Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0606860 | XP_013457032.1 | 97.260 | 146 | 3 | 1 | 1 | 146 | 1 | 145 | 2.60e-97 | 287 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006070 | Msa0606860 | 0.820105 | 8.176461e-53 | -8.615850e-47 |
| Msa0011170 | Msa0606860 | 0.809091 | 2.245652e-50 | -8.615850e-47 |
| Msa0014710 | Msa0606860 | 0.809215 | 2.112694e-50 | -8.615850e-47 |
| Msa0017510 | Msa0606860 | 0.831659 | 1.472325e-55 | -8.615850e-47 |
| Msa0052640 | Msa0606860 | 0.803751 | 3.001957e-49 | -8.615850e-47 |
| Msa0052770 | Msa0606860 | 0.805307 | 1.421777e-49 | -8.615850e-47 |
| Msa0074700 | Msa0606860 | 0.806789 | 6.936452e-50 | -8.615850e-47 |
| Msa0081930 | Msa0606860 | 0.805400 | 1.359276e-49 | -8.615850e-47 |
| Msa0086650 | Msa0606860 | 0.809450 | 1.881172e-50 | -8.615850e-47 |
| Msa0606860 | Msa0610430 | 0.813276 | 2.778598e-51 | -8.615850e-47 |
| Msa0606860 | Msa0657970 | 0.816993 | 4.152769e-52 | -8.615850e-47 |
| Msa0606860 | Msa0663920 | 0.800743 | 1.248670e-48 | -8.615850e-47 |
| Msa0606860 | Msa0673460 | 0.813183 | 2.911475e-51 | -8.615850e-47 |
| Msa0606860 | Msa0692950 | 0.801001 | 1.106392e-48 | -8.615850e-47 |
| Msa0606860 | Msa0716840 | 0.804679 | 1.924091e-49 | -8.615850e-47 |
| Msa0606860 | Msa0743720 | 0.829362 | 5.372237e-55 | -8.615850e-47 |
| Msa0606860 | Msa0745790 | 0.807835 | 4.161945e-50 | -8.615850e-47 |
| Msa0606860 | Msa0824680 | 0.815315 | 9.847917e-52 | -8.615850e-47 |
| Msa0606860 | Msa0876660 | 0.802467 | 5.534626e-49 | -8.615850e-47 |
| Msa0606860 | Msa0880140 | 0.831587 | 1.534113e-55 | -8.615850e-47 |
| Msa0606860 | Msa0968680 | 0.803261 | 3.793218e-49 | -8.615850e-47 |
| Msa0606860 | Msa0979100 | 0.802252 | 6.126633e-49 | -8.615850e-47 |
| Msa0606860 | Msa0993290 | 0.800455 | 1.429899e-48 | -8.615850e-47 |
| Msa0606860 | Msa0993600 | 0.801535 | 8.600758e-49 | -8.615850e-47 |
| Msa0606860 | Msa0995270 | 0.804268 | 2.344131e-49 | -8.615850e-47 |
| Msa0606860 | Msa1014540 | 0.822623 | 2.145194e-53 | -8.615850e-47 |
| Msa0606860 | Msa1051200 | 0.808862 | 2.513603e-50 | -8.615850e-47 |
| Msa0606860 | Msa1082500 | 0.821603 | 3.698460e-53 | -8.615850e-47 |
| Msa0606860 | Msa1173140 | 0.808214 | 3.456473e-50 | -8.615850e-47 |
| Msa0606860 | Msa1174040 | 0.805826 | 1.106774e-49 | -8.615850e-47 |
| Msa0606860 | Msa1199220 | 0.816149 | 6.417820e-52 | -8.615850e-47 |
| Msa0606860 | Msa1205130 | 0.828034 | 1.124685e-54 | -8.615850e-47 |
| Msa0606860 | Msa1233890 | 0.821704 | 3.504828e-53 | -8.615850e-47 |
| Msa0606860 | Msa1251730 | 0.800489 | 1.407243e-48 | -8.615850e-47 |
| Msa0606860 | Msa1253020 | 0.811258 | 7.661176e-51 | -8.615850e-47 |
| Msa0606860 | Msa1271210 | 0.808628 | 2.820700e-50 | -8.615850e-47 |
| Msa0606860 | Msa1279210 | 0.816868 | 4.430248e-52 | -8.615850e-47 |
| Msa0606860 | Msa1283860 | 0.806556 | 7.768936e-50 | -8.615850e-47 |
| Msa0606860 | Msa1284680 | 0.804802 | 1.813325e-49 | -8.615850e-47 |
| Msa0606860 | Msa1293280 | 0.807077 | 6.028657e-50 | -8.615850e-47 |
| Msa0606860 | Msa1305340 | 0.805738 | 1.154545e-49 | -8.615850e-47 |
| Msa0606860 | Msa1348950 | 0.809698 | 1.664206e-50 | -8.615850e-47 |
| Msa0606860 | Msa1359040 | 0.805594 | 1.238100e-49 | -8.615850e-47 |
| Msa0606860 | Msa1386780 | 0.818815 | 1.609671e-52 | -8.615850e-47 |
| Msa0606860 | Msa1440910 | 0.801590 | 8.380172e-49 | -8.615850e-47 |
| Msa0606860 | Msa1452240 | 0.808068 | 3.712972e-50 | -8.615850e-47 |
| Msa0150820 | Msa0606860 | 0.803960 | 2.716964e-49 | -8.615850e-47 |
| Msa0157290 | Msa0606860 | 0.831016 | 2.119417e-55 | -8.615850e-47 |
| Msa0160550 | Msa0606860 | 0.805799 | 1.121399e-49 | -8.615850e-47 |
| Msa0165220 | Msa0606860 | 0.802436 | 5.614644e-49 | -8.615850e-47 |
| Msa0166870 | Msa0606860 | 0.801855 | 7.393597e-49 | -8.615850e-47 |
| Msa0222620 | Msa0606860 | 0.802922 | 4.458504e-49 | -8.615850e-47 |
| Msa0226890 | Msa0606860 | 0.808782 | 2.615575e-50 | -8.615850e-47 |
| Msa0379640 | Msa0606860 | 0.807772 | 4.293234e-50 | -8.615850e-47 |
| Msa0380740 | Msa0606860 | 0.804448 | 2.149986e-49 | -8.615850e-47 |
| Msa0407930 | Msa0606860 | 0.802422 | 5.651699e-49 | -8.615850e-47 |
| Msa0417270 | Msa0606860 | 0.801952 | 7.061842e-49 | -8.615850e-47 |
| Msa0442200 | Msa0606860 | 0.825995 | 3.458312e-54 | -8.615850e-47 |
| Msa0467060 | Msa0606860 | 0.810698 | 1.012887e-50 | -8.615850e-47 |
| Msa0288100 | Msa0606860 | 0.808609 | 2.848025e-50 | -8.615850e-47 |
| Msa0309770 | Msa0606860 | 0.819348 | 1.217399e-52 | -8.615850e-47 |
| Msa0336420 | Msa0606860 | 0.803692 | 3.087802e-49 | -8.615850e-47 |
| Msa0500360 | Msa0606860 | 0.801724 | 7.867312e-49 | -8.615850e-47 |
| Msa0517110 | Msa0606860 | 0.802685 | 4.988716e-49 | -8.615850e-47 |
| Msa0569500 | Msa0606860 | 0.810534 | 1.099098e-50 | -8.615850e-47 |
| Msa0597330 | Msa0606860 | 0.821347 | 4.236509e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0606860 | MtrunA17_Chr4g0047241 | 97.260 | 146 | 3 | 1 | 1 | 146 | 1 | 145 | 2.39e-101 | 287 |
| Msa0606860 | MtrunA17_Chr5g0421481 | 96.575 | 146 | 4 | 1 | 1 | 146 | 1 | 145 | 1.65e-100 | 285 |
| Msa0606860 | MtrunA17_Chr4g0037441 | 92.366 | 131 | 5 | 2 | 9 | 139 | 1 | 126 | 1.40e-81 | 236 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0606860 | AT4G04190.1 | 80.822 | 146 | 27 | 1 | 1 | 146 | 1 | 145 | 5.01e-85 | 247 |
| Msa0606860 | AT4G04190.3 | 76.087 | 92 | 22 | 0 | 55 | 146 | 4 | 95 | 5.34e-47 | 149 |
| Msa0606860 | AT4G04190.2 | 72.059 | 68 | 19 | 0 | 79 | 146 | 2 | 69 | 1.83e-28 | 101 |
Find 41 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCACATGAGAGGCTATTTC+TGG | 0.231154 | 4_2:+53517529 | None:intergenic |
| TCAAGATAGTGAATTCAAAT+TGG | 0.234330 | 4_2:-53516371 | Msa0606860:CDS |
| AAGTATGGAGGAAACTATTT+TGG | 0.266083 | 4_2:-53517596 | Msa0606860:CDS |
| GATTCTTGCTAGTGGAGTTC+AGG | 0.278444 | 4_2:-53515584 | Msa0606860:CDS |
| GCTATTTCTGGTGGTACTAT+TGG | 0.333564 | 4_2:+53517541 | None:intergenic |
| AGTTGACTCGCAGCCAAGTA+TGG | 0.341773 | 4_2:-53517611 | Msa0606860:CDS |
| CAAGATAGTGAATTCAAATT+GGG | 0.391075 | 4_2:-53516370 | Msa0606860:CDS |
| AGTGGAGTTCAGGGCATAGA+AGG | 0.397457 | 4_2:-53515574 | Msa0606860:CDS |
| TATGGATGATAAACATTACT+TGG | 0.412292 | 4_2:+53515510 | None:intergenic |
| AAAATAGTTTCCTCCATACT+TGG | 0.426189 | 4_2:+53517598 | None:intergenic |
| CTCTCCTTGGCTGCATCTAA+AGG | 0.430287 | 4_2:+53516337 | None:intergenic |
| TGAGGCAGAAGTTACATCAT+TGG | 0.440927 | 4_2:-53516302 | Msa0606860:CDS |
| ATAAACAATGTGCTGAAAGA+AGG | 0.441466 | 4_2:-53516651 | Msa0606860:CDS |
| ATAGCCTCTCATGTGCTTCA+AGG | 0.445252 | 4_2:-53517523 | Msa0606860:CDS |
| ATTCTTGCTAGTGGAGTTCA+GGG | 0.446759 | 4_2:-53515583 | Msa0606860:CDS |
| ATCTTTGTGATGGAATTCTC+AGG | 0.452486 | 4_2:-53517492 | Msa0606860:CDS |
| GGTTGGTGATGATCTAATGA+TGG | 0.465679 | 4_2:-53517575 | Msa0606860:CDS |
| CGCACAAGATGGAGCTTGCA+TGG | 0.489197 | 4_2:-53515547 | Msa0606860:CDS |
| AAATGCAGGATAGGGAGATA+AGG | 0.491034 | 4_2:-53516402 | Msa0606860:intron |
| GCAATCTCGTCTTGACAGAA+TGG | 0.493974 | 4_2:+53516679 | None:intergenic |
| AACATTACTTGGAATCAGTA+AGG | 0.517254 | 4_2:+53515521 | None:intergenic |
| TAAACAATGTGCTGAAAGAA+GGG | 0.524342 | 4_2:-53516650 | Msa0606860:intron |
| TCTGGTGGTACTATTGGTGA+TGG | 0.539852 | 4_2:+53517547 | None:intergenic |
| GGTGTTGTTGATCTTTGTGA+TGG | 0.547021 | 4_2:-53517502 | Msa0606860:CDS |
| TGCTAGAAAGCAACCATGGA+TGG | 0.547298 | 4_2:-53517708 | None:intergenic |
| AGGCGCTTGATTCTTGCTAG+TGG | 0.550829 | 4_2:-53515592 | Msa0606860:CDS |
| TAGAAGGTTTCCGCACAAGA+TGG | 0.557329 | 4_2:-53515558 | Msa0606860:CDS |
| AAGGAATGACATACCATCCA+TGG | 0.565066 | 4_2:+53517695 | None:intergenic |
| AAGCTGAGTAGACCTCTCCT+TGG | 0.576407 | 4_2:+53516324 | None:intergenic |
| GTTGGTGATGATCTAATGAT+GGG | 0.590636 | 4_2:-53517574 | Msa0606860:CDS |
| CTTTAGATGCAGCCAAGGAG+AGG | 0.605785 | 4_2:-53516336 | Msa0606860:CDS |
| GGAGAGGTCTACTCAGCTTG+AGG | 0.616954 | 4_2:-53516320 | Msa0606860:CDS |
| AATGCCTTTAGATGCAGCCA+AGG | 0.618951 | 4_2:-53516341 | Msa0606860:CDS |
| CATGCAAGCTCCATCTTGTG+CGG | 0.626079 | 4_2:+53515548 | None:intergenic |
| GGTGGTACTATTGGTGATGG+AGG | 0.632079 | 4_2:+53517550 | None:intergenic |
| AACACCTTGAAGCACATGAG+AGG | 0.654068 | 4_2:+53517519 | None:intergenic |
| AGGATAGGGAGATAAGGAAG+CGG | 0.662134 | 4_2:-53516396 | Msa0606860:CDS |
| TGACTCGCAGCCAAGTATGG+AGG | 0.663369 | 4_2:-53517608 | Msa0606860:CDS |
| ACATGAGAGGCTATTTCTGG+TGG | 0.667115 | 4_2:+53517532 | None:intergenic |
| CAGAAGTTACATCATTGGAG+AGG | 0.672063 | 4_2:-53516297 | Msa0606860:intron |
| ATTACTTGGAATCAGTAAGG+CGG | 0.723469 | 4_2:+53515524 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTTATTTATATGTC+TGG | - | chr4_2:53515574-53515593 | Msa0606860:CDS | 10.0% |
| !!! | TTTTATTTATTTATATGTCT+GGG | - | chr4_2:53515575-53515594 | Msa0606860:CDS | 10.0% |
| !!! | TTTATATACATATTTTTGTT+TGG | + | chr4_2:53515854-53515873 | None:intergenic | 10.0% |
| !!! | ATTTTATTTATTTATATGTC+TGG | - | chr4_2:53515574-53515593 | Msa0606860:CDS | 10.0% |
| !!! | TTTTATTTATTTATATGTCT+GGG | - | chr4_2:53515575-53515594 | Msa0606860:CDS | 10.0% |
| !!! | TTTATATACATATTTTTGTT+TGG | + | chr4_2:53515854-53515873 | None:intergenic | 10.0% |
| !! | TAAATACGAGTATAATTTAT+TGG | - | chr4_2:53516330-53516349 | Msa0606860:CDS | 15.0% |
| !! | AAATACGAGTATAATTTATT+GGG | - | chr4_2:53516331-53516350 | Msa0606860:CDS | 15.0% |
| !!! | TTTTAATATCCATTTTCAAA+TGG | + | chr4_2:53517226-53517245 | None:intergenic | 15.0% |
| !! | ATATTAAAAACACTATCAAA+GGG | - | chr4_2:53517237-53517256 | Msa0606860:intron | 15.0% |
| !!! | TTCTATTTATTTCTATCTAA+TGG | + | chr4_2:53517448-53517467 | None:intergenic | 15.0% |
| !! | AAAATTTATATCACATAATC+TGG | - | chr4_2:53517576-53517595 | Msa0606860:CDS | 15.0% |
| !! | TAAATACGAGTATAATTTAT+TGG | - | chr4_2:53516330-53516349 | Msa0606860:CDS | 15.0% |
| !! | AAATACGAGTATAATTTATT+GGG | - | chr4_2:53516331-53516350 | Msa0606860:CDS | 15.0% |
| !!! | TTTTAATATCCATTTTCAAA+TGG | + | chr4_2:53517226-53517245 | None:intergenic | 15.0% |
| !! | ATATTAAAAACACTATCAAA+GGG | - | chr4_2:53517237-53517256 | Msa0606860:intron | 15.0% |
| !!! | TTCTATTTATTTCTATCTAA+TGG | + | chr4_2:53517448-53517467 | None:intergenic | 15.0% |
| !! | AAAATTTATATCACATAATC+TGG | - | chr4_2:53517576-53517595 | Msa0606860:CDS | 15.0% |
| !! | TAACATTTCCATTAGAAATT+TGG | - | chr4_2:53515897-53515916 | Msa0606860:intron | 20.0% |
| !! | AACATTTCCATTAGAAATTT+GGG | - | chr4_2:53515898-53515917 | Msa0606860:intron | 20.0% |
| !!! | ATGTTGAAAGTGTTAATAAA+AGG | + | chr4_2:53516691-53516710 | None:intergenic | 20.0% |
| !! | AATGAAACAAAAGAAAATGA+TGG | + | chr4_2:53516780-53516799 | None:intergenic | 20.0% |
| !!! | TACTTTTGAAAAAAAAATGC+AGG | - | chr4_2:53516802-53516821 | Msa0606860:intron | 20.0% |
| !!! | ATTTTCAAATAATTGCTATG+TGG | - | chr4_2:53516945-53516964 | Msa0606860:intron | 20.0% |
| !! | GATATTAAAAACACTATCAA+AGG | - | chr4_2:53517236-53517255 | Msa0606860:intron | 20.0% |
| !! | ATAAATTTCATAATTGCACT+TGG | - | chr4_2:53517302-53517321 | Msa0606860:intron | 20.0% |
| !! | AATTCAATATACAGAGATAT+GGG | - | chr4_2:53517398-53517417 | Msa0606860:intron | 20.0% |
| !!! | ATGTTGAAATTTTTGATATC+TGG | - | chr4_2:53517506-53517525 | Msa0606860:CDS | 20.0% |
| !!! | GGGTTTTATTTTGAAATTTT+CGG | - | chr4_2:53517538-53517557 | Msa0606860:CDS | 20.0% |
| !! | TAACATTTCCATTAGAAATT+TGG | - | chr4_2:53515897-53515916 | Msa0606860:intron | 20.0% |
| !! | AACATTTCCATTAGAAATTT+GGG | - | chr4_2:53515898-53515917 | Msa0606860:intron | 20.0% |
| !!! | ATGTTGAAAGTGTTAATAAA+AGG | + | chr4_2:53516691-53516710 | None:intergenic | 20.0% |
| !! | AATGAAACAAAAGAAAATGA+TGG | + | chr4_2:53516780-53516799 | None:intergenic | 20.0% |
| !!! | TACTTTTGAAAAAAAAATGC+AGG | - | chr4_2:53516802-53516821 | Msa0606860:intron | 20.0% |
| !!! | ATTTTCAAATAATTGCTATG+TGG | - | chr4_2:53516945-53516964 | Msa0606860:intron | 20.0% |
| !! | GATATTAAAAACACTATCAA+AGG | - | chr4_2:53517236-53517255 | Msa0606860:intron | 20.0% |
| !! | ATAAATTTCATAATTGCACT+TGG | - | chr4_2:53517302-53517321 | Msa0606860:intron | 20.0% |
| !! | AATTCAATATACAGAGATAT+GGG | - | chr4_2:53517398-53517417 | Msa0606860:intron | 20.0% |
| !!! | ATGTTGAAATTTTTGATATC+TGG | - | chr4_2:53517506-53517525 | Msa0606860:CDS | 20.0% |
| !!! | GGGTTTTATTTTGAAATTTT+CGG | - | chr4_2:53517538-53517557 | Msa0606860:CDS | 20.0% |
| ! | CTAACACAAAACAAAAATGA+AGG | + | chr4_2:53515545-53515564 | None:intergenic | 25.0% |
| !!! | CTTCATTTTTGTTTTGTGTT+AGG | - | chr4_2:53515543-53515562 | Msa0606860:CDS | 25.0% |
| !!! | TTTTGTTTTGTGTTAGGTTT+AGG | - | chr4_2:53515549-53515568 | Msa0606860:CDS | 25.0% |
| !!! | TTTGTTTTGTGTTAGGTTTA+GGG | - | chr4_2:53515550-53515569 | Msa0606860:CDS | 25.0% |
| ! | CAAAGAAGTAAAGAAAAAAG+GGG | + | chr4_2:53515780-53515799 | None:intergenic | 25.0% |
| ! | GCAAAGAAGTAAAGAAAAAA+GGG | + | chr4_2:53515781-53515800 | None:intergenic | 25.0% |
| ! | AGCAAAGAAGTAAAGAAAAA+AGG | + | chr4_2:53515782-53515801 | None:intergenic | 25.0% |
| ! | AGACTTTGTAATTAAAGAGA+CGG | - | chr4_2:53515818-53515837 | Msa0606860:intron | 25.0% |
| !! | GGATATCCTTTGTTTAAAAA+AGG | - | chr4_2:53515973-53515992 | Msa0606860:intron | 25.0% |
| ! | CTTGATAAGAGTTTATAAAG+AGG | - | chr4_2:53516212-53516231 | Msa0606860:intron | 25.0% |
| !! | ATTTTGTATGATTGAAGAAG+TGG | - | chr4_2:53516304-53516323 | Msa0606860:CDS | 25.0% |
| ! | AACTTCTAACATTTATCAGT+GGG | + | chr4_2:53516399-53516418 | None:intergenic | 25.0% |
| !! | AAGCTTCATTCATATCTTTT+AGG | - | chr4_2:53516494-53516513 | Msa0606860:intron | 25.0% |
| !! | TTACCGTAATATTTGAGATA+GGG | - | chr4_2:53516721-53516740 | Msa0606860:intron | 25.0% |
| ! | TTGAAAAAAAAATGCAGGAT+AGG | - | chr4_2:53516807-53516826 | Msa0606860:intron | 25.0% |
| ! | TGAAAAAAAAATGCAGGATA+GGG | - | chr4_2:53516808-53516827 | Msa0606860:intron | 25.0% |
| ! | TCAAGATAGTGAATTCAAAT+TGG | - | chr4_2:53516847-53516866 | Msa0606860:intron | 25.0% |
| ! | CAAGATAGTGAATTCAAATT+GGG | - | chr4_2:53516848-53516867 | Msa0606860:intron | 25.0% |
| ! | GACACGTTCAATTATAATAT+TGG | + | chr4_2:53517180-53517199 | None:intergenic | 25.0% |
| !! | TAATATCCATTTTCAAATGG+TGG | + | chr4_2:53517223-53517242 | None:intergenic | 25.0% |
| ! | CAATTCAATATACAGAGATA+TGG | - | chr4_2:53517397-53517416 | Msa0606860:intron | 25.0% |
| ! | TTTGATATCTGGTTATCATA+AGG | - | chr4_2:53517517-53517536 | Msa0606860:CDS | 25.0% |
| ! | TTGATATCTGGTTATCATAA+GGG | - | chr4_2:53517518-53517537 | Msa0606860:CDS | 25.0% |
| !!! | ATTTTGAAATTTTCGGTGTA+TGG | - | chr4_2:53517545-53517564 | Msa0606860:CDS | 25.0% |
| ! | ACTATTCATTTCAAATGTAC+AGG | - | chr4_2:53517606-53517625 | Msa0606860:CDS | 25.0% |
| ! | CTAACACAAAACAAAAATGA+AGG | + | chr4_2:53515545-53515564 | None:intergenic | 25.0% |
| !!! | CTTCATTTTTGTTTTGTGTT+AGG | - | chr4_2:53515543-53515562 | Msa0606860:CDS | 25.0% |
| !!! | TTTTGTTTTGTGTTAGGTTT+AGG | - | chr4_2:53515549-53515568 | Msa0606860:CDS | 25.0% |
| !!! | TTTGTTTTGTGTTAGGTTTA+GGG | - | chr4_2:53515550-53515569 | Msa0606860:CDS | 25.0% |
| ! | CAAAGAAGTAAAGAAAAAAG+GGG | + | chr4_2:53515780-53515799 | None:intergenic | 25.0% |
| ! | GCAAAGAAGTAAAGAAAAAA+GGG | + | chr4_2:53515781-53515800 | None:intergenic | 25.0% |
| ! | AGCAAAGAAGTAAAGAAAAA+AGG | + | chr4_2:53515782-53515801 | None:intergenic | 25.0% |
| ! | AGACTTTGTAATTAAAGAGA+CGG | - | chr4_2:53515818-53515837 | Msa0606860:intron | 25.0% |
| !! | GGATATCCTTTGTTTAAAAA+AGG | - | chr4_2:53515973-53515992 | Msa0606860:intron | 25.0% |
| ! | CTTGATAAGAGTTTATAAAG+AGG | - | chr4_2:53516212-53516231 | Msa0606860:intron | 25.0% |
| !! | ATTTTGTATGATTGAAGAAG+TGG | - | chr4_2:53516304-53516323 | Msa0606860:CDS | 25.0% |
| ! | AACTTCTAACATTTATCAGT+GGG | + | chr4_2:53516399-53516418 | None:intergenic | 25.0% |
| !! | AAGCTTCATTCATATCTTTT+AGG | - | chr4_2:53516494-53516513 | Msa0606860:intron | 25.0% |
| !! | TTACCGTAATATTTGAGATA+GGG | - | chr4_2:53516721-53516740 | Msa0606860:intron | 25.0% |
| ! | TTGAAAAAAAAATGCAGGAT+AGG | - | chr4_2:53516807-53516826 | Msa0606860:intron | 25.0% |
| ! | TGAAAAAAAAATGCAGGATA+GGG | - | chr4_2:53516808-53516827 | Msa0606860:intron | 25.0% |
| ! | TCAAGATAGTGAATTCAAAT+TGG | - | chr4_2:53516847-53516866 | Msa0606860:intron | 25.0% |
| ! | CAAGATAGTGAATTCAAATT+GGG | - | chr4_2:53516848-53516867 | Msa0606860:intron | 25.0% |
| ! | GACACGTTCAATTATAATAT+TGG | + | chr4_2:53517180-53517199 | None:intergenic | 25.0% |
| !! | TAATATCCATTTTCAAATGG+TGG | + | chr4_2:53517223-53517242 | None:intergenic | 25.0% |
| ! | CAATTCAATATACAGAGATA+TGG | - | chr4_2:53517397-53517416 | Msa0606860:intron | 25.0% |
| ! | TTTGATATCTGGTTATCATA+AGG | - | chr4_2:53517517-53517536 | Msa0606860:CDS | 25.0% |
| ! | TTGATATCTGGTTATCATAA+GGG | - | chr4_2:53517518-53517537 | Msa0606860:CDS | 25.0% |
| !!! | ATTTTGAAATTTTCGGTGTA+TGG | - | chr4_2:53517545-53517564 | Msa0606860:CDS | 25.0% |
| ! | ACTATTCATTTCAAATGTAC+AGG | - | chr4_2:53517606-53517625 | Msa0606860:CDS | 25.0% |
| AAAATAGTTTCCTCCATACT+TGG | + | chr4_2:53515623-53515642 | None:intergenic | 30.0% | |
| ! | AAGTATGGAGGAAACTATTT+TGG | - | chr4_2:53515622-53515641 | Msa0606860:intron | 30.0% |
| GACTTTGTAATTAAAGAGAC+GGG | - | chr4_2:53515819-53515838 | Msa0606860:intron | 30.0% | |
| AGCAATACCCAAATTTCTAA+TGG | + | chr4_2:53515908-53515927 | None:intergenic | 30.0% | |
| GGATATCCTAACTAAACAAA+GGG | + | chr4_2:53515961-53515980 | None:intergenic | 30.0% | |
| AGGATATCCTAACTAAACAA+AGG | + | chr4_2:53515962-53515981 | None:intergenic | 30.0% | |
| !!! | GGCTTACCTTTTTTAAACAA+AGG | + | chr4_2:53515982-53516001 | None:intergenic | 30.0% |
| TGTTTAAAAAAGGTAAGCCT+AGG | - | chr4_2:53515983-53516002 | Msa0606860:intron | 30.0% | |
| GTTTAAAAAAGGTAAGCCTA+GGG | - | chr4_2:53515984-53516003 | Msa0606860:intron | 30.0% | |
| CTCTTGATTCTATCAATAAC+AGG | + | chr4_2:53516024-53516043 | None:intergenic | 30.0% | |
| GATAAGAGTTTATAAAGAGG+AGG | - | chr4_2:53516215-53516234 | Msa0606860:intron | 30.0% | |
| CAACTTCTAACATTTATCAG+TGG | + | chr4_2:53516400-53516419 | None:intergenic | 30.0% | |
| ATAAACAATGTGCTGAAAGA+AGG | - | chr4_2:53516567-53516586 | Msa0606860:intron | 30.0% | |
| TAAACAATGTGCTGAAAGAA+GGG | - | chr4_2:53516568-53516587 | Msa0606860:intron | 30.0% | |
| GAAGTAGTTAAAGAAAGAGA+GGG | + | chr4_2:53516655-53516674 | None:intergenic | 30.0% | |
| TGAAGTAGTTAAAGAAAGAG+AGG | + | chr4_2:53516656-53516675 | None:intergenic | 30.0% | |
| ! | CTTACCGTAATATTTGAGAT+AGG | - | chr4_2:53516720-53516739 | Msa0606860:intron | 30.0% |
| TGTCCCTATCTCAAATATTA+CGG | + | chr4_2:53516727-53516746 | None:intergenic | 30.0% | |
| TCAGGAAAAAATCATCTTCA+AGG | + | chr4_2:53517051-53517070 | None:intergenic | 30.0% | |
| !! | AGAAATTTCTTTGGAATCTC+AGG | + | chr4_2:53517069-53517088 | None:intergenic | 30.0% |
| CTGAACTACAGAAATTTCTT+TGG | + | chr4_2:53517078-53517097 | None:intergenic | 30.0% | |
| TCGAAATATTGAAGACCTTA+AGG | + | chr4_2:53517332-53517351 | None:intergenic | 30.0% | |
| AAAATAGTTTCCTCCATACT+TGG | + | chr4_2:53515623-53515642 | None:intergenic | 30.0% | |
| ! | AAGTATGGAGGAAACTATTT+TGG | - | chr4_2:53515622-53515641 | Msa0606860:intron | 30.0% |
| GACTTTGTAATTAAAGAGAC+GGG | - | chr4_2:53515819-53515838 | Msa0606860:intron | 30.0% | |
| AGCAATACCCAAATTTCTAA+TGG | + | chr4_2:53515908-53515927 | None:intergenic | 30.0% | |
| GGATATCCTAACTAAACAAA+GGG | + | chr4_2:53515961-53515980 | None:intergenic | 30.0% | |
| AGGATATCCTAACTAAACAA+AGG | + | chr4_2:53515962-53515981 | None:intergenic | 30.0% | |
| !!! | GGCTTACCTTTTTTAAACAA+AGG | + | chr4_2:53515982-53516001 | None:intergenic | 30.0% |
| TGTTTAAAAAAGGTAAGCCT+AGG | - | chr4_2:53515983-53516002 | Msa0606860:intron | 30.0% | |
| GTTTAAAAAAGGTAAGCCTA+GGG | - | chr4_2:53515984-53516003 | Msa0606860:intron | 30.0% | |
| CTCTTGATTCTATCAATAAC+AGG | + | chr4_2:53516024-53516043 | None:intergenic | 30.0% | |
| GATAAGAGTTTATAAAGAGG+AGG | - | chr4_2:53516215-53516234 | Msa0606860:intron | 30.0% | |
| CAACTTCTAACATTTATCAG+TGG | + | chr4_2:53516400-53516419 | None:intergenic | 30.0% | |
| ATAAACAATGTGCTGAAAGA+AGG | - | chr4_2:53516567-53516586 | Msa0606860:intron | 30.0% | |
| TAAACAATGTGCTGAAAGAA+GGG | - | chr4_2:53516568-53516587 | Msa0606860:intron | 30.0% | |
| GAAGTAGTTAAAGAAAGAGA+GGG | + | chr4_2:53516655-53516674 | None:intergenic | 30.0% | |
| TGAAGTAGTTAAAGAAAGAG+AGG | + | chr4_2:53516656-53516675 | None:intergenic | 30.0% | |
| ! | CTTACCGTAATATTTGAGAT+AGG | - | chr4_2:53516720-53516739 | Msa0606860:intron | 30.0% |
| TGTCCCTATCTCAAATATTA+CGG | + | chr4_2:53516727-53516746 | None:intergenic | 30.0% | |
| TCAGGAAAAAATCATCTTCA+AGG | + | chr4_2:53517051-53517070 | None:intergenic | 30.0% | |
| !! | AGAAATTTCTTTGGAATCTC+AGG | + | chr4_2:53517069-53517088 | None:intergenic | 30.0% |
| CTGAACTACAGAAATTTCTT+TGG | + | chr4_2:53517078-53517097 | None:intergenic | 30.0% | |
| TCGAAATATTGAAGACCTTA+AGG | + | chr4_2:53517332-53517351 | None:intergenic | 30.0% | |
| !!! | ATGGAGGAAACTATTTTGGT+TGG | - | chr4_2:53515626-53515645 | Msa0606860:intron | 35.0% |
| !! | GTTGGTGATGATCTAATGAT+GGG | - | chr4_2:53515644-53515663 | Msa0606860:intron | 35.0% |
| ! | ATCTTTGTGATGGAATTCTC+AGG | - | chr4_2:53515726-53515745 | Msa0606860:intron | 35.0% |
| ! | AGTCTTCCCTTTGTTTAGTT+AGG | - | chr4_2:53515952-53515971 | Msa0606860:intron | 35.0% |
| GCATGAACTGTTGAAATTTG+GGG | + | chr4_2:53516283-53516302 | None:intergenic | 35.0% | |
| CGCATGAACTGTTGAAATTT+GGG | + | chr4_2:53516284-53516303 | None:intergenic | 35.0% | |
| TCGCATGAACTGTTGAAATT+TGG | + | chr4_2:53516285-53516304 | None:intergenic | 35.0% | |
| ! | AGAGATTAAGGTATTAAGCC+AGG | - | chr4_2:53516368-53516387 | Msa0606860:CDS | 35.0% |
| TCTGGACAATTTAGCAAACA+CGG | + | chr4_2:53516972-53516991 | None:intergenic | 35.0% | |
| CTAAGCAAAGAAACATTCTC+TGG | + | chr4_2:53516990-53517009 | None:intergenic | 35.0% | |
| TTGGAAGAACAATATGCTGT+CGG | + | chr4_2:53517161-53517180 | None:intergenic | 35.0% | |
| ATAATGTGCTCAAGGAAGTA+AGG | + | chr4_2:53517263-53517282 | None:intergenic | 35.0% | |
| CAGAGAATATAATGTGCTCA+AGG | + | chr4_2:53517271-53517290 | None:intergenic | 35.0% | |
| ATTGCACTTGGATTTCCTTA+AGG | - | chr4_2:53517314-53517333 | Msa0606860:intron | 35.0% | |
| !!! | ATGGAGGAAACTATTTTGGT+TGG | - | chr4_2:53515626-53515645 | Msa0606860:intron | 35.0% |
| !! | GTTGGTGATGATCTAATGAT+GGG | - | chr4_2:53515644-53515663 | Msa0606860:intron | 35.0% |
| ! | ATCTTTGTGATGGAATTCTC+AGG | - | chr4_2:53515726-53515745 | Msa0606860:intron | 35.0% |
| ! | AGTCTTCCCTTTGTTTAGTT+AGG | - | chr4_2:53515952-53515971 | Msa0606860:intron | 35.0% |
| GCATGAACTGTTGAAATTTG+GGG | + | chr4_2:53516283-53516302 | None:intergenic | 35.0% | |
| CGCATGAACTGTTGAAATTT+GGG | + | chr4_2:53516284-53516303 | None:intergenic | 35.0% | |
| TCGCATGAACTGTTGAAATT+TGG | + | chr4_2:53516285-53516304 | None:intergenic | 35.0% | |
| ! | AGAGATTAAGGTATTAAGCC+AGG | - | chr4_2:53516368-53516387 | Msa0606860:CDS | 35.0% |
| TCTGGACAATTTAGCAAACA+CGG | + | chr4_2:53516972-53516991 | None:intergenic | 35.0% | |
| CTAAGCAAAGAAACATTCTC+TGG | + | chr4_2:53516990-53517009 | None:intergenic | 35.0% | |
| TTGGAAGAACAATATGCTGT+CGG | + | chr4_2:53517161-53517180 | None:intergenic | 35.0% | |
| ATAATGTGCTCAAGGAAGTA+AGG | + | chr4_2:53517263-53517282 | None:intergenic | 35.0% | |
| CAGAGAATATAATGTGCTCA+AGG | + | chr4_2:53517271-53517290 | None:intergenic | 35.0% | |
| ATTGCACTTGGATTTCCTTA+AGG | - | chr4_2:53517314-53517333 | Msa0606860:intron | 35.0% | |
| !! | GGTTGGTGATGATCTAATGA+TGG | - | chr4_2:53515643-53515662 | Msa0606860:intron | 40.0% |
| !! | GCTATTTCTGGTGGTACTAT+TGG | + | chr4_2:53515680-53515699 | None:intergenic | 40.0% |
| !! | GGTGTTGTTGATCTTTGTGA+TGG | - | chr4_2:53515716-53515735 | Msa0606860:intron | 40.0% |
| ATTAAAGAGACGGGAAAAGC+AGG | - | chr4_2:53515828-53515847 | Msa0606860:intron | 40.0% | |
| TCAAGAGTAAGCTCAGTTCA+TGG | - | chr4_2:53516037-53516056 | Msa0606860:intron | 40.0% | |
| CTAAGGGCAAATCGCAATTA+AGG | + | chr4_2:53516122-53516141 | None:intergenic | 40.0% | |
| TACCAACACAAGGCAACTAA+GGG | + | chr4_2:53516138-53516157 | None:intergenic | 40.0% | |
| TTACCAACACAAGGCAACTA+AGG | + | chr4_2:53516139-53516158 | None:intergenic | 40.0% | |
| !! | GTAAGTTGGCTTGTCTTTGA+GGG | - | chr4_2:53516155-53516174 | Msa0606860:intron | 40.0% |
| !! | TAAGTTGGCTTGTCTTTGAG+GGG | - | chr4_2:53516156-53516175 | Msa0606860:intron | 40.0% |
| CTAACTCGTCCTTACAAAAC+CGG | + | chr4_2:53516259-53516278 | None:intergenic | 40.0% | |
| TTTATTGGGTCTGACAAGAG+TGG | - | chr4_2:53516345-53516364 | Msa0606860:CDS | 40.0% | |
| TGACAAGAGTGGAGAGATTA+AGG | - | chr4_2:53516356-53516375 | Msa0606860:CDS | 40.0% | |
| !! | ATTTATCAGTGGGTTGAACC+TGG | + | chr4_2:53516389-53516408 | None:intergenic | 40.0% |
| GTAGTTAAAGAAAGAGAGGG+AGG | + | chr4_2:53516652-53516671 | None:intergenic | 40.0% | |
| AAATGCAGGATAGGGAGATA+AGG | - | chr4_2:53516816-53516835 | Msa0606860:intron | 40.0% | |
| TGAGGCAGAAGTTACATCAT+TGG | - | chr4_2:53516916-53516935 | Msa0606860:intron | 40.0% | |
| CAGAAGTTACATCATTGGAG+AGG | - | chr4_2:53516921-53516940 | Msa0606860:intron | 40.0% | |
| TCTTTGCTTAGCATAACCTG+AGG | - | chr4_2:53516999-53517018 | Msa0606860:intron | 40.0% | |
| CTTTGCTTAGCATAACCTGA+GGG | - | chr4_2:53517000-53517019 | Msa0606860:intron | 40.0% | |
| CGAATGCCACCATTTGAAAA+TGG | - | chr4_2:53517214-53517233 | Msa0606860:intron | 40.0% | |
| ! | ACATTATGTCTCTGCCACTT+TGG | - | chr4_2:53517359-53517378 | Msa0606860:intron | 40.0% |
| GAATAGTGTGAAAGCCAAAG+TGG | + | chr4_2:53517376-53517395 | None:intergenic | 40.0% | |
| ATTCTTGCTAGTGGAGTTCA+GGG | - | chr4_2:53517635-53517654 | Msa0606860:intron | 40.0% | |
| !! | GGTTGGTGATGATCTAATGA+TGG | - | chr4_2:53515643-53515662 | Msa0606860:intron | 40.0% |
| !! | GCTATTTCTGGTGGTACTAT+TGG | + | chr4_2:53515680-53515699 | None:intergenic | 40.0% |
| !! | GGTGTTGTTGATCTTTGTGA+TGG | - | chr4_2:53515716-53515735 | Msa0606860:intron | 40.0% |
| ATTAAAGAGACGGGAAAAGC+AGG | - | chr4_2:53515828-53515847 | Msa0606860:intron | 40.0% | |
| TCAAGAGTAAGCTCAGTTCA+TGG | - | chr4_2:53516037-53516056 | Msa0606860:intron | 40.0% | |
| CTAAGGGCAAATCGCAATTA+AGG | + | chr4_2:53516122-53516141 | None:intergenic | 40.0% | |
| TACCAACACAAGGCAACTAA+GGG | + | chr4_2:53516138-53516157 | None:intergenic | 40.0% | |
| TTACCAACACAAGGCAACTA+AGG | + | chr4_2:53516139-53516158 | None:intergenic | 40.0% | |
| !! | GTAAGTTGGCTTGTCTTTGA+GGG | - | chr4_2:53516155-53516174 | Msa0606860:intron | 40.0% |
| !! | TAAGTTGGCTTGTCTTTGAG+GGG | - | chr4_2:53516156-53516175 | Msa0606860:intron | 40.0% |
| CTAACTCGTCCTTACAAAAC+CGG | + | chr4_2:53516259-53516278 | None:intergenic | 40.0% | |
| TTTATTGGGTCTGACAAGAG+TGG | - | chr4_2:53516345-53516364 | Msa0606860:CDS | 40.0% | |
| TGACAAGAGTGGAGAGATTA+AGG | - | chr4_2:53516356-53516375 | Msa0606860:CDS | 40.0% | |
| !! | ATTTATCAGTGGGTTGAACC+TGG | + | chr4_2:53516389-53516408 | None:intergenic | 40.0% |
| GTAGTTAAAGAAAGAGAGGG+AGG | + | chr4_2:53516652-53516671 | None:intergenic | 40.0% | |
| AAATGCAGGATAGGGAGATA+AGG | - | chr4_2:53516816-53516835 | Msa0606860:intron | 40.0% | |
| TGAGGCAGAAGTTACATCAT+TGG | - | chr4_2:53516916-53516935 | Msa0606860:intron | 40.0% | |
| CAGAAGTTACATCATTGGAG+AGG | - | chr4_2:53516921-53516940 | Msa0606860:intron | 40.0% | |
| TCTTTGCTTAGCATAACCTG+AGG | - | chr4_2:53516999-53517018 | Msa0606860:intron | 40.0% | |
| CTTTGCTTAGCATAACCTGA+GGG | - | chr4_2:53517000-53517019 | Msa0606860:intron | 40.0% | |
| CGAATGCCACCATTTGAAAA+TGG | - | chr4_2:53517214-53517233 | Msa0606860:intron | 40.0% | |
| ! | ACATTATGTCTCTGCCACTT+TGG | - | chr4_2:53517359-53517378 | Msa0606860:intron | 40.0% |
| GAATAGTGTGAAAGCCAAAG+TGG | + | chr4_2:53517376-53517395 | None:intergenic | 40.0% | |
| ATTCTTGCTAGTGGAGTTCA+GGG | - | chr4_2:53517635-53517654 | Msa0606860:intron | 40.0% | |
| TCTGGTGGTACTATTGGTGA+TGG | + | chr4_2:53515674-53515693 | None:intergenic | 45.0% | |
| !! | ACATGAGAGGCTATTTCTGG+TGG | + | chr4_2:53515689-53515708 | None:intergenic | 45.0% |
| ! | AGCACATGAGAGGCTATTTC+TGG | + | chr4_2:53515692-53515711 | None:intergenic | 45.0% |
| ATAGCCTCTCATGTGCTTCA+AGG | - | chr4_2:53515695-53515714 | Msa0606860:intron | 45.0% | |
| AACACCTTGAAGCACATGAG+AGG | + | chr4_2:53515702-53515721 | None:intergenic | 45.0% | |
| AGGATTTCCAACAACCACAG+GGG | + | chr4_2:53516065-53516084 | None:intergenic | 45.0% | |
| CAGGATTTCCAACAACCACA+GGG | + | chr4_2:53516066-53516085 | None:intergenic | 45.0% | |
| GGGCAAATCGCAATTAAGGT+GGG | + | chr4_2:53516118-53516137 | None:intergenic | 45.0% | |
| AGGGCAAATCGCAATTAAGG+TGG | + | chr4_2:53516119-53516138 | None:intergenic | 45.0% | |
| ! | GTTGCCTTGTGTTGGTAAGT+TGG | - | chr4_2:53516141-53516160 | Msa0606860:intron | 45.0% |
| CAAGCCAACTTACCAACACA+AGG | + | chr4_2:53516148-53516167 | None:intergenic | 45.0% | |
| !! | GGTAAGTTGGCTTGTCTTTG+AGG | - | chr4_2:53516154-53516173 | Msa0606860:intron | 45.0% |
| !! | AAGTTGGCTTGTCTTTGAGG+GGG | - | chr4_2:53516157-53516176 | Msa0606860:intron | 45.0% |
| TAGTCCCACAACGGTTAGAT+AGG | - | chr4_2:53516186-53516205 | Msa0606860:intron | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr4_2:53516250-53516269 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr4_2:53516247-53516266 | Msa0606860:intron | 45.0% |
| !! | CGGTTTTGTAAGGACGAGTT+AGG | - | chr4_2:53516257-53516276 | Msa0606860:intron | 45.0% |
| GCAATCTCGTCTTGACAGAA+TGG | + | chr4_2:53516542-53516561 | None:intergenic | 45.0% | |
| GTTAAAGAAAGAGAGGGAGG+AGG | + | chr4_2:53516649-53516668 | None:intergenic | 45.0% | |
| AGGATAGGGAGATAAGGAAG+CGG | - | chr4_2:53516822-53516841 | Msa0606860:intron | 45.0% | |
| AATGCCTTTAGATGCAGCCA+AGG | - | chr4_2:53516877-53516896 | Msa0606860:intron | 45.0% | |
| ! | AGTTAGCTTCATGTTCCCTC+AGG | + | chr4_2:53517018-53517037 | None:intergenic | 45.0% |
| GATTCTTGCTAGTGGAGTTC+AGG | - | chr4_2:53517634-53517653 | Msa0606860:intron | 45.0% | |
| TAGAAGGTTTCCGCACAAGA+TGG | - | chr4_2:53517660-53517679 | Msa0606860:intron | 45.0% | |
| TCTGGTGGTACTATTGGTGA+TGG | + | chr4_2:53515674-53515693 | None:intergenic | 45.0% | |
| !! | ACATGAGAGGCTATTTCTGG+TGG | + | chr4_2:53515689-53515708 | None:intergenic | 45.0% |
| ! | AGCACATGAGAGGCTATTTC+TGG | + | chr4_2:53515692-53515711 | None:intergenic | 45.0% |
| ATAGCCTCTCATGTGCTTCA+AGG | - | chr4_2:53515695-53515714 | Msa0606860:intron | 45.0% | |
| AACACCTTGAAGCACATGAG+AGG | + | chr4_2:53515702-53515721 | None:intergenic | 45.0% | |
| AGGATTTCCAACAACCACAG+GGG | + | chr4_2:53516065-53516084 | None:intergenic | 45.0% | |
| CAGGATTTCCAACAACCACA+GGG | + | chr4_2:53516066-53516085 | None:intergenic | 45.0% | |
| GGGCAAATCGCAATTAAGGT+GGG | + | chr4_2:53516118-53516137 | None:intergenic | 45.0% | |
| AGGGCAAATCGCAATTAAGG+TGG | + | chr4_2:53516119-53516138 | None:intergenic | 45.0% | |
| ! | GTTGCCTTGTGTTGGTAAGT+TGG | - | chr4_2:53516141-53516160 | Msa0606860:intron | 45.0% |
| CAAGCCAACTTACCAACACA+AGG | + | chr4_2:53516148-53516167 | None:intergenic | 45.0% | |
| !! | GGTAAGTTGGCTTGTCTTTG+AGG | - | chr4_2:53516154-53516173 | Msa0606860:intron | 45.0% |
| !! | AAGTTGGCTTGTCTTTGAGG+GGG | - | chr4_2:53516157-53516176 | Msa0606860:intron | 45.0% |
| TAGTCCCACAACGGTTAGAT+AGG | - | chr4_2:53516186-53516205 | Msa0606860:intron | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr4_2:53516250-53516269 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr4_2:53516247-53516266 | Msa0606860:intron | 45.0% |
| !! | CGGTTTTGTAAGGACGAGTT+AGG | - | chr4_2:53516257-53516276 | Msa0606860:intron | 45.0% |
| GCAATCTCGTCTTGACAGAA+TGG | + | chr4_2:53516542-53516561 | None:intergenic | 45.0% | |
| GTTAAAGAAAGAGAGGGAGG+AGG | + | chr4_2:53516649-53516668 | None:intergenic | 45.0% | |
| AGGATAGGGAGATAAGGAAG+CGG | - | chr4_2:53516822-53516841 | Msa0606860:intron | 45.0% | |
| AATGCCTTTAGATGCAGCCA+AGG | - | chr4_2:53516877-53516896 | Msa0606860:intron | 45.0% | |
| ! | AGTTAGCTTCATGTTCCCTC+AGG | + | chr4_2:53517018-53517037 | None:intergenic | 45.0% |
| GATTCTTGCTAGTGGAGTTC+AGG | - | chr4_2:53517634-53517653 | Msa0606860:intron | 45.0% | |
| TAGAAGGTTTCCGCACAAGA+TGG | - | chr4_2:53517660-53517679 | Msa0606860:intron | 45.0% | |
| !! | AGTTGACTCGCAGCCAAGTA+TGG | - | chr4_2:53515607-53515626 | Msa0606860:intron | 50.0% |
| !! | GGTGGTACTATTGGTGATGG+AGG | + | chr4_2:53515671-53515690 | None:intergenic | 50.0% |
| GCAGGATTTCCAACAACCAC+AGG | + | chr4_2:53516067-53516086 | None:intergenic | 50.0% | |
| TGCCCTTAGTTGCCTTGTGT+TGG | - | chr4_2:53516133-53516152 | Msa0606860:intron | 50.0% | |
| ! | GGGTGGATTTAGTCCCACAA+CGG | - | chr4_2:53516177-53516196 | Msa0606860:intron | 50.0% |
| GCGTCCTATCTAACCGTTGT+GGG | + | chr4_2:53516193-53516212 | None:intergenic | 50.0% | |
| AGCGTCCTATCTAACCGTTG+TGG | + | chr4_2:53516194-53516213 | None:intergenic | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr4_2:53516245-53516264 | None:intergenic | 50.0% |
| AAAGAAAGAGAGGGAGGAGG+AGG | + | chr4_2:53516646-53516665 | None:intergenic | 50.0% | |
| CTCTCCTTGGCTGCATCTAA+AGG | + | chr4_2:53516884-53516903 | None:intergenic | 50.0% | |
| CTTTAGATGCAGCCAAGGAG+AGG | - | chr4_2:53516882-53516901 | Msa0606860:intron | 50.0% | |
| AAGCTGAGTAGACCTCTCCT+TGG | + | chr4_2:53516897-53516916 | None:intergenic | 50.0% | |
| AGGCGCTTGATTCTTGCTAG+TGG | - | chr4_2:53517626-53517645 | Msa0606860:intron | 50.0% | |
| AGTGGAGTTCAGGGCATAGA+AGG | - | chr4_2:53517644-53517663 | Msa0606860:intron | 50.0% | |
| CATGCAAGCTCCATCTTGTG+CGG | + | chr4_2:53517673-53517692 | None:intergenic | 50.0% | |
| !! | AGTTGACTCGCAGCCAAGTA+TGG | - | chr4_2:53515607-53515626 | Msa0606860:intron | 50.0% |
| !! | GGTGGTACTATTGGTGATGG+AGG | + | chr4_2:53515671-53515690 | None:intergenic | 50.0% |
| GCAGGATTTCCAACAACCAC+AGG | + | chr4_2:53516067-53516086 | None:intergenic | 50.0% | |
| TGCCCTTAGTTGCCTTGTGT+TGG | - | chr4_2:53516133-53516152 | Msa0606860:intron | 50.0% | |
| ! | GGGTGGATTTAGTCCCACAA+CGG | - | chr4_2:53516177-53516196 | Msa0606860:intron | 50.0% |
| GCGTCCTATCTAACCGTTGT+GGG | + | chr4_2:53516193-53516212 | None:intergenic | 50.0% | |
| AGCGTCCTATCTAACCGTTG+TGG | + | chr4_2:53516194-53516213 | None:intergenic | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr4_2:53516245-53516264 | None:intergenic | 50.0% |
| AAAGAAAGAGAGGGAGGAGG+AGG | + | chr4_2:53516646-53516665 | None:intergenic | 50.0% | |
| CTCTCCTTGGCTGCATCTAA+AGG | + | chr4_2:53516884-53516903 | None:intergenic | 50.0% | |
| CTTTAGATGCAGCCAAGGAG+AGG | - | chr4_2:53516882-53516901 | Msa0606860:intron | 50.0% | |
| AAGCTGAGTAGACCTCTCCT+TGG | + | chr4_2:53516897-53516916 | None:intergenic | 50.0% | |
| AGGCGCTTGATTCTTGCTAG+TGG | - | chr4_2:53517626-53517645 | Msa0606860:intron | 50.0% | |
| AGTGGAGTTCAGGGCATAGA+AGG | - | chr4_2:53517644-53517663 | Msa0606860:intron | 50.0% | |
| CATGCAAGCTCCATCTTGTG+CGG | + | chr4_2:53517673-53517692 | None:intergenic | 50.0% | |
| TGACTCGCAGCCAAGTATGG+AGG | - | chr4_2:53515610-53515629 | Msa0606860:intron | 55.0% | |
| !! | TTGGCTTGTCTTTGAGGGGG+TGG | - | chr4_2:53516160-53516179 | Msa0606860:intron | 55.0% |
| GCACTCCTCACCTTACAAGC+CGG | - | chr4_2:53516237-53516256 | Msa0606860:intron | 55.0% | |
| GGAGAGGTCTACTCAGCTTG+AGG | - | chr4_2:53516898-53516917 | Msa0606860:intron | 55.0% | |
| CGCACAAGATGGAGCTTGCA+TGG | - | chr4_2:53517671-53517690 | Msa0606860:intron | 55.0% | |
| TGACTCGCAGCCAAGTATGG+AGG | - | chr4_2:53515610-53515629 | Msa0606860:intron | 55.0% | |
| !! | TTGGCTTGTCTTTGAGGGGG+TGG | - | chr4_2:53516160-53516179 | Msa0606860:intron | 55.0% |
| GCACTCCTCACCTTACAAGC+CGG | - | chr4_2:53516237-53516256 | Msa0606860:intron | 55.0% | |
| GGAGAGGTCTACTCAGCTTG+AGG | - | chr4_2:53516898-53516917 | Msa0606860:intron | 55.0% | |
| CGCACAAGATGGAGCTTGCA+TGG | - | chr4_2:53517671-53517690 | Msa0606860:intron | 55.0% | |
| GGCAGAAGACACACTGCCCT+AGG | + | chr4_2:53516003-53516022 | None:intergenic | 60.0% | |
| CTCAGTTCATGGCACCCCTG+TGG | - | chr4_2:53516048-53516067 | Msa0606860:intron | 60.0% | |
| CATGGCACCCCTGTGGTTGT+TGG | - | chr4_2:53516055-53516074 | Msa0606860:intron | 60.0% | |
| AAATCCTGCCCCGAGCGTGA+GGG | - | chr4_2:53516078-53516097 | Msa0606860:intron | 60.0% | |
| AACACAACCCCTCACGCTCG+GGG | + | chr4_2:53516089-53516108 | None:intergenic | 60.0% | |
| CAACACAACCCCTCACGCTC+GGG | + | chr4_2:53516090-53516109 | None:intergenic | 60.0% | |
| CCAACACAACCCCTCACGCT+CGG | + | chr4_2:53516091-53516110 | None:intergenic | 60.0% | |
| GGCAGAAGACACACTGCCCT+AGG | + | chr4_2:53516003-53516022 | None:intergenic | 60.0% | |
| CTCAGTTCATGGCACCCCTG+TGG | - | chr4_2:53516048-53516067 | Msa0606860:intron | 60.0% | |
| CATGGCACCCCTGTGGTTGT+TGG | - | chr4_2:53516055-53516074 | Msa0606860:intron | 60.0% | |
| AAATCCTGCCCCGAGCGTGA+GGG | - | chr4_2:53516078-53516097 | Msa0606860:intron | 60.0% | |
| AACACAACCCCTCACGCTCG+GGG | + | chr4_2:53516089-53516108 | None:intergenic | 60.0% | |
| CAACACAACCCCTCACGCTC+GGG | + | chr4_2:53516090-53516109 | None:intergenic | 60.0% | |
| CCAACACAACCCCTCACGCT+CGG | + | chr4_2:53516091-53516110 | None:intergenic | 60.0% | |
| GAAATCCTGCCCCGAGCGTG+AGG | - | chr4_2:53516077-53516096 | Msa0606860:intron | 65.0% | |
| AATCCTGCCCCGAGCGTGAG+GGG | - | chr4_2:53516079-53516098 | Msa0606860:intron | 65.0% | |
| CCGAGCGTGAGGGGTTGTGT+TGG | - | chr4_2:53516088-53516107 | Msa0606860:intron | 65.0% | |
| GAAATCCTGCCCCGAGCGTG+AGG | - | chr4_2:53516077-53516096 | Msa0606860:intron | 65.0% | |
| AATCCTGCCCCGAGCGTGAG+GGG | - | chr4_2:53516079-53516098 | Msa0606860:intron | 65.0% | |
| CCGAGCGTGAGGGGTTGTGT+TGG | - | chr4_2:53516088-53516107 | Msa0606860:intron | 65.0% | |
| CAACCCCTCACGCTCGGGGC+AGG | + | chr4_2:53516085-53516104 | None:intergenic | 75.0% | |
| CAACCCCTCACGCTCGGGGC+AGG | + | chr4_2:53516085-53516104 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 53515525 | 53517715 | 53515525 | ID=Msa0606860;Name=Msa0606860 |
| chr4_2 | mRNA | 53515525 | 53517715 | 53515525 | ID=Msa0606860-mRNA-1;Parent=Msa0606860;Name=Msa0606860-mRNA-1;_AED=0.45;_eAED=0.45;_QI=0|0|0|0.8|1|1|5|0|146 |
| chr4_2 | exon | 53517709 | 53517715 | 53517709 | ID=Msa0606860-mRNA-1:exon:13244;Parent=Msa0606860-mRNA-1 |
| chr4_2 | exon | 53517479 | 53517631 | 53517479 | ID=Msa0606860-mRNA-1:exon:13243;Parent=Msa0606860-mRNA-1 |
| chr4_2 | exon | 53516651 | 53516724 | 53516651 | ID=Msa0606860-mRNA-1:exon:13242;Parent=Msa0606860-mRNA-1 |
| chr4_2 | exon | 53516298 | 53516416 | 53516298 | ID=Msa0606860-mRNA-1:exon:13241;Parent=Msa0606860-mRNA-1 |
| chr4_2 | exon | 53515525 | 53515612 | 53515525 | ID=Msa0606860-mRNA-1:exon:13240;Parent=Msa0606860-mRNA-1 |
| chr4_2 | CDS | 53517709 | 53517715 | 53517709 | ID=Msa0606860-mRNA-1:cds;Parent=Msa0606860-mRNA-1 |
| chr4_2 | CDS | 53517479 | 53517631 | 53517479 | ID=Msa0606860-mRNA-1:cds;Parent=Msa0606860-mRNA-1 |
| chr4_2 | CDS | 53516651 | 53516724 | 53516651 | ID=Msa0606860-mRNA-1:cds;Parent=Msa0606860-mRNA-1 |
| chr4_2 | CDS | 53516298 | 53516416 | 53516298 | ID=Msa0606860-mRNA-1:cds;Parent=Msa0606860-mRNA-1 |
| chr4_2 | CDS | 53515525 | 53515612 | 53515525 | ID=Msa0606860-mRNA-1:cds;Parent=Msa0606860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
