Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876660 | KEH25369.1 | 94.558 | 294 | 1 | 1 | 1 | 279 | 1 | 294 | 0.0 | 563 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876660 | sp|O82567|AAPT1_ARATH | 76.190 | 294 | 55 | 1 | 1 | 279 | 49 | 342 | 3.19e-168 | 474 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876660 | A0A072U6L5 | 94.558 | 294 | 1 | 1 | 1 | 279 | 1 | 294 | 0.0 | 563 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006070 | Msa0876660 | 0.810163 | 1.321323e-50 | -8.615850e-47 |
| Msa0012530 | Msa0876660 | 0.806440 | 8.219118e-50 | -8.615850e-47 |
| Msa0017510 | Msa0876660 | 0.855165 | 7.574640e-62 | -8.615850e-47 |
| Msa0028640 | Msa0876660 | 0.815529 | 8.822506e-52 | -8.615850e-47 |
| Msa0034270 | Msa0876660 | 0.801392 | 9.203205e-49 | -8.615850e-47 |
| Msa0089630 | Msa0876660 | 0.800554 | 1.364592e-48 | -8.615850e-47 |
| Msa0094120 | Msa0876660 | 0.802028 | 6.814796e-49 | -8.615850e-47 |
| Msa0110970 | Msa0876660 | 0.815545 | 8.753037e-52 | -8.615850e-47 |
| Msa0115000 | Msa0876660 | 0.802923 | 4.455861e-49 | -8.615850e-47 |
| Msa0116770 | Msa0876660 | 0.822726 | 2.029872e-53 | -8.615850e-47 |
| Msa0606860 | Msa0876660 | 0.802467 | 5.534626e-49 | -8.615850e-47 |
| Msa0657970 | Msa0876660 | 0.839294 | 1.726583e-57 | -8.615850e-47 |
| Msa0708520 | Msa0876660 | 0.804446 | 2.151373e-49 | -8.615850e-47 |
| Msa0745790 | Msa0876660 | 0.817702 | 2.875429e-52 | -8.615850e-47 |
| Msa0777230 | Msa0876660 | 0.804860 | 1.763974e-49 | -8.615850e-47 |
| Msa0145440 | Msa0876660 | 0.805438 | 1.334745e-49 | -8.615850e-47 |
| Msa0157290 | Msa0876660 | 0.854677 | 1.049496e-61 | -8.615850e-47 |
| Msa0160130 | Msa0876660 | 0.801281 | 9.697844e-49 | -8.615850e-47 |
| Msa0165210 | Msa0876660 | 0.823641 | 1.241788e-53 | -8.615850e-47 |
| Msa0165220 | Msa0876660 | 0.807924 | 3.985231e-50 | -8.615850e-47 |
| Msa0175780 | Msa0876660 | 0.813916 | 2.009141e-51 | -8.615850e-47 |
| Msa0184020 | Msa0876660 | 0.800115 | 1.676449e-48 | -8.615850e-47 |
| Msa0200260 | Msa0876660 | 0.802173 | 6.360476e-49 | -8.615850e-47 |
| Msa0223690 | Msa0876660 | 0.801690 | 7.992295e-49 | -8.615850e-47 |
| Msa0225320 | Msa0876660 | 0.838010 | 3.706908e-57 | -8.615850e-47 |
| Msa0225740 | Msa0876660 | 0.803664 | 3.130018e-49 | -8.615850e-47 |
| Msa0388960 | Msa0876660 | 0.828009 | 1.140973e-54 | -8.615850e-47 |
| Msa0419820 | Msa0876660 | 0.802250 | 6.133622e-49 | -8.615850e-47 |
| Msa0425400 | Msa0876660 | 0.808161 | 3.547710e-50 | -8.615850e-47 |
| Msa0436050 | Msa0876660 | 0.811629 | 6.361774e-51 | -8.615850e-47 |
| Msa0241640 | Msa0876660 | 0.800177 | 1.628634e-48 | -8.615850e-47 |
| Msa0248970 | Msa0876660 | 0.800985 | 1.114786e-48 | -8.615850e-47 |
| Msa0279790 | Msa0876660 | 0.812268 | 4.617368e-51 | -8.615850e-47 |
| Msa0284420 | Msa0876660 | 0.800329 | 1.516718e-48 | -8.615850e-47 |
| Msa0288100 | Msa0876660 | 0.812419 | 4.280636e-51 | -8.615850e-47 |
| Msa0306300 | Msa0876660 | 0.810560 | 1.084977e-50 | -8.615850e-47 |
| Msa0339320 | Msa0876660 | 0.800013 | 1.758443e-48 | -8.615850e-47 |
| Msa0350990 | Msa0876660 | 0.808506 | 2.995769e-50 | -8.615850e-47 |
| Msa0351030 | Msa0876660 | 0.806008 | 1.013381e-49 | -8.615850e-47 |
| Msa0351100 | Msa0876660 | 0.805658 | 1.200071e-49 | -8.615850e-47 |
| Msa0484780 | Msa0876660 | 0.815528 | 8.829992e-52 | -8.615850e-47 |
| Msa0569200 | Msa0876660 | 0.805876 | 1.080440e-49 | -8.615850e-47 |
| Msa0574890 | Msa0876660 | 0.815949 | 7.112878e-52 | -8.615850e-47 |
| Msa0593650 | Msa0876660 | 0.803684 | 3.099512e-49 | -8.615850e-47 |
| Msa0601290 | Msa0876660 | 0.801114 | 1.048885e-48 | -8.615850e-47 |
| Msa0601850 | Msa0876660 | 0.805773 | 1.135427e-49 | -8.615850e-47 |
| Msa0876660 | Msa0880140 | 0.855523 | 5.957907e-62 | -8.615850e-47 |
| Msa0876660 | Msa0896750 | 0.814635 | 1.393568e-51 | -8.615850e-47 |
| Msa0876660 | Msa0909120 | 0.814290 | 1.661180e-51 | -8.615850e-47 |
| Msa0876660 | Msa0936270 | 0.803400 | 3.549739e-49 | -8.615850e-47 |
| Msa0876660 | Msa0953550 | 0.811790 | 5.869650e-51 | -8.615850e-47 |
| Msa0876660 | Msa0954130 | 0.834987 | 2.180889e-56 | -8.615850e-47 |
| Msa0876660 | Msa0954550 | 0.810057 | 1.392750e-50 | -8.615850e-47 |
| Msa0876660 | Msa0979010 | 0.836395 | 9.594785e-57 | -8.615850e-47 |
| Msa0876660 | Msa0979730 | 0.800921 | 1.148451e-48 | -8.615850e-47 |
| Msa0876660 | Msa0990350 | 0.801961 | 7.033199e-49 | -8.615850e-47 |
| Msa0876660 | Msa1014540 | 0.819453 | 1.152191e-52 | -8.615850e-47 |
| Msa0876660 | Msa1079590 | 0.810194 | 1.301228e-50 | -8.615850e-47 |
| Msa0876660 | Msa1082500 | 0.837812 | 4.168522e-57 | -8.615850e-47 |
| Msa0876660 | Msa1085300 | 0.810793 | 9.658697e-51 | -8.615850e-47 |
| Msa0876660 | Msa1142020 | 0.801521 | 8.657419e-49 | -8.615850e-47 |
| Msa0876660 | Msa1151900 | 0.808284 | 3.340030e-50 | -8.615850e-47 |
| Msa0876660 | Msa1151910 | 0.816613 | 5.052803e-52 | -8.615850e-47 |
| Msa0876660 | Msa1165520 | 0.807382 | 5.193577e-50 | -8.615850e-47 |
| Msa0876660 | Msa1172670 | 0.803804 | 2.927453e-49 | -8.615850e-47 |
| Msa0876660 | Msa1186060 | 0.811387 | 7.183532e-51 | -8.615850e-47 |
| Msa0876660 | Msa1199220 | 0.801798 | 7.595867e-49 | -8.615850e-47 |
| Msa0876660 | Msa1238470 | 0.816333 | 5.837580e-52 | -8.615850e-47 |
| Msa0876660 | Msa1271290 | 0.801309 | 9.570747e-49 | -8.615850e-47 |
| Msa0876660 | Msa1271990 | 0.808769 | 2.631742e-50 | -8.615850e-47 |
| Msa0876660 | Msa1283860 | 0.820573 | 6.388180e-53 | -8.615850e-47 |
| Msa0876660 | Msa1308380 | 0.820935 | 5.271978e-53 | -8.615850e-47 |
| Msa0876660 | Msa1308580 | 0.803181 | 3.940101e-49 | -8.615850e-47 |
| Msa0876660 | Msa1308620 | 0.812782 | 3.564728e-51 | -8.615850e-47 |
| Msa0876660 | Msa1313150 | 0.828254 | 9.958668e-55 | -8.615850e-47 |
| Msa0876660 | Msa1402590 | 0.811124 | 8.190970e-51 | -8.615850e-47 |
| Msa0876660 | Msa1411020 | 0.804721 | 1.885419e-49 | -8.615850e-47 |
| Msa0876660 | Msa1423880 | 0.816704 | 4.821774e-52 | -8.615850e-47 |
| Msa0876660 | Msa1434350 | 0.800603 | 1.333963e-48 | -8.615850e-47 |
| Msa0876660 | Msa1439320 | 0.800566 | 1.357033e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876660 | MtrunA17_Chr6g0457871 | 94.558 | 294 | 1 | 1 | 1 | 279 | 55 | 348 | 0.0 | 562 |
| Msa0876660 | MtrunA17_Chr3g0079771 | 80.952 | 294 | 41 | 1 | 1 | 279 | 48 | 341 | 1.94e-157 | 444 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876660 | AT1G13560.3 | 76.190 | 294 | 55 | 1 | 1 | 279 | 1 | 294 | 2.26e-170 | 475 |
| Msa0876660 | AT1G13560.2 | 75.850 | 294 | 56 | 1 | 1 | 279 | 6 | 299 | 8.52e-170 | 474 |
| Msa0876660 | AT1G13560.1 | 76.190 | 294 | 55 | 1 | 1 | 279 | 49 | 342 | 3.25e-169 | 474 |
| Msa0876660 | AT3G25585.6 | 73.810 | 294 | 62 | 1 | 1 | 279 | 1 | 294 | 3.72e-161 | 452 |
| Msa0876660 | AT3G25585.5 | 73.810 | 294 | 62 | 1 | 1 | 279 | 1 | 294 | 3.72e-161 | 452 |
| Msa0876660 | AT3G25585.4 | 73.810 | 294 | 62 | 1 | 1 | 279 | 49 | 342 | 3.88e-160 | 451 |
| Msa0876660 | AT3G25585.1 | 73.810 | 294 | 62 | 1 | 1 | 279 | 49 | 342 | 3.88e-160 | 451 |
| Msa0876660 | AT3G25585.2 | 73.810 | 294 | 62 | 1 | 1 | 279 | 49 | 342 | 3.88e-160 | 451 |
| Msa0876660 | AT3G25585.3 | 73.448 | 290 | 62 | 1 | 5 | 279 | 1 | 290 | 1.67e-158 | 445 |
Find 99 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTTTGAAGCACTTGCTTT+TGG | 0.146979 | 6_1:+15008742 | Msa0876660:intron |
| ATCCTCATTACTCGGCATTT+TGG | 0.219811 | 6_1:+15007516 | Msa0876660:five_prime_UTR |
| CTGATACTTCCTGTTGTAAA+TGG | 0.239203 | 6_1:+15009039 | Msa0876660:CDS |
| GACAACTAAATGTGGATAAT+TGG | 0.245221 | 6_1:-15010429 | None:intergenic |
| CAGTGTTATCAATGTTTATA+AGG | 0.272486 | 6_1:+15010137 | Msa0876660:intron |
| CATTTAGTTGTCATGGGAAC+TGG | 0.293650 | 6_1:+15010440 | Msa0876660:CDS |
| AAGCAAAGGTTTACCATGTT+TGG | 0.294075 | 6_1:-15007559 | None:intergenic |
| CGAATTCTTCAAGTCCATTA+GGG | 0.318784 | 6_1:+15008507 | Msa0876660:CDS |
| GAATGGTGGGCTCAGCAATT+TGG | 0.323501 | 6_1:+15009404 | Msa0876660:CDS |
| ACGAATTCTTCAAGTCCATT+AGG | 0.326269 | 6_1:+15008506 | Msa0876660:CDS |
| GAGAACTACTGGCAAGGTTT+TGG | 0.326313 | 6_1:+15014459 | Msa0876660:three_prime_UTR |
| CTCCCTATACCTTAAGGATA+TGG | 0.326593 | 6_1:-15007357 | None:intergenic |
| CATTGTTATGTATCTTCATC+TGG | 0.334336 | 6_1:+15007289 | Msa0876660:five_prime_UTR |
| TTATGTATTGATTCTTAGAT+AGG | 0.338868 | 6_1:+15014515 | Msa0876660:three_prime_UTR |
| TAGCCATATCCTTAAGGTAT+AGG | 0.343351 | 6_1:+15007354 | Msa0876660:five_prime_UTR |
| ATGAGGATATATGAAATAAA+AGG | 0.360489 | 6_1:-15007501 | None:intergenic |
| TATCCGTTTGTTGTCCTTGT+CGG | 0.376290 | 6_1:+15010280 | Msa0876660:CDS |
| ATGGGAACTGGGCTTACTTT+CGG | 0.380940 | 6_1:+15010452 | Msa0876660:CDS |
| ACCCTACAAAACTAAGTTGA+TGG | 0.381419 | 6_1:-15007175 | None:intergenic |
| AGAGTCTTACCAGAAATAAA+AGG | 0.386724 | 6_1:-15009455 | None:intergenic |
| TCACTCATAAACACTTCATT+AGG | 0.402310 | 6_1:-15007145 | None:intergenic |
| TTGTGTTTGATGATAGCTTT+TGG | 0.409890 | 6_1:+15009846 | Msa0876660:CDS |
| CCAGATATACTCACCTCAAT+TGG | 0.413495 | 6_1:+15007971 | Msa0876660:intron |
| AAGGAAAATATTTATCTCAA+TGG | 0.414327 | 6_1:+15014614 | Msa0876660:three_prime_UTR |
| TGATCGAACAGCTCCCCTAA+TGG | 0.416067 | 6_1:-15008521 | None:intergenic |
| AATCTACCAAGATTTCATTT+CGG | 0.418458 | 6_1:+15014011 | Msa0876660:exon |
| CTACTATTGTCTGCATTGCT+TGG | 0.420160 | 6_1:+15007700 | Msa0876660:CDS |
| TGTGTGGAAGAAGTACTTTC+TGG | 0.423309 | 6_1:+15008776 | Msa0876660:CDS |
| AGCCATATCCTTAAGGTATA+GGG | 0.425534 | 6_1:+15007355 | Msa0876660:five_prime_UTR |
| CTTAAGGTATAGGGAGGGTT+TGG | 0.438961 | 6_1:+15007364 | Msa0876660:five_prime_UTR |
| AGCTTTAATGTGAATTGAAA+AGG | 0.442307 | 6_1:+15014595 | Msa0876660:three_prime_UTR |
| AAGGTTGTGAAGTCAAGAAA+TGG | 0.443013 | 6_1:+15010156 | Msa0876660:CDS |
| CAAACCCTCCCTATACCTTA+AGG | 0.451584 | 6_1:-15007363 | None:intergenic |
| GGCATACCGAAATGAAATCT+TGG | 0.455238 | 6_1:-15014017 | None:intergenic |
| CAAGGTTAGCCATATCCTTA+AGG | 0.458327 | 6_1:+15007348 | Msa0876660:five_prime_UTR |
| TTCTACAGGTGCTGAATGGT+GGG | 0.460804 | 6_1:+15009391 | Msa0876660:intron |
| TTTCTACAGGTGCTGAATGG+TGG | 0.462100 | 6_1:+15009390 | Msa0876660:intron |
| TAGACATTTGATGCTGTTGA+TGG | 0.466711 | 6_1:+15008467 | Msa0876660:intron |
| TTATCCACATTTAGTTGTCA+TGG | 0.467060 | 6_1:+15010433 | Msa0876660:CDS |
| TGTCCCATTGCAGGATAACT+AGG | 0.472790 | 6_1:+15013977 | Msa0876660:intron |
| TATTGATTCTTAGATAGGTT+AGG | 0.473920 | 6_1:+15014520 | Msa0876660:three_prime_UTR |
| TCCGTAGGTCCATTTACAAC+AGG | 0.488560 | 6_1:-15009048 | None:intergenic |
| TTGCAAGTCAAGAGAACTAC+TGG | 0.491956 | 6_1:+15014448 | Msa0876660:three_prime_UTR |
| TGTGCAAAATGAACCCATCT+TGG | 0.496233 | 6_1:-15008005 | None:intergenic |
| AACAGGAAGTATCAGTGTAT+TGG | 0.501512 | 6_1:-15009031 | None:intergenic |
| TTTGTTCCAGATAACTCTGA+TGG | 0.504877 | 6_1:+15007666 | Msa0876660:intron |
| TTAGGGGAGCTGTTCGATCA+TGG | 0.507201 | 6_1:+15008524 | Msa0876660:CDS |
| AGGTATAGGGAGGGTTTGGC+GGG | 0.508832 | 6_1:+15007368 | Msa0876660:five_prime_UTR |
| TATCCACATTTAGTTGTCAT+GGG | 0.514355 | 6_1:+15010434 | Msa0876660:CDS |
| ATTTAGTTGTCATGGGAACT+GGG | 0.520723 | 6_1:+15010441 | Msa0876660:CDS |
| GGTTGAGTTAGGTCCACATT+GGG | 0.523834 | 6_1:+15007112 | None:intergenic |
| GCTTACTTTCGGATATCTTG+TGG | 0.528578 | 6_1:+15010463 | Msa0876660:CDS |
| TCCTGTTGTAAATGGACCTA+CGG | 0.530088 | 6_1:+15009047 | Msa0876660:CDS |
| TGGACACAGCTCCTCCAAGA+TGG | 0.531879 | 6_1:+15007991 | Msa0876660:CDS |
| CACAATATAGCACTGTATGT+TGG | 0.535712 | 6_1:-15009828 | None:intergenic |
| CCTCCGACAAGGACAACAAA+CGG | 0.544347 | 6_1:-15010283 | None:intergenic |
| TTGTCGGAGGAGTGCTTATG+TGG | 0.545286 | 6_1:+15010296 | Msa0876660:CDS |
| CTAGTTTAAACGAGCACGCA+AGG | 0.549280 | 6_1:+15007330 | Msa0876660:five_prime_UTR |
| CCGTTTGTTGTCCTTGTCGG+AGG | 0.551272 | 6_1:+15010283 | Msa0876660:CDS |
| CACTTATGTGATGAACCAAA+AGG | 0.551574 | 6_1:+15010847 | Msa0876660:CDS |
| CTTGCATCAAGGCTAAATGA+TGG | 0.552012 | 6_1:+15013070 | Msa0876660:CDS |
| TTGCTAATGCACTTGCATCA+AGG | 0.554145 | 6_1:+15013059 | Msa0876660:CDS |
| AAGGTATAGGGAGGGTTTGG+CGG | 0.557159 | 6_1:+15007367 | Msa0876660:five_prime_UTR |
| GGGTTGAGTTAGGTCCACAT+TGG | 0.564231 | 6_1:+15007111 | None:intergenic |
| TTGTTCCAGATAACTCTGAT+GGG | 0.566961 | 6_1:+15007667 | Msa0876660:intron |
| GGACACAGCTCCTCCAAGAT+GGG | 0.571189 | 6_1:+15007992 | Msa0876660:CDS |
| TATCATGAATATATTCATAG+TGG | 0.572401 | 6_1:-15014573 | None:intergenic |
| TTTCATATATCCTCATTACT+CGG | 0.575130 | 6_1:+15007508 | Msa0876660:five_prime_UTR |
| GGAGGAGCTGTGTCCAATTG+AGG | 0.580594 | 6_1:-15007984 | None:intergenic |
| TTGCATCAAGGCTAAATGAT+GGG | 0.587433 | 6_1:+15013071 | Msa0876660:CDS |
| GCAAAATGAACCCATCTTGG+AGG | 0.587784 | 6_1:-15008002 | None:intergenic |
| AATTGTAGGATAATTAAACA+AGG | 0.588895 | 6_1:-15007438 | None:intergenic |
| AGCCAAAATGCCGAGTAATG+AGG | 0.593183 | 6_1:-15007518 | None:intergenic |
| AGACATTTGATGCTGTTGAT+GGG | 0.598242 | 6_1:+15008468 | Msa0876660:intron |
| GAAGAAGTACTTTCTGGTGG+TGG | 0.603104 | 6_1:+15008782 | Msa0876660:CDS |
| TGATGCAAGTGCATTAGCAA+TGG | 0.604002 | 6_1:-15013056 | None:intergenic |
| CATATCCTTAAGGTATAGGG+AGG | 0.610457 | 6_1:+15007358 | Msa0876660:five_prime_UTR |
| CTTACCATTGCTAACGCAAG+AGG | 0.617774 | 6_1:-15010186 | None:intergenic |
| CCATTGCAGGATAACTAGGA+AGG | 0.618990 | 6_1:+15013981 | Msa0876660:intron |
| TATGCCTCTTGCGTTAGCAA+TGG | 0.621209 | 6_1:+15010182 | Msa0876660:CDS |
| TGGCAAGTGGTAGATACATG+AGG | 0.625727 | 6_1:-15013036 | None:intergenic |
| ATTGTAGGATAATTAAACAA+GGG | 0.629038 | 6_1:-15007437 | None:intergenic |
| GTTGTAAATGGACCTACGGA+GGG | 0.637088 | 6_1:+15009051 | Msa0876660:CDS |
| GAATTCTTCAAGTCCATTAG+GGG | 0.640800 | 6_1:+15008508 | Msa0876660:CDS |
| GGCAAGTGGTAGATACATGA+GGG | 0.648543 | 6_1:-15013035 | None:intergenic |
| TTTGGGAGCACATCCATGTG+TGG | 0.648878 | 6_1:+15008760 | Msa0876660:CDS |
| ACATACTTGAGTGCGACGGT+TGG | 0.649437 | 6_1:-15009876 | None:intergenic |
| GTTCCCATGACAACTAAATG+TGG | 0.649879 | 6_1:-15010437 | None:intergenic |
| AGGTCTTATCTCACCCAATG+TGG | 0.650886 | 6_1:-15007125 | None:intergenic |
| ACATAAGCACTCCTCCGACA+AGG | 0.651566 | 6_1:-15010294 | None:intergenic |
| GAAAGTACTTCTTCCACACA+TGG | 0.654787 | 6_1:-15008773 | None:intergenic |
| AGTCAAGAGAACTACTGGCA+AGG | 0.657706 | 6_1:+15014453 | Msa0876660:three_prime_UTR |
| ATATCCTTAAGGTATAGGGA+GGG | 0.670837 | 6_1:+15007359 | Msa0876660:five_prime_UTR |
| AGTGCATTAGCAATGGCAAG+TGG | 0.672892 | 6_1:-15013049 | None:intergenic |
| TGTTGTAAATGGACCTACGG+AGG | 0.673487 | 6_1:+15009050 | Msa0876660:CDS |
| TAATTGGCTATGATGTCAGA+TGG | 0.673929 | 6_1:-15010413 | None:intergenic |
| TTATACATACTTGAGTGCGA+CGG | 0.679731 | 6_1:-15009880 | None:intergenic |
| ATTATCATAAGACCCTCCGT+AGG | 0.691029 | 6_1:-15009063 | None:intergenic |
| GTGGAAGAAGTACTTTCTGG+TGG | 0.727462 | 6_1:+15008779 | Msa0876660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAATAACTTATGTAAA+TGG | + | chr6_1:15009246-15009265 | Msa0876660:intron | 10.0% |
| !! | AATATTTCTTACAAAATAAA+TGG | - | chr6_1:15009628-15009647 | None:intergenic | 10.0% |
| !!! | TTGGAAATTTATTAATTTTA+GGG | + | chr6_1:15013424-15013443 | Msa0876660:intron | 10.0% |
| !! | AAATTAATCAGCAATATTAA+AGG | - | chr6_1:15007879-15007898 | None:intergenic | 15.0% |
| !! | AATATAGGAACTAAATAAAA+AGG | - | chr6_1:15008169-15008188 | None:intergenic | 15.0% |
| !!! | ATTTTTGTTAAAGATTCTTA+TGG | + | chr6_1:15008384-15008403 | Msa0876660:intron | 15.0% |
| !! | TAATAACAGAATGAAAAATA+CGG | - | chr6_1:15008563-15008582 | None:intergenic | 15.0% |
| !!! | CTTAACTTGAAAAATATTAT+TGG | + | chr6_1:15009722-15009741 | Msa0876660:intron | 15.0% |
| !! | CTTATATTCAAAATAAAACT+AGG | - | chr6_1:15010354-15010373 | None:intergenic | 15.0% |
| !!! | ATGCATTATTTTTTCATATT+TGG | + | chr6_1:15010937-15010956 | Msa0876660:intron | 15.0% |
| !! | TAGTCATATAATTTATAATG+AGG | - | chr6_1:15010969-15010988 | None:intergenic | 15.0% |
| !! | AATTATCATTCTAAGTAAAA+AGG | + | chr6_1:15011182-15011201 | Msa0876660:intron | 15.0% |
| !! | ATTATCATTCTAAGTAAAAA+GGG | + | chr6_1:15011183-15011202 | Msa0876660:intron | 15.0% |
| !! | ATATCTAACATAATATCTAA+TGG | + | chr6_1:15012287-15012306 | Msa0876660:intron | 15.0% |
| !!! | GAAATTGTTTGATATATTTT+TGG | + | chr6_1:15013153-15013172 | Msa0876660:intron | 15.0% |
| !!! | CTTGGAAATTTATTAATTTT+AGG | + | chr6_1:15013423-15013442 | Msa0876660:intron | 15.0% |
| !! | TTTAGAGAAAAAATTATGTT+TGG | - | chr6_1:15014217-15014236 | None:intergenic | 15.0% |
| !! | ATTGTAGGATAATTAAACAA+GGG | - | chr6_1:15007440-15007459 | None:intergenic | 20.0% |
| !! | AATTGTAGGATAATTAAACA+AGG | - | chr6_1:15007441-15007460 | None:intergenic | 20.0% |
| !! | ATGAGGATATATGAAATAAA+AGG | - | chr6_1:15007504-15007523 | None:intergenic | 20.0% |
| !! | GCAAAATAAAAATTAATGTG+AGG | - | chr6_1:15007803-15007822 | None:intergenic | 20.0% |
| !!! | ACAATGAAATCAGAAATTTT+TGG | + | chr6_1:15007833-15007852 | Msa0876660:intron | 20.0% |
| !!! | AATATTGCTGATTAATTTCA+TGG | + | chr6_1:15007881-15007900 | Msa0876660:intron | 20.0% |
| !!! | ATAAAGAAGTCTTTTGAAAT+TGG | + | chr6_1:15008141-15008160 | Msa0876660:intron | 20.0% |
| !! | CACGATATTTCTTTAAATAT+AGG | - | chr6_1:15008184-15008203 | None:intergenic | 20.0% |
| !!! | ATATTTTTGACTATATTGCA+GGG | + | chr6_1:15008622-15008641 | Msa0876660:intron | 20.0% |
| !!! | ATGACATTATTTTCTTTTGA+TGG | - | chr6_1:15008706-15008725 | None:intergenic | 20.0% |
| !! | TATCTGCATAAATATCTAAA+AGG | - | chr6_1:15009212-15009231 | None:intergenic | 20.0% |
| !!! | TGTTGTAATTATTTTTCTAC+AGG | + | chr6_1:15009377-15009396 | Msa0876660:intron | 20.0% |
| !! | CGAAATAAAGAATATAAAGA+CGG | - | chr6_1:15009481-15009500 | None:intergenic | 20.0% |
| !!! | CGTCTTTATATTCTTTATTT+CGG | + | chr6_1:15009479-15009498 | Msa0876660:intron | 20.0% |
| !!! | TGATTTTTGAATTTTCTTTC+TGG | + | chr6_1:15009793-15009812 | Msa0876660:intron | 20.0% |
| !! | ATGTCAACATTATTATCTAT+TGG | + | chr6_1:15010107-15010126 | Msa0876660:intron | 20.0% |
| !! | TTTGAATATAAGCTTATACT+TGG | + | chr6_1:15010362-15010381 | Msa0876660:intron | 20.0% |
| !!! | TTTGTTAATTGATTTAGAGA+TGG | - | chr6_1:15011313-15011332 | None:intergenic | 20.0% |
| !!! | TTTGTTAATTGATTTAGAGA+TGG | - | chr6_1:15011313-15011332 | None:intergenic | 20.0% |
| !! | AGTAAAAGATGAGATTAATA+AGG | + | chr6_1:15011437-15011456 | Msa0876660:intron | 20.0% |
| !!! | AATAAGGATTTAAACTTGTT+AGG | + | chr6_1:15011453-15011472 | Msa0876660:intron | 20.0% |
| !! | AACAAGAATAACAACAATAT+TGG | + | chr6_1:15011922-15011941 | Msa0876660:intron | 20.0% |
| !!! | TTTTGATCTAAGCTTATATA+TGG | - | chr6_1:15011966-15011985 | None:intergenic | 20.0% |
| !! | TAATATCAAAGAGAGAAATA+AGG | - | chr6_1:15012166-15012185 | None:intergenic | 20.0% |
| !! | GATAAGAATGCTAATTAAAA+AGG | + | chr6_1:15012344-15012363 | Msa0876660:intron | 20.0% |
| !!! | ATCATGAAAAAGTACTATTT+TGG | - | chr6_1:15012622-15012641 | None:intergenic | 20.0% |
| !!! | ATAGTACTTTTTCATGATTT+TGG | + | chr6_1:15012624-15012643 | Msa0876660:intron | 20.0% |
| !! | TAATATCACTTTAACGAATT+TGG | - | chr6_1:15012957-15012976 | None:intergenic | 20.0% |
| !! | GATAAAATAACATCAATCAA+AGG | - | chr6_1:15013125-15013144 | None:intergenic | 20.0% |
| !!! | ATCGATTATGTTTATTCTTT+TGG | + | chr6_1:15013328-15013347 | Msa0876660:intron | 20.0% |
| !!! | TTTTTGTTGAACTTTGTTTT+TGG | + | chr6_1:15013660-15013679 | Msa0876660:intron | 20.0% |
| !!! | TTATGTATTGATTCTTAGAT+AGG | + | chr6_1:15014515-15014534 | Msa0876660:three_prime_UTR | 20.0% |
| !! | TATCATGAATATATTCATAG+TGG | - | chr6_1:15014576-15014595 | None:intergenic | 20.0% |
| !! | AAGGAAAATATTTATCTCAA+TGG | + | chr6_1:15014614-15014633 | Msa0876660:three_prime_UTR | 20.0% |
| ! | TTTCATATATCCTCATTACT+CGG | + | chr6_1:15007508-15007527 | Msa0876660:five_prime_UTR | 25.0% |
| ! | CAGATGATACTACAAAATAA+AGG | - | chr6_1:15007585-15007604 | None:intergenic | 25.0% |
| !!! | TTATGGATTAGGATGATTAA+TGG | - | chr6_1:15007747-15007766 | None:intergenic | 25.0% |
| !! | CTATTATGTTTTCGACTTTA+TGG | - | chr6_1:15007764-15007783 | None:intergenic | 25.0% |
| ! | TAAAAATTAATGTGAGGAAC+AGG | - | chr6_1:15007797-15007816 | None:intergenic | 25.0% |
| ! | TTGGTTAAATTCTCATATTG+TGG | + | chr6_1:15008054-15008073 | Msa0876660:intron | 25.0% |
| ! | AGCATGAAATTTACCAAAAT+CGG | - | chr6_1:15008100-15008119 | None:intergenic | 25.0% |
| ! | CTAAAACACTTCCATAAATA+CGG | + | chr6_1:15008284-15008303 | Msa0876660:intron | 25.0% |
| ! | GATTCTTATGGTTTATCAAT+AGG | + | chr6_1:15008396-15008415 | Msa0876660:intron | 25.0% |
| !!! | GATATTTTTGACTATATTGC+AGG | + | chr6_1:15008621-15008640 | Msa0876660:intron | 25.0% |
| !! | ATATCTGCAGTTACATTTTA+TGG | + | chr6_1:15008808-15008827 | Msa0876660:CDS | 25.0% |
| ! | TCAAATACAATGCTATATAC+AGG | - | chr6_1:15008869-15008888 | None:intergenic | 25.0% |
| ! | CTACATCTATTCTAACAATT+CGG | + | chr6_1:15008913-15008932 | Msa0876660:intron | 25.0% |
| ! | ACAATAAAAACTCACAGAAA+GGG | - | chr6_1:15009126-15009145 | None:intergenic | 25.0% |
| ! | TACAATAAAAACTCACAGAA+AGG | - | chr6_1:15009127-15009146 | None:intergenic | 25.0% |
| !! | ATATTCTTTATTTCGGACAA+AGG | + | chr6_1:15009486-15009505 | Msa0876660:intron | 25.0% |
| !!! | ATTGTTTCAGGTTTAAAAGT+TGG | - | chr6_1:15009985-15010004 | None:intergenic | 25.0% |
| !! | AACCTGAAACAATTTCTTTT+AGG | + | chr6_1:15009992-15010011 | Msa0876660:intron | 25.0% |
| ! | AACCTAAAAGAAATTGTTTC+AGG | - | chr6_1:15009997-15010016 | None:intergenic | 25.0% |
| ! | TAAGTATACAGAAATTCACA+AGG | - | chr6_1:15010049-15010068 | None:intergenic | 25.0% |
| !! | AAGTTATTTGATGTTGATGA+AGG | + | chr6_1:15010075-15010094 | Msa0876660:intron | 25.0% |
| ! | CAGTGTTATCAATGTTTATA+AGG | + | chr6_1:15010137-15010156 | Msa0876660:intron | 25.0% |
| !!! | TGGTATTAAGCTGTTTTATT+TGG | + | chr6_1:15010890-15010909 | Msa0876660:intron | 25.0% |
| ! | CATAAATTCAACTCATGTAT+TGG | - | chr6_1:15011009-15011028 | None:intergenic | 25.0% |
| !! | TAGAATTCGTATTGATCATT+AGG | - | chr6_1:15011511-15011530 | None:intergenic | 25.0% |
| !! | AGAAATGATTGTGATAATGT+TGG | - | chr6_1:15011543-15011562 | None:intergenic | 25.0% |
| ! | TAGAACTAATGATATCACTT+TGG | - | chr6_1:15011582-15011601 | None:intergenic | 25.0% |
| !!! | AAGTGATATCATTAGTTCTA+AGG | + | chr6_1:15011582-15011601 | Msa0876660:intron | 25.0% |
| ! | GATTATCCAAGATTTAACAA+AGG | + | chr6_1:15011805-15011824 | Msa0876660:intron | 25.0% |
| ! | CTAGAATAACAATCTATCTT+AGG | - | chr6_1:15011846-15011865 | None:intergenic | 25.0% |
| ! | CAATTAGATTCAAGATGATT+TGG | - | chr6_1:15011891-15011910 | None:intergenic | 25.0% |
| ! | TTTCTCTCTTTGATATTACA+AGG | + | chr6_1:15012168-15012187 | Msa0876660:intron | 25.0% |
| ! | TTCTCTCTTTGATATTACAA+GGG | + | chr6_1:15012169-15012188 | Msa0876660:intron | 25.0% |
| ! | ATGATAAGTAAAGCGTAATA+AGG | + | chr6_1:15012695-15012714 | Msa0876660:intron | 25.0% |
| !!! | GATGTTATTTTATCTTCTCA+TGG | + | chr6_1:15013131-15013150 | Msa0876660:intron | 25.0% |
| !!! | TTGTTTGATATATTTTTGGC+AGG | + | chr6_1:15013157-15013176 | Msa0876660:intron | 25.0% |
| !!! | TGTTTGATATATTTTTGGCA+GGG | + | chr6_1:15013158-15013177 | Msa0876660:intron | 25.0% |
| ! | TGCAATATCAATGATTAAAC+CGG | - | chr6_1:15013244-15013263 | None:intergenic | 25.0% |
| !! | ATCGATGATTTTCAATTTCA+TGG | - | chr6_1:15013314-15013333 | None:intergenic | 25.0% |
| ! | CATACATTAGACACTAATTT+AGG | - | chr6_1:15013615-15013634 | None:intergenic | 25.0% |
| ! | CTAAATTAGTGTCTAATGTA+TGG | + | chr6_1:15013613-15013632 | Msa0876660:intron | 25.0% |
| !!! | AACTTTGTTTTTGGAAAAGT+TGG | + | chr6_1:15013669-15013688 | Msa0876660:intron | 25.0% |
| !!! | ACGTGTCAAAGATTTTTTTT+AGG | - | chr6_1:15013800-15013819 | None:intergenic | 25.0% |
| ! | GAGTATATATGTATTCATGT+CGG | + | chr6_1:15013881-15013900 | Msa0876660:intron | 25.0% |
| ! | AATCAAAAGACATTGTTCTT+AGG | - | chr6_1:15013941-15013960 | None:intergenic | 25.0% |
| ! | AATCTACCAAGATTTCATTT+CGG | + | chr6_1:15014011-15014030 | Msa0876660:exon | 25.0% |
| !!! | TACTTGTCTAAAATCACTTT+TGG | - | chr6_1:15014101-15014120 | None:intergenic | 25.0% |
| ! | ATGAATTCTAGCACAAAATT+AGG | + | chr6_1:15014174-15014193 | Msa0876660:intron | 25.0% |
| ! | AGAGAAAAAATTATGTTTGG+AGG | - | chr6_1:15014214-15014233 | None:intergenic | 25.0% |
| ! | AAAAGTGAATCAACAAAACA+TGG | - | chr6_1:15014413-15014432 | None:intergenic | 25.0% |
| !! | TCAATACTAATTTTGCTACA+AGG | + | chr6_1:15014482-15014501 | Msa0876660:three_prime_UTR | 25.0% |
| !!! | TATTGATTCTTAGATAGGTT+AGG | + | chr6_1:15014520-15014539 | Msa0876660:three_prime_UTR | 25.0% |
| !! | AGCTTTAATGTGAATTGAAA+AGG | + | chr6_1:15014595-15014614 | Msa0876660:three_prime_UTR | 25.0% |
| TCACTCATAAACACTTCATT+AGG | - | chr6_1:15007148-15007167 | None:intergenic | 30.0% | |
| !!! | ATCCATCAACTTAGTTTTGT+AGG | + | chr6_1:15007173-15007192 | Msa0876660:five_prime_UTR | 30.0% |
| !!! | TCCATCAACTTAGTTTTGTA+GGG | + | chr6_1:15007174-15007193 | Msa0876660:five_prime_UTR | 30.0% |
| CATTGTTATGTATCTTCATC+TGG | + | chr6_1:15007289-15007308 | Msa0876660:five_prime_UTR | 30.0% | |
| CTACAAAATAAAGGAAGCAA+AGG | - | chr6_1:15007576-15007595 | None:intergenic | 30.0% | |
| ACGATCATAAGCTATATCAT+TGG | + | chr6_1:15007622-15007641 | Msa0876660:intron | 30.0% | |
| ! | TGTTTTCGACTTTATGGATT+AGG | - | chr6_1:15007758-15007777 | None:intergenic | 30.0% |
| ! | AAGTTTTCGATACATGTTTG+TGG | + | chr6_1:15007926-15007945 | Msa0876660:intron | 30.0% |
| !!! | GCTACTTTTGTTTTTATACC+AGG | + | chr6_1:15008031-15008050 | Msa0876660:CDS | 30.0% |
| !!! | CTTTTGTTTTTATACCAGGT+TGG | + | chr6_1:15008035-15008054 | Msa0876660:intron | 30.0% |
| ATATGAGAATTTAACCAACC+TGG | - | chr6_1:15008052-15008071 | None:intergenic | 30.0% | |
| TCACTATCTAGAGATCATAT+TGG | + | chr6_1:15008230-15008249 | Msa0876660:intron | 30.0% | |
| AAAGCTTAACACCGTATTTA+TGG | - | chr6_1:15008298-15008317 | None:intergenic | 30.0% | |
| CTTGGCGAGAATAAAAAAAT+AGG | - | chr6_1:15008328-15008347 | None:intergenic | 30.0% | |
| !!! | CTATTTTTTTATTCTCGCCA+AGG | + | chr6_1:15008326-15008345 | Msa0876660:intron | 30.0% |
| !!! | GTATGTCTCTTTTAGCTTTT+TGG | + | chr6_1:15008666-15008685 | Msa0876660:intron | 30.0% |
| CGAATTGTTAGAATAGATGT+AGG | - | chr6_1:15008915-15008934 | None:intergenic | 30.0% | |
| TGTAAATGGTGAGATCTTAT+TGG | + | chr6_1:15009260-15009279 | Msa0876660:intron | 30.0% | |
| ACAACAATAACAATACGCAT+TGG | - | chr6_1:15009363-15009382 | None:intergenic | 30.0% | |
| !!! | AGTCTTTGCCTTTTTTGAAT+TGG | + | chr6_1:15009429-15009448 | Msa0876660:CDS | 30.0% |
| AAAGGCAACCAATTCAAAAA+AGG | - | chr6_1:15009440-15009459 | None:intergenic | 30.0% | |
| !! | AATTGGTTGCCTTTTATTTC+TGG | + | chr6_1:15009446-15009465 | Msa0876660:CDS | 30.0% |
| AGAGTCTTACCAGAAATAAA+AGG | - | chr6_1:15009458-15009477 | None:intergenic | 30.0% | |
| TGGACAAGCATAATTAATAC+TGG | - | chr6_1:15009661-15009680 | None:intergenic | 30.0% | |
| TTGTGTAAACCAGATCATAT+TGG | - | chr6_1:15009681-15009700 | None:intergenic | 30.0% | |
| !! | TTGTGTTTGATGATAGCTTT+TGG | + | chr6_1:15009846-15009865 | Msa0876660:CDS | 30.0% |
| AATACAGAAACTTTATGCCA+AGG | - | chr6_1:15009957-15009976 | None:intergenic | 30.0% | |
| TTATAGGAAAGAATTCCGAT+AGG | - | chr6_1:15010219-15010238 | None:intergenic | 30.0% | |
| CAACAAAGTAACCAGATTAT+AGG | - | chr6_1:15010235-15010254 | None:intergenic | 30.0% | |
| GACAACTAAATGTGGATAAT+TGG | - | chr6_1:15010432-15010451 | None:intergenic | 30.0% | |
| TTATCCACATTTAGTTGTCA+TGG | + | chr6_1:15010433-15010452 | Msa0876660:CDS | 30.0% | |
| TATCCACATTTAGTTGTCAT+GGG | + | chr6_1:15010434-15010453 | Msa0876660:CDS | 30.0% | |
| TACAAAACTCAACAGTTACA+CGG | - | chr6_1:15010510-15010529 | None:intergenic | 30.0% | |
| !! | AGTTTTGTAGATAGCTTCTA+GGG | + | chr6_1:15010521-15010540 | Msa0876660:intron | 30.0% |
| TAAAGCTGTTTATCCAAACA+AGG | - | chr6_1:15010563-15010582 | None:intergenic | 30.0% | |
| TCAGTAAAAGTCATACTGTA+AGG | - | chr6_1:15010790-15010809 | None:intergenic | 30.0% | |
| !! | ATTCCAGTTTTTAAGCCTTT+TGG | - | chr6_1:15010865-15010884 | None:intergenic | 30.0% |
| AGATGGTAAGTTATTACACT+TGG | - | chr6_1:15011296-15011315 | None:intergenic | 30.0% | |
| AGATGGTAAGTTATTACACT+TGG | - | chr6_1:15011296-15011315 | None:intergenic | 30.0% | |
| TTGCGATCGTTTAAATGATT+TGG | - | chr6_1:15011710-15011729 | None:intergenic | 30.0% | |
| AATCAAGAACTCAATGCTTT+CGG | - | chr6_1:15011779-15011798 | None:intergenic | 30.0% | |
| TTGACACCTTTGTTAAATCT+TGG | - | chr6_1:15011814-15011833 | None:intergenic | 30.0% | |
| CAAAAGATTACATGTTAGCA+AGG | + | chr6_1:15011981-15012000 | Msa0876660:intron | 30.0% | |
| GTAGCTAAATACTCTTTGTT+GGG | - | chr6_1:15012023-15012042 | None:intergenic | 30.0% | |
| TGTAGCTAAATACTCTTTGT+TGG | - | chr6_1:15012024-15012043 | None:intergenic | 30.0% | |
| TATTTAGCTACACATCATCA+TGG | + | chr6_1:15012032-15012051 | Msa0876660:intron | 30.0% | |
| TTGAGACATCACAAGTATAA+TGG | - | chr6_1:15012091-15012110 | None:intergenic | 30.0% | |
| ! | ATATAGAGTGAGAGTGATTT+TGG | - | chr6_1:15012136-15012155 | None:intergenic | 30.0% |
| CTTGCTTTGCAAGTTATTAA+AGG | - | chr6_1:15012747-15012766 | None:intergenic | 30.0% | |
| ! | ACTAGTCTCTCATTAACTAA+AGG | - | chr6_1:15013186-15013205 | None:intergenic | 30.0% |
| GGTTTAATCATTGATATTGC+AGG | + | chr6_1:15013243-15013262 | Msa0876660:intron | 30.0% | |
| TTTCAGTTTCAACGATTTCT+TGG | + | chr6_1:15013405-15013424 | Msa0876660:intron | 30.0% | |
| AAAAAATCTTTGACACGTCT+TGG | + | chr6_1:15013802-15013821 | Msa0876660:intron | 30.0% | |
| ATTAGATAAACTTGTGTGTG+AGG | - | chr6_1:15013833-15013852 | None:intergenic | 30.0% | |
| ! | TATGCCCTTTTCTAATTCAT+TGG | + | chr6_1:15014034-15014053 | Msa0876660:intron | 30.0% |
| TCGACCAATGAATTAGAAAA+GGG | - | chr6_1:15014041-15014060 | None:intergenic | 30.0% | |
| ! | ACCCTACAAAACTAAGTTGA+TGG | - | chr6_1:15007178-15007197 | None:intergenic | 35.0% |
| !!! | TAGTTTTGTAGGGTTGATTC+AGG | + | chr6_1:15007184-15007203 | Msa0876660:five_prime_UTR | 35.0% |
| TAGCCATATCCTTAAGGTAT+AGG | + | chr6_1:15007354-15007373 | Msa0876660:five_prime_UTR | 35.0% | |
| AGCCATATCCTTAAGGTATA+GGG | + | chr6_1:15007355-15007374 | Msa0876660:five_prime_UTR | 35.0% | |
| ATATCCTTAAGGTATAGGGA+GGG | + | chr6_1:15007359-15007378 | Msa0876660:five_prime_UTR | 35.0% | |
| ! | GATATTTTGCAGTCCAAACA+TGG | + | chr6_1:15007546-15007565 | Msa0876660:exon | 35.0% |
| AAGCAAAGGTTTACCATGTT+TGG | - | chr6_1:15007562-15007581 | None:intergenic | 35.0% | |
| TTTGTTCCAGATAACTCTGA+TGG | + | chr6_1:15007666-15007685 | Msa0876660:intron | 35.0% | |
| TTGTTCCAGATAACTCTGAT+GGG | + | chr6_1:15007667-15007686 | Msa0876660:intron | 35.0% | |
| TAAATCCCATCAGAGTTATC+TGG | - | chr6_1:15007675-15007694 | None:intergenic | 35.0% | |
| !! | TTAGGATGATTAATGGACTC+AGG | - | chr6_1:15007740-15007759 | None:intergenic | 35.0% |
| !! | AAAGTGTGTTTTTCAGTCCT+TGG | - | chr6_1:15008346-15008365 | None:intergenic | 35.0% |
| TAGACATTTGATGCTGTTGA+TGG | + | chr6_1:15008467-15008486 | Msa0876660:intron | 35.0% | |
| AGACATTTGATGCTGTTGAT+GGG | + | chr6_1:15008468-15008487 | Msa0876660:intron | 35.0% | |
| ACGAATTCTTCAAGTCCATT+AGG | + | chr6_1:15008506-15008525 | Msa0876660:CDS | 35.0% | |
| CGAATTCTTCAAGTCCATTA+GGG | + | chr6_1:15008507-15008526 | Msa0876660:CDS | 35.0% | |
| GAATTCTTCAAGTCCATTAG+GGG | + | chr6_1:15008508-15008527 | Msa0876660:CDS | 35.0% | |
| CAGAATGAAAAATACGGTGA+AGG | - | chr6_1:15008557-15008576 | None:intergenic | 35.0% | |
| !! | AGTTTGAAGCACTTGCTTTT+GGG | + | chr6_1:15008743-15008762 | Msa0876660:intron | 35.0% |
| CTATATACAGGACAAGAACA+TGG | - | chr6_1:15008857-15008876 | None:intergenic | 35.0% | |
| TTCTAACAATTCGGCATGAT+CGG | + | chr6_1:15008922-15008941 | Msa0876660:intron | 35.0% | |
| !! | AACAGGAAGTATCAGTGTAT+TGG | - | chr6_1:15009034-15009053 | None:intergenic | 35.0% |
| CTGATACTTCCTGTTGTAAA+TGG | + | chr6_1:15009039-15009058 | Msa0876660:CDS | 35.0% | |
| !! | GTTTAATTTGCATGCACTGA+TGG | - | chr6_1:15009312-15009331 | None:intergenic | 35.0% |
| !!! | ATTTTTCTACAGGTGCTGAA+TGG | + | chr6_1:15009387-15009406 | Msa0876660:intron | 35.0% |
| TATGCTTGTCCAATATGATC+TGG | + | chr6_1:15009669-15009688 | Msa0876660:intron | 35.0% | |
| AGCTCGACTATATCATTTGA+AGG | - | chr6_1:15009704-15009723 | None:intergenic | 35.0% | |
| CACAATATAGCACTGTATGT+TGG | - | chr6_1:15009831-15009850 | None:intergenic | 35.0% | |
| TTATACATACTTGAGTGCGA+CGG | - | chr6_1:15009883-15009902 | None:intergenic | 35.0% | |
| AAGGTTGTGAAGTCAAGAAA+TGG | + | chr6_1:15010156-15010175 | Msa0876660:CDS | 35.0% | |
| CGGAATTCTTTCCTATAATC+TGG | + | chr6_1:15010221-15010240 | Msa0876660:intron | 35.0% | |
| ! | TACTTGGATGATTTTGTTGC+AGG | + | chr6_1:15010378-15010397 | Msa0876660:intron | 35.0% |
| ! | ACTTGGATGATTTTGTTGCA+GGG | + | chr6_1:15010379-15010398 | Msa0876660:intron | 35.0% |
| TAATTGGCTATGATGTCAGA+TGG | - | chr6_1:15010416-15010435 | None:intergenic | 35.0% | |
| ATTTAGTTGTCATGGGAACT+GGG | + | chr6_1:15010441-15010460 | Msa0876660:CDS | 35.0% | |
| !! | GAGTTTTGTAGATAGCTTCT+AGG | + | chr6_1:15010520-15010539 | Msa0876660:intron | 35.0% |
| TCATAAACTATCACAGCCAA+TGG | + | chr6_1:15010694-15010713 | Msa0876660:intron | 35.0% | |
| ACAACTTATGACATGTCCAT+TGG | - | chr6_1:15010713-15010732 | None:intergenic | 35.0% | |
| CTGAGATGATTGTACACATA+AGG | - | chr6_1:15010766-15010785 | None:intergenic | 35.0% | |
| ! | TGATAGAAGCTCAATTTTGC+AGG | + | chr6_1:15010807-15010826 | Msa0876660:intron | 35.0% |
| ! | GATAGAAGCTCAATTTTGCA+GGG | + | chr6_1:15010808-15010827 | Msa0876660:intron | 35.0% |
| CACTTATGTGATGAACCAAA+AGG | + | chr6_1:15010847-15010866 | Msa0876660:CDS | 35.0% | |
| GAACCAAAAGGCTTAAAAAC+TGG | + | chr6_1:15010859-15010878 | Msa0876660:CDS | 35.0% | |
| CTTAAAAACTGGAATGTGCA+TGG | + | chr6_1:15010870-15010889 | Msa0876660:CDS | 35.0% | |
| ! | AGTAAAAAGGGTGCAAAGTT+TGG | + | chr6_1:15011195-15011214 | Msa0876660:intron | 35.0% |
| AGATAGAGTAATTCCACTTG+AGG | + | chr6_1:15011257-15011276 | Msa0876660:intron | 35.0% | |
| AGATAGAGTAATTCCACTTG+AGG | + | chr6_1:15011257-15011276 | Msa0876660:intron | 35.0% | |
| GTCACTAACGTTTACAAGAT+AGG | - | chr6_1:15011688-15011707 | None:intergenic | 35.0% | |
| TACTTGTGATGTCTCAACAA+AGG | + | chr6_1:15012094-15012113 | Msa0876660:intron | 35.0% | |
| ATTACTCTATCCATTTGTGC+AGG | - | chr6_1:15012677-15012696 | None:intergenic | 35.0% | |
| ! | GGCATTTAACGCTTATTTCT+CGG | + | chr6_1:15012716-15012735 | Msa0876660:intron | 35.0% |
| TTGCATCAAGGCTAAATGAT+GGG | + | chr6_1:15013071-15013090 | Msa0876660:CDS | 35.0% | |
| ! | AATGAGAGACTAGTTCTTCT+TGG | + | chr6_1:15013192-15013211 | Msa0876660:intron | 35.0% |
| GCATTTACAGGTACATATAC+CGG | + | chr6_1:15013222-15013241 | Msa0876660:intron | 35.0% | |
| TTTGCAGAAACAGAATCATC+AGG | - | chr6_1:15013500-15013519 | None:intergenic | 35.0% | |
| GTCTATGTTGTTCGCATTAT+AGG | + | chr6_1:15013914-15013933 | Msa0876660:intron | 35.0% | |
| CTCGACCAATGAATTAGAAA+AGG | - | chr6_1:15014042-15014061 | None:intergenic | 35.0% | |
| ! | CTTTTCTAATTCATTGGTCG+AGG | + | chr6_1:15014040-15014059 | Msa0876660:intron | 35.0% |
| !! | GAGGTTTTTCGACATTTTCT+TGG | + | chr6_1:15014059-15014078 | Msa0876660:intron | 35.0% |
| AATCAACAAAACATGGAGAG+AGG | - | chr6_1:15014406-15014425 | None:intergenic | 35.0% | |
| ! | CAAGGTTAGCCATATCCTTA+AGG | + | chr6_1:15007348-15007367 | Msa0876660:five_prime_UTR | 40.0% |
| CTCCCTATACCTTAAGGATA+TGG | - | chr6_1:15007360-15007379 | None:intergenic | 40.0% | |
| CATATCCTTAAGGTATAGGG+AGG | + | chr6_1:15007358-15007377 | Msa0876660:five_prime_UTR | 40.0% | |
| ! | ATCCTCATTACTCGGCATTT+TGG | + | chr6_1:15007516-15007535 | Msa0876660:five_prime_UTR | 40.0% |
| CTACTATTGTCTGCATTGCT+TGG | + | chr6_1:15007700-15007719 | Msa0876660:CDS | 40.0% | |
| CCAATTGAGGTGAGTATATC+TGG | - | chr6_1:15007974-15007993 | None:intergenic | 40.0% | |
| CCAGATATACTCACCTCAAT+TGG | + | chr6_1:15007971-15007990 | Msa0876660:intron | 40.0% | |
| TGTGCAAAATGAACCCATCT+TGG | - | chr6_1:15008008-15008027 | None:intergenic | 40.0% | |
| !! | AGATGGGTTCATTTTGCACA+CGG | + | chr6_1:15008008-15008027 | Msa0876660:CDS | 40.0% |
| !! | CTCTTGATGGTAACCGATTT+TGG | + | chr6_1:15008084-15008103 | Msa0876660:intron | 40.0% |
| GTGAGAGTCGCACAAAAAAA+AGG | - | chr6_1:15008214-15008233 | None:intergenic | 40.0% | |
| TTAGTGCACTCATCTTGACT+CGG | - | chr6_1:15008268-15008287 | None:intergenic | 40.0% | |
| !! | CAGTTTGAAGCACTTGCTTT+TGG | + | chr6_1:15008742-15008761 | Msa0876660:intron | 40.0% |
| !! | GAAAGTACTTCTTCCACACA+TGG | - | chr6_1:15008776-15008795 | None:intergenic | 40.0% |
| !! | TGTGTGGAAGAAGTACTTTC+TGG | + | chr6_1:15008776-15008795 | Msa0876660:CDS | 40.0% |
| ! | TTACATTTTATGGCGCAACG+TGG | + | chr6_1:15008818-15008837 | Msa0876660:CDS | 40.0% |
| ! | TACATTTTATGGCGCAACGT+GGG | + | chr6_1:15008819-15008838 | Msa0876660:CDS | 40.0% |
| TCCTGTTGTAAATGGACCTA+CGG | + | chr6_1:15009047-15009066 | Msa0876660:CDS | 40.0% | |
| ATTATCATAAGACCCTCCGT+AGG | - | chr6_1:15009066-15009085 | None:intergenic | 40.0% | |
| ATGGTAAGACCTTCTCCTAT+CGG | + | chr6_1:15010201-15010220 | Msa0876660:intron | 40.0% | |
| GAAAGAATTCCGATAGGAGA+AGG | - | chr6_1:15010213-15010232 | None:intergenic | 40.0% | |
| !! | TATCCGTTTGTTGTCCTTGT+CGG | + | chr6_1:15010280-15010299 | Msa0876660:CDS | 40.0% |
| GTTCCCATGACAACTAAATG+TGG | - | chr6_1:15010440-15010459 | None:intergenic | 40.0% | |
| CATTTAGTTGTCATGGGAAC+TGG | + | chr6_1:15010440-15010459 | Msa0876660:CDS | 40.0% | |
| GCTTACTTTCGGATATCTTG+TGG | + | chr6_1:15010463-15010482 | Msa0876660:CDS | 40.0% | |
| TGACTACACTACGATCACAT+AGG | + | chr6_1:15010983-15011002 | Msa0876660:intron | 40.0% | |
| AGTATTTGTATCGTCTCCAC+AGG | + | chr6_1:15011127-15011146 | Msa0876660:intron | 40.0% | |
| GTATTTGTATCGTCTCCACA+GGG | + | chr6_1:15011128-15011147 | Msa0876660:intron | 40.0% | |
| TTATGTGTGACGCTTGGTTA+AGG | - | chr6_1:15011488-15011507 | None:intergenic | 40.0% | |
| ATTAGGTTATGTGTGACGCT+TGG | - | chr6_1:15011494-15011513 | None:intergenic | 40.0% | |
| TGATATCACTTTGGACACGA+AGG | - | chr6_1:15011573-15011592 | None:intergenic | 40.0% | |
| TAAACGATCGCAAAGTCGAT+CGG | + | chr6_1:15011717-15011736 | Msa0876660:intron | 40.0% | |
| ATGCTTTCGGACATTTAGTC+AGG | - | chr6_1:15011766-15011785 | None:intergenic | 40.0% | |
| ATACTCTTTGTTGGGATGTG+AGG | - | chr6_1:15012015-15012034 | None:intergenic | 40.0% | |
| ! | CTTTTCAATCCATCCTTGCA+AGG | - | chr6_1:15012061-15012080 | None:intergenic | 40.0% |
| !! | CTTGCAAGGATGGATTGAAA+AGG | + | chr6_1:15012059-15012078 | Msa0876660:intron | 40.0% |
| !! | CAAGGATGGATTGAAAAGGA+AGG | + | chr6_1:15012063-15012082 | Msa0876660:intron | 40.0% |
| CGTTCATAACGTGTTCATGA+TGG | + | chr6_1:15012888-15012907 | Msa0876660:intron | 40.0% | |
| TGATGCAAGTGCATTAGCAA+TGG | - | chr6_1:15013059-15013078 | None:intergenic | 40.0% | |
| TTGCTAATGCACTTGCATCA+AGG | + | chr6_1:15013059-15013078 | Msa0876660:CDS | 40.0% | |
| CTTGCATCAAGGCTAAATGA+TGG | + | chr6_1:15013070-15013089 | Msa0876660:CDS | 40.0% | |
| CTTGGTTACTGTGCATTTAC+AGG | + | chr6_1:15013210-15013229 | Msa0876660:intron | 40.0% | |
| TCATGAAATTACGAATGCCC+TGG | + | chr6_1:15013559-15013578 | Msa0876660:intron | 40.0% | |
| CATGAAATTACGAATGCCCT+GGG | + | chr6_1:15013560-15013579 | Msa0876660:intron | 40.0% | |
| CCTGAAGCAATATATTCCCA+GGG | - | chr6_1:15013579-15013598 | None:intergenic | 40.0% | |
| ACCTGAAGCAATATATTCCC+AGG | - | chr6_1:15013580-15013599 | None:intergenic | 40.0% | |
| ! | TACAAGCATTGTACGAGTGT+CGG | - | chr6_1:15013745-15013764 | None:intergenic | 40.0% |
| TGCGAACAACATAGACGATA+CGG | - | chr6_1:15013910-15013929 | None:intergenic | 40.0% | |
| ! | CTTTTCTATTGTCCCATTGC+AGG | + | chr6_1:15013968-15013987 | Msa0876660:intron | 40.0% |
| CTTCCTAGTTATCCTGCAAT+GGG | - | chr6_1:15013983-15014002 | None:intergenic | 40.0% | |
| GGCATACCGAAATGAAATCT+TGG | - | chr6_1:15014020-15014039 | None:intergenic | 40.0% | |
| !! | GGATTGTGTGTTTGGTTCTA+CGG | - | chr6_1:15014379-15014398 | None:intergenic | 40.0% |
| !! | GAGGAAATGGATTGTGTGTT+TGG | - | chr6_1:15014387-15014406 | None:intergenic | 40.0% |
| CAAAACATGGAGAGAGGAAA+TGG | - | chr6_1:15014400-15014419 | None:intergenic | 40.0% | |
| TTGCAAGTCAAGAGAACTAC+TGG | + | chr6_1:15014448-15014467 | Msa0876660:three_prime_UTR | 40.0% | |
| ! | AGGTCTTATCTCACCCAATG+TGG | - | chr6_1:15007128-15007147 | None:intergenic | 45.0% |
| CTAGTTTAAACGAGCACGCA+AGG | + | chr6_1:15007330-15007349 | Msa0876660:five_prime_UTR | 45.0% | |
| CAAACCCTCCCTATACCTTA+AGG | - | chr6_1:15007366-15007385 | None:intergenic | 45.0% | |
| CTTAAGGTATAGGGAGGGTT+TGG | + | chr6_1:15007364-15007383 | Msa0876660:five_prime_UTR | 45.0% | |
| GTTTGGCGGGAATGAAAAAG+AGG | + | chr6_1:15007381-15007400 | Msa0876660:five_prime_UTR | 45.0% | |
| AGCCAAAATGCCGAGTAATG+AGG | - | chr6_1:15007521-15007540 | None:intergenic | 45.0% | |
| GCAAAATGAACCCATCTTGG+AGG | - | chr6_1:15008005-15008024 | None:intergenic | 45.0% | |
| !! | GATGGGTTCATTTTGCACAC+GGG | + | chr6_1:15008009-15008028 | Msa0876660:CDS | 45.0% |
| TTGTGGTACCAGTCTCTTGA+TGG | + | chr6_1:15008071-15008090 | Msa0876660:intron | 45.0% | |
| ATCGGTTACCATCAAGAGAC+TGG | - | chr6_1:15008082-15008101 | None:intergenic | 45.0% | |
| !! | GTGGAAGAAGTACTTTCTGG+TGG | + | chr6_1:15008779-15008798 | Msa0876660:CDS | 45.0% |
| !! | GAAGAAGTACTTTCTGGTGG+TGG | + | chr6_1:15008782-15008801 | Msa0876660:CDS | 45.0% |
| TCCGTAGGTCCATTTACAAC+AGG | - | chr6_1:15009051-15009070 | None:intergenic | 45.0% | |
| TGTTGTAAATGGACCTACGG+AGG | + | chr6_1:15009050-15009069 | Msa0876660:CDS | 45.0% | |
| GTTGTAAATGGACCTACGGA+GGG | + | chr6_1:15009051-15009070 | Msa0876660:CDS | 45.0% | |
| CAGCAGTGAAAAAGTGACAG+AGG | - | chr6_1:15009092-15009111 | None:intergenic | 45.0% | |
| !!! | CACTTTTTCACTGCTGTCGT+TGG | + | chr6_1:15009096-15009115 | Msa0876660:intron | 45.0% |
| !! | TTTCTACAGGTGCTGAATGG+TGG | + | chr6_1:15009390-15009409 | Msa0876660:intron | 45.0% |
| !! | TTCTACAGGTGCTGAATGGT+GGG | + | chr6_1:15009391-15009410 | Msa0876660:intron | 45.0% |
| CTTTATGCCAAGGACTAACG+CGG | - | chr6_1:15009947-15009966 | None:intergenic | 45.0% | |
| TATGCCTCTTGCGTTAGCAA+TGG | + | chr6_1:15010182-15010201 | Msa0876660:CDS | 45.0% | |
| CTTACCATTGCTAACGCAAG+AGG | - | chr6_1:15010189-15010208 | None:intergenic | 45.0% | |
| ATGGGAACTGGGCTTACTTT+CGG | + | chr6_1:15010452-15010471 | Msa0876660:CDS | 45.0% | |
| !! | GTAGATAGCTTCTAGGGTTG+AGG | + | chr6_1:15010527-15010546 | Msa0876660:intron | 45.0% |
| !! | ATAGCTTCTAGGGTTGAGGT+AGG | + | chr6_1:15010531-15010550 | Msa0876660:intron | 45.0% |
| ! | GAAGCTCAATTTTGCAGGGA+AGG | + | chr6_1:15010812-15010831 | Msa0876660:intron | 45.0% |
| ! | TAACAAAGCCTTTTCGCGCT+AGG | - | chr6_1:15011061-15011080 | None:intergenic | 45.0% |
| TTGATGTCTCTGACCTCAAG+TGG | - | chr6_1:15011273-15011292 | None:intergenic | 45.0% | |
| TTGATGTCTCTGACCTCAAG+TGG | - | chr6_1:15011273-15011292 | None:intergenic | 45.0% | |
| ACATTTAGTCAGGCTGGACA+CGG | - | chr6_1:15011756-15011775 | None:intergenic | 45.0% | |
| TTTCGGACATTTAGTCAGGC+TGG | - | chr6_1:15011762-15011781 | None:intergenic | 45.0% | |
| ATCATCATGGAAGCCTTGCA+AGG | + | chr6_1:15012045-15012064 | Msa0876660:intron | 45.0% | |
| CGCAAATTACGCTATTAGCG+TGG | + | chr6_1:15012393-15012412 | Msa0876660:intron | 45.0% | |
| ATTACGCTATTAGCGTGGCA+TGG | + | chr6_1:15012398-15012417 | Msa0876660:intron | 45.0% | |
| GTAACGTGGCACAATCTCAT+TGG | - | chr6_1:15012440-15012459 | None:intergenic | 45.0% | |
| ACTAGAGCAAAGACAGGCAA+GGG | - | chr6_1:15012463-15012482 | None:intergenic | 45.0% | |
| AACTAGAGCAAAGACAGGCA+AGG | - | chr6_1:15012464-15012483 | None:intergenic | 45.0% | |
| ! | CGCCAATAGCGTAGTTTTCT+GGG | + | chr6_1:15012485-15012504 | Msa0876660:intron | 45.0% |
| ! | GCCAATAGCGTAGTTTTCTG+GGG | + | chr6_1:15012486-15012505 | Msa0876660:intron | 45.0% |
| TCCCCAGAAAACTACGCTAT+TGG | - | chr6_1:15012490-15012509 | None:intergenic | 45.0% | |
| GGTCTTTGATCAGTGTCTTG+AGG | + | chr6_1:15012645-15012664 | Msa0876660:intron | 45.0% | |
| GAGGCTAATTCCTGCACAAA+TGG | + | chr6_1:15012664-15012683 | Msa0876660:intron | 45.0% | |
| GGCAAGTGGTAGATACATGA+GGG | - | chr6_1:15013038-15013057 | None:intergenic | 45.0% | |
| TGGCAAGTGGTAGATACATG+AGG | - | chr6_1:15013039-15013058 | None:intergenic | 45.0% | |
| AGTGCATTAGCAATGGCAAG+TGG | - | chr6_1:15013052-15013071 | None:intergenic | 45.0% | |
| CAGAAACAGAATCATCAGGC+AGG | - | chr6_1:15013496-15013515 | None:intergenic | 45.0% | |
| CCCTGGGAATATATTGCTTC+AGG | + | chr6_1:15013576-15013595 | Msa0876660:intron | 45.0% | |
| TGTCCCATTGCAGGATAACT+AGG | + | chr6_1:15013977-15013996 | Msa0876660:intron | 45.0% | |
| CCTTCCTAGTTATCCTGCAA+TGG | - | chr6_1:15013984-15014003 | None:intergenic | 45.0% | |
| CCATTGCAGGATAACTAGGA+AGG | + | chr6_1:15013981-15014000 | Msa0876660:intron | 45.0% | |
| AGTCAAGAGAACTACTGGCA+AGG | + | chr6_1:15014453-15014472 | Msa0876660:three_prime_UTR | 45.0% | |
| ! | GAGAACTACTGGCAAGGTTT+TGG | + | chr6_1:15014459-15014478 | Msa0876660:three_prime_UTR | 45.0% |
| !! | AATAAAAATAAAAAAATTGT+AGG | - | chr6_1:15007455-15007474 | None:intergenic | 5.0% |
| !! | TACAAAAAATAAAAATATTA+GGG | - | chr6_1:15009577-15009596 | None:intergenic | 5.0% |
| !! | ATACAAAAAATAAAAATATT+AGG | - | chr6_1:15009578-15009597 | None:intergenic | 5.0% |
| !!! | ATATTTTTATTTTTTGTATA+TGG | + | chr6_1:15009579-15009598 | Msa0876660:intron | 5.0% |
| AAGGTATAGGGAGGGTTTGG+CGG | + | chr6_1:15007367-15007386 | Msa0876660:five_prime_UTR | 50.0% | |
| TGATCGAACAGCTCCCCTAA+TGG | - | chr6_1:15008524-15008543 | None:intergenic | 50.0% | |
| TTAGGGGAGCTGTTCGATCA+TGG | + | chr6_1:15008524-15008543 | Msa0876660:CDS | 50.0% | |
| ! | TTTGGGAGCACATCCATGTG+TGG | + | chr6_1:15008760-15008779 | Msa0876660:CDS | 50.0% |
| !! | GAATGGTGGGCTCAGCAATT+TGG | + | chr6_1:15009404-15009423 | Msa0876660:CDS | 50.0% |
| ACATACTTGAGTGCGACGGT+TGG | - | chr6_1:15009879-15009898 | None:intergenic | 50.0% | |
| CCTCCGACAAGGACAACAAA+CGG | - | chr6_1:15010286-15010305 | None:intergenic | 50.0% | |
| ACATAAGCACTCCTCCGACA+AGG | - | chr6_1:15010297-15010316 | None:intergenic | 50.0% | |
| !! | TTGTCGGAGGAGTGCTTATG+TGG | + | chr6_1:15010296-15010315 | Msa0876660:CDS | 50.0% |
| ! | TCTAGGGTTGAGGTAGGCTT+AGG | + | chr6_1:15010537-15010556 | Msa0876660:intron | 50.0% |
| !! | AGGTAGGCTTAGGCCTTGTT+TGG | + | chr6_1:15010547-15010566 | Msa0876660:intron | 50.0% |
| GCTAGGTGGAGTCAGTTACA+TGG | - | chr6_1:15011044-15011063 | None:intergenic | 50.0% | |
| TGATGTCGCACTAATCCCTG+TGG | - | chr6_1:15011146-15011165 | None:intergenic | 50.0% | |
| ! | CAGGGATTAGTGCGACATCA+CGG | + | chr6_1:15011146-15011165 | Msa0876660:intron | 50.0% |
| TCATGGAAGCCTTGCAAGGA+TGG | + | chr6_1:15012049-15012068 | Msa0876660:intron | 50.0% | |
| ! | GGCATGGCGGTTTAAGTTTG+TGG | + | chr6_1:15012414-15012433 | Msa0876660:intron | 50.0% |
| CTAGAGCAAAGACAGGCAAG+GGG | - | chr6_1:15012462-15012481 | None:intergenic | 50.0% | |
| ! | GCGCCAATAGCGTAGTTTTC+TGG | + | chr6_1:15012484-15012503 | Msa0876660:intron | 50.0% |
| TTTGGCAGAAACTGTCCAGC+AGG | - | chr6_1:15012604-15012623 | None:intergenic | 50.0% | |
| CTTGTCCTAAGCTACGTGTC+CGG | + | chr6_1:15013698-15013717 | Msa0876660:intron | 50.0% | |
| AGGTATAGGGAGGGTTTGGC+GGG | + | chr6_1:15007368-15007387 | Msa0876660:five_prime_UTR | 55.0% | |
| GGAGGAGCTGTGTCCAATTG+AGG | - | chr6_1:15007987-15008006 | None:intergenic | 55.0% | |
| TGGACACAGCTCCTCCAAGA+TGG | + | chr6_1:15007991-15008010 | Msa0876660:CDS | 55.0% | |
| GGACACAGCTCCTCCAAGAT+GGG | + | chr6_1:15007992-15008011 | Msa0876660:CDS | 55.0% | |
| CACAGTACCGCGTTAGTCCT+TGG | + | chr6_1:15009937-15009956 | Msa0876660:intron | 55.0% | |
| !! | CCGTTTGTTGTCCTTGTCGG+AGG | + | chr6_1:15010283-15010302 | Msa0876660:CDS | 55.0% |
| TGACTCCACCTAGCGCGAAA+AGG | + | chr6_1:15011050-15011069 | Msa0876660:intron | 55.0% | |
| ! | CAAAGCCTTTTCGCGCTAGG+TGG | - | chr6_1:15011058-15011077 | None:intergenic | 55.0% |
| ACGCTATTAGCGTGGCATGG+CGG | + | chr6_1:15012401-15012420 | Msa0876660:intron | 55.0% | |
| AAGACAGGCAAGGGGTAACG+TGG | - | chr6_1:15012454-15012473 | None:intergenic | 55.0% | |
| GGCGCAACTAGAGCAAAGAC+AGG | - | chr6_1:15012469-15012488 | None:intergenic | 55.0% | |
| GCGAGCTCATTCACTCGCAA+TGG | - | chr6_1:15012563-15012582 | None:intergenic | 55.0% | |
| CAGGAAGCAGTAGCTCGCAA+TGG | - | chr6_1:15012585-15012604 | None:intergenic | 55.0% | |
| TCCTAAGCTACGTGTCCGGT+TGG | + | chr6_1:15013702-15013721 | Msa0876660:intron | 55.0% | |
| TCCGGTTGGCAAACATGCGT+CGG | + | chr6_1:15013716-15013735 | Msa0876660:intron | 55.0% | |
| ACCGACGCATGTTTGCCAAC+CGG | - | chr6_1:15013720-15013739 | None:intergenic | 55.0% | |
| TGCGAGCTACTGCTTCCTGC+TGG | + | chr6_1:15012586-15012605 | Msa0876660:intron | 60.0% | |
| GCCAACCGGACACGTAGCTT+AGG | - | chr6_1:15013706-15013725 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 15007124 | 15014654 | 15007124 | ID=Msa0876660;Name=Msa0876660 |
| chr6_1 | mRNA | 15007124 | 15014654 | 15007124 | ID=Msa0876660-mRNA-1;Parent=Msa0876660;Name=Msa0876660-mRNA-1;_AED=0.18;_eAED=0.18;_QI=441|0.86|0.93|1|0.73|0.81|16|229|284 |
| chr6_1 | exon | 15007124 | 15007567 | 15007124 | ID=Msa0876660-mRNA-1:exon:4288;Parent=Msa0876660-mRNA-1 |
| chr6_1 | exon | 15007676 | 15007726 | 15007676 | ID=Msa0876660-mRNA-1:exon:4289;Parent=Msa0876660-mRNA-1 |
| chr6_1 | exon | 15007975 | 15008052 | 15007975 | ID=Msa0876660-mRNA-1:exon:4290;Parent=Msa0876660-mRNA-1 |
| chr6_1 | exon | 15008470 | 15008545 | 15008470 | ID=Msa0876660-mRNA-1:exon:4291;Parent=Msa0876660-mRNA-1 |
| chr6_1 | exon | 15008643 | 15008665 | 15008643 | ID=Msa0876660-mRNA-1:exon:4292;Parent=Msa0876660-mRNA-1 |
| chr6_1 | exon | 15008745 | 15008845 | 15008745 | ID=Msa0876660-mRNA-1:exon:4293;Parent=Msa0876660-mRNA-1 |
| chr6_1 | exon | 15009023 | 15009072 | 15009023 | ID=Msa0876660-mRNA-1:exon:4294;Parent=Msa0876660-mRNA-1 |
| chr6_1 | exon | 15009399 | 15009467 | 15009399 | ID=Msa0876660-mRNA-1:exon:4295;Parent=Msa0876660-mRNA-1 |
| chr6_1 | exon | 15009823 | 15009892 | 15009823 | ID=Msa0876660-mRNA-1:exon:4296;Parent=Msa0876660-mRNA-1 |
| chr6_1 | exon | 15010140 | 15010203 | 15010140 | ID=Msa0876660-mRNA-1:exon:4297;Parent=Msa0876660-mRNA-1 |
| chr6_1 | exon | 15010277 | 15010317 | 15010277 | ID=Msa0876660-mRNA-1:exon:4298;Parent=Msa0876660-mRNA-1 |
| chr6_1 | exon | 15010400 | 15010484 | 15010400 | ID=Msa0876660-mRNA-1:exon:4299;Parent=Msa0876660-mRNA-1 |
| chr6_1 | exon | 15010829 | 15010891 | 15010829 | ID=Msa0876660-mRNA-1:exon:4300;Parent=Msa0876660-mRNA-1 |
| chr6_1 | exon | 15013034 | 15013092 | 15013034 | ID=Msa0876660-mRNA-1:exon:4301;Parent=Msa0876660-mRNA-1 |
| chr6_1 | exon | 15013990 | 15014032 | 15013990 | ID=Msa0876660-mRNA-1:exon:4302;Parent=Msa0876660-mRNA-1 |
| chr6_1 | exon | 15014447 | 15014654 | 15014447 | ID=Msa0876660-mRNA-1:exon:4303;Parent=Msa0876660-mRNA-1 |
| chr6_1 | five_prime_UTR | 15007124 | 15007564 | 15007124 | ID=Msa0876660-mRNA-1:five_prime_utr;Parent=Msa0876660-mRNA-1 |
| chr6_1 | CDS | 15007565 | 15007567 | 15007565 | ID=Msa0876660-mRNA-1:cds;Parent=Msa0876660-mRNA-1 |
| chr6_1 | CDS | 15007676 | 15007726 | 15007676 | ID=Msa0876660-mRNA-1:cds;Parent=Msa0876660-mRNA-1 |
| chr6_1 | CDS | 15007975 | 15008052 | 15007975 | ID=Msa0876660-mRNA-1:cds;Parent=Msa0876660-mRNA-1 |
| chr6_1 | CDS | 15008470 | 15008545 | 15008470 | ID=Msa0876660-mRNA-1:cds;Parent=Msa0876660-mRNA-1 |
| chr6_1 | CDS | 15008643 | 15008665 | 15008643 | ID=Msa0876660-mRNA-1:cds;Parent=Msa0876660-mRNA-1 |
| chr6_1 | CDS | 15008745 | 15008845 | 15008745 | ID=Msa0876660-mRNA-1:cds;Parent=Msa0876660-mRNA-1 |
| chr6_1 | CDS | 15009023 | 15009072 | 15009023 | ID=Msa0876660-mRNA-1:cds;Parent=Msa0876660-mRNA-1 |
| chr6_1 | CDS | 15009399 | 15009467 | 15009399 | ID=Msa0876660-mRNA-1:cds;Parent=Msa0876660-mRNA-1 |
| chr6_1 | CDS | 15009823 | 15009892 | 15009823 | ID=Msa0876660-mRNA-1:cds;Parent=Msa0876660-mRNA-1 |
| chr6_1 | CDS | 15010140 | 15010203 | 15010140 | ID=Msa0876660-mRNA-1:cds;Parent=Msa0876660-mRNA-1 |
| chr6_1 | CDS | 15010277 | 15010317 | 15010277 | ID=Msa0876660-mRNA-1:cds;Parent=Msa0876660-mRNA-1 |
| chr6_1 | CDS | 15010400 | 15010484 | 15010400 | ID=Msa0876660-mRNA-1:cds;Parent=Msa0876660-mRNA-1 |
| chr6_1 | CDS | 15010829 | 15010891 | 15010829 | ID=Msa0876660-mRNA-1:cds;Parent=Msa0876660-mRNA-1 |
| chr6_1 | CDS | 15013034 | 15013092 | 15013034 | ID=Msa0876660-mRNA-1:cds;Parent=Msa0876660-mRNA-1 |
| chr6_1 | CDS | 15013990 | 15014011 | 15013990 | ID=Msa0876660-mRNA-1:cds;Parent=Msa0876660-mRNA-1 |
| chr6_1 | three_prime_UTR | 15014012 | 15014032 | 15014012 | ID=Msa0876660-mRNA-1:three_prime_utr;Parent=Msa0876660-mRNA-1 |
| chr6_1 | three_prime_UTR | 15014447 | 15014654 | 15014447 | ID=Msa0876660-mRNA-1:three_prime_utr;Parent=Msa0876660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
