msa0011500:CDS
GGAGGCTACTATATCTAGAG+GGG 0.676515 1_1:-17361942 None:intergenic
TTGACGTCCAATAGGCACAA+TGG 0.677196 1_1:-17361576 None:intergenic
AAATTGTGGACTGTAAAGAG+AGG 0.687053 1_1:+17363880 Msa0011500:CDS
AAATTGGAGGAGTTGTACAT+GGG 0.691550 1_1:+17363447 Msa0011500:CDS
GGATCACGTTGAAAACCTTG+AGG 0.692907 1_1:+17361643 Msa0011500:CDS
ACTTTCTCAAAGTTGCAATG+GGG 0.703952 1_1:+17362779 Msa0011500:CDS
TACTTGATTTGAAAACAGTG+GGG 0.704177 1_1:+17362320 Msa0011500:CDS
GAGGCTACTATATCTAGAGG+GGG 0.714526 1_1:-17361941 None:intergenic
TTGGTTGGAGAAAGTGAACG+AGG 0.724707 1_1:+17361742 Msa0011500:CDS
GATGACGTAAAACCAAGTTG+GGG 0.752722 1_1:-17361835 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAAATAATTTAAAT+TGG - chr1_1:17365110-17365129 None:intergenic 0.0%
!!! TTTTTAGATTAAATATGTTT+TGG + chr1_1:17360876-17360895 Msa0011500:intron 10.0%
!!! AAATTGTTACAAATTTTATA+CGG - chr1_1:17360971-17360990 None:intergenic 10.0%
!! AAATTAATTAATGAATGAAT+TGG + chr1_1:17364404-17364423 Msa0011500:intron 10.0%
!!! TATTTAAACATTTTTTGAAA+TGG - chr1_1:17364607-17364626 None:intergenic 10.0%
!! TATAAAAAATTGTGAAAATA+TGG + chr1_1:17365691-17365710 Msa0011500:CDS 10.0%
!!! GATGAAAATCATTTTTTTTA+TGG + chr1_1:17361211-17361230 Msa0011500:intron 15.0%
!!! ACAAGTCTTAAATTTTTTAT+TGG + chr1_1:17361299-17361318 Msa0011500:intron 15.0%
!! TTGAATTTCATTATAATCAT+GGG - chr1_1:17361328-17361347 None:intergenic 15.0%
!! ATTGAATTTCATTATAATCA+TGG - chr1_1:17361329-17361348 None:intergenic 15.0%
!!! TTTAAGATTTATATTCCTAA+TGG - chr1_1:17364714-17364733 None:intergenic 15.0%
!!! TTATTTTTTATTTGTACTGA+TGG + chr1_1:17365117-17365136 Msa0011500:intron 15.0%
!! TATAAAAAATTGTGAAAACA+TGG + chr1_1:17365589-17365608 Msa0011500:CDS 15.0%
!! TATAAAAAATTGTGAAAACA+TGG + chr1_1:17365589-17365608 Msa0011500:CDS 15.0%
!! TATAAAAAATTGTGAAAACA+TGG + chr1_1:17365589-17365608 Msa0011500:CDS 15.0%
!! TGAAAGACAAGTTAATAAAA+CGG - chr1_1:17360470-17360489 None:intergenic 20.0%
!!! TTTTTTTGTTGCAATAAGAA+TGG - chr1_1:17360509-17360528 None:intergenic 20.0%
!!! ATTTTGCTATTTATTAGCAA+AGG - chr1_1:17360664-17360683 None:intergenic 20.0%
!! AAATTACTAATTAAAGAGCA+TGG - chr1_1:17360807-17360826 None:intergenic 20.0%
!! AAAATAATGTCACTATTTAG+AGG - chr1_1:17360905-17360924 None:intergenic 20.0%
!! AGAATTGCTAAAAAAAAATC+CGG - chr1_1:17361155-17361174 None:intergenic 20.0%
!!! ACAATACTTTTAAAACTTGA+AGG + chr1_1:17361188-17361207 Msa0011500:intron 20.0%
!!! CAATACTTTTAAAACTTGAA+GGG + chr1_1:17361189-17361208 Msa0011500:intron 20.0%
!! TAATAATAGAACATATGCTT+TGG - chr1_1:17361407-17361426 None:intergenic 20.0%
!! AAGATACTATTTATAGATGA+GGG - chr1_1:17361459-17361478 None:intergenic 20.0%
!! AAAGATACTATTTATAGATG+AGG - chr1_1:17361460-17361479 None:intergenic 20.0%
!!! TTGAAAAAGATGTTCTAAAT+TGG + chr1_1:17361723-17361742 Msa0011500:CDS 20.0%
!!! ATATGTTATCTAGAATGATA+AGG - chr1_1:17362294-17362313 None:intergenic 20.0%
!! TTATCATTCTAGATAACATA+TGG + chr1_1:17362293-17362312 Msa0011500:CDS 20.0%
!! TTACACAATAATCAAATCTT+TGG + chr1_1:17362852-17362871 Msa0011500:CDS 20.0%
!! AAGAAGAAAAACTTAATGTT+TGG - chr1_1:17363096-17363115 None:intergenic 20.0%
!! GATTATTGAAGATTTACAAA+GGG - chr1_1:17363325-17363344 None:intergenic 20.0%
!! TGATTATTGAAGATTTACAA+AGG - chr1_1:17363326-17363345 None:intergenic 20.0%
!! GAAAGATATAAAATAGCTAT+TGG + chr1_1:17363630-17363649 Msa0011500:CDS 20.0%
!! ACTTCTTAATCTTATAAACT+TGG + chr1_1:17363944-17363963 Msa0011500:CDS 20.0%
!!! AGGAGAATAGATATTTTAAT+TGG - chr1_1:17364043-17364062 None:intergenic 20.0%
!! TTAAAATATCTATTCTCCTA+TGG + chr1_1:17364044-17364063 Msa0011500:CDS 20.0%
!! TCTAACTACAAAACTATAAT+AGG + chr1_1:17364521-17364540 Msa0011500:intron 20.0%
!! TTCTTTCTAAATAAGTAGAA+AGG + chr1_1:17364561-17364580 Msa0011500:intron 20.0%
!!! ATGTTAGTTTGTTTTTATGT+AGG + chr1_1:17364809-17364828 Msa0011500:intron 20.0%
!! TTCTCAATTTGAATAAAGTT+TGG + chr1_1:17364871-17364890 Msa0011500:CDS 20.0%
!! TCTCAATTTGAATAAAGTTT+GGG + chr1_1:17364872-17364891 Msa0011500:CDS 20.0%
!! AGGTATAGTAATTCTATTAT+CGG + chr1_1:17365078-17365097 Msa0011500:intron 20.0%
!!! ACATCTTCAATGTTTTAAAT+TGG - chr1_1:17365232-17365251 None:intergenic 20.0%
!! AAAAAATTGTGAAAATATGG+AGG + chr1_1:17365694-17365713 Msa0011500:CDS 20.0%
!! AGTTGATTAAACTCAAATAT+GGG - chr1_1:17365863-17365882 None:intergenic 20.0%
!! TAGTTGATTAAACTCAAATA+TGG - chr1_1:17365864-17365883 None:intergenic 20.0%
!!! AACTAAGTACTTTATTTCTT+TGG + chr1_1:17365879-17365898 Msa0011500:CDS 20.0%
!!! AACTTTCCTTCACTATTTTT+GGG - chr1_1:17360552-17360571 None:intergenic 25.0%
!! AAACTTTCCTTCACTATTTT+TGG - chr1_1:17360553-17360572 None:intergenic 25.0%
! ATTAACTTCTTATGTGACTA+CGG + chr1_1:17361015-17361034 Msa0011500:intron 25.0%
!!! AACTCAATATTTTTTGTCCT+AGG - chr1_1:17361097-17361116 None:intergenic 25.0%
! GAATTGCTAAAAAAAAATCC+GGG - chr1_1:17361154-17361173 None:intergenic 25.0%
! ATGGAGATTAGAACTAAATT+AGG + chr1_1:17361230-17361249 Msa0011500:intron 25.0%
! ACAGTAAAATCCAATCATAA+AGG - chr1_1:17361364-17361383 None:intergenic 25.0%
! ACAGAAGTTAAAATTTCCAT+TGG - chr1_1:17361533-17361552 None:intergenic 25.0%
!!! GAAATTTTAACTTCTGTTGT+TGG + chr1_1:17361536-17361555 Msa0011500:CDS 25.0%
! AGTTACTTGATATTCTACAA+AGG + chr1_1:17361602-17361621 Msa0011500:CDS 25.0%
!! AAAAGATGTTCTAAATTGGT+TGG + chr1_1:17361727-17361746 Msa0011500:CDS 25.0%
!! AACATCTTTTGCAATTTTTG+TGG - chr1_1:17361876-17361895 None:intergenic 25.0%
! AAAGATGTTGTTAAAGTTCA+AGG + chr1_1:17361887-17361906 Msa0011500:CDS 25.0%
! TTGTTAAAGTTCAAGGAAAA+GGG + chr1_1:17361894-17361913 Msa0011500:CDS 25.0%
!! TCTTGAATTCTTTTAATGTC+TGG - chr1_1:17362175-17362194 None:intergenic 25.0%
! AGACATTAAAAGAATTCAAG+AGG + chr1_1:17362174-17362193 Msa0011500:CDS 25.0%
!! ATACTTGATTTGAAAACAGT+GGG + chr1_1:17362319-17362338 Msa0011500:CDS 25.0%
! TGAACTTATGAATGAAAATG+AGG + chr1_1:17362447-17362466 Msa0011500:CDS 25.0%
!! CTTTTGCTTGAAGTTAAAAT+AGG + chr1_1:17362886-17362905 Msa0011500:CDS 25.0%
!!! CTTTTTAGAAAATCATTGGT+TGG - chr1_1:17363012-17363031 None:intergenic 25.0%
!!! CAACCAATGATTTTCTAAAA+AGG + chr1_1:17363010-17363029 Msa0011500:CDS 25.0%
!!! TTGAGCATCAATGTTTTTAA+GGG - chr1_1:17363690-17363709 None:intergenic 25.0%
!!! TTTGAGCATCAATGTTTTTA+AGG - chr1_1:17363691-17363710 None:intergenic 25.0%
! ACTTGGTACTAATATACATT+TGG + chr1_1:17363710-17363729 Msa0011500:CDS 25.0%
!!! GGACTTAAAGTATTGATTAA+AGG + chr1_1:17363738-17363757 Msa0011500:CDS 25.0%
! AATGTGCTTTATCAACTAAA+TGG + chr1_1:17363801-17363820 Msa0011500:CDS 25.0%
! ATGTGCTTTATCAACTAAAT+GGG + chr1_1:17363802-17363821 Msa0011500:CDS 25.0%
! TTTCCAAAAGAAGTAATTGA+AGG - chr1_1:17363990-17364009 None:intergenic 25.0%
! AACTTCAATCTTAGAAATGT+GGG - chr1_1:17364087-17364106 None:intergenic 25.0%
! AAACTTCAATCTTAGAAATG+TGG - chr1_1:17364088-17364107 None:intergenic 25.0%
!!! TTCTTTGACTTTAGAACATT+TGG + chr1_1:17364205-17364224 Msa0011500:CDS 25.0%
! ATACAGTACTAAATTCCATT+AGG + chr1_1:17364696-17364715 Msa0011500:intron 25.0%
!!! AATTTAAGGGTATCCAAATT+AGG - chr1_1:17364843-17364862 None:intergenic 25.0%
! TACTTATTTCAAGATGTTTG+AGG - chr1_1:17365001-17365020 None:intergenic 25.0%
! AATAAGTAATTGCTCTTTGA+TGG + chr1_1:17365013-17365032 Msa0011500:CDS 25.0%
! GGTATAGTAATTCTATTATC+GGG + chr1_1:17365079-17365098 Msa0011500:intron 25.0%
!!! TTTTTTATTTGTACTGATGG+TGG + chr1_1:17365120-17365139 Msa0011500:intron 25.0%
! ATTAGAGAAAGTCATATTGA+AGG + chr1_1:17365175-17365194 Msa0011500:CDS 25.0%
! TTGATAGAGGTTATTATAGT+TGG + chr1_1:17365413-17365432 Msa0011500:CDS 25.0%
! TGTCGAATTTGAAAAAGATA+TGG + chr1_1:17365438-17365457 Msa0011500:CDS 25.0%
! TGAAAACTAATAATTCCTTC+AGG - chr1_1:17365473-17365492 None:intergenic 25.0%
! AAAAAATTGTGAAAACATGG+AGG + chr1_1:17365592-17365611 Msa0011500:CDS 25.0%
! AAAAAATTGTGAAAACATGG+AGG + chr1_1:17365592-17365611 Msa0011500:CDS 25.0%
! AAAAAATTGTGAAAACATGG+AGG + chr1_1:17365592-17365611 Msa0011500:CDS 25.0%
! AATAAATTGTGAAAATGTGC+AGG + chr1_1:17365796-17365815 Msa0011500:CDS 25.0%
TCACTCTTCATTTCAAAGAT+TGG + chr1_1:17360602-17360621 Msa0011500:five_prime_UTR 30.0%
AGTTAATGAATGTTGCAGAT+CGG - chr1_1:17361002-17361021 None:intergenic 30.0%
TTAACTTCTTATGTGACTAC+GGG + chr1_1:17361016-17361035 Msa0011500:intron 30.0%
TTGAGTTCAGAGTAAAACAA+AGG + chr1_1:17361110-17361129 Msa0011500:intron 30.0%
CAAAGGATCATAATTATGCA+AGG + chr1_1:17361127-17361146 Msa0011500:intron 30.0%
ACACATTCTACCTTTATGAT+TGG + chr1_1:17361351-17361370 Msa0011500:intron 30.0%
!!! AGATTTTGATTCAAGTCACA+AGG + chr1_1:17361487-17361506 Msa0011500:intron 30.0%
AGGTCATAAAAAAAGCGAAT+TGG + chr1_1:17361762-17361781 Msa0011500:CDS 30.0%
! TTTTACGTCATCAACTAAGT+AGG + chr1_1:17361846-17361865 Msa0011500:CDS 30.0%
GTTGTTAAAGTTCAAGGAAA+AGG + chr1_1:17361893-17361912 Msa0011500:CDS 30.0%
! AAAGGGATTTTTGATCAAGT+TGG + chr1_1:17361911-17361930 Msa0011500:CDS 30.0%
! CACTGTTTTCAAATCAAGTA+TGG - chr1_1:17362320-17362339 None:intergenic 30.0%
! CATACTTGATTTGAAAACAG+TGG + chr1_1:17362318-17362337 Msa0011500:CDS 30.0%
! TACTTGATTTGAAAACAGTG+GGG + chr1_1:17362320-17362339 Msa0011500:CDS 30.0%
CCATTATGTTCATTACCAAA+TGG - chr1_1:17362349-17362368 None:intergenic 30.0%
!! CCATTTGGTAATGAACATAA+TGG + chr1_1:17362346-17362365 Msa0011500:CDS 30.0%
! ACTTTGAAAGTGAAATCCAT+TGG - chr1_1:17362427-17362446 None:intergenic 30.0%
TTATGAATGAAAATGAGGCA+TGG + chr1_1:17362452-17362471 Msa0011500:CDS 30.0%
! ATGGATCTTGTTTCAATCTA+TGG + chr1_1:17362471-17362490 Msa0011500:CDS 30.0%
GAAAGATATACCATATCAAG+TGG + chr1_1:17362522-17362541 Msa0011500:CDS 30.0%
ACGTGCAATGAAAAATAAGA+GGG + chr1_1:17362588-17362607 Msa0011500:CDS 30.0%
AAGTAATGATCATACAGAGA+TGG + chr1_1:17362648-17362667 Msa0011500:CDS 30.0%
TGCAATAACTTATTCTGCTT+TGG + chr1_1:17362672-17362691 Msa0011500:CDS 30.0%
GGAATTGAGTTACAAATCAT+TGG + chr1_1:17362693-17362712 Msa0011500:CDS 30.0%
TACTTTCTCAAAGTTGCAAT+GGG + chr1_1:17362778-17362797 Msa0011500:CDS 30.0%
CACAATAATCAAATCTTTGG+AGG + chr1_1:17362855-17362874 Msa0011500:CDS 30.0%
TTGCTTGAAGTTAAAATAGG+TGG + chr1_1:17362889-17362908 Msa0011500:CDS 30.0%
!! GCACCTTTTTAGAAAATCAT+TGG - chr1_1:17363016-17363035 None:intergenic 30.0%
TTTGGACAATAAATCGTTTG+AGG - chr1_1:17363078-17363097 None:intergenic 30.0%
! TATCAGGGATTTCTAAAGAA+CGG - chr1_1:17363131-17363150 None:intergenic 30.0%
!!! AATCCCTGATACTTTTTTTG+AGG + chr1_1:17363140-17363159 Msa0011500:CDS 30.0%
!!! ATCCCTGATACTTTTTTTGA+GGG + chr1_1:17363141-17363160 Msa0011500:CDS 30.0%
!! TACCCTCAAAAAAAGTATCA+GGG - chr1_1:17363146-17363165 None:intergenic 30.0%
!! ATACCCTCAAAAAAAGTATC+AGG - chr1_1:17363147-17363166 None:intergenic 30.0%
GTGTTAAATTTAGCACTCTA+AGG - chr1_1:17363176-17363195 None:intergenic 30.0%
! TCAATGCATTCTGGAAAATA+TGG + chr1_1:17363263-17363282 Msa0011500:CDS 30.0%
! CAATGCATTCTGGAAAATAT+GGG + chr1_1:17363264-17363283 Msa0011500:CDS 30.0%
CATATCAAGCTTGACTAAAT+TGG + chr1_1:17363431-17363450 Msa0011500:CDS 30.0%
!! AATTCTAGAACTGTCAAGTT+GGG - chr1_1:17363552-17363571 None:intergenic 30.0%
!! TAATTCTAGAACTGTCAAGT+TGG - chr1_1:17363553-17363572 None:intergenic 30.0%
AATTACAAATTCGTGAGACT+TGG + chr1_1:17363568-17363587 Msa0011500:CDS 30.0%
AAATAGCTATTGGAGATGTA+TGG + chr1_1:17363640-17363659 Msa0011500:CDS 30.0%
AATAGCTATTGGAGATGTAT+GGG + chr1_1:17363641-17363660 Msa0011500:CDS 30.0%
AAAACATTGATGCTCAAACT+TGG + chr1_1:17363693-17363712 Msa0011500:CDS 30.0%
! ACTAATATACATTTGGAGCA+TGG + chr1_1:17363717-17363736 Msa0011500:CDS 30.0%
CTTTATCAACTAAATGGGAA+AGG + chr1_1:17363807-17363826 Msa0011500:CDS 30.0%
! CAACCTTCAATTACTTCTTT+TGG + chr1_1:17363984-17364003 Msa0011500:CDS 30.0%
TCTATGAAGGAGATATTGTT+CGG + chr1_1:17364119-17364138 Msa0011500:CDS 30.0%
AAGATGCGATAAATAATCAG+AGG - chr1_1:17364249-17364268 None:intergenic 30.0%
TTTATCGCATCTTAGAAGTA+AGG + chr1_1:17364256-17364275 Msa0011500:CDS 30.0%
!! AGAAGTAAGGAAAAGTATCA+AGG + chr1_1:17364269-17364288 Msa0011500:CDS 30.0%
CTAACATAAATCATCACTGA+AGG - chr1_1:17364796-17364815 None:intergenic 30.0%
AAACTTTCAACCAAAGTAGA+GGG - chr1_1:17364972-17364991 None:intergenic 30.0%
AAAACTTTCAACCAAAGTAG+AGG - chr1_1:17364973-17364992 None:intergenic 30.0%
GTGGCTATTTATGAATTCAT+AGG + chr1_1:17365139-17365158 Msa0011500:intron 30.0%
GAAAGTCATATTGAAGGATA+TGG + chr1_1:17365181-17365200 Msa0011500:CDS 30.0%
GAACAATTGCAAGAAAATTG+TGG + chr1_1:17365259-17365278 Msa0011500:CDS 30.0%
ATATAATGAGCTTGAGAAGT+TGG + chr1_1:17365310-17365329 Msa0011500:CDS 30.0%
CAATGAAAATAACAGTGTAG+AGG + chr1_1:17365379-17365398 Msa0011500:CDS 30.0%
ACACTATTTATCCTCAAAGA+TGG - chr1_1:17365956-17365975 None:intergenic 30.0%
!!! CCTTCACTATTTTTGGGTTT+TGG - chr1_1:17360546-17360565 None:intergenic 35.0%
CCAAAACCCAAAAATAGTGA+AGG + chr1_1:17360543-17360562 Msa0011500:five_prime_UTR 35.0%
ATTGGAGTTTCTTCAACAAG+TGG + chr1_1:17360620-17360639 Msa0011500:five_prime_UTR 35.0%
TAACTTCTTATGTGACTACG+GGG + chr1_1:17361017-17361036 Msa0011500:intron 35.0%
CTCTCAAAAACAAAATGCCT+AGG + chr1_1:17361077-17361096 Msa0011500:intron 35.0%
ATCATAATTATGCAAGGACC+CGG + chr1_1:17361133-17361152 Msa0011500:intron 35.0%
GATGAGGGAAAAAGAAACAA+GGG - chr1_1:17361444-17361463 None:intergenic 35.0%
AGATGAGGGAAAAAGAAACA+AGG - chr1_1:17361445-17361464 None:intergenic 35.0%
TGATTCAAGTCACAAGGAAA+AGG + chr1_1:17361493-17361512 Msa0011500:five_prime_UTR 35.0%
GAATATACCATTGTGCCTAT+TGG + chr1_1:17361569-17361588 Msa0011500:CDS 35.0%
AGGTAACTTCAAGACGTTAA+AGG + chr1_1:17361622-17361641 Msa0011500:CDS 35.0%
TCCATTTGGTTGAAAGAGAA+AGG + chr1_1:17361684-17361703 Msa0011500:CDS 35.0%
CCATTTGGTTGAAAGAGAAA+GGG + chr1_1:17361685-17361704 Msa0011500:CDS 35.0%
CATTTGGTTGAAAGAGAAAG+GGG + chr1_1:17361686-17361705 Msa0011500:CDS 35.0%
AATGCTGAGCAACTAACATT+GGG - chr1_1:17361809-17361828 None:intergenic 35.0%
! TGATGACGTAAAACCAAGTT+GGG - chr1_1:17361839-17361858 None:intergenic 35.0%
!! TTGATGACGTAAAACCAAGT+TGG - chr1_1:17361840-17361859 None:intergenic 35.0%
CATTTCACCATCTATTGTTG+AGG - chr1_1:17361969-17361988 None:intergenic 35.0%
ATGGTGAAATGTATGACACA+AGG + chr1_1:17361978-17361997 Msa0011500:CDS 35.0%
TGGTGAAATGTATGACACAA+GGG + chr1_1:17361979-17361998 Msa0011500:CDS 35.0%
ATTCTACTTCATGCAGCATT+GGG + chr1_1:17362038-17362057 Msa0011500:CDS 35.0%
ATCGAACAACTTATGTTCCA+TGG - chr1_1:17362122-17362141 None:intergenic 35.0%
TTCAAAGAGGAGACTATTCT+TGG + chr1_1:17362223-17362242 Msa0011500:CDS 35.0%
CCATCTTGATTCTTTGTCTT+AGG - chr1_1:17362261-17362280 None:intergenic 35.0%
CCTAAGACAAAGAATCAAGA+TGG + chr1_1:17362258-17362277 Msa0011500:CDS 35.0%
!! TCAAGATGTGTTGCTTCAAA+TGG + chr1_1:17362396-17362415 Msa0011500:CDS 35.0%
! ATCTTGTTTCAATCTATGGC+AGG + chr1_1:17362475-17362494 Msa0011500:CDS 35.0%
! AGGCAAACCTTCACATTTTT+GGG - chr1_1:17362548-17362567 None:intergenic 35.0%
CACGTGCAATGAAAAATAAG+AGG + chr1_1:17362587-17362606 Msa0011500:CDS 35.0%
TCAATGCATCTTTCCAAGAT+TGG - chr1_1:17362618-17362637 None:intergenic 35.0%
AATCTTGGAAAGATGCATTG+AGG + chr1_1:17362617-17362636 Msa0011500:CDS 35.0%
TGAGTTACAAATCATTGGAG+AGG + chr1_1:17362698-17362717 Msa0011500:CDS 35.0%
GAGTTACAAATCATTGGAGA+GGG + chr1_1:17362699-17362718 Msa0011500:CDS 35.0%
!!! TTGCTTTTTGCATTACTGCT+AGG + chr1_1:17362742-17362761 Msa0011500:CDS 35.0%
GTACTTTCTCAAAGTTGCAA+TGG + chr1_1:17362777-17362796 Msa0011500:CDS 35.0%
ACTTTCTCAAAGTTGCAATG+GGG + chr1_1:17362779-17362798 Msa0011500:CDS 35.0%
! TCTGTTTCTTGCATCATCTA+TGG - chr1_1:17362830-17362849 None:intergenic 35.0%
AACTTCAAGCAAAAGACAAG+TGG - chr1_1:17362881-17362900 None:intergenic 35.0%
CACGAACAAAATCATGCATT+TGG - chr1_1:17362921-17362940 None:intergenic 35.0%
TCTAAGAAAACAAGCTGATG+AGG + chr1_1:17362981-17363000 Msa0011500:CDS 35.0%
TATCATTACCCACATCGTTT+AGG + chr1_1:17363208-17363227 Msa0011500:CDS 35.0%
GTTAGTAACCTAAACGATGT+GGG - chr1_1:17363219-17363238 None:intergenic 35.0%
TGTTAGTAACCTAAACGATG+TGG - chr1_1:17363220-17363239 None:intergenic 35.0%
AGACCTTCAAACATTGTGTT+TGG + chr1_1:17363239-17363258 Msa0011500:CDS 35.0%
GATCCAAACACAATGTTTGA+AGG - chr1_1:17363245-17363264 None:intergenic 35.0%
! ATCAAGTTGCCAAGAGTAAT+AGG + chr1_1:17363342-17363361 Msa0011500:CDS 35.0%
! TCAAGTTGCCAAGAGTAATA+GGG + chr1_1:17363343-17363362 Msa0011500:CDS 35.0%
ATCAATCTCCCTATTACTCT+TGG - chr1_1:17363354-17363373 None:intergenic 35.0%
! ATGCTTGATTTGAGTCATTC+AGG + chr1_1:17363384-17363403 Msa0011500:CDS 35.0%
TTTGAGTCATTCAGGAATAG+AGG + chr1_1:17363392-17363411 Msa0011500:CDS 35.0%
GTCAAGCTTGATATGATGTT+GGG - chr1_1:17363426-17363445 None:intergenic 35.0%
AGTCAAGCTTGATATGATGT+TGG - chr1_1:17363427-17363446 None:intergenic 35.0%
ATCAAGCTTGACTAAATTGG+AGG + chr1_1:17363434-17363453 Msa0011500:CDS 35.0%
TAAATTGGAGGAGTTGTACA+TGG + chr1_1:17363446-17363465 Msa0011500:CDS 35.0%
AAATTGGAGGAGTTGTACAT+GGG + chr1_1:17363447-17363466 Msa0011500:CDS 35.0%
TGGGAAATACCTCTATTACT+TGG + chr1_1:17363466-17363485 Msa0011500:CDS 35.0%
GGGAAATACCTCTATTACTT+GGG + chr1_1:17363467-17363486 Msa0011500:CDS 35.0%
TTGGGAAGATGTGAATTCAA+CGG + chr1_1:17363485-17363504 Msa0011500:CDS 35.0%
!! AGGTGTTGAGAATTTGTACT+TGG + chr1_1:17363758-17363777 Msa0011500:CDS 35.0%
TTGTACTTGGATGATGTAGA+TGG + chr1_1:17363771-17363790 Msa0011500:CDS 35.0%
! GCTTCAAGTGTGCATTATTT+TGG - chr1_1:17363860-17363879 None:intergenic 35.0%
! AAATTGTGGACTGTAAAGAG+AGG + chr1_1:17363880-17363899 Msa0011500:CDS 35.0%
! AAGAAGTACAAGTGTTTCCA+AGG - chr1_1:17363931-17363950 None:intergenic 35.0%
AACTTGGAGCATATTTGTCA+TGG + chr1_1:17363960-17363979 Msa0011500:CDS 35.0%
ATATCTATTCTCCTATGGAG+TGG + chr1_1:17364049-17364068 Msa0011500:CDS 35.0%
AAGTTGTTTAACCACTCCAT+AGG - chr1_1:17364063-17364082 None:intergenic 35.0%
TTGTGAGTGCAATTCTATGA+AGG + chr1_1:17364106-17364125 Msa0011500:CDS 35.0%
! AAAAATGGTGTAGAAGCGTA+AGG - chr1_1:17364302-17364321 None:intergenic 35.0%
!! TACACCATTTTTCAATGCTC+AGG + chr1_1:17364310-17364329 Msa0011500:CDS 35.0%
!! CATACCTGAGCATTGAAAAA+TGG - chr1_1:17364317-17364336 None:intergenic 35.0%
GTAGGTTGCATTTCCTAATT+TGG + chr1_1:17364827-17364846 Msa0011500:intron 35.0%
GAGAAGTGAGCTCAATTTAA+GGG - chr1_1:17364856-17364875 None:intergenic 35.0%
TGAGAAGTGAGCTCAATTTA+AGG - chr1_1:17364857-17364876 None:intergenic 35.0%
AGCTTGATTGTGGATAATTG+TGG + chr1_1:17364927-17364946 Msa0011500:CDS 35.0%
TTGATTGTGGATAATTGTGG+TGG + chr1_1:17364930-17364949 Msa0011500:CDS 35.0%
GTATTTATTCCCCTCTACTT+TGG + chr1_1:17364959-17364978 Msa0011500:CDS 35.0%
AACTTTCAACCAAAGTAGAG+GGG - chr1_1:17364971-17364990 None:intergenic 35.0%
AAGTAATTGCTCTTTGATGG+AGG + chr1_1:17365016-17365035 Msa0011500:CDS 35.0%
AGATGACAGAAACAATGCAT+TGG + chr1_1:17365052-17365071 Msa0011500:CDS 35.0%
TGGACAACTTGAAGACAATA+TGG + chr1_1:17365201-17365220 Msa0011500:CDS 35.0%
CAATTGCAAGAAAATTGTGG+TGG + chr1_1:17365262-17365281 Msa0011500:CDS 35.0%
! TATGTGTTTTGCACTGAAGA+AGG - chr1_1:17365293-17365312 None:intergenic 35.0%
GGATACATCACATTTGATAG+AGG + chr1_1:17365400-17365419 Msa0011500:CDS 35.0%
! ATTTTTGCAGAGGAGAAACT+TGG + chr1_1:17365617-17365636 Msa0011500:CDS 35.0%
! ATTTTTGCAGAGGAGAAACT+TGG + chr1_1:17365617-17365636 Msa0011500:CDS 35.0%
GCATAGAAACCATTGAGTTT+AGG - chr1_1:17365911-17365930 None:intergenic 35.0%
AAACTCAATGGTTTCTATGC+TGG + chr1_1:17365911-17365930 Msa0011500:CDS 35.0%
! TTGAATTTGTTCAGAACTCC+AGG + chr1_1:17365992-17366011 Msa0011500:CDS 35.0%
AAGACAATGAGCTTGAGCAA+AGG - chr1_1:17360412-17360431 None:intergenic 40.0%
ACCTGCTGGATTATGCAATT+TGG - chr1_1:17360777-17360796 None:intergenic 40.0%
GGAGAAGCAAAGAAAACCAA+TGG + chr1_1:17361514-17361533 Msa0011500:exon 40.0%
!! TAACTTGCTTGACGTCCAAT+AGG - chr1_1:17361587-17361606 None:intergenic 40.0%
!! AAGAGAAAGAGTGCTCCATT+TGG + chr1_1:17361670-17361689 Msa0011500:CDS 40.0%
CCCTTTCTCTTTCAACCAAA+TGG - chr1_1:17361688-17361707 None:intergenic 40.0%
GTTGAAAGAGAAAGGGGAAA+TGG + chr1_1:17361692-17361711 Msa0011500:CDS 40.0%
CAATGCTGAGCAACTAACAT+TGG - chr1_1:17361810-17361829 None:intergenic 40.0%
GATGACGTAAAACCAAGTTG+GGG - chr1_1:17361838-17361857 None:intergenic 40.0%
AGGAGGCTACTATATCTAGA+GGG - chr1_1:17361946-17361965 None:intergenic 40.0%
TTCACCATCTATTGTTGAGG+AGG - chr1_1:17361966-17361985 None:intergenic 40.0%
GATTCTACTTCATGCAGCAT+TGG + chr1_1:17362037-17362056 Msa0011500:CDS 40.0%
TTCTACTTCATGCAGCATTG+GGG + chr1_1:17362039-17362058 Msa0011500:CDS 40.0%
ACATAAGTTGTTCGATAGCG+TGG + chr1_1:17362126-17362145 Msa0011500:CDS 40.0%
AAAACAGTGGGGATTCCATT+TGG + chr1_1:17362331-17362350 Msa0011500:CDS 40.0%
!! CATTTTTGGGCCACTTGATA+TGG - chr1_1:17362535-17362554 None:intergenic 40.0%
! GAGGCAAACCTTCACATTTT+TGG - chr1_1:17362549-17362568 None:intergenic 40.0%
AATGTGAAGGTTTGCCTCTT+AGG + chr1_1:17362551-17362570 Msa0011500:CDS 40.0%
ATGTGAAGGTTTGCCTCTTA+GGG + chr1_1:17362552-17362571 Msa0011500:CDS 40.0%
ATAAGAGGGATGTCCAATCT+TGG + chr1_1:17362602-17362621 Msa0011500:CDS 40.0%
ATTGGAGAGGGATGAAATGA+GGG + chr1_1:17362711-17362730 Msa0011500:CDS 40.0%
! TTTGCTATCTTCATAGCACG+TGG + chr1_1:17362943-17362962 Msa0011500:CDS 40.0%
TTGCTATCTTCATAGCACGT+GGG + chr1_1:17362944-17362963 Msa0011500:CDS 40.0%
GTGTTTGGATCAATGCATTC+TGG + chr1_1:17363254-17363273 Msa0011500:CDS 40.0%
AGCTTGATATGATGTTGGGT+GGG - chr1_1:17363422-17363441 None:intergenic 40.0%
AAGCTTGATATGATGTTGGG+TGG - chr1_1:17363423-17363442 None:intergenic 40.0%
CACATCTTCCCAAGTAATAG+AGG - chr1_1:17363478-17363497 None:intergenic 40.0%
AACACTAATTGCAAGTCCCT+TGG - chr1_1:17363600-17363619 None:intergenic 40.0%
ACGTGGAGATGTTTCAGAAA+TGG - chr1_1:17363837-17363856 None:intergenic 40.0%
!!! AGTGTGCATTATTTTGGACG+TGG - chr1_1:17363854-17363873 None:intergenic 40.0%
TGCACACTTGAAGCAAATTG+TGG + chr1_1:17363866-17363885 Msa0011500:CDS 40.0%
AGTACAAGTGTTTCCAAGGA+GGG - chr1_1:17363927-17363946 None:intergenic 40.0%
AAGTACAAGTGTTTCCAAGG+AGG - chr1_1:17363928-17363947 None:intergenic 40.0%
!! CAACTTGACTAGCTTGATTG+TGG + chr1_1:17364917-17364936 Msa0011500:CDS 40.0%
CAGAAACAATGCATTGGAAG+AGG + chr1_1:17365058-17365077 Msa0011500:CDS 40.0%
TAATGAGCTTGAGAAGTTGG+AGG + chr1_1:17365313-17365332 Msa0011500:CDS 40.0%
ATATGGAGTAGAGATCCTGA+AGG + chr1_1:17365455-17365474 Msa0011500:CDS 40.0%
GGGAATAGATACTTCAAGCT+TGG - chr1_1:17365527-17365546 None:intergenic 40.0%
! CATGGAGGAAATTTTTGCAG+AGG + chr1_1:17365607-17365626 Msa0011500:CDS 40.0%
! CATGGAGGAAATTTTTGCAG+AGG + chr1_1:17365607-17365626 Msa0011500:CDS 40.0%
TATGGAGGAAATTGTTGCAG+AGG + chr1_1:17365709-17365728 Msa0011500:CDS 40.0%
ATTGTTGCAGAGGAGAAACT+TGG + chr1_1:17365719-17365738 Msa0011500:CDS 40.0%
TGGCACTTACCTAAACTCAA+TGG + chr1_1:17365899-17365918 Msa0011500:CDS 40.0%
GCCAAATTGCATAATCCAGC+AGG + chr1_1:17360773-17360792 Msa0011500:five_prime_UTR 45.0%
TTGACGTCCAATAGGCACAA+TGG - chr1_1:17361579-17361598 None:intergenic 45.0%
GGATCACGTTGAAAACCTTG+AGG + chr1_1:17361643-17361662 Msa0011500:CDS 45.0%
TTGGTTGGAGAAAGTGAACG+AGG + chr1_1:17361742-17361761 Msa0011500:CDS 45.0%
CTACTATATCTAGAGGGGGA+AGG - chr1_1:17361940-17361959 None:intergenic 45.0%
GAGGCTACTATATCTAGAGG+GGG - chr1_1:17361944-17361963 None:intergenic 45.0%
GGAGGCTACTATATCTAGAG+GGG - chr1_1:17361945-17361964 None:intergenic 45.0%
GAGGAGGCTACTATATCTAG+AGG - chr1_1:17361947-17361966 None:intergenic 45.0%
ACCATCTATTGTTGAGGAGG+AGG - chr1_1:17361963-17361982 None:intergenic 45.0%
GCTTAAGGAGGACATTGTGA+AGG + chr1_1:17362006-17362025 Msa0011500:CDS 45.0%
GAAAGTTGCTCAAACAGCCA+TGG + chr1_1:17362102-17362121 Msa0011500:CDS 45.0%
AGAGGAGATTGCAGACTTCT+TGG + chr1_1:17362192-17362211 Msa0011500:CDS 45.0%
GAGGAGATTGCAGACTTCTT+GGG + chr1_1:17362193-17362212 Msa0011500:CDS 45.0%
GCTTCAAATGGATGTGCCAA+TGG + chr1_1:17362408-17362427 Msa0011500:CDS 45.0%
TCAATCTATGGCAGGAGATG+CGG + chr1_1:17362483-17362502 Msa0011500:CDS 45.0%
CAAGTGGCCCAAAAATGTGA+AGG + chr1_1:17362538-17362557 Msa0011500:CDS 45.0%
CATTGGAGAGGGATGAAATG+AGG + chr1_1:17362710-17362729 Msa0011500:CDS 45.0%
TCTCAAAGTTGCAATGGGGT+TGG + chr1_1:17362783-17362802 Msa0011500:CDS 45.0%
TGCTATCTTCATAGCACGTG+GGG + chr1_1:17362945-17362964 Msa0011500:CDS 45.0%
TTTGAGGAAGCTCGTGCATA+CGG - chr1_1:17363062-17363081 None:intergenic 45.0%
TGAGACTTGGATGTTGCCAA+GGG + chr1_1:17363581-17363600 Msa0011500:CDS 45.0%
CTATTGGAGATGTATGGGAC+TGG + chr1_1:17363646-17363665 Msa0011500:CDS 45.0%
AAGTGTTTCCAAGGAGGGAA+AGG - chr1_1:17363922-17363941 None:intergenic 45.0%
TGCTCACATCTCAAGGAACT+TGG + chr1_1:17365566-17365585 Msa0011500:CDS 45.0%
ACTGTTGCAGAGGAGAAACT+TGG + chr1_1:17365770-17365789 Msa0011500:CDS 45.0%
TGTGCAGGAAATTGTTGCAG+AGG + chr1_1:17365811-17365830 Msa0011500:CDS 45.0%
AGCATGGACATCTTACCTGC+TGG - chr1_1:17360791-17360810 None:intergenic 50.0%
CTCTTTCTCTTGCAGCCTCA+AGG - chr1_1:17361661-17361680 None:intergenic 50.0%
CAACTAACATTGGGACGACG+AGG - chr1_1:17361800-17361819 None:intergenic 50.0%
AGCATTGTCGTTCCCCAACT+TGG + chr1_1:17361823-17361842 Msa0011500:CDS 50.0%
GCCTCCTCCTCAACAATAGA+TGG + chr1_1:17361959-17361978 Msa0011500:CDS 50.0%
TGACACAAGGGAGTCGCTTA+AGG + chr1_1:17361991-17362010 Msa0011500:CDS 50.0%
! TCATGCAGCATTGGGGTCTA+TGG + chr1_1:17362046-17362065 Msa0011500:CDS 50.0%
! CATGCAGCATTGGGGTCTAT+GGG + chr1_1:17362047-17362066 Msa0011500:CDS 50.0%
! AGCATTGGGGTCTATGGGTT+GGG + chr1_1:17362052-17362071 Msa0011500:CDS 50.0%
AGCAACTTTCTGCACCAGAG+TGG - chr1_1:17362092-17362111 None:intergenic 50.0%
CTTGGGTCTGCGATTCAAAG+AGG + chr1_1:17362210-17362229 Msa0011500:CDS 50.0%
GCTACTGTCACTACCCTAAG+AGG - chr1_1:17362568-17362587 None:intergenic 50.0%
AAGGTGCACGCAAATCGTTC+TGG + chr1_1:17363029-17363048 Msa0011500:CDS 50.0%
GTGAGACTTGGATGTTGCCA+AGG + chr1_1:17363580-17363599 Msa0011500:CDS 50.0%
CAATGTGTCCTTTCCCTCCT+TGG + chr1_1:17363911-17363930 Msa0011500:CDS 50.0%
AACGAGTGGCTACAGAGAGT+GGG - chr1_1:17365547-17365566 None:intergenic 50.0%
CTTGAGATGTGAGCAACGAG+TGG - chr1_1:17365561-17365580 None:intergenic 50.0%
CACTCGTTGCTCACATCTCA+AGG + chr1_1:17365559-17365578 Msa0011500:CDS 50.0%
CATGGAGGAAACTGTTGCAG+AGG + chr1_1:17365760-17365779 Msa0011500:CDS 50.0%
CTCTGCTGTGTCCATCTTTG+AGG + chr1_1:17365942-17365961 Msa0011500:CDS 50.0%
CACAAGGGAGTCGCTTAAGG+AGG + chr1_1:17361994-17362013 Msa0011500:CDS 55.0%
! CAGCATTGGGGTCTATGGGT+TGG + chr1_1:17362051-17362070 Msa0011500:CDS 55.0%
!! ATTGGGGTCTATGGGTTGGG+TGG + chr1_1:17362055-17362074 Msa0011500:CDS 55.0%
!! TTGGGGTCTATGGGTTGGGT+GGG + chr1_1:17362056-17362075 Msa0011500:CDS 55.0%
CAACGAGTGGCTACAGAGAG+TGG - chr1_1:17365548-17365567 None:intergenic 55.0%
!! TGGGGTCTATGGGTTGGGTG+GGG + chr1_1:17362057-17362076 Msa0011500:CDS 60.0%
!! GTCTATGGGTTGGGTGGGGT+GGG + chr1_1:17362061-17362080 Msa0011500:CDS 60.0%
TGGGGTGGGTAAGACCACTC+TGG + chr1_1:17362075-17362094 Msa0011500:CDS 60.0%
!! GGTCTATGGGTTGGGTGGGG+TGG + chr1_1:17362060-17362079 Msa0011500:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 17360378 17366030 17360378 ID=Msa0011500;Name=Msa0011500
chr1_1 mRNA 17360378 17366030 17360378 ID=Msa0011500-mRNA-1;Parent=Msa0011500;Name=Msa0011500-mRNA-1;_AED=0.03;_eAED=0.03;_QI=356|1|0.6|1|0.75|0.8|5|0|1305
chr1_1 exon 17360378 17360641 17360378 ID=Msa0011500-mRNA-1:exon:6288;Parent=Msa0011500-mRNA-1
chr1_1 exon 17360747 17360794 17360747 ID=Msa0011500-mRNA-1:exon:6289;Parent=Msa0011500-mRNA-1
chr1_1 exon 17361489 17364331 17361489 ID=Msa0011500-mRNA-1:exon:6290;Parent=Msa0011500-mRNA-1
chr1_1 exon 17364831 17365079 17364831 ID=Msa0011500-mRNA-1:exon:6291;Parent=Msa0011500-mRNA-1
chr1_1 exon 17365161 17366030 17365161 ID=Msa0011500-mRNA-1:exon:6292;Parent=Msa0011500-mRNA-1
chr1_1 five_prime_UTR 17360378 17360641 17360378 ID=Msa0011500-mRNA-1:five_prime_utr;Parent=Msa0011500-mRNA-1
chr1_1 five_prime_UTR 17360747 17360794 17360747 ID=Msa0011500-mRNA-1:five_prime_utr;Parent=Msa0011500-mRNA-1
chr1_1 five_prime_UTR 17361489 17361532 17361489 ID=Msa0011500-mRNA-1:five_prime_utr;Parent=Msa0011500-mRNA-1
chr1_1 CDS 17361533 17364331 17361533 ID=Msa0011500-mRNA-1:cds;Parent=Msa0011500-mRNA-1
chr1_1 CDS 17364831 17365079 17364831 ID=Msa0011500-mRNA-1:cds;Parent=Msa0011500-mRNA-1
chr1_1 CDS 17365161 17366030 17365161 ID=Msa0011500-mRNA-1:cds;Parent=Msa0011500-mRNA-1
Gene Sequence

>Msa0011500

ATGGAAATTTTAACTTCTGTTGTTGGAAAAATAGCAGAATATACCATTGTGCCTATTGGACGTCAAGCAAGTTACTTGATATTCTACAAAGGTAACTTCAAGACGTTAAAGGATCACGTTGAAAACCTTGAGGCTGCAAGAGAAAGAGTGCTCCATTTGGTTGAAAGAGAAAGGGGAAATGGTAATGAAATTGAAAAAGATGTTCTAAATTGGTTGGAGAAAGTGAACGAGGTCATAAAAAAAGCGAATTGGCTTCAAAATGATCCTCGTCGTCCCAATGTTAGTTGCTCAGCATTGTCGTTCCCCAACTTGGTTTTACGTCATCAACTAAGTAGGAAAGCCACAAAAATTGCAAAAGATGTTGTTAAAGTTCAAGGAAAAGGGATTTTTGATCAAGTTGGTCACCTTCCCCCTCTAGATATAGTAGCCTCCTCCTCAACAATAGATGGTGAAATGTATGACACAAGGGAGTCGCTTAAGGAGGACATTGTGAAGGCTTTAGCAGATTCTACTTCATGCAGCATTGGGGTCTATGGGTTGGGTGGGGTGGGTAAGACCACTCTGGTGCAGAAAGTTGCTCAAACAGCCATGGAACATAAGTTGTTCGATAGCGTGGTTATGACTAAAGTATCAAATAATCCAGACATTAAAAGAATTCAAGAGGAGATTGCAGACTTCTTGGGTCTGCGATTCAAAGAGGAGACTATTCTTGGCAGAGAACATCGCCTAAGACAAAGAATCAAGATGGAGAAAAGTATCCTTATCATTCTAGATAACATATGGACCATACTTGATTTGAAAACAGTGGGGATTCCATTTGGTAATGAACATAATGGTTGCAAATTGTTGATGACAAGTAGAAATCAAGATGTGTTGCTTCAAATGGATGTGCCAATGGATTTCACTTTCAAAGTTGAACTTATGAATGAAAATGAGGCATGGATCTTGTTTCAATCTATGGCAGGAGATGCGGTTAAAGATAGCAATTTGAAAGATATACCATATCAAGTGGCCCAAAAATGTGAAGGTTTGCCTCTTAGGGTAGTGACAGTAGCACGTGCAATGAAAAATAAGAGGGATGTCCAATCTTGGAAAGATGCATTGAGGAAATTACAAAGTAATGATCATACAGAGATGGATGCAATAACTTATTCTGCTTTGGAATTGAGTTACAAATCATTGGAGAGGGATGAAATGAGGGATTTGTTCTTGCTTTTTGCATTACTGCTAGGTAATGATATAGAGTACTTTCTCAAAGTTGCAATGGGGTTGGACATATTGAAGCATGTTAATGCCATAGATGATGCAAGAAACAGACTTTACACAATAATCAAATCTTTGGAGGCCACTTGTCTTTTGCTTGAAGTTAAAATAGGTGGAAAGATCCAAATGCATGATTTTGTTCGTGATTTTGCTATCTTCATAGCACGTGGGGACAAACATGTACTTCTAAGAAAACAAGCTGATGAGGAATTGCCAACCAATGATTTTCTAAAAAGGTGCACGCAAATCGTTCTGGATAGATGCCGTATGCACGAGCTTCCTCAAACGATTTATTGTCCAAACATTAAGTTTTTCTTCTTGTACAATGTGAACCGTTCTTTAGAAATCCCTGATACTTTTTTTGAGGGTATGAGAAGCCTTAGAGTGCTAAATTTAACACACTTGAACTTGTTATCATTACCCACATCGTTTAGGTTACTAACAGACCTTCAAACATTGTGTTTGGATCAATGCATTCTGGAAAATATGGGTGCACTAGAAGCTTTGCAAAATTTAGAAATTCTTTCCCTTTGTAAATCTTCAATAATCAAGTTGCCAAGAGTAATAGGGAGATTGATTCAATTGAGAATGCTTGATTTGAGTCATTCAGGAATAGAGGTAGTCCCACCCAACATCATATCAAGCTTGACTAAATTGGAGGAGTTGTACATGGGAAATACCTCTATTACTTGGGAAGATGTGAATTCAACGGTTCTAAATGAAAATGCTAGTCTTGCTGAGCTTCGAAAATTACCCAACTTGACAGTTCTAGAATTACAAATTCGTGAGACTTGGATGTTGCCAAGGGACTTGCAATTAGTGTTTGAGAAGCTTGAAAGATATAAAATAGCTATTGGAGATGTATGGGACTGGTCTGACATTATGCATAAACCCTTAAAAACATTGATGCTCAAACTTGGTACTAATATACATTTGGAGCATGGACTTAAAGTATTGATTAAAGGTGTTGAGAATTTGTACTTGGATGATGTAGATGGAATTCAAAATGTGCTTTATCAACTAAATGGGAAAGGATTTCCATTTCTGAAACATCTCCACGTCCAAAATAATGCACACTTGAAGCAAATTGTGGACTGTAAAGAGAGGAATCAAATCAATGTGTCCTTTCCCTCCTTGGAAACACTTGTACTTCTTAATCTTATAAACTTGGAGCATATTTGTCATGGTCAACCTTCAATTACTTCTTTTGGAAATCTCAGTGTTATCAAAGTCAAAAACTGCGTCCAATTAAAATATCTATTCTCCTATGGAGTGGTTAAACAACTTTCCCACATTTCTAAGATTGAAGTTTGTGAGTGCAATTCTATGAAGGAGATATTGTTCGGAGACAACAATTCAAGTGCAAACAATGATATCACTGATGAAAAAATTGAGTTTCTTCTATTGCGTTCTTTGACTTTAGAACATTTGGAAACACTTGATAATTTCGCCTCTGATTATTTATCGCATCTTAGAAGTAAGGAAAAGTATCAAGGTCTAGAGCCTTACGCTTCTACACCATTTTTCAATGCTCAGGTTGCATTTCCTAATTTGGATACCCTTAAATTGAGCTCACTTCTCAATTTGAATAAAGTTTGGGATGAGAATCATCAATCAATGTGCAACTTGACTAGCTTGATTGTGGATAATTGTGGTGGATTGAAGTATTTATTCCCCTCTACTTTGGTTGAAAGTTTTATGAACCTCAAACATCTTGAAATAAGTAATTGCTCTTTGATGGAGGAGATAATAACTAAAGATGACAGAAACAATGCATTGGAAGAGGTTCATTTTTTGAAATTAGAGAAAGTCATATTGAAGGATATGGACAACTTGAAGACAATATGGCATTACCAATTTAAAACATTGAAGATGTTGCAAGTGAACAATTGCAAGAAAATTGTGGTGGTTTTTCCTTCTTCAGTGCAAAACACATATAATGAGCTTGAGAAGTTGGAGGTTACAAATTGTGATTTAGTTGAAGAGATATTTGAATTGACTTTCAATGAAAATAACAGTGTAGAGGATACATCACATTTGATAGAGGTTATTATAGTTGGATTGTCGAATTTGAAAAAGATATGGAGTAGAGATCCTGAAGGAATTATTAGTTTTCAAGCTATTAATTATGTAATCATAAATGATTGTCCAAGCTTGAAGTATCTATTCCCACTCTCTGTAGCCACTCGTTGCTCACATCTCAAGGAACTTGGTATAAAAAATTGTGAAAACATGGAGGAAATTTTTGCAGAGGAGAAACTTGGTATAAAAAATTGTGAAAACATGGAGGAAATTTTTGCAGAGGAGAAACTTGGTATAAAAAATTGTGAAAATATGGAGGAAATTGTTGCAGAGGAGAAACTTGGTATAAAAAATTGTGAAAACATGGAGGAAACTGTTGCAGAGGAGAAACTTGGTATAATAAATTGTGAAAATGTGCAGGAAATTGTTGCAGAGGAGAAAGAATCTAGCATGAATGCAACTCCCATATTTGAGTTTAATCAACTAAGTACTTTATTTCTTTGGCACTTACCTAAACTCAATGGTTTCTATGCTGGAAGTCATACTCTGCTGTGTCCATCTTTGAGGATAAATAGTGTTTTTGAATGTACAAAGTTGAATTTGTTCAGAACTCCAGGCGCAAGAAGCATGTGA

Protein sequence

>Msa0011500

MEILTSVVGKIAEYTIVPIGRQASYLIFYKGNFKTLKDHVENLEAARERVLHLVERERGNGNEIEKDVLNWLEKVNEVIKKANWLQNDPRRPNVSCSALSFPNLVLRHQLSRKATKIAKDVVKVQGKGIFDQVGHLPPLDIVASSSTIDGEMYDTRESLKEDIVKALADSTSCSIGVYGLGGVGKTTLVQKVAQTAMEHKLFDSVVMTKVSNNPDIKRIQEEIADFLGLRFKEETILGREHRLRQRIKMEKSILIILDNIWTILDLKTVGIPFGNEHNGCKLLMTSRNQDVLLQMDVPMDFTFKVELMNENEAWILFQSMAGDAVKDSNLKDIPYQVAQKCEGLPLRVVTVARAMKNKRDVQSWKDALRKLQSNDHTEMDAITYSALELSYKSLERDEMRDLFLLFALLLGNDIEYFLKVAMGLDILKHVNAIDDARNRLYTIIKSLEATCLLLEVKIGGKIQMHDFVRDFAIFIARGDKHVLLRKQADEELPTNDFLKRCTQIVLDRCRMHELPQTIYCPNIKFFFLYNVNRSLEIPDTFFEGMRSLRVLNLTHLNLLSLPTSFRLLTDLQTLCLDQCILENMGALEALQNLEILSLCKSSIIKLPRVIGRLIQLRMLDLSHSGIEVVPPNIISSLTKLEELYMGNTSITWEDVNSTVLNENASLAELRKLPNLTVLELQIRETWMLPRDLQLVFEKLERYKIAIGDVWDWSDIMHKPLKTLMLKLGTNIHLEHGLKVLIKGVENLYLDDVDGIQNVLYQLNGKGFPFLKHLHVQNNAHLKQIVDCKERNQINVSFPSLETLVLLNLINLEHICHGQPSITSFGNLSVIKVKNCVQLKYLFSYGVVKQLSHISKIEVCECNSMKEILFGDNNSSANNDITDEKIEFLLLRSLTLEHLETLDNFASDYLSHLRSKEKYQGLEPYASTPFFNAQVAFPNLDTLKLSSLLNLNKVWDENHQSMCNLTSLIVDNCGGLKYLFPSTLVESFMNLKHLEISNCSLMEEIITKDDRNNALEEVHFLKLEKVILKDMDNLKTIWHYQFKTLKMLQVNNCKKIVVVFPSSVQNTYNELEKLEVTNCDLVEEIFELTFNENNSVEDTSHLIEVIIVGLSNLKKIWSRDPEGIISFQAINYVIINDCPSLKYLFPLSVATRCSHLKELGIKNCENMEEIFAEEKLGIKNCENMEEIFAEEKLGIKNCENMEEIVAEEKLGIKNCENMEETVAEEKLGIINCENVQEIVAEEKESSMNATPIFEFNQLSTLFLWHLPKLNGFYAGSHTLLCPSLRINSVFECTKLNLFRTPGARSM*