Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979010 | KEH25369.1 | 90.556 | 360 | 0 | 2 | 1 | 345 | 1 | 341 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979010 | sp|O82567|AAPT1_ARATH | 74.167 | 360 | 59 | 2 | 1 | 345 | 49 | 389 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979010 | A0A072U6L5 | 90.556 | 360 | 0 | 2 | 1 | 345 | 1 | 341 | 0.0 | 647 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015300 | Msa0979010 | 0.813787 | 2.144936e-51 | -8.615850e-47 |
| Msa0017510 | Msa0979010 | 0.833306 | 5.752159e-56 | -8.615850e-47 |
| Msa0034270 | Msa0979010 | 0.813531 | 2.441942e-51 | -8.615850e-47 |
| Msa0040450 | Msa0979010 | 0.819077 | 1.403550e-52 | -8.615850e-47 |
| Msa0044020 | Msa0979010 | 0.807711 | 4.424193e-50 | -8.615850e-47 |
| Msa0046100 | Msa0979010 | 0.837098 | 6.350661e-57 | -8.615850e-47 |
| Msa0047030 | Msa0979010 | 0.802306 | 5.973772e-49 | -8.615850e-47 |
| Msa0073530 | Msa0979010 | 0.801890 | 7.272504e-49 | -8.615850e-47 |
| Msa0076000 | Msa0979010 | 0.811616 | 6.403214e-51 | -8.615850e-47 |
| Msa0089380 | Msa0979010 | 0.802383 | 5.757298e-49 | -8.615850e-47 |
| Msa0089630 | Msa0979010 | 0.805992 | 1.021012e-49 | -8.615850e-47 |
| Msa0090590 | Msa0979010 | 0.807258 | 5.518828e-50 | -8.615850e-47 |
| Msa0094120 | Msa0979010 | 0.802145 | 6.447127e-49 | -8.615850e-47 |
| Msa0101700 | Msa0979010 | 0.813389 | 2.623926e-51 | -8.615850e-47 |
| Msa0110970 | Msa0979010 | 0.829320 | 5.500063e-55 | -8.615850e-47 |
| Msa0113970 | Msa0979010 | 0.803899 | 2.797344e-49 | -8.615850e-47 |
| Msa0607050 | Msa0979010 | 0.802293 | 6.008419e-49 | -8.615850e-47 |
| Msa0616020 | Msa0979010 | 0.813701 | 2.240287e-51 | -8.615850e-47 |
| Msa0623700 | Msa0979010 | 0.821488 | 3.930894e-53 | -8.615850e-47 |
| Msa0649490 | Msa0979010 | 0.803483 | 3.411644e-49 | -8.615850e-47 |
| Msa0650020 | Msa0979010 | 0.816283 | 5.989502e-52 | -8.615850e-47 |
| Msa0656530 | Msa0979010 | 0.807723 | 4.397715e-50 | -8.615850e-47 |
| Msa0657970 | Msa0979010 | 0.824929 | 6.183410e-54 | -8.615850e-47 |
| Msa0690150 | Msa0979010 | 0.809710 | 1.654398e-50 | -8.615850e-47 |
| Msa0698770 | Msa0979010 | 0.814096 | 1.833586e-51 | -8.615850e-47 |
| Msa0703230 | Msa0979010 | 0.822112 | 2.819718e-53 | -8.615850e-47 |
| Msa0704600 | Msa0979010 | 0.802699 | 4.957362e-49 | -8.615850e-47 |
| Msa0708520 | Msa0979010 | 0.850355 | 1.791103e-60 | -8.615850e-47 |
| Msa0724830 | Msa0979010 | 0.810124 | 1.347495e-50 | -8.615850e-47 |
| Msa0742380 | Msa0979010 | 0.827292 | 1.695801e-54 | -8.615850e-47 |
| Msa0749760 | Msa0979010 | 0.801486 | 8.803761e-49 | -8.615850e-47 |
| Msa0750350 | Msa0979010 | 0.806928 | 6.483186e-50 | -8.615850e-47 |
| Msa0801760 | Msa0979010 | 0.809113 | 2.221744e-50 | -8.615850e-47 |
| Msa0803890 | Msa0979010 | 0.816849 | 4.472462e-52 | -8.615850e-47 |
| Msa0824660 | Msa0979010 | 0.817312 | 3.519277e-52 | -8.615850e-47 |
| Msa0824680 | Msa0979010 | 0.814618 | 1.405613e-51 | -8.615850e-47 |
| Msa0140570 | Msa0979010 | 0.800743 | 1.248918e-48 | -8.615850e-47 |
| Msa0157290 | Msa0979010 | 0.833448 | 5.303404e-56 | -8.615850e-47 |
| Msa0173990 | Msa0979010 | 0.812416 | 4.287695e-51 | -8.615850e-47 |
| Msa0175780 | Msa0979010 | 0.808890 | 2.479565e-50 | -8.615850e-47 |
| Msa0184020 | Msa0979010 | 0.811958 | 5.395510e-51 | -8.615850e-47 |
| Msa0186890 | Msa0979010 | 0.820302 | 7.368410e-53 | -8.615850e-47 |
| Msa0191050 | Msa0979010 | 0.804042 | 2.611323e-49 | -8.615850e-47 |
| Msa0197660 | Msa0979010 | 0.803695 | 3.083157e-49 | -8.615850e-47 |
| Msa0202950 | Msa0979010 | 0.801000 | 1.106739e-48 | -8.615850e-47 |
| Msa0205850 | Msa0979010 | 0.802872 | 4.564177e-49 | -8.615850e-47 |
| Msa0218780 | Msa0979010 | 0.805567 | 1.254225e-49 | -8.615850e-47 |
| Msa0225740 | Msa0979010 | 0.808827 | 2.557200e-50 | -8.615850e-47 |
| Msa0233350 | Msa0979010 | 0.805461 | 1.320457e-49 | -8.615850e-47 |
| Msa0366240 | Msa0979010 | 0.808928 | 2.433132e-50 | -8.615850e-47 |
| Msa0372660 | Msa0979010 | 0.817391 | 3.379397e-52 | -8.615850e-47 |
| Msa0402330 | Msa0979010 | 0.815374 | 9.554136e-52 | -8.615850e-47 |
| Msa0402650 | Msa0979010 | 0.817066 | 3.997531e-52 | -8.615850e-47 |
| Msa0408400 | Msa0979010 | 0.802149 | 6.432645e-49 | -8.615850e-47 |
| Msa0410650 | Msa0979010 | 0.808626 | 2.824360e-50 | -8.615850e-47 |
| Msa0417270 | Msa0979010 | 0.807278 | 5.465510e-50 | -8.615850e-47 |
| Msa0419820 | Msa0979010 | 0.812286 | 4.576887e-51 | -8.615850e-47 |
| Msa0420840 | Msa0979010 | 0.813303 | 2.739948e-51 | -8.615850e-47 |
| Msa0425010 | Msa0979010 | 0.800937 | 1.140316e-48 | -8.615850e-47 |
| Msa0432770 | Msa0979010 | 0.801332 | 9.466605e-49 | -8.615850e-47 |
| Msa0433640 | Msa0979010 | 0.804458 | 2.139292e-49 | -8.615850e-47 |
| Msa0436050 | Msa0979010 | 0.852877 | 3.460566e-61 | -8.615850e-47 |
| Msa0479170 | Msa0979010 | 0.800940 | 1.138291e-48 | -8.615850e-47 |
| Msa0239800 | Msa0979010 | 0.806795 | 6.913865e-50 | -8.615850e-47 |
| Msa0279790 | Msa0979010 | 0.800633 | 1.315010e-48 | -8.615850e-47 |
| Msa0280090 | Msa0979010 | 0.802959 | 4.379820e-49 | -8.615850e-47 |
| Msa0284420 | Msa0979010 | 0.805926 | 1.054321e-49 | -8.615850e-47 |
| Msa0306300 | Msa0979010 | 0.809147 | 2.184344e-50 | -8.615850e-47 |
| Msa0311420 | Msa0979010 | 0.806978 | 6.324756e-50 | -8.615850e-47 |
| Msa0317510 | Msa0979010 | 0.801067 | 1.072603e-48 | -8.615850e-47 |
| Msa0320100 | Msa0979010 | 0.800775 | 1.230109e-48 | -8.615850e-47 |
| Msa0329320 | Msa0979010 | 0.802748 | 4.842984e-49 | -8.615850e-47 |
| Msa0337620 | Msa0979010 | 0.810356 | 1.200592e-50 | -8.615850e-47 |
| Msa0341050 | Msa0979010 | 0.804482 | 2.114877e-49 | -8.615850e-47 |
| Msa0355270 | Msa0979010 | 0.811846 | 5.707490e-51 | -8.615850e-47 |
| Msa0363360 | Msa0979010 | 0.802529 | 5.371960e-49 | -8.615850e-47 |
| Msa0483860 | Msa0979010 | 0.803699 | 3.077128e-49 | -8.615850e-47 |
| Msa0484780 | Msa0979010 | 0.824801 | 6.629174e-54 | -8.615850e-47 |
| Msa0495320 | Msa0979010 | 0.808266 | 3.369460e-50 | -8.615850e-47 |
| Msa0501460 | Msa0979010 | 0.826914 | 2.088304e-54 | -8.615850e-47 |
| Msa0503580 | Msa0979010 | 0.810694 | 1.014742e-50 | -8.615850e-47 |
| Msa0507680 | Msa0979010 | 0.820529 | 6.538232e-53 | -8.615850e-47 |
| Msa0516320 | Msa0979010 | 0.814929 | 1.199314e-51 | -8.615850e-47 |
| Msa0523460 | Msa0979010 | 0.810744 | 9.900000e-51 | -8.615850e-47 |
| Msa0541860 | Msa0979010 | 0.822060 | 2.898529e-53 | -8.615850e-47 |
| Msa0546680 | Msa0979010 | 0.835488 | 1.630097e-56 | -8.615850e-47 |
| Msa0569200 | Msa0979010 | 0.800801 | 1.215271e-48 | -8.615850e-47 |
| Msa0574890 | Msa0979010 | 0.800344 | 1.506453e-48 | -8.615850e-47 |
| Msa0577220 | Msa0979010 | 0.808200 | 3.481350e-50 | -8.615850e-47 |
| Msa0593650 | Msa0979010 | 0.807728 | 4.387313e-50 | -8.615850e-47 |
| Msa0601290 | Msa0979010 | 0.815152 | 1.070177e-51 | -8.615850e-47 |
| Msa0602310 | Msa0979010 | 0.807259 | 5.516122e-50 | -8.615850e-47 |
| Msa0871270 | Msa0979010 | 0.804576 | 2.022069e-49 | -8.615850e-47 |
| Msa0876200 | Msa0979010 | 0.834746 | 2.508157e-56 | -8.615850e-47 |
| Msa0876660 | Msa0979010 | 0.836395 | 9.594785e-57 | -8.615850e-47 |
| Msa0880140 | Msa0979010 | 0.830461 | 2.899084e-55 | -8.615850e-47 |
| Msa0888580 | Msa0979010 | 0.815588 | 8.561378e-52 | -8.615850e-47 |
| Msa0902750 | Msa0979010 | 0.828569 | 8.358430e-55 | -8.615850e-47 |
| Msa0902760 | Msa0979010 | 0.823302 | 1.490224e-53 | -8.615850e-47 |
| Msa0938220 | Msa0979010 | 0.804215 | 2.403788e-49 | -8.615850e-47 |
| Msa0968590 | Msa0979010 | 0.813510 | 2.468344e-51 | -8.615850e-47 |
| Msa0979010 | Msa0979730 | 0.840850 | 6.782416e-58 | -8.615850e-47 |
| Msa0979010 | Msa1003750 | 0.801546 | 8.555090e-49 | -8.615850e-47 |
| Msa0979010 | Msa1013400 | 0.833463 | 5.255831e-56 | -8.615850e-47 |
| Msa0979010 | Msa1014540 | 0.803642 | 3.162009e-49 | -8.615850e-47 |
| Msa0979010 | Msa1023400 | 0.810893 | 9.189347e-51 | -8.615850e-47 |
| Msa0979010 | Msa1065390 | 0.800624 | 1.320619e-48 | -8.615850e-47 |
| Msa0979010 | Msa1066490 | 0.818057 | 2.390347e-52 | -8.615850e-47 |
| Msa0979010 | Msa1079590 | 0.816991 | 4.156010e-52 | -8.615850e-47 |
| Msa0979010 | Msa1081150 | 0.812271 | 4.609954e-51 | -8.615850e-47 |
| Msa0979010 | Msa1082500 | 0.839898 | 1.202883e-57 | -8.615850e-47 |
| Msa0979010 | Msa1085200 | 0.810784 | 9.702220e-51 | -8.615850e-47 |
| Msa0979010 | Msa1093520 | 0.802486 | 5.484628e-49 | -8.615850e-47 |
| Msa0979010 | Msa1093530 | 0.822726 | 2.029794e-53 | -8.615850e-47 |
| Msa0979010 | Msa1125760 | 0.800847 | 1.189432e-48 | -8.615850e-47 |
| Msa0979010 | Msa1127890 | 0.800346 | 1.504801e-48 | -8.615850e-47 |
| Msa0979010 | Msa1131220 | 0.821885 | 3.183169e-53 | -8.615850e-47 |
| Msa0979010 | Msa1142020 | 0.813642 | 2.308289e-51 | -8.615850e-47 |
| Msa0979010 | Msa1151910 | 0.801793 | 7.614402e-49 | -8.615850e-47 |
| Msa0979010 | Msa1165520 | 0.820258 | 7.543171e-53 | -8.615850e-47 |
| Msa0979010 | Msa1168160 | 0.803025 | 4.244990e-49 | -8.615850e-47 |
| Msa0979010 | Msa1178170 | 0.814937 | 1.194466e-51 | -8.615850e-47 |
| Msa0979010 | Msa1181860 | 0.806545 | 7.809647e-50 | -8.615850e-47 |
| Msa0979010 | Msa1187840 | 0.827790 | 1.288063e-54 | -8.615850e-47 |
| Msa0979010 | Msa1201120 | 0.805683 | 1.185701e-49 | -8.615850e-47 |
| Msa0979010 | Msa1209010 | 0.800302 | 1.536086e-48 | -8.615850e-47 |
| Msa0979010 | Msa1209460 | 0.811835 | 5.738511e-51 | -8.615850e-47 |
| Msa0979010 | Msa1218600 | 0.813775 | 2.157350e-51 | -8.615850e-47 |
| Msa0979010 | Msa1227400 | 0.817812 | 2.715359e-52 | -8.615850e-47 |
| Msa0979010 | Msa1236100 | 0.820138 | 8.034863e-53 | -8.615850e-47 |
| Msa0979010 | Msa1238470 | 0.807724 | 4.394858e-50 | -8.615850e-47 |
| Msa0979010 | Msa1238930 | 0.812718 | 3.682026e-51 | -8.615850e-47 |
| Msa0979010 | Msa1251730 | 0.822235 | 2.640038e-53 | -8.615850e-47 |
| Msa0979010 | Msa1255040 | -0.800700 | 1.274571e-48 | -8.615850e-47 |
| Msa0979010 | Msa1264020 | 0.806803 | 6.889591e-50 | -8.615850e-47 |
| Msa0979010 | Msa1270610 | 0.820134 | 8.050886e-53 | -8.615850e-47 |
| Msa0979010 | Msa1270680 | 0.815766 | 7.812308e-52 | -8.615850e-47 |
| Msa0979010 | Msa1271990 | 0.810025 | 1.414705e-50 | -8.615850e-47 |
| Msa0979010 | Msa1281180 | 0.820163 | 7.931566e-53 | -8.615850e-47 |
| Msa0979010 | Msa1283170 | 0.807042 | 6.130507e-50 | -8.615850e-47 |
| Msa0979010 | Msa1283860 | 0.817931 | 2.552924e-52 | -8.615850e-47 |
| Msa0979010 | Msa1289280 | 0.802359 | 5.825627e-49 | -8.615850e-47 |
| Msa0979010 | Msa1294480 | 0.810760 | 9.821479e-51 | -8.615850e-47 |
| Msa0979010 | Msa1308380 | 0.803723 | 3.042203e-49 | -8.615850e-47 |
| Msa0979010 | Msa1316780 | 0.825978 | 3.490415e-54 | -8.615850e-47 |
| Msa0979010 | Msa1316830 | 0.817400 | 3.363338e-52 | -8.615850e-47 |
| Msa0979010 | Msa1320410 | 0.810985 | 8.776909e-51 | -8.615850e-47 |
| Msa0979010 | Msa1336710 | 0.804541 | 2.055532e-49 | -8.615850e-47 |
| Msa0979010 | Msa1340020 | 0.810981 | 8.797107e-51 | -8.615850e-47 |
| Msa0979010 | Msa1353060 | 0.801748 | 7.779338e-49 | -8.615850e-47 |
| Msa0979010 | Msa1371430 | 0.815259 | 1.013384e-51 | -8.615850e-47 |
| Msa0979010 | Msa1392200 | 0.805152 | 1.532379e-49 | -8.615850e-47 |
| Msa0979010 | Msa1397810 | 0.818364 | 2.037668e-52 | -8.615850e-47 |
| Msa0979010 | Msa1415640 | 0.803193 | 3.917554e-49 | -8.615850e-47 |
| Msa0979010 | Msa1417870 | 0.800935 | 1.141185e-48 | -8.615850e-47 |
| Msa0979010 | Msa1424450 | 0.807294 | 5.422163e-50 | -8.615850e-47 |
| Msa0979010 | Msa1427060 | 0.805212 | 1.488370e-49 | -8.615850e-47 |
| Msa0979010 | Msa1454120 | 0.801059 | 1.076607e-48 | -8.615850e-47 |
| Msa0979010 | Msa1460050 | 0.804623 | 1.976570e-49 | -8.615850e-47 |
| Msa0979010 | Msa1464810 | 0.803040 | 4.214520e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979010 | MtrunA17_Chr6g0457871 | 90.556 | 360 | 0 | 2 | 1 | 345 | 55 | 395 | 0.0 | 646 |
| Msa0979010 | MtrunA17_Chr3g0079771 | 77.778 | 360 | 46 | 2 | 1 | 345 | 48 | 388 | 0.0 | 518 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979010 | AT1G13560.3 | 74.167 | 360 | 59 | 2 | 1 | 345 | 1 | 341 | 0.0 | 547 |
| Msa0979010 | AT1G13560.1 | 74.167 | 360 | 59 | 2 | 1 | 345 | 49 | 389 | 0.0 | 546 |
| Msa0979010 | AT1G13560.2 | 73.889 | 360 | 60 | 2 | 1 | 345 | 6 | 346 | 0.0 | 546 |
| Msa0979010 | AT3G25585.6 | 71.667 | 360 | 68 | 2 | 1 | 345 | 1 | 341 | 0.0 | 520 |
| Msa0979010 | AT3G25585.5 | 71.667 | 360 | 68 | 2 | 1 | 345 | 1 | 341 | 0.0 | 520 |
| Msa0979010 | AT3G25585.4 | 71.667 | 360 | 68 | 2 | 1 | 345 | 49 | 389 | 0.0 | 520 |
| Msa0979010 | AT3G25585.1 | 71.667 | 360 | 68 | 2 | 1 | 345 | 49 | 389 | 0.0 | 520 |
| Msa0979010 | AT3G25585.2 | 71.667 | 360 | 68 | 2 | 1 | 345 | 49 | 389 | 0.0 | 520 |
| Msa0979010 | AT3G25585.3 | 71.348 | 356 | 68 | 2 | 5 | 345 | 1 | 337 | 0.0 | 513 |
Find 113 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTTTGAAGCACTTGCTTT+TGG | 0.146979 | 6_4:-15325701 | Msa0979010:CDS |
| CTTGGTTACTGTGCATTTAC+AGG | 0.204431 | 6_4:-15322768 | Msa0979010:intron |
| ATCCTCATTACTCGGCATTT+TGG | 0.219811 | 6_4:-15326928 | Msa0979010:five_prime_UTR |
| CTGATACTTCCTGTTGTAAA+TGG | 0.239203 | 6_4:-15325404 | Msa0979010:CDS |
| GACAACTAAATGTGGATAAT+TGG | 0.245221 | 6_4:+15324019 | None:intergenic |
| AGCTTTAATATGAATTTAAA+AGG | 0.245275 | 6_4:-15321190 | Msa0979010:three_prime_UTR |
| CAGTGTTATCAATGTTTATA+AGG | 0.272486 | 6_4:-15324311 | Msa0979010:CDS |
| AATGAGAGACTAGTTCTTCT+TGG | 0.279735 | 6_4:-15322786 | Msa0979010:CDS |
| CATTTAGTTGTCATGGGAAC+TGG | 0.293650 | 6_4:-15324008 | Msa0979010:CDS |
| AAGCAAAGGTTTACCATGTT+TGG | 0.294075 | 6_4:+15326885 | None:intergenic |
| AATCTACCAAGATTTCATTT+AGG | 0.298754 | 6_4:-15321737 | Msa0979010:intron |
| CGAATTCTTCAAGTCCATTA+GGG | 0.318784 | 6_4:-15325936 | Msa0979010:CDS |
| GAATGGTGGGCTCAGCAATT+TGG | 0.323501 | 6_4:-15325040 | Msa0979010:CDS |
| ACGAATTCTTCAAGTCCATT+AGG | 0.326269 | 6_4:-15325937 | Msa0979010:CDS |
| GAGAACTACTGGCAAGGTTT+TGG | 0.326313 | 6_4:-15321326 | Msa0979010:three_prime_UTR |
| CTCCCTATACCTTAAGGATA+TGG | 0.326593 | 6_4:+15327093 | None:intergenic |
| CATTGTTATGTATCTTCATC+TGG | 0.334336 | 6_4:-15327161 | Msa0979010:five_prime_UTR |
| TTATGTATTGATTCTTAGAT+AGG | 0.338868 | 6_4:-15321270 | Msa0979010:three_prime_UTR |
| TAGCCATATCCTTAAGGTAT+AGG | 0.343351 | 6_4:-15327096 | Msa0979010:five_prime_UTR |
| CCCTGGGAATATATTGCTTC+AGG | 0.345121 | 6_4:-15322375 | Msa0979010:intron |
| ATGAGGATATATGAAATAAA+AGG | 0.360489 | 6_4:+15326943 | None:intergenic |
| TATCCGTTTGTTGTCCTTGT+CGG | 0.376290 | 6_4:-15324168 | Msa0979010:CDS |
| ATGGGAACTGGGCTTACTTT+CGG | 0.380940 | 6_4:-15323996 | Msa0979010:CDS |
| ACCCTACAAAACTAAGTTGA+TGG | 0.381419 | 6_4:+15327275 | None:intergenic |
| AGAGTCTTACCAGAAATAAA+AGG | 0.386724 | 6_4:+15324989 | None:intergenic |
| GGCATACCTAAATGAAATCT+TGG | 0.392925 | 6_4:+15321731 | None:intergenic |
| TCACTCATAAACACTTCATT+AGG | 0.402310 | 6_4:+15327305 | None:intergenic |
| TTGTGTTTGATGATAGCTTT+TGG | 0.409890 | 6_4:-15324597 | Msa0979010:CDS |
| CCAGATATACTCACCTCAAT+TGG | 0.413495 | 6_4:-15326473 | Msa0979010:intron |
| TGATCGAACAGCTCCCCTAA+TGG | 0.416067 | 6_4:+15325922 | None:intergenic |
| CTACTATTGTCTGCATTGCT+TGG | 0.420160 | 6_4:-15326744 | Msa0979010:CDS |
| TGTTCCATTGCAGGATAACT+AGG | 0.421949 | 6_4:-15321771 | Msa0979010:intron |
| TGTGTGGAAGAAGTACTTTC+TGG | 0.423309 | 6_4:-15325667 | Msa0979010:CDS |
| AGCCATATCCTTAAGGTATA+GGG | 0.425534 | 6_4:-15327095 | Msa0979010:five_prime_UTR |
| AAGGTTGTGAAGTCGAGAAA+TGG | 0.434652 | 6_4:-15324292 | Msa0979010:CDS |
| CTTAAGGTATAGGGAGGGTT+TGG | 0.438961 | 6_4:-15327086 | Msa0979010:five_prime_UTR |
| CAAACCCTCCCTATACCTTA+AGG | 0.451584 | 6_4:+15327087 | None:intergenic |
| CAAGGTTAGCCATATCCTTA+AGG | 0.458327 | 6_4:-15327102 | Msa0979010:five_prime_UTR |
| TTCTACAGGTGCTGAATGGT+GGG | 0.460804 | 6_4:-15325053 | Msa0979010:intron |
| TTTCTACAGGTGCTGAATGG+TGG | 0.462100 | 6_4:-15325054 | Msa0979010:intron |
| ACAATATAGCACTGTATGTC+GGG | 0.464539 | 6_4:+15324616 | None:intergenic |
| TAGACATTTGATGCTGTTGA+TGG | 0.466711 | 6_4:-15325976 | Msa0979010:CDS |
| TTATCCACATTTAGTTGTCA+TGG | 0.467060 | 6_4:-15324015 | Msa0979010:CDS |
| TATTGATTCTTAGATAGGTT+AGG | 0.473920 | 6_4:-15321265 | Msa0979010:three_prime_UTR |
| TCCGTAGGTCCATTTACAAC+AGG | 0.488560 | 6_4:+15325395 | None:intergenic |
| GTTGTCACTTGAAGATAAGA+TGG | 0.491646 | 6_4:+15321112 | None:intergenic |
| TTGCAAGTCAAGAGAACTAC+TGG | 0.491956 | 6_4:-15321337 | Msa0979010:three_prime_UTR |
| ACCTGAAGCAATATATTCCC+AGG | 0.495698 | 6_4:+15322374 | None:intergenic |
| TGTGCAAAATGAACCCATCT+TGG | 0.496233 | 6_4:+15326439 | None:intergenic |
| AACAGGAAGTATCAGTGTAT+TGG | 0.501512 | 6_4:+15325412 | None:intergenic |
| TTTGTTCCAGATAACTCTGA+TGG | 0.504877 | 6_4:-15326778 | Msa0979010:intron |
| TTAGGGGAGCTGTTCGATCA+TGG | 0.507201 | 6_4:-15325919 | Msa0979010:intron |
| AGGTATAGGGAGGGTTTGGC+GGG | 0.508832 | 6_4:-15327082 | Msa0979010:five_prime_UTR |
| TATCCACATTTAGTTGTCAT+GGG | 0.514355 | 6_4:-15324014 | Msa0979010:CDS |
| ACTAGTCTCTCATTAACTAA+AGG | 0.516957 | 6_4:+15322795 | None:intergenic |
| ATTTAGTTGTCATGGGAACT+GGG | 0.520723 | 6_4:-15324007 | Msa0979010:CDS |
| TTTGCAGAAACAGAATCATC+AGG | 0.523125 | 6_4:+15322454 | None:intergenic |
| GGTTGAGTTAGGTCCACATT+GGG | 0.523834 | 6_4:-15327338 | None:intergenic |
| TCATGAAATTACGAATGCCC+TGG | 0.523889 | 6_4:-15322392 | Msa0979010:CDS |
| GCTTACTTTCGGATATCTTG+TGG | 0.528578 | 6_4:-15323985 | Msa0979010:intron |
| TCCTGTTGTAAATGGACCTA+CGG | 0.530088 | 6_4:-15325396 | Msa0979010:CDS |
| TGGACACAGCTCCTCCAAGA+TGG | 0.531879 | 6_4:-15326453 | Msa0979010:CDS |
| CACAATATAGCACTGTATGT+CGG | 0.544277 | 6_4:+15324615 | None:intergenic |
| CCTCCGACAAGGACAACAAA+CGG | 0.544347 | 6_4:+15324165 | None:intergenic |
| TTGTCGGAGGAGTGCTTATG+TGG | 0.545286 | 6_4:-15324152 | Msa0979010:intron |
| CTAGTTTAAACGAGCACGCA+AGG | 0.549280 | 6_4:-15327120 | Msa0979010:five_prime_UTR |
| CCGTTTGTTGTCCTTGTCGG+AGG | 0.551272 | 6_4:-15324165 | Msa0979010:CDS |
| CACTTATGTGATGAACCAAA+AGG | 0.551574 | 6_4:-15323333 | Msa0979010:CDS |
| CTTGCATCAAGGCTAAATGA+TGG | 0.552012 | 6_4:-15322923 | Msa0979010:CDS |
| TTGCTAATGCACTTGCATCA+AGG | 0.554145 | 6_4:-15322934 | Msa0979010:CDS |
| AAGGTATAGGGAGGGTTTGG+CGG | 0.557159 | 6_4:-15327083 | Msa0979010:five_prime_UTR |
| CATGAAATTACGAATGCCCT+GGG | 0.561598 | 6_4:-15322391 | Msa0979010:CDS |
| GGGTTGAGTTAGGTCCACAT+TGG | 0.564231 | 6_4:-15327339 | None:intergenic |
| TTGCTCCTCATGGGAAGCCA+AGG | 0.565202 | 6_4:+15321090 | None:intergenic |
| TTGTTCCAGATAACTCTGAT+GGG | 0.566961 | 6_4:-15326777 | Msa0979010:intron |
| GGACACAGCTCCTCCAAGAT+GGG | 0.571189 | 6_4:-15326452 | Msa0979010:CDS |
| TAACATGAATATATTCATAG+TGG | 0.572401 | 6_4:+15321212 | None:intergenic |
| CAGAAACAGAATCATCAGGC+AGG | 0.573364 | 6_4:+15322458 | None:intergenic |
| TTTCATATATCCTCATTACT+CGG | 0.575130 | 6_4:-15326936 | Msa0979010:five_prime_UTR |
| TAGGTTAGGAGATTTATTTG+TGG | 0.577074 | 6_4:-15321251 | Msa0979010:three_prime_UTR |
| GGAGGAGCTGTGTCCAATTG+AGG | 0.580594 | 6_4:+15326460 | None:intergenic |
| TTATCTTCAAGTGACAACCT+TGG | 0.583764 | 6_4:-15321107 | Msa0979010:three_prime_UTR |
| TTGCATCAAGGCTAAATGAT+GGG | 0.587433 | 6_4:-15322922 | Msa0979010:intron |
| GCAAAATGAACCCATCTTGG+AGG | 0.587784 | 6_4:+15326442 | None:intergenic |
| AATTGTAGGATAATTAAACA+AGG | 0.588895 | 6_4:+15327012 | None:intergenic |
| CTTACCATTGCTAACGCAAG+AGG | 0.592076 | 6_4:+15324262 | None:intergenic |
| AGCCAAAATGCCGAGTAATG+AGG | 0.593183 | 6_4:+15326926 | None:intergenic |
| AGACATTTGATGCTGTTGAT+GGG | 0.598242 | 6_4:-15325975 | Msa0979010:CDS |
| GAAGAAGTACTTTCTGGTGG+TGG | 0.603104 | 6_4:-15325661 | Msa0979010:CDS |
| TGATGCAAGTGCATTAGCAA+TGG | 0.604002 | 6_4:+15322937 | None:intergenic |
| CCATTGCAGGATAACTAGGA+AGG | 0.604804 | 6_4:-15321767 | Msa0979010:intron |
| CATATCCTTAAGGTATAGGG+AGG | 0.610457 | 6_4:-15327092 | Msa0979010:five_prime_UTR |
| TATGCCTCTTGCGTTAGCAA+TGG | 0.621209 | 6_4:-15324266 | Msa0979010:intron |
| TGGCAAGTGGTAGATACATG+AGG | 0.625727 | 6_4:+15322957 | None:intergenic |
| ATTGTAGGATAATTAAACAA+GGG | 0.629038 | 6_4:+15327013 | None:intergenic |
| GTTGTAAATGGACCTACGGA+GGG | 0.637088 | 6_4:-15325392 | Msa0979010:intron |
| ACATACTTGAGTGCGACGGT+TGG | 0.638301 | 6_4:+15324567 | None:intergenic |
| GAATTCTTCAAGTCCATTAG+GGG | 0.640800 | 6_4:-15325935 | Msa0979010:CDS |
| CTATACATACTTGAGTGCGA+CGG | 0.648516 | 6_4:+15324563 | None:intergenic |
| GGCAAGTGGTAGATACATGA+GGG | 0.648543 | 6_4:+15322958 | None:intergenic |
| TTTGGGAGCACATCCATGTG+TGG | 0.648878 | 6_4:-15325683 | Msa0979010:CDS |
| GTTCCCATGACAACTAAATG+TGG | 0.649879 | 6_4:+15324011 | None:intergenic |
| CCTGAAGCAATATATTCCCA+GGG | 0.650536 | 6_4:+15322375 | None:intergenic |
| AGGTCTTATCTCACCCAATG+TGG | 0.650886 | 6_4:+15327325 | None:intergenic |
| ACATAAGCACTCCTCCGACA+AGG | 0.651566 | 6_4:+15324154 | None:intergenic |
| GAAAGTACTTCTTCCACACA+TGG | 0.654787 | 6_4:+15325670 | None:intergenic |
| AGTCAAGAGAACTACTGGCA+AGG | 0.657706 | 6_4:-15321332 | Msa0979010:three_prime_UTR |
| ATATCCTTAAGGTATAGGGA+GGG | 0.670837 | 6_4:-15327091 | Msa0979010:five_prime_UTR |
| AGTGCATTAGCAATGGCAAG+TGG | 0.672892 | 6_4:+15322944 | None:intergenic |
| TGTTGTAAATGGACCTACGG+AGG | 0.673487 | 6_4:-15325393 | Msa0979010:CDS |
| TAATTGGCTATGATGTCAGA+TGG | 0.673929 | 6_4:+15324035 | None:intergenic |
| ATTATCATAAGACCCTCCGT+AGG | 0.691029 | 6_4:+15325380 | None:intergenic |
| GTGGAAGAAGTACTTTCTGG+TGG | 0.727462 | 6_4:-15325664 | Msa0979010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAATAACTTATGTAAA+TGG | - | chr6_4:15323229-15323248 | Msa0979010:intron | 10.0% |
| !! | AATATTTCTTACAAAATAAA+TGG | + | chr6_4:15323608-15323627 | None:intergenic | 10.0% |
| !! | TTAACATTATTATTATCTAT+TGG | - | chr6_4:15324085-15324104 | Msa0979010:intron | 10.0% |
| !! | TTGAAAATTTATTAATATCA+GGG | - | chr6_4:15325873-15325892 | Msa0979010:intron | 10.0% |
| !! | AAATTAATCAGCAATATTAA+AGG | + | chr6_4:15321861-15321880 | None:intergenic | 15.0% |
| !! | AATATAGGAACTAAATAAAA+AGG | + | chr6_4:15322151-15322170 | None:intergenic | 15.0% |
| !!! | ATTTTTGTTAAAGATTCTTA+TGG | - | chr6_4:15322367-15322386 | Msa0979010:intron | 15.0% |
| !! | TAATAACAGAATGAAAAATA+CGG | + | chr6_4:15322546-15322565 | None:intergenic | 15.0% |
| !!! | TTAGTATACTTCTAAAATTA+TGG | - | chr6_4:15324973-15324992 | Msa0979010:intron | 15.0% |
| !! | TAATATCTCTTTAATGAATT+TGG | + | chr6_4:15325390-15325409 | None:intergenic | 15.0% |
| !! | AATTAAATAACATCAATCAA+CGG | + | chr6_4:15325558-15325577 | None:intergenic | 15.0% |
| !!! | GAAATTGTTTGATATATTTT+TGG | - | chr6_4:15325601-15325620 | Msa0979010:intron | 15.0% |
| !! | CTTGAAAATTTATTAATATC+AGG | - | chr6_4:15325872-15325891 | Msa0979010:intron | 15.0% |
| !!! | AGCTTTAATATGAATTTAAA+AGG | - | chr6_4:15327236-15327255 | Msa0979010:five_prime_UTR | 15.0% |
| !! | CATACATTAAAAATAAAAAG+AGG | + | chr6_4:15327268-15327287 | None:intergenic | 15.0% |
| !!! | CTCTTTTTATTTTTAATGTA+TGG | - | chr6_4:15327266-15327285 | Msa0979010:five_prime_UTR | 15.0% |
| !! | ATTGTAGGATAATTAAACAA+GGG | + | chr6_4:15321416-15321435 | None:intergenic | 20.0% |
| !! | AATTGTAGGATAATTAAACA+AGG | + | chr6_4:15321417-15321436 | None:intergenic | 20.0% |
| !! | ATGAGGATATATGAAATAAA+AGG | + | chr6_4:15321486-15321505 | None:intergenic | 20.0% |
| !! | GCAAAATAAAAATTAATGTG+AGG | + | chr6_4:15321785-15321804 | None:intergenic | 20.0% |
| !!! | ACAATGAAATCAGAAATTTT+TGG | - | chr6_4:15321815-15321834 | Msa0979010:intron | 20.0% |
| !!! | AATATTGCTGATTAATTTCA+TGG | - | chr6_4:15321863-15321882 | Msa0979010:intron | 20.0% |
| !!! | ATAAAGAAGTCTTTTGAAAT+TGG | - | chr6_4:15322123-15322142 | Msa0979010:intron | 20.0% |
| !! | CACGATATTTCTTTAAATAT+AGG | + | chr6_4:15322166-15322185 | None:intergenic | 20.0% |
| !!! | ATATTTTTGACTATATTGCA+GGG | - | chr6_4:15322605-15322624 | Msa0979010:intron | 20.0% |
| !!! | ATGACATTATTTTCTTTTGA+TGG | + | chr6_4:15322689-15322708 | None:intergenic | 20.0% |
| !! | TATCTGCATAAATATCTAAA+AGG | + | chr6_4:15323195-15323214 | None:intergenic | 20.0% |
| !!! | TGTTGTAATTATTTTTCTAC+AGG | - | chr6_4:15323359-15323378 | Msa0979010:intron | 20.0% |
| !! | CATTACTTGAAAATGATTAT+TGG | - | chr6_4:15323702-15323721 | Msa0979010:intron | 20.0% |
| !!! | TGATTTTTGAAATTTCTTTC+CGG | - | chr6_4:15323776-15323795 | Msa0979010:intron | 20.0% |
| !! | AATTTACTAACGAAATTATG+TGG | + | chr6_4:15324873-15324892 | None:intergenic | 20.0% |
| !! | TTACAGTAACATTTATCTTA+TGG | - | chr6_4:15325579-15325598 | Msa0979010:intron | 20.0% |
| !!! | ATTGATGATTTTCAATTTCA+TGG | + | chr6_4:15325763-15325782 | None:intergenic | 20.0% |
| !!! | ATCAATTACGTTTATTCTTT+TGG | - | chr6_4:15325777-15325796 | Msa0979010:intron | 20.0% |
| !! | AAATTTATTAATATCAGGGA+TGG | - | chr6_4:15325877-15325896 | Msa0979010:intron | 20.0% |
| !!! | TTTTTGTTGAACTTTGTTTT+TGG | - | chr6_4:15326187-15326206 | Msa0979010:intron | 20.0% |
| !! | AAGTATATATGTATTCATGT+CGG | - | chr6_4:15326381-15326400 | Msa0979010:intron | 20.0% |
| !! | ATCTGAGAAAAAATTATGTT+CGG | + | chr6_4:15326894-15326913 | None:intergenic | 20.0% |
| !!! | TTATGTATTGATTCTTAGAT+AGG | - | chr6_4:15327156-15327175 | Msa0979010:five_prime_UTR | 20.0% |
| !! | TAACATGAATATATTCATAG+TGG | + | chr6_4:15327217-15327236 | None:intergenic | 20.0% |
| ! | TTTCATATATCCTCATTACT+CGG | - | chr6_4:15321490-15321509 | Msa0979010:intron | 25.0% |
| ! | CAGATGATACTACAAAATAA+AGG | + | chr6_4:15321567-15321586 | None:intergenic | 25.0% |
| !!! | TTATGGATTAGGATGATTAA+TGG | + | chr6_4:15321729-15321748 | None:intergenic | 25.0% |
| !! | CTATTATGTTTTCGACTTTA+TGG | + | chr6_4:15321746-15321765 | None:intergenic | 25.0% |
| ! | TAAAAATTAATGTGAGGAAC+AGG | + | chr6_4:15321779-15321798 | None:intergenic | 25.0% |
| ! | TTGGTTAAATTCTCATATTG+TGG | - | chr6_4:15322036-15322055 | Msa0979010:intron | 25.0% |
| ! | AGCATGAAATTTACCAAAAT+CGG | + | chr6_4:15322082-15322101 | None:intergenic | 25.0% |
| ! | CTAAAACACTTCCATAAATA+CGG | - | chr6_4:15322267-15322286 | Msa0979010:intron | 25.0% |
| ! | GATTCTTATGGTTTATCAAT+AGG | - | chr6_4:15322379-15322398 | Msa0979010:CDS | 25.0% |
| !!! | GATATTTTTGACTATATTGC+AGG | - | chr6_4:15322604-15322623 | Msa0979010:intron | 25.0% |
| !! | ATATCTGCAGTTACATTTTA+TGG | - | chr6_4:15322791-15322810 | Msa0979010:CDS | 25.0% |
| ! | TCAAATACAATGCTATATAC+AGG | + | chr6_4:15322852-15322871 | None:intergenic | 25.0% |
| ! | CTACATCTATTCTAACAATT+CGG | - | chr6_4:15322896-15322915 | Msa0979010:intron | 25.0% |
| ! | CGAGATAAAGAATATAAAGA+CGG | + | chr6_4:15323463-15323482 | None:intergenic | 25.0% |
| ! | CGTCTTTATATTCTTTATCT+CGG | - | chr6_4:15323461-15323480 | Msa0979010:intron | 25.0% |
| !!! | ATTGTTTCAGGTTTAAAAGT+TGG | + | chr6_4:15323968-15323987 | None:intergenic | 25.0% |
| !! | AACCTGAAACAATTTCTTTT+AGG | - | chr6_4:15323975-15323994 | Msa0979010:intron | 25.0% |
| ! | AACCTAAAAGAAATTGTTTC+AGG | + | chr6_4:15323980-15323999 | None:intergenic | 25.0% |
| ! | AATAAGTATACAGAAACACA+AGG | + | chr6_4:15324032-15324051 | None:intergenic | 25.0% |
| ! | TTTACGAAGTTATTTGATGA+AGG | - | chr6_4:15324050-15324069 | Msa0979010:CDS | 25.0% |
| ! | CAGTGTTATCAATGTTTATA+AGG | - | chr6_4:15324115-15324134 | Msa0979010:intron | 25.0% |
| ! | TTATAGGAAAGAATTCCAAT+AGG | + | chr6_4:15324197-15324216 | None:intergenic | 25.0% |
| !! | TACTTAAATGATTTTGTTGC+AGG | - | chr6_4:15324356-15324375 | Msa0979010:intron | 25.0% |
| !! | ACTTAAATGATTTTGTTGCA+GGG | - | chr6_4:15324357-15324376 | Msa0979010:intron | 25.0% |
| !!! | TTGGATAAACAGCTTATTTT+AGG | - | chr6_4:15324545-15324564 | Msa0979010:intron | 25.0% |
| ! | ATCTATTAGCATAAGCAATT+GGG | + | chr6_4:15324768-15324787 | None:intergenic | 25.0% |
| ! | TATCTATTAGCATAAGCAAT+TGG | + | chr6_4:15324769-15324788 | None:intergenic | 25.0% |
| !!! | TGGTATTAAGCTGTTTTATT+TGG | - | chr6_4:15325136-15325155 | Msa0979010:intron | 25.0% |
| ! | TTACTTCATTAGATACTCAT+AGG | + | chr6_4:15325265-15325284 | None:intergenic | 25.0% |
| !!! | TTGTTTGATATATTTTTGGC+AGG | - | chr6_4:15325605-15325624 | Msa0979010:intron | 25.0% |
| !!! | TGTTTGATATATTTTTGGCA+GGG | - | chr6_4:15325606-15325625 | Msa0979010:intron | 25.0% |
| ! | TGCAATATCAATGATTAAAC+CGG | + | chr6_4:15325693-15325712 | None:intergenic | 25.0% |
| ! | CAACTTGCGAAAATTTAAAA+CGG | - | chr6_4:15325736-15325755 | Msa0979010:intron | 25.0% |
| ! | ATTAGTGTCTAATGTATTGT+TGG | - | chr6_4:15326092-15326111 | Msa0979010:intron | 25.0% |
| !! | GGTGTCTTTATTAAGAATTT+TGG | - | chr6_4:15326465-15326484 | Msa0979010:CDS | 25.0% |
| ! | ACAACTATATGTGTATCATT+TGG | - | chr6_4:15326496-15326515 | Msa0979010:intron | 25.0% |
| ! | AATCTACCAAGATTTCATTT+AGG | - | chr6_4:15326689-15326708 | Msa0979010:intron | 25.0% |
| ! | TCAACCAATGAATTAGAAAA+GGG | + | chr6_4:15326719-15326738 | None:intergenic | 25.0% |
| !!! | TAATTCATTGGTTGAGTTTT+TGG | - | chr6_4:15326724-15326743 | Msa0979010:intron | 25.0% |
| !! | AGAGAAAATCAATTTTACTC+GGG | + | chr6_4:15326826-15326845 | None:intergenic | 25.0% |
| !! | GAGAGAAAATCAATTTTACT+CGG | + | chr6_4:15326827-15326846 | None:intergenic | 25.0% |
| !!! | AATTGATTTTCTCTCTAGAA+TGG | - | chr6_4:15326832-15326851 | Msa0979010:intron | 25.0% |
| ! | AAAAGTGAATCAACAAAACA+TGG | + | chr6_4:15327054-15327073 | None:intergenic | 25.0% |
| !! | TCAATACTAATTTTGCTACA+AGG | - | chr6_4:15327123-15327142 | Msa0979010:five_prime_UTR | 25.0% |
| !!! | TATTGATTCTTAGATAGGTT+AGG | - | chr6_4:15327161-15327180 | Msa0979010:five_prime_UTR | 25.0% |
| TCACTCATAAACACTTCATT+AGG | + | chr6_4:15321124-15321143 | None:intergenic | 30.0% | |
| !!! | ATCCATCAACTTAGTTTTGT+AGG | - | chr6_4:15321149-15321168 | Msa0979010:three_prime_UTR | 30.0% |
| !!! | TCCATCAACTTAGTTTTGTA+GGG | - | chr6_4:15321150-15321169 | Msa0979010:three_prime_UTR | 30.0% |
| CATTGTTATGTATCTTCATC+TGG | - | chr6_4:15321265-15321284 | Msa0979010:three_prime_UTR | 30.0% | |
| CTACAAAATAAAGGAAGCAA+AGG | + | chr6_4:15321558-15321577 | None:intergenic | 30.0% | |
| ACGATCATAAGCTATATCAT+TGG | - | chr6_4:15321604-15321623 | Msa0979010:intron | 30.0% | |
| ! | TGTTTTCGACTTTATGGATT+AGG | + | chr6_4:15321740-15321759 | None:intergenic | 30.0% |
| ! | AAGTTTTCGATACATGTTTG+TGG | - | chr6_4:15321908-15321927 | Msa0979010:intron | 30.0% |
| !!! | GCTACTTTTGTTTTTATACC+AGG | - | chr6_4:15322013-15322032 | Msa0979010:intron | 30.0% |
| !!! | CTTTTGTTTTTATACCAGGT+TGG | - | chr6_4:15322017-15322036 | Msa0979010:intron | 30.0% |
| ATATGAGAATTTAACCAACC+TGG | + | chr6_4:15322034-15322053 | None:intergenic | 30.0% | |
| TCACTATCTAGAGATCATAT+TGG | - | chr6_4:15322213-15322232 | Msa0979010:intron | 30.0% | |
| AAAGCTTAACACCGTATTTA+TGG | + | chr6_4:15322281-15322300 | None:intergenic | 30.0% | |
| CTTGGCGAGAATAAAAAAAT+AGG | + | chr6_4:15322311-15322330 | None:intergenic | 30.0% | |
| !!! | CTATTTTTTTATTCTCGCCA+AGG | - | chr6_4:15322309-15322328 | Msa0979010:intron | 30.0% |
| !!! | GTATGTCTCTTTTAGCTTTT+TGG | - | chr6_4:15322649-15322668 | Msa0979010:intron | 30.0% |
| CGAATTGTTAGAATAGATGT+AGG | + | chr6_4:15322898-15322917 | None:intergenic | 30.0% | |
| ACCATAAAAACTCACAGAAA+GGG | + | chr6_4:15323109-15323128 | None:intergenic | 30.0% | |
| TACCATAAAAACTCACAGAA+AGG | + | chr6_4:15323110-15323129 | None:intergenic | 30.0% | |
| TGTAAATGGTGAGATCTTAT+TGG | - | chr6_4:15323243-15323262 | Msa0979010:intron | 30.0% | |
| ACAACAATAACAATACGCAT+TGG | + | chr6_4:15323345-15323364 | None:intergenic | 30.0% | |
| !!! | AGTCTTTGCCTTTTTTGAAT+TGG | - | chr6_4:15323411-15323430 | Msa0979010:intron | 30.0% |
| AAAGGCAACCAATTCAAAAA+AGG | + | chr6_4:15323422-15323441 | None:intergenic | 30.0% | |
| !! | AATTGGTTGCCTTTTATTTC+TGG | - | chr6_4:15323428-15323447 | Msa0979010:intron | 30.0% |
| AGAGTCTTACCAGAAATAAA+AGG | + | chr6_4:15323440-15323459 | None:intergenic | 30.0% | |
| ATATTCTTTATCTCGGACAA+AGG | - | chr6_4:15323468-15323487 | Msa0979010:intron | 30.0% | |
| !! | AGAAATATTAGTTCTATCGC+CGG | - | chr6_4:15323619-15323638 | Msa0979010:intron | 30.0% |
| TTGTGTAAACCAGATCATAT+TGG | + | chr6_4:15323661-15323680 | None:intergenic | 30.0% | |
| !! | TTGTGTTTGATGATAGCTTT+TGG | - | chr6_4:15323829-15323848 | Msa0979010:intron | 30.0% |
| !! | ATGGTAAGACTTTTTCCTAT+TGG | - | chr6_4:15324179-15324198 | Msa0979010:intron | 30.0% |
| TGGAATTCTTTCCTATAATC+TGG | - | chr6_4:15324199-15324218 | Msa0979010:intron | 30.0% | |
| CAACAAAGTAACCAGATTAT+AGG | + | chr6_4:15324213-15324232 | None:intergenic | 30.0% | |
| ! | TAATCTGGTTACTTTGTTGA+TGG | - | chr6_4:15324214-15324233 | Msa0979010:intron | 30.0% |
| GACAACTAAATGTGGATAAT+TGG | + | chr6_4:15324410-15324429 | None:intergenic | 30.0% | |
| TTATCCACATTTAGTTGTCA+TGG | - | chr6_4:15324411-15324430 | Msa0979010:intron | 30.0% | |
| TATCCACATTTAGTTGTCAT+GGG | - | chr6_4:15324412-15324431 | Msa0979010:intron | 30.0% | |
| TACAAAACTCAACAGTTCTA+CGG | + | chr6_4:15324488-15324507 | None:intergenic | 30.0% | |
| !! | AGTTTTGTAAGATAGCTTCT+AGG | - | chr6_4:15324499-15324518 | Msa0979010:intron | 30.0% |
| ! | GTTTTGTAAGATAGCTTCTA+GGG | - | chr6_4:15324500-15324519 | Msa0979010:intron | 30.0% |
| ATAAGCTGTTTATCCAAACA+AGG | + | chr6_4:15324542-15324561 | None:intergenic | 30.0% | |
| ATAAGCTGTTTATCCAAACA+AGG | + | chr6_4:15324542-15324561 | None:intergenic | 30.0% | |
| ACAACTTATGACATATCCAT+TGG | + | chr6_4:15324720-15324739 | None:intergenic | 30.0% | |
| AAGAAATTGACGAAGTCTAA+GGG | + | chr6_4:15324818-15324837 | None:intergenic | 30.0% | |
| TAAGAAATTGACGAAGTCTA+AGG | + | chr6_4:15324819-15324838 | None:intergenic | 30.0% | |
| GTATACTAAGAAACTACCAA+GGG | + | chr6_4:15324962-15324981 | None:intergenic | 30.0% | |
| AGTATACTAAGAAACTACCA+AGG | + | chr6_4:15324963-15324982 | None:intergenic | 30.0% | |
| AGGAGTTAGATTGTACATAA+AGG | + | chr6_4:15325016-15325035 | None:intergenic | 30.0% | |
| TCAGTAAAAGTCATACTGTA+AGG | + | chr6_4:15325036-15325055 | None:intergenic | 30.0% | |
| !! | ATTCCAGTTTTTAAGCCTTT+TGG | + | chr6_4:15325111-15325130 | None:intergenic | 30.0% |
| ! | ACTAGTCTCTCATTAACTAA+AGG | + | chr6_4:15325634-15325653 | None:intergenic | 30.0% |
| GCAATATCAATGATTAAACC+GGG | + | chr6_4:15325692-15325711 | None:intergenic | 30.0% | |
| GGTTTAATCATTGATATTGC+AGG | - | chr6_4:15325692-15325711 | Msa0979010:CDS | 30.0% | |
| ! | TTAAATTTTCGCAAGTTGTG+TGG | + | chr6_4:15325734-15325753 | None:intergenic | 30.0% |
| ! | GTTTTCTATGCTACTATATG+TGG | - | chr6_4:15326131-15326150 | Msa0979010:intron | 30.0% |
| !!! | AACTTTGTTTTTGGAACAGT+TGG | - | chr6_4:15326196-15326215 | Msa0979010:intron | 30.0% |
| !!! | GATGTGTCAAAGGTTTTTTT+AGG | + | chr6_4:15326301-15326320 | None:intergenic | 30.0% |
| AAAAAACCTTTGACACATCT+TGG | - | chr6_4:15326302-15326321 | Msa0979010:intron | 30.0% | |
| AAAGAGAAAAAACCACACTT+AGG | + | chr6_4:15326440-15326459 | None:intergenic | 30.0% | |
| !!! | GTGGTTTTTTCTCTTTTGTT+TGG | - | chr6_4:15326444-15326463 | Msa0979010:CDS | 30.0% |
| ! | TATGCCCTTTTCTAATTCAT+TGG | - | chr6_4:15326712-15326731 | Msa0979010:intron | 30.0% |
| CTCAACCAATGAATTAGAAA+AGG | + | chr6_4:15326720-15326739 | None:intergenic | 30.0% | |
| !! | TGAGTTTTTGGACATTTTCT+TGG | - | chr6_4:15326736-15326755 | Msa0979010:intron | 30.0% |
| ! | TACTTGTCCAAAATCACTTT+TGG | + | chr6_4:15326778-15326797 | None:intergenic | 30.0% |
| ATGGATTCTAGCACAAAATT+AGG | - | chr6_4:15326851-15326870 | Msa0979010:intron | 30.0% | |
| TGAGAAAAAATTATGTTCGG+AGG | + | chr6_4:15326891-15326910 | None:intergenic | 30.0% | |
| TAGGTTAGGAGATTTATTTG+TGG | - | chr6_4:15327175-15327194 | Msa0979010:five_prime_UTR | 30.0% | |
| TATGGTTCCATCTTCAAAAA+AGG | - | chr6_4:15327284-15327303 | Msa0979010:five_prime_UTR | 30.0% | |
| TTCCATCTTCAAAAAAGGTA+TGG | - | chr6_4:15327289-15327308 | Msa0979010:five_prime_UTR | 30.0% | |
| !!! | AACCATACCTTTTTTGAAGA+TGG | + | chr6_4:15327294-15327313 | None:intergenic | 30.0% |
| ! | ACCCTACAAAACTAAGTTGA+TGG | + | chr6_4:15321154-15321173 | None:intergenic | 35.0% |
| !!! | TAGTTTTGTAGGGTTGATTC+AGG | - | chr6_4:15321160-15321179 | Msa0979010:three_prime_UTR | 35.0% |
| TAGCCATATCCTTAAGGTAT+AGG | - | chr6_4:15321330-15321349 | Msa0979010:three_prime_UTR | 35.0% | |
| AGCCATATCCTTAAGGTATA+GGG | - | chr6_4:15321331-15321350 | Msa0979010:three_prime_UTR | 35.0% | |
| ATATCCTTAAGGTATAGGGA+GGG | - | chr6_4:15321335-15321354 | Msa0979010:three_prime_UTR | 35.0% | |
| ! | GATATTTTGCAGTCCAAACA+TGG | - | chr6_4:15321528-15321547 | Msa0979010:intron | 35.0% |
| AAGCAAAGGTTTACCATGTT+TGG | + | chr6_4:15321544-15321563 | None:intergenic | 35.0% | |
| TTTGTTCCAGATAACTCTGA+TGG | - | chr6_4:15321648-15321667 | Msa0979010:intron | 35.0% | |
| TTGTTCCAGATAACTCTGAT+GGG | - | chr6_4:15321649-15321668 | Msa0979010:intron | 35.0% | |
| TAAATCCCATCAGAGTTATC+TGG | + | chr6_4:15321657-15321676 | None:intergenic | 35.0% | |
| !! | TTAGGATGATTAATGGACTC+AGG | + | chr6_4:15321722-15321741 | None:intergenic | 35.0% |
| !! | CTCTTGATGTTAACCGATTT+TGG | - | chr6_4:15322066-15322085 | Msa0979010:intron | 35.0% |
| TGAGAGTCGCACAAAAAAAA+AGG | + | chr6_4:15322196-15322215 | None:intergenic | 35.0% | |
| !! | AAAGTGTGTTTTTCAGTCCT+TGG | + | chr6_4:15322329-15322348 | None:intergenic | 35.0% |
| TAGACATTTGATGCTGTTGA+TGG | - | chr6_4:15322450-15322469 | Msa0979010:CDS | 35.0% | |
| AGACATTTGATGCTGTTGAT+GGG | - | chr6_4:15322451-15322470 | Msa0979010:CDS | 35.0% | |
| ACGAATTCTTCAAGTCCATT+AGG | - | chr6_4:15322489-15322508 | Msa0979010:intron | 35.0% | |
| CGAATTCTTCAAGTCCATTA+GGG | - | chr6_4:15322490-15322509 | Msa0979010:intron | 35.0% | |
| GAATTCTTCAAGTCCATTAG+GGG | - | chr6_4:15322491-15322510 | Msa0979010:intron | 35.0% | |
| CAGAATGAAAAATACGGTGA+AGG | + | chr6_4:15322540-15322559 | None:intergenic | 35.0% | |
| !! | AGTTTGAAGCACTTGCTTTT+GGG | - | chr6_4:15322726-15322745 | Msa0979010:intron | 35.0% |
| CTATATACAGGACAAGAACA+TGG | + | chr6_4:15322840-15322859 | None:intergenic | 35.0% | |
| TTCTAACAATTCGGCATGAT+CGG | - | chr6_4:15322905-15322924 | Msa0979010:intron | 35.0% | |
| !! | AACAGGAAGTATCAGTGTAT+TGG | + | chr6_4:15323017-15323036 | None:intergenic | 35.0% |
| CTGATACTTCCTGTTGTAAA+TGG | - | chr6_4:15323022-15323041 | Msa0979010:intron | 35.0% | |
| !! | GTTTAATTTGCATGCACTGA+TGG | + | chr6_4:15323294-15323313 | None:intergenic | 35.0% |
| !!! | ATTTTTCTACAGGTGCTGAA+TGG | - | chr6_4:15323369-15323388 | Msa0979010:intron | 35.0% |
| TGGACAAGCATAATTAACAC+CGG | + | chr6_4:15323641-15323660 | None:intergenic | 35.0% | |
| TATGCTTGTCCAATATGATC+TGG | - | chr6_4:15323649-15323668 | Msa0979010:intron | 35.0% | |
| TGCTCGACTATATCATTTGA+AGG | + | chr6_4:15323684-15323703 | None:intergenic | 35.0% | |
| ACAATATAGCACTGTATGTC+GGG | + | chr6_4:15323813-15323832 | None:intergenic | 35.0% | |
| CACAATATAGCACTGTATGT+CGG | + | chr6_4:15323814-15323833 | None:intergenic | 35.0% | |
| AATGCAGAAACTTTATGCCA+AGG | + | chr6_4:15323940-15323959 | None:intergenic | 35.0% | |
| TAATTGGCTATGATGTCAGA+TGG | + | chr6_4:15324394-15324413 | None:intergenic | 35.0% | |
| ATTTAGTTGTCATGGGAACT+GGG | - | chr6_4:15324419-15324438 | Msa0979010:intron | 35.0% | |
| !!! | AGCTTATTTTAGGCCTTGTT+TGG | - | chr6_4:15324555-15324574 | Msa0979010:intron | 35.0% |
| TCATAAACTATCACAGCCAA+TGG | - | chr6_4:15324701-15324720 | Msa0979010:intron | 35.0% | |
| TAAGCAATTGGGAAACTGTT+TGG | + | chr6_4:15324757-15324776 | None:intergenic | 35.0% | |
| ! | TGATAGAAGCTCAATTTTGC+AGG | - | chr6_4:15325053-15325072 | Msa0979010:intron | 35.0% |
| ! | GATAGAAGCTCAATTTTGCA+GGG | - | chr6_4:15325054-15325073 | Msa0979010:intron | 35.0% |
| GAACCAAAAGGCTTAAAAAC+TGG | - | chr6_4:15325105-15325124 | Msa0979010:intron | 35.0% | |
| CTTAAAAACTGGAATGTGCA+TGG | - | chr6_4:15325116-15325135 | Msa0979010:intron | 35.0% | |
| TTGCATCAAGGCTAAATGAT+GGG | - | chr6_4:15325504-15325523 | Msa0979010:intron | 35.0% | |
| ! | AATGAGAGACTAGTTCTTCT+TGG | - | chr6_4:15325640-15325659 | Msa0979010:CDS | 35.0% |
| CATTTACAGGTACATATACC+CGG | - | chr6_4:15325671-15325690 | Msa0979010:CDS | 35.0% | |
| TTTGCAGAAACAGAATCATC+AGG | + | chr6_4:15325975-15325994 | None:intergenic | 35.0% | |
| ! | TTGATAACTTGTGCTTGCTA+TGG | - | chr6_4:15326572-15326591 | Msa0979010:intron | 35.0% |
| ! | CTTTTCTATTGTTCCATTGC+AGG | - | chr6_4:15326646-15326665 | Msa0979010:intron | 35.0% |
| GGCATACCTAAATGAAATCT+TGG | + | chr6_4:15326698-15326717 | None:intergenic | 35.0% | |
| ! | GTGAAAGCCAAAAGTGATTT+TGG | - | chr6_4:15326768-15326787 | Msa0979010:CDS | 35.0% |
| AATCAACAAAACATGGAGAG+AGG | + | chr6_4:15327047-15327066 | None:intergenic | 35.0% | |
| ! | GTTGTCACTTGAAGATAAGA+TGG | + | chr6_4:15327317-15327336 | None:intergenic | 35.0% |
| TTATCTTCAAGTGACAACCT+TGG | - | chr6_4:15327319-15327338 | Msa0979010:five_prime_UTR | 35.0% | |
| ! | CAAGGTTAGCCATATCCTTA+AGG | - | chr6_4:15321324-15321343 | Msa0979010:three_prime_UTR | 40.0% |
| CTCCCTATACCTTAAGGATA+TGG | + | chr6_4:15321336-15321355 | None:intergenic | 40.0% | |
| CATATCCTTAAGGTATAGGG+AGG | - | chr6_4:15321334-15321353 | Msa0979010:three_prime_UTR | 40.0% | |
| ! | ATCCTCATTACTCGGCATTT+TGG | - | chr6_4:15321498-15321517 | Msa0979010:intron | 40.0% |
| CTACTATTGTCTGCATTGCT+TGG | - | chr6_4:15321682-15321701 | Msa0979010:intron | 40.0% | |
| CCAATTGAGGTGAGTATATC+TGG | + | chr6_4:15321956-15321975 | None:intergenic | 40.0% | |
| CCAGATATACTCACCTCAAT+TGG | - | chr6_4:15321953-15321972 | Msa0979010:intron | 40.0% | |
| TGTGCAAAATGAACCCATCT+TGG | + | chr6_4:15321990-15322009 | None:intergenic | 40.0% | |
| !! | AGATGGGTTCATTTTGCACA+CGG | - | chr6_4:15321990-15322009 | Msa0979010:intron | 40.0% |
| ATCGGTTAACATCAAGAGAC+TGG | + | chr6_4:15322064-15322083 | None:intergenic | 40.0% | |
| TTAGTGCACTCATCTTGACT+CGG | + | chr6_4:15322251-15322270 | None:intergenic | 40.0% | |
| !! | CAGTTTGAAGCACTTGCTTT+TGG | - | chr6_4:15322725-15322744 | Msa0979010:intron | 40.0% |
| !! | GAAAGTACTTCTTCCACACA+TGG | + | chr6_4:15322759-15322778 | None:intergenic | 40.0% |
| !! | TGTGTGGAAGAAGTACTTTC+TGG | - | chr6_4:15322759-15322778 | Msa0979010:intron | 40.0% |
| ! | TTACATTTTATGGCGCAACG+TGG | - | chr6_4:15322801-15322820 | Msa0979010:CDS | 40.0% |
| ! | TACATTTTATGGCGCAACGT+GGG | - | chr6_4:15322802-15322821 | Msa0979010:CDS | 40.0% |
| TCCTGTTGTAAATGGACCTA+CGG | - | chr6_4:15323030-15323049 | Msa0979010:intron | 40.0% | |
| ATTATCATAAGACCCTCCGT+AGG | + | chr6_4:15323049-15323068 | None:intergenic | 40.0% | |
| ! | GCCCTTTCTGTGAGTTTTTA+TGG | - | chr6_4:15323105-15323124 | Msa0979010:intron | 40.0% |
| CTATACATACTTGAGTGCGA+CGG | + | chr6_4:15323866-15323885 | None:intergenic | 40.0% | |
| CTTTATGCCAAGGACTAATG+TGG | + | chr6_4:15323930-15323949 | None:intergenic | 40.0% | |
| AAGGTTGTGAAGTCGAGAAA+TGG | - | chr6_4:15324134-15324153 | Msa0979010:intron | 40.0% | |
| !! | TATCCGTTTGTTGTCCTTGT+CGG | - | chr6_4:15324258-15324277 | Msa0979010:intron | 40.0% |
| !!! | AGACGCGTCATTTTTGTTTC+TGG | - | chr6_4:15324311-15324330 | Msa0979010:CDS | 40.0% |
| GTTCCCATGACAACTAAATG+TGG | + | chr6_4:15324418-15324437 | None:intergenic | 40.0% | |
| CATTTAGTTGTCATGGGAAC+TGG | - | chr6_4:15324418-15324437 | Msa0979010:intron | 40.0% | |
| GCTTACTTTCGGATATCTTG+TGG | - | chr6_4:15324441-15324460 | Msa0979010:intron | 40.0% | |
| !! | TAAGATAGCTTCTAGGGTTG+AGG | - | chr6_4:15324506-15324525 | Msa0979010:intron | 40.0% |
| TTTGCTTGCCACTATGATTG+TGG | - | chr6_4:15324924-15324943 | Msa0979010:intron | 40.0% | |
| TAAGAAACTACCAAGGGAAG+TGG | + | chr6_4:15324956-15324975 | None:intergenic | 40.0% | |
| ! | TAACAAAGCCTTTTCGTGCT+AGG | + | chr6_4:15325241-15325260 | None:intergenic | 40.0% |
| TGATGCAAGTGCATTAGCAA+TGG | + | chr6_4:15325492-15325511 | None:intergenic | 40.0% | |
| TTGCTAATGCACTTGCATCA+AGG | - | chr6_4:15325492-15325511 | Msa0979010:intron | 40.0% | |
| CTTGCATCAAGGCTAAATGA+TGG | - | chr6_4:15325503-15325522 | Msa0979010:intron | 40.0% | |
| CTTGGTTACTGTGCATTTAC+AGG | - | chr6_4:15325658-15325677 | Msa0979010:CDS | 40.0% | |
| TGTGTGGAGTAAATTGTTCG+AGG | + | chr6_4:15325718-15325737 | None:intergenic | 40.0% | |
| TCATGAAATTACGAATGCCC+TGG | - | chr6_4:15326034-15326053 | Msa0979010:intron | 40.0% | |
| CATGAAATTACGAATGCCCT+GGG | - | chr6_4:15326035-15326054 | Msa0979010:intron | 40.0% | |
| CCTGAAGCAATATATTCCCA+GGG | + | chr6_4:15326054-15326073 | None:intergenic | 40.0% | |
| ACCTGAAGCAATATATTCCC+AGG | + | chr6_4:15326055-15326074 | None:intergenic | 40.0% | |
| AAGCATCCAAGATGTGTCAA+AGG | + | chr6_4:15326311-15326330 | None:intergenic | 40.0% | |
| CACACTTAGGACCTATAATG+CGG | + | chr6_4:15326427-15326446 | None:intergenic | 40.0% | |
| TGTTCCATTGCAGGATAACT+AGG | - | chr6_4:15326655-15326674 | Msa0979010:intron | 40.0% | |
| !! | GAGGAAATGGATTGTGTGTT+TGG | + | chr6_4:15327028-15327047 | None:intergenic | 40.0% |
| CAAAACATGGAGAGAGGAAA+TGG | + | chr6_4:15327041-15327060 | None:intergenic | 40.0% | |
| TTGCAAGTCAAGAGAACTAC+TGG | - | chr6_4:15327089-15327108 | Msa0979010:five_prime_UTR | 40.0% | |
| ! | AGGTCTTATCTCACCCAATG+TGG | + | chr6_4:15321104-15321123 | None:intergenic | 45.0% |
| CTAGTTTAAACGAGCACGCA+AGG | - | chr6_4:15321306-15321325 | Msa0979010:three_prime_UTR | 45.0% | |
| CAAACCCTCCCTATACCTTA+AGG | + | chr6_4:15321342-15321361 | None:intergenic | 45.0% | |
| CTTAAGGTATAGGGAGGGTT+TGG | - | chr6_4:15321340-15321359 | Msa0979010:three_prime_UTR | 45.0% | |
| GTTTGGCGGGAATGAAAAAG+AGG | - | chr6_4:15321357-15321376 | Msa0979010:intron | 45.0% | |
| AGCCAAAATGCCGAGTAATG+AGG | + | chr6_4:15321503-15321522 | None:intergenic | 45.0% | |
| GCAAAATGAACCCATCTTGG+AGG | + | chr6_4:15321987-15322006 | None:intergenic | 45.0% | |
| !! | GATGGGTTCATTTTGCACAC+GGG | - | chr6_4:15321991-15322010 | Msa0979010:intron | 45.0% |
| !! | GTGGAAGAAGTACTTTCTGG+TGG | - | chr6_4:15322762-15322781 | Msa0979010:intron | 45.0% |
| !! | GAAGAAGTACTTTCTGGTGG+TGG | - | chr6_4:15322765-15322784 | Msa0979010:intron | 45.0% |
| TCCGTAGGTCCATTTACAAC+AGG | + | chr6_4:15323034-15323053 | None:intergenic | 45.0% | |
| TGTTGTAAATGGACCTACGG+AGG | - | chr6_4:15323033-15323052 | Msa0979010:intron | 45.0% | |
| GTTGTAAATGGACCTACGGA+GGG | - | chr6_4:15323034-15323053 | Msa0979010:intron | 45.0% | |
| CAGCAGTGAAAAAGTGACAG+AGG | + | chr6_4:15323075-15323094 | None:intergenic | 45.0% | |
| !!! | CACTTTTTCACTGCTGTCGT+TGG | - | chr6_4:15323079-15323098 | Msa0979010:intron | 45.0% |
| !! | TTTCTACAGGTGCTGAATGG+TGG | - | chr6_4:15323372-15323391 | Msa0979010:intron | 45.0% |
| !! | TTCTACAGGTGCTGAATGGT+GGG | - | chr6_4:15323373-15323392 | Msa0979010:intron | 45.0% |
| ! | ATGTCGGGACATCTGAAATC+CGG | + | chr6_4:15323798-15323817 | None:intergenic | 45.0% |
| CACAGTACCACATTAGTCCT+TGG | - | chr6_4:15323920-15323939 | Msa0979010:intron | 45.0% | |
| TATGCCTCTTGCGTTAGCAA+TGG | - | chr6_4:15324160-15324179 | Msa0979010:CDS | 45.0% | |
| CTTACCATTGCTAACGCAAG+AGG | + | chr6_4:15324167-15324186 | None:intergenic | 45.0% | |
| ATGGGAACTGGGCTTACTTT+CGG | - | chr6_4:15324430-15324449 | Msa0979010:intron | 45.0% | |
| !! | ATAGCTTCTAGGGTTGAGGT+AGG | - | chr6_4:15324510-15324529 | Msa0979010:intron | 45.0% |
| GTCTAAGGGTCTGTTTGCAT+TGG | + | chr6_4:15324804-15324823 | None:intergenic | 45.0% | |
| CTTGCCACTATGATTGTGGT+AGG | - | chr6_4:15324928-15324947 | Msa0979010:intron | 45.0% | |
| GGAACCTACCACAATCATAG+TGG | + | chr6_4:15324935-15324954 | None:intergenic | 45.0% | |
| ! | GAAGCTCAATTTTGCAGGGA+AGG | - | chr6_4:15325058-15325077 | Msa0979010:intron | 45.0% |
| CGTTCATGACGTGTTCATGA+CGG | - | chr6_4:15325322-15325341 | Msa0979010:intron | 45.0% | |
| GGCAAGTGGTAGATACATGA+GGG | + | chr6_4:15325471-15325490 | None:intergenic | 45.0% | |
| TGGCAAGTGGTAGATACATG+AGG | + | chr6_4:15325472-15325491 | None:intergenic | 45.0% | |
| AGTGCATTAGCAATGGCAAG+TGG | + | chr6_4:15325485-15325504 | None:intergenic | 45.0% | |
| CAGAAACAGAATCATCAGGC+AGG | + | chr6_4:15325971-15325990 | None:intergenic | 45.0% | |
| CCCTGGGAATATATTGCTTC+AGG | - | chr6_4:15326051-15326070 | Msa0979010:intron | 45.0% | |
| CTTGTCCTAAGCTATGTGTC+CGG | - | chr6_4:15326225-15326244 | Msa0979010:intron | 45.0% | |
| TTGTCCTAAGCTATGTGTCC+GGG | - | chr6_4:15326226-15326245 | Msa0979010:intron | 45.0% | |
| TGTCCGACAGACAAACAACT+CGG | - | chr6_4:15326267-15326286 | Msa0979010:intron | 45.0% | |
| TGTCCGAGTTGTTTGTCTGT+CGG | + | chr6_4:15326273-15326292 | None:intergenic | 45.0% | |
| ATGCGGCGACATACATGATA+TGG | + | chr6_4:15326410-15326429 | None:intergenic | 45.0% | |
| CATGTATGTCGCCGCATTAT+AGG | - | chr6_4:15326413-15326432 | Msa0979010:intron | 45.0% | |
| CGCATTATAGGTCCTAAGTG+TGG | - | chr6_4:15326425-15326444 | Msa0979010:CDS | 45.0% | |
| CCTTCCTAGTTATCCTGCAA+TGG | + | chr6_4:15326662-15326681 | None:intergenic | 45.0% | |
| CCATTGCAGGATAACTAGGA+AGG | - | chr6_4:15326659-15326678 | Msa0979010:intron | 45.0% | |
| !! | GGATTGTGTGTTTGGTTCTG+CGG | + | chr6_4:15327020-15327039 | None:intergenic | 45.0% |
| AGTCAAGAGAACTACTGGCA+AGG | - | chr6_4:15327094-15327113 | Msa0979010:five_prime_UTR | 45.0% | |
| ! | GAGAACTACTGGCAAGGTTT+TGG | - | chr6_4:15327100-15327119 | Msa0979010:five_prime_UTR | 45.0% |
| !! | AATAAAAATAAAAAAATTGT+AGG | + | chr6_4:15321431-15321450 | None:intergenic | 5.0% |
| !! | TACAAAAAATAAAAATATTA+GGG | + | chr6_4:15323557-15323576 | None:intergenic | 5.0% |
| !! | ATACAAAAAATAAAAATATT+AGG | + | chr6_4:15323558-15323577 | None:intergenic | 5.0% |
| !!! | ATATTTTTATTTTTTGTATA+TGG | - | chr6_4:15323559-15323578 | Msa0979010:intron | 5.0% |
| AAGGTATAGGGAGGGTTTGG+CGG | - | chr6_4:15321343-15321362 | Msa0979010:intron | 50.0% | |
| TGATCGAACAGCTCCCCTAA+TGG | + | chr6_4:15322507-15322526 | None:intergenic | 50.0% | |
| TTAGGGGAGCTGTTCGATCA+TGG | - | chr6_4:15322507-15322526 | Msa0979010:intron | 50.0% | |
| ! | TTTGGGAGCACATCCATGTG+TGG | - | chr6_4:15322743-15322762 | Msa0979010:intron | 50.0% |
| !! | GAATGGTGGGCTCAGCAATT+TGG | - | chr6_4:15323386-15323405 | Msa0979010:intron | 50.0% |
| ACATACTTGAGTGCGACGGT+TGG | + | chr6_4:15323862-15323881 | None:intergenic | 50.0% | |
| CCTCCGACAAGGACAACAAA+CGG | + | chr6_4:15324264-15324283 | None:intergenic | 50.0% | |
| ACATAAGCACTCCTCCGACA+AGG | + | chr6_4:15324275-15324294 | None:intergenic | 50.0% | |
| !! | TTGTCGGAGGAGTGCTTATG+TGG | - | chr6_4:15324274-15324293 | Msa0979010:CDS | 50.0% |
| ! | TCTAGGGTTGAGGTAGGCTT+AGG | - | chr6_4:15324516-15324535 | Msa0979010:intron | 50.0% |
| !! | AGGTAGGCTTAGGCCTTGTT+TGG | - | chr6_4:15324526-15324545 | Msa0979010:intron | 50.0% |
| ! | CTTTTCGTGCTAGGTGGAGT+CGG | + | chr6_4:15325232-15325251 | None:intergenic | 50.0% |
| ! | CAAAGCCTTTTCGTGCTAGG+TGG | + | chr6_4:15325238-15325257 | None:intergenic | 50.0% |
| CTGACACATGTTTGCCAACC+CGG | + | chr6_4:15326247-15326266 | None:intergenic | 50.0% | |
| AGGTATAGGGAGGGTTTGGC+GGG | - | chr6_4:15321344-15321363 | Msa0979010:intron | 55.0% | |
| GGAGGAGCTGTGTCCAATTG+AGG | + | chr6_4:15321969-15321988 | None:intergenic | 55.0% | |
| TGGACACAGCTCCTCCAAGA+TGG | - | chr6_4:15321973-15321992 | Msa0979010:intron | 55.0% | |
| GGACACAGCTCCTCCAAGAT+GGG | - | chr6_4:15321974-15321993 | Msa0979010:intron | 55.0% | |
| !! | CCGTTTGTTGTCCTTGTCGG+AGG | - | chr6_4:15324261-15324280 | Msa0979010:intron | 55.0% |
| GTGGTAGGTTCCACTTCCCT+TGG | - | chr6_4:15324943-15324962 | Msa0979010:intron | 55.0% | |
| GCTAGGTGGAGTCGGTTACA+TGG | + | chr6_4:15325224-15325243 | None:intergenic | 55.0% | |
| CGACTCCACCTAGCACGAAA+AGG | - | chr6_4:15325230-15325249 | Msa0979010:intron | 55.0% | |
| CCAACCCGGACACATAGCTT+AGG | + | chr6_4:15326233-15326252 | None:intergenic | 55.0% | |
| CCTAAGCTATGTGTCCGGGT+TGG | - | chr6_4:15326230-15326249 | Msa0979010:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 15321100 | 15327348 | 15321100 | ID=Msa0979010;Name=Msa0979010 |
| chr6_4 | mRNA | 15321100 | 15327348 | 15321100 | ID=Msa0979010-mRNA-1;Parent=Msa0979010;Name=Msa0979010-mRNA-1;_AED=0.15;_eAED=0.15;_QI=447|0.88|0.88|1|0.82|0.83|18|282|345 |
| chr6_4 | exon | 15321100 | 15321360 | 15321100 | ID=Msa0979010-mRNA-1:exon:5024;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15321738 | 15321780 | 15321738 | ID=Msa0979010-mRNA-1:exon:5023;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15322376 | 15322505 | 15322376 | ID=Msa0979010-mRNA-1:exon:5022;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15322769 | 15322821 | 15322769 | ID=Msa0979010-mRNA-1:exon:5021;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15322923 | 15322981 | 15322923 | ID=Msa0979010-mRNA-1:exon:5020;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15323311 | 15323373 | 15323311 | ID=Msa0979010-mRNA-1:exon:5019;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15323986 | 15324070 | 15323986 | ID=Msa0979010-mRNA-1:exon:5018;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15324153 | 15324193 | 15324153 | ID=Msa0979010-mRNA-1:exon:5017;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15324267 | 15324330 | 15324267 | ID=Msa0979010-mRNA-1:exon:5016;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15324573 | 15324642 | 15324573 | ID=Msa0979010-mRNA-1:exon:5015;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15324999 | 15325067 | 15324999 | ID=Msa0979010-mRNA-1:exon:5014;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15325393 | 15325442 | 15325393 | ID=Msa0979010-mRNA-1:exon:5013;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15325620 | 15325720 | 15325620 | ID=Msa0979010-mRNA-1:exon:5012;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15325800 | 15325822 | 15325800 | ID=Msa0979010-mRNA-1:exon:5011;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15325920 | 15325995 | 15325920 | ID=Msa0979010-mRNA-1:exon:5010;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15326414 | 15326491 | 15326414 | ID=Msa0979010-mRNA-1:exon:5009;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15326740 | 15326790 | 15326740 | ID=Msa0979010-mRNA-1:exon:5008;Parent=Msa0979010-mRNA-1 |
| chr6_4 | exon | 15326899 | 15327348 | 15326899 | ID=Msa0979010-mRNA-1:exon:5007;Parent=Msa0979010-mRNA-1 |
| chr6_4 | five_prime_UTR | 15326902 | 15327348 | 15326902 | ID=Msa0979010-mRNA-1:five_prime_utr;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15326899 | 15326901 | 15326899 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15326740 | 15326790 | 15326740 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15326414 | 15326491 | 15326414 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15325920 | 15325995 | 15325920 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15325800 | 15325822 | 15325800 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15325620 | 15325720 | 15325620 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15325393 | 15325442 | 15325393 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15324999 | 15325067 | 15324999 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15324573 | 15324642 | 15324573 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15324267 | 15324330 | 15324267 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15324153 | 15324193 | 15324153 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15323986 | 15324070 | 15323986 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15323311 | 15323373 | 15323311 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15322923 | 15322981 | 15322923 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15322769 | 15322821 | 15322769 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15322376 | 15322505 | 15322376 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | CDS | 15321759 | 15321780 | 15321759 | ID=Msa0979010-mRNA-1:cds;Parent=Msa0979010-mRNA-1 |
| chr6_4 | three_prime_UTR | 15321738 | 15321758 | 15321738 | ID=Msa0979010-mRNA-1:three_prime_utr;Parent=Msa0979010-mRNA-1 |
| chr6_4 | three_prime_UTR | 15321100 | 15321360 | 15321100 | ID=Msa0979010-mRNA-1:three_prime_utr;Parent=Msa0979010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
