AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0882270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0882270 MtrunA17_Chr6g0461871 98.471 785 11 1 1 784 1 785 0.0 1586
Msa0882270 MtrunA17_Chr6g0451081 56.818 792 318 11 1 784 1 776 0.0 901
Msa0882270 MtrunA17_Chr8g0387661 57.347 769 316 6 25 784 27 792 0.0 886
Msa0882270 MtrunA17_Chr3g0128831 54.286 805 322 12 12 784 4 794 0.0 849
Msa0882270 MtrunA17_Chr5g0430731 53.411 777 326 6 9 784 13 754 0.0 847
Msa0882270 MtrunA17_Chr2g0297291 50.458 765 349 6 25 784 50 789 0.0 735
Msa0882270 MtrunA17_Chr4g0052401 49.084 764 359 4 25 784 50 787 0.0 715
Msa0882270 MtrunA17_Chr8g0393241 45.501 789 391 11 22 781 18 796 0.0 682
Msa0882270 MtrunA17_Chr8g0365001 46.094 768 399 5 19 784 86 840 0.0 682
Msa0882270 MtrunA17_Chr4g0055471 43.038 790 426 7 1 784 44 815 0.0 664
Msa0882270 MtrunA17_Chr7g0268981 42.632 760 379 6 25 782 67 771 0.0 635
Msa0882270 MtrunA17_Chr2g0279131 42.765 774 416 7 19 784 95 849 0.0 622
Msa0882270 MtrunA17_Chr5g0429991 41.720 779 409 7 23 784 99 849 0.0 593
Msa0882270 MtrunA17_Chr8g0380281 39.218 793 435 7 7 784 22 782 0.0 578
Msa0882270 MtrunA17_Chr5g0430571 46.599 588 243 7 197 784 19 535 1.00e-178 523
Msa0882270 MtrunA17_Chr8g0375411 42.613 643 345 7 24 656 28 656 1.29e-175 521
Msa0882270 MtrunA17_Chr5g0413721 58.275 429 166 5 7 425 5 430 1.37e-160 488
Msa0882270 MtrunA17_Chr5g0413721 49.589 365 173 4 422 784 516 871 1.32e-113 365
Msa0882270 MtrunA17_Chr8g0344561 40.954 608 311 8 177 784 13 572 2.20e-154 462
Msa0882270 MtrunA17_Chr2g0297311 54.987 391 173 1 33 423 58 445 4.66e-141 423
Msa0882270 MtrunA17_Chr8g0365031 43.619 431 237 2 197 623 40 468 1.10e-128 395
Msa0882270 MtrunA17_Chr8g0344591 42.058 447 236 3 177 623 13 436 7.27e-120 369
Msa0882270 MtrunA17_Chr2g0297321 43.052 367 182 6 423 784 3 347 1.28e-96 304
Msa0882270 MtrunA17_Chr5g0413751 57.386 176 75 0 423 598 133 308 1.17e-70 234
Msa0882270 MtrunA17_Chr5g0413751 57.609 92 34 1 87 173 47 138 6.10e-21 94.4
Msa0882270 MtrunA17_Chr5g0430551 66.013 153 52 0 25 177 11 163 2.12e-62 207
Msa0882270 MtrunA17_Chr8g0365041 49.505 202 83 5 1 192 42 234 1.50e-51 180
Msa0882270 MtrunA17_Chr8g0344581 55.844 154 60 4 25 177 4 150 1.88e-44 157
Msa0882270 MtrunA17_Chr8g0344551 55.195 154 61 4 25 177 4 150 2.97e-44 156
Msa0882270 MtrunA17_Chr1g0159401 40.517 116 62 2 175 290 12 120 1.77e-15 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0882270 AT3G02050.1 76.172 789 183 4 1 784 1 789 0.0 1204
Msa0882270 AT4G23640.1 57.532 770 311 8 25 784 12 775 0.0 895
Msa0882270 AT1G70300.1 55.359 793 334 10 1 784 1 782 0.0 867
Msa0882270 AT2G40540.1 54.000 800 327 7 10 784 11 794 0.0 855
Msa0882270 AT2G40540.5 54.000 800 327 7 10 784 11 794 0.0 855
Msa0882270 AT2G40540.4 54.000 800 327 7 10 784 11 794 0.0 855
Msa0882270 AT2G40540.2 54.000 800 327 7 10 784 11 794 0.0 855
Msa0882270 AT2G40540.3 54.000 800 327 7 10 784 11 794 0.0 855
Msa0882270 AT5G14880.1 56.203 790 317 12 9 784 7 781 0.0 849
Msa0882270 AT2G30070.1 58.132 621 260 0 2 622 3 623 0.0 781
Msa0882270 AT2G30070.1 61.111 72 28 0 713 784 641 712 1.22e-22 103
Msa0882270 AT2G35060.4 48.276 754 361 6 33 784 66 792 0.0 706
Msa0882270 AT2G35060.1 48.276 754 361 6 33 784 66 792 0.0 706
Msa0882270 AT2G35060.3 48.276 754 361 6 33 784 66 792 0.0 706
Msa0882270 AT2G35060.2 48.212 755 361 7 33 784 66 793 0.0 702
Msa0882270 AT1G60160.1 45.038 786 407 7 1 784 65 827 0.0 702
Msa0882270 AT1G31120.1 48.404 752 368 4 33 784 65 796 0.0 697
Msa0882270 AT4G19960.2 47.694 759 381 6 29 784 62 807 0.0 674
Msa0882270 AT4G19960.1 46.710 775 381 7 29 784 62 823 0.0 665
Msa0882270 AT4G19960.3 46.115 785 381 7 29 784 62 833 0.0 661
Msa0882270 AT4G13420.1 42.746 772 407 9 12 782 46 783 0.0 637
Msa0882270 AT2G30070.2 56.773 502 217 0 121 622 2 503 0.0 625
Msa0882270 AT2G30070.2 61.111 72 28 0 713 784 521 592 9.10e-23 103
Msa0882270 AT4G33530.1 40.736 788 423 8 14 784 95 855 0.0 607
Msa0882270 AT5G09400.1 41.244 788 413 7 19 784 99 858 0.0 592
Msa0882270 AT4G19960.4 46.870 591 301 5 197 784 6 586 2.18e-177 522
Msa0882270 AT4G33530.2 40.063 639 342 6 162 784 14 627 7.30e-169 501

Find 193 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGTAACCATTGGATTTC+AGG 0.110674 6_1:+31294725 Msa0882270:CDS
TTTCAGGACATAACCTTAAT+TGG 0.151323 6_1:+31294741 Msa0882270:CDS
CTCTTTATTCGCTGCTTTGC+AGG 0.205975 6_1:+31292773 Msa0882270:CDS
ACCATAAGCATTTCCAATTA+AGG 0.215797 6_1:-31294754 None:intergenic
GTACTTTCTCCAGCTATTTC+AGG 0.226069 6_1:+31292985 Msa0882270:CDS
GTGTTGCAGGACCTGTATTT+TGG 0.244964 6_1:+31294511 Msa0882270:intron
ATTGGGAAGCAAGTTAAATT+TGG 0.262524 6_1:-31292800 None:intergenic
CACACCTCGAAACACATATT+TGG 0.267140 6_1:+31294654 Msa0882270:CDS
ACGGGTACAAGGACATTAAA+AGG 0.272084 6_1:+31296002 Msa0882270:CDS
ATTGAAATGGTTACTAGGTT+TGG 0.295346 6_1:+31295745 Msa0882270:CDS
CTAGGAAAATCTAACCTAAA+TGG 0.297810 6_1:-31296579 None:intergenic
ACCTTAATTGGAAATGCTTA+TGG 0.301902 6_1:+31294753 Msa0882270:CDS
TCATTCAAGTATGGTGAAAA+AGG 0.303717 6_1:-31296703 None:intergenic
TCTGAAGCTTCTTCATTTGA+TGG 0.310126 6_1:+31296109 Msa0882270:CDS
CAAAGCTTCGGTGTTGTATA+TGG 0.317218 6_1:+31292462 Msa0882270:CDS
TGGAGTTGATTCGAAGCTTC+TGG 0.317444 6_1:-31296152 None:intergenic
ACAGTTCTGGCATCGGTATC+AGG 0.318446 6_1:+31293587 Msa0882270:intron
AGGATGTAAAATTTACAAAA+TGG 0.320235 6_1:-31296683 None:intergenic
GAAGATGAAGCTATGGATTC+TGG 0.325547 6_1:-31291099 None:intergenic
GGCTGGAGTTGCGTATATAA+TGG 0.328115 6_1:+31296381 Msa0882270:CDS
TTGAAATGGTTACTAGGTTT+GGG 0.329362 6_1:+31295746 Msa0882270:CDS
GATGGAAGGATGGCTGTTAT+AGG 0.329614 6_1:+31296127 Msa0882270:CDS
ATAAGTATCCAGTTAATTTC+TGG 0.335195 6_1:-31294690 None:intergenic
TGATATATGATACAATATTA+TGG 0.335543 6_1:+31296772 Msa0882270:three_prime_UTR
TATACATCCCAGAAATTAAC+TGG 0.342006 6_1:+31294682 Msa0882270:CDS
ACAACAAAGTTTCATTGAAA+TGG 0.345551 6_1:+31295732 Msa0882270:CDS
ATCAACTCCAAGCTTGATTT+CGG 0.358230 6_1:+31296165 Msa0882270:CDS
AGAAATTAACTGGATACTTA+TGG 0.362899 6_1:+31294692 Msa0882270:CDS
GCTACCTTGGCCGCTATTGT+TGG 0.373549 6_1:+31294549 Msa0882270:CDS
CTCATCGGCAGCTTGTTGAT+TGG 0.374737 6_1:-31292818 None:intergenic
CGTTTCTGCGAAAGAATTGC+AGG 0.376232 6_1:+31296473 Msa0882270:CDS
CTCGACGCCTTCTTACTTGC+GGG 0.386663 6_1:-31296279 None:intergenic
TCATCTCATACAAAGTATAA+TGG 0.387176 6_1:+31296045 Msa0882270:CDS
CATGATGAAGAAACTATCTT+TGG 0.391665 6_1:+31292549 Msa0882270:CDS
GAAGCCATGTTTGCAGATCT+TGG 0.393510 6_1:+31294176 Msa0882270:CDS
TCATCGGCAGCTTGTTGATT+GGG 0.394227 6_1:-31292817 None:intergenic
CTTCTTGTTGTCGTACTGTT+TGG 0.394514 6_1:+31292937 Msa0882270:CDS
ACGGAAACAAAATTCAATAA+TGG 0.397484 6_1:+31293620 Msa0882270:CDS
TTGCACCAATTGTAATCATC+TGG 0.398378 6_1:+31293814 Msa0882270:CDS
AAAAGGAATATTGTAGCAAT+CGG 0.405929 6_1:-31295557 None:intergenic
TTGACTCTTGCTGTAACCAT+TGG 0.407207 6_1:+31294717 Msa0882270:CDS
TGATCCAATCCAGGGTTGTT+AGG 0.412649 6_1:-31296316 None:intergenic
TAAGTATCCAGTTAATTTCT+GGG 0.413836 6_1:-31294689 None:intergenic
CTACCTTGGCCGCTATTGTT+GGG 0.413857 6_1:+31294550 Msa0882270:CDS
CAATGACCATCATTCAAGTA+TGG 0.415193 6_1:-31296712 None:intergenic
GGTCTTTGTTTGCGTAAAAT+CGG 0.416825 6_1:+31295889 Msa0882270:CDS
TTTGGTGCTTGCATGGTCAT+AGG 0.421597 6_1:+31292955 Msa0882270:CDS
CACATCAGTCTTATCGAAGT+TGG 0.424667 6_1:+31296523 Msa0882270:CDS
CTGTTAGCATATCAAAGCTT+CGG 0.428880 6_1:+31292450 Msa0882270:CDS
AAGTTGATTGCAAGCGGCGC+AGG 0.430238 6_1:-31296243 None:intergenic
CTAGGAATTGTCCGTGTCCC+AGG 0.433982 6_1:+31295776 Msa0882270:CDS
CCAATCAGAAAACGTTCTTC+AGG 0.435007 6_1:-31295932 None:intergenic
GTTTATAAAAGTACATTTGA+AGG 0.435121 6_1:+31292510 Msa0882270:CDS
CTTCATCAAGACTAGTACTC+AGG 0.438904 6_1:+31293929 Msa0882270:CDS
CGCAATGTTGGAGAGCAAAT+AGG 0.439763 6_1:-31293767 None:intergenic
ATCTACTCGGAACTTGCAAC+TGG 0.441741 6_1:+31295809 Msa0882270:CDS
AAGTAAGAAGGCGTCGAGTA+AGG 0.442966 6_1:+31296284 Msa0882270:CDS
CAACTCCAGCCTCCTTGGCT+TGG 0.448016 6_1:-31296369 None:intergenic
GTTTCATTGAAATGGTTACT+AGG 0.450379 6_1:+31295740 Msa0882270:CDS
CCTGCTAGCATGTCTCATAC+TGG 0.452739 6_1:+31293740 Msa0882270:CDS
TGCTCGGCCGAAATCAAGCT+TGG 0.452895 6_1:-31296172 None:intergenic
ATTGTCCGTGTCCCAGGGAT+TGG 0.453671 6_1:+31295782 Msa0882270:CDS
GCGGTTCCACTGCCTCCATC+TGG 0.454956 6_1:-31296075 None:intergenic
GTTATGTATGTGTGGCATTA+CGG 0.456184 6_1:+31295680 Msa0882270:CDS
CGACAATCCAAAAGAACAAA+AGG 0.456707 6_1:-31295574 None:intergenic
GCTGGAGTTGCGTATATAAT+GGG 0.459552 6_1:+31296382 Msa0882270:CDS
ATGGTTCTCTGCAGTTGTCA+TGG 0.466926 6_1:+31292406 Msa0882270:intron
CAAAGATAGTTTCTTCATCA+TGG 0.471376 6_1:-31292548 None:intergenic
GGGTTATAGATCTGCTACTA+GGG 0.472351 6_1:-31296222 None:intergenic
CACTAGTCATAATCTTTGTC+TGG 0.474410 6_1:+31295522 Msa0882270:CDS
GAGGCTCCAGTCTGCGATGA+AGG 0.475101 6_1:-31292865 None:intergenic
ATGAAAACCCGCAAGTAAGA+AGG 0.476574 6_1:+31296272 Msa0882270:CDS
ATCTTCTCGAAATCCTTCTC+AGG 0.477411 6_1:+31291116 Msa0882270:CDS
CTAGGTTTGGGCCCTAGTCT+AGG 0.478706 6_1:+31295758 Msa0882270:CDS
ATACGCAACTCCAGCCTCCT+TGG 0.478895 6_1:-31296374 None:intergenic
CTCTGTGTGTTCCGCAATGT+TGG 0.480499 6_1:-31293779 None:intergenic
TTAACAGCATGATCCAATCC+AGG 0.482648 6_1:-31296325 None:intergenic
TCCTGCATTTCACAAGGTGT+TGG 0.483278 6_1:+31295868 Msa0882270:CDS
TTAATCCAAGCCAAGGAGGC+TGG 0.483772 6_1:+31296364 Msa0882270:CDS
AAGATCTGCAAACATGGCTT+CGG 0.484207 6_1:-31294174 None:intergenic
ATGCACCTATACATTCGATA+TGG 0.486036 6_1:-31295971 None:intergenic
CACGACCATATCGAATGTAT+AGG 0.487235 6_1:+31295966 Msa0882270:CDS
TATAGGTGCATTGTTAGATA+CGG 0.488450 6_1:+31295983 Msa0882270:CDS
TAAAAGTGCACCAGGGAGGA+TGG 0.489671 6_1:+31295624 Msa0882270:CDS
CGTTCTTCAGGTGAGACATA+TGG 0.492867 6_1:-31295920 None:intergenic
TTCTTCATTTGATGGAAGGA+TGG 0.493112 6_1:+31296117 Msa0882270:CDS
AGAAGCCAGATGATTACAAT+TGG 0.494086 6_1:-31293819 None:intergenic
ACTGCCTAACAACCCTGGAT+TGG 0.494344 6_1:+31296312 Msa0882270:CDS
AGGGTTATAGATCTGCTACT+AGG 0.501190 6_1:-31296223 None:intergenic
CTATTGAGCGCCGATGATAA+CGG 0.504444 6_1:+31292633 Msa0882270:CDS
AAGCTTCTTCATTTGATGGA+AGG 0.505745 6_1:+31296113 Msa0882270:CDS
AAGGACATTAAAAGGGATGA+TGG 0.507864 6_1:+31296010 Msa0882270:CDS
GTGTTTGGTAATGCAATACA+TGG 0.510091 6_1:+31294328 Msa0882270:CDS
GGTATCAGGATTAAAAGTTA+CGG 0.511408 6_1:+31293601 Msa0882270:CDS
CTGTCCAAATATGTGTTTCG+AGG 0.511421 6_1:-31294658 None:intergenic
GATATATTATGTCTAGATTG+TGG 0.513129 6_1:+31296549 Msa0882270:exon
TACGGTCCTTCATCGCAGAC+TGG 0.516475 6_1:+31292859 Msa0882270:CDS
ATCAAGCAGTGTCATGCACT+TGG 0.517666 6_1:+31294606 Msa0882270:CDS
ATTTCGAGAAGATGAAGCTA+TGG 0.518729 6_1:-31291106 None:intergenic
ACCAACACCTTGTGAAATGC+AGG 0.521396 6_1:-31295869 None:intergenic
CGTACTGTTTGGTGCTTGCA+TGG 0.524544 6_1:+31292948 Msa0882270:CDS
TGTCATGGATTAACTTGTCT+AGG 0.526123 6_1:+31292421 Msa0882270:CDS
GGCGTTCCTAAAAGTGCACC+AGG 0.530505 6_1:+31295616 Msa0882270:CDS
AAAGGAATATTGTAGCAATC+GGG 0.530724 6_1:-31295556 None:intergenic
CGGGTACAAGGACATTAAAA+GGG 0.532081 6_1:+31296003 Msa0882270:CDS
GATATCAACATCTTCTTGCT+CGG 0.532591 6_1:-31296188 None:intergenic
TTTAGATTTAATCCAAGCCA+AGG 0.535244 6_1:+31296357 Msa0882270:CDS
CATTGTTAGATACGGGTACA+AGG 0.540496 6_1:+31295991 Msa0882270:CDS
ACTCAGGGTTGGATTTCTCT+CGG 0.541690 6_1:+31293945 Msa0882270:CDS
GAGCTGTCGTCGTACAAATA+CGG 0.542689 6_1:+31292841 Msa0882270:CDS
GTTTATCCAGATGGAGGCAG+TGG 0.542753 6_1:+31296069 Msa0882270:CDS
CTAGCATGTCTCATACTGGT+TGG 0.543181 6_1:+31293744 Msa0882270:CDS
ACTCCCAACAATAGCGGCCA+AGG 0.543271 6_1:-31294553 None:intergenic
TTACCCTACAGTTCTGGCAT+CGG 0.546800 6_1:+31293580 Msa0882270:intron
ACTACCTTACCTGAAATAGC+TGG 0.548887 6_1:-31292994 None:intergenic
TGCATGACACTGCTTGATGA+TGG 0.549256 6_1:-31294601 None:intergenic
ACACGGACAATTCCTAGACT+AGG 0.553888 6_1:-31295770 None:intergenic
TCAAGACTAGTACTCAGGGT+TGG 0.554454 6_1:+31293934 Msa0882270:CDS
TCTTGATTGTTATGTATGTG+TGG 0.554494 6_1:+31295672 Msa0882270:CDS
GTTCATAACCACATTTCTGA+TGG 0.556704 6_1:+31295499 Msa0882270:CDS
CATAACAATCAAGAAGAAGA+AGG 0.558991 6_1:-31295663 None:intergenic
ATGACCAAGATCTGCAAACA+TGG 0.559044 6_1:-31294180 None:intergenic
CAAGAGGAACCCATCCTCCC+TGG 0.559228 6_1:-31295634 None:intergenic
TATAATGGAGTTTATCCAGA+TGG 0.560256 6_1:+31296060 Msa0882270:CDS
GGAATGTTGAGAGCCACAGC+TGG 0.564106 6_1:-31296499 None:intergenic
AAAAGTGCACCAGGGAGGAT+GGG 0.564191 6_1:+31295625 Msa0882270:CDS
CGTCAAAAGTTGATTGCAAG+CGG 0.565019 6_1:-31296249 None:intergenic
AATACCTTCACCGTTATCAT+CGG 0.565220 6_1:-31292643 None:intergenic
AGGAAGGTTTGTTACGAAGT+GGG 0.566294 6_1:-31295849 None:intergenic
ACTCGACGCCTTCTTACTTG+CGG 0.568178 6_1:-31296280 None:intergenic
CAGGAAGGTTTGTTACGAAG+TGG 0.569332 6_1:-31295850 None:intergenic
TTTCAACTGCCTAACAACCC+TGG 0.571708 6_1:+31296307 Msa0882270:CDS
CCAGTATGAGACATGCTAGC+AGG 0.572488 6_1:-31293740 None:intergenic
GGATCTATAATACGATACAC+TGG 0.573433 6_1:+31293859 Msa0882270:CDS
AGAACTTGATGATATAATGT+GGG 0.574528 6_1:-31293908 None:intergenic
CAATGATAAAATCAAGAATG+AGG 0.575181 6_1:-31296643 None:intergenic
AGGGTTGGATTTCTCTCGGA+GGG 0.577288 6_1:+31293949 Msa0882270:CDS
GGTTATGTCCTGAAATCCAA+TGG 0.581083 6_1:-31294733 None:intergenic
GTACGACGACAGCTCCTCAT+CGG 0.584229 6_1:-31292833 None:intergenic
AAGAAGAAGGACAAGACAAG+AGG 0.585159 6_1:-31295650 None:intergenic
TCAGGTGAGACATATGGTAC+AGG 0.585971 6_1:-31295914 None:intergenic
TTCATCAAGACTAGTACTCA+GGG 0.586587 6_1:+31293930 Msa0882270:CDS
CACGGACAATTCCTAGACTA+GGG 0.586686 6_1:-31295769 None:intergenic
GGTGTGTACGACTTTGACGC+GGG 0.588179 6_1:-31294637 None:intergenic
GGGATACTTCTCTGCATCAC+CGG 0.588408 6_1:+31293969 Msa0882270:CDS
GCTTGCATGGTCATAGGTGA+TGG 0.589102 6_1:+31292961 Msa0882270:CDS
ATAGGTGCATTGTTAGATAC+GGG 0.589766 6_1:+31295984 Msa0882270:CDS
TAGGAATTGTCCGTGTCCCA+GGG 0.591674 6_1:+31295777 Msa0882270:CDS
AAGAACTTGATGATATAATG+TGG 0.595238 6_1:-31293909 None:intergenic
CGGGTATATAACAAAAGCAA+AGG 0.595997 6_1:-31294306 None:intergenic
AGTTGATTGCAAGCGGCGCA+GGG 0.596111 6_1:-31296242 None:intergenic
GATATGGTCGTGGACAAGCT+CGG 0.598042 6_1:-31295955 None:intergenic
CAATCAACAAGCTGCCGATG+AGG 0.599619 6_1:+31292819 Msa0882270:CDS
AGGGTCGGTTGTACCTGAGA+AGG 0.600575 6_1:-31291129 None:intergenic
AGTAGATGAGTCCAATCCCT+GGG 0.601618 6_1:-31295793 None:intergenic
ATGTATTGCATTACCAAACA+CGG 0.601781 6_1:-31294326 None:intergenic
GACACTCGTATGTGAAGGCA+AGG 0.602824 6_1:+31296404 Msa0882270:CDS
AAACGTCTTCAGCGGAGACG+AGG 0.602875 6_1:-31292884 None:intergenic
GAGTAGATGAGTCCAATCCC+TGG 0.603429 6_1:-31295794 None:intergenic
ATGAATACATATTTAAGCAA+CGG 0.604438 6_1:-31292609 None:intergenic
GTTTCTGCGAAAGAATTGCA+GGG 0.607197 6_1:+31296474 Msa0882270:CDS
AACTATTATGAACAGAGTCG+AGG 0.607255 6_1:-31294376 None:intergenic
ACGAAGTGGGTGAATATCGA+TGG 0.607427 6_1:-31295836 None:intergenic
CTATACATTCGATATGGTCG+TGG 0.608299 6_1:-31295965 None:intergenic
GCTTCAGAACTCGAGAATTG+CGG 0.608404 6_1:-31296094 None:intergenic
TAACAGCATGATCCAATCCA+GGG 0.608772 6_1:-31296324 None:intergenic
TGTGGCATTACGGTATTCGT+AGG 0.609257 6_1:+31295690 Msa0882270:CDS
GAATTGCAGGGGTCCAGCTG+TGG 0.613283 6_1:+31296486 Msa0882270:CDS
GACTAGTGCCATCAGAAATG+TGG 0.617430 6_1:-31295507 None:intergenic
AATGTCGATTTGTAACTACT+AGG 0.618260 6_1:-31296597 None:intergenic
TGCAGGACTTGCTTGTATGA+CGG 0.622018 6_1:+31295472 Msa0882270:intron
AGCGCCGATGATAACGGTGA+AGG 0.624946 6_1:+31292639 Msa0882270:CDS
AATGGGACACTCGTATGTGA+AGG 0.630197 6_1:+31296399 Msa0882270:CDS
TGAGTCCAATCCCTGGGACA+CGG 0.634316 6_1:-31295787 None:intergenic
AGATAGTTTCTTCATCATGG+TGG 0.637899 6_1:-31292545 None:intergenic
AGGTGTGTACGACTTTGACG+CGG 0.639117 6_1:-31294638 None:intergenic
AAACCTTCCTGCATTTCACA+AGG 0.643965 6_1:+31295862 Msa0882270:CDS
AATGGAGTTTATCCAGATGG+AGG 0.651775 6_1:+31296063 Msa0882270:CDS
AGCTTGACTCCCAACAATAG+CGG 0.652223 6_1:-31294559 None:intergenic
TGTATTGCATTACCAAACAC+GGG 0.653373 6_1:-31294325 None:intergenic
CGAAGGCGTGTATCTATCAG+CGG 0.653373 6_1:+31295595 Msa0882270:CDS
AGGGATTGGACTCATCTACT+CGG 0.657568 6_1:+31295796 Msa0882270:CDS
CTATTTGCTCTCCAACATTG+CGG 0.663991 6_1:+31293768 Msa0882270:CDS
TTTCTGCGAAAGAATTGCAG+GGG 0.665372 6_1:+31296475 Msa0882270:CDS
ACACCTTGTGAAATGCAGGA+AGG 0.668467 6_1:-31295865 None:intergenic
CAGGGTTGGATTTCTCTCGG+AGG 0.669872 6_1:+31293948 Msa0882270:CDS
TTCCTAAAAGTGCACCAGGG+AGG 0.703180 6_1:+31295620 Msa0882270:CDS
TGTTTGGTAATGCAATACAT+GGG 0.708247 6_1:+31294329 Msa0882270:CDS
GAACTTGATGATATAATGTG+GGG 0.708764 6_1:-31293907 None:intergenic
AGATTTAATCCAAGCCAAGG+AGG 0.711722 6_1:+31296360 Msa0882270:CDS
ACTTCGATAAGACTGATGTG+AGG 0.732857 6_1:-31296520 None:intergenic
GTGTGTACGACTTTGACGCG+GGG 0.733832 6_1:-31294636 None:intergenic
GCGTTCCTAAAAGTGCACCA+GGG 0.755406 6_1:+31295617 Msa0882270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATGAATTATATGATT+TGG + chr6_1:31294921-31294940 Msa0882270:intron 10.0%
!!! AACTATAATTTAAGTTTTTT+CGG - chr6_1:31295243-31295262 None:intergenic 10.0%
!! ATTTAACGAATAATAATACT+TGG - chr6_1:31292363-31292382 None:intergenic 15.0%
!!! AAATGTATCGATTTTTTTTA+TGG + chr6_1:31292387-31292406 Msa0882270:intron 15.0%
!! ACTTGAAACATAAATTTAAA+AGG - chr6_1:31292693-31292712 None:intergenic 15.0%
!!! TTTTAAATTTATGTTTCAAG+TGG + chr6_1:31292692-31292711 Msa0882270:intron 15.0%
!!! GCTTAAATTTAAAGTTATAA+GGG - chr6_1:31294069-31294088 None:intergenic 15.0%
!!! AAAACAAATTGATTTCATTA+AGG - chr6_1:31294469-31294488 None:intergenic 15.0%
!! AATTGCATATAAATAAGTTT+GGG - chr6_1:31294897-31294916 None:intergenic 15.0%
!! TAATTGCATATAAATAAGTT+TGG - chr6_1:31294898-31294917 None:intergenic 15.0%
!! TGATATATGATACAATATTA+TGG + chr6_1:31296772-31296791 Msa0882270:three_prime_UTR 15.0%
!! AAAAAAACTAAACTCACATA+TGG + chr6_1:31291074-31291093 Msa0882270:exon 20.0%
!!! TTTTGATTCAAATCTTCTAT+TGG + chr6_1:31291313-31291332 Msa0882270:intron 20.0%
!!! TTCTTTAGTGTATTTTTGAT+GGG + chr6_1:31291601-31291620 Msa0882270:intron 20.0%
!!! TTTTAAAAACTAAAATACCG+AGG - chr6_1:31291763-31291782 None:intergenic 20.0%
!! AATAAAATAAACATCTGCAA+TGG + chr6_1:31292113-31292132 Msa0882270:intron 20.0%
!!! CTACTTTGAATAATTTTCTA+TGG + chr6_1:31292315-31292334 Msa0882270:intron 20.0%
!!! GTTTATAAAAGTACATTTGA+AGG + chr6_1:31292510-31292529 Msa0882270:CDS 20.0%
!! ATGAATACATATTTAAGCAA+CGG - chr6_1:31292612-31292631 None:intergenic 20.0%
!! TCTTATCATATAAGTTCTTA+TGG + chr6_1:31293092-31293111 Msa0882270:intron 20.0%
!!! TTCTATCGATTTTTATTCTT+GGG + chr6_1:31293838-31293857 Msa0882270:CDS 20.0%
!!! CGCTTAAATTTAAAGTTATA+AGG - chr6_1:31294070-31294089 None:intergenic 20.0%
!! CAAAACAATATGATAAACAT+TGG - chr6_1:31295302-31295321 None:intergenic 20.0%
!! AGGATGTAAAATTTACAAAA+TGG - chr6_1:31296686-31296705 None:intergenic 20.0%
!! TTTGAGATTGAGATAAGAAA+GGG - chr6_1:31291151-31291170 None:intergenic 25.0%
!!! ATTTCATACTTTGAGATTTG+AGG + chr6_1:31291375-31291394 Msa0882270:intron 25.0%
!!! TTTCATACTTTGAGATTTGA+GGG + chr6_1:31291376-31291395 Msa0882270:intron 25.0%
! ATGTGTGTATACTGAATTAT+TGG - chr6_1:31291405-31291424 None:intergenic 25.0%
! TATCTGTAGCAGTAAAATTT+AGG + chr6_1:31291424-31291443 Msa0882270:intron 25.0%
! TGATAATTGATACAAGAAAG+TGG + chr6_1:31291488-31291507 Msa0882270:intron 25.0%
!!! CTTCTTTAGTGTATTTTTGA+TGG + chr6_1:31291600-31291619 Msa0882270:intron 25.0%
!! ATTTTTCGTAACCATGTTAT+TGG - chr6_1:31292246-31292265 None:intergenic 25.0%
!! GTACTTTTATAAACATAGAG+CGG - chr6_1:31292504-31292523 None:intergenic 25.0%
! GAAAATAACTTACAGCTTAA+TGG - chr6_1:31293156-31293175 None:intergenic 25.0%
!!! GTTATTTTCATAAGCTATCT+TGG + chr6_1:31293167-31293186 Msa0882270:intron 25.0%
!! AAACTTTTCATAAGCTATCT+TGG + chr6_1:31293215-31293234 Msa0882270:intron 25.0%
! TAAGCTGAAAATAAACTTAC+AGG + chr6_1:31293251-31293270 Msa0882270:intron 25.0%
! ATCTACTAAAAACTGTTGTA+TGG - chr6_1:31293491-31293510 None:intergenic 25.0%
! TGAGAATTTGAACAAGTTAA+AGG - chr6_1:31293531-31293550 None:intergenic 25.0%
! ACGGAAACAAAATTCAATAA+TGG + chr6_1:31293620-31293639 Msa0882270:CDS 25.0%
! TATCTCTAGCAAATGAAAAT+TGG - chr6_1:31293650-31293669 None:intergenic 25.0%
! GAAACAACGTGAAATTTATT+AGG - chr6_1:31293707-31293726 None:intergenic 25.0%
!!! CTTCTATCGATTTTTATTCT+TGG + chr6_1:31293837-31293856 Msa0882270:CDS 25.0%
!! AGAACTTGATGATATAATGT+GGG - chr6_1:31293911-31293930 None:intergenic 25.0%
!! AAGAACTTGATGATATAATG+TGG - chr6_1:31293912-31293931 None:intergenic 25.0%
!!! AGGGTAAATTATTTCTGAAA+AGG - chr6_1:31294050-31294069 None:intergenic 25.0%
!! AAATGAGTTACTAAGTTGAA+TGG + chr6_1:31294123-31294142 Msa0882270:intron 25.0%
! TAAGTATCCAGTTAATTTCT+GGG - chr6_1:31294692-31294711 None:intergenic 25.0%
! ATAAGTATCCAGTTAATTTC+TGG - chr6_1:31294693-31294712 None:intergenic 25.0%
! AGAAATTAACTGGATACTTA+TGG + chr6_1:31294692-31294711 Msa0882270:CDS 25.0%
!!! TTTAAGTTTTTTCGGTAAGA+GGG - chr6_1:31295235-31295254 None:intergenic 25.0%
!!! ATTTAAGTTTTTTCGGTAAG+AGG - chr6_1:31295236-31295255 None:intergenic 25.0%
! TTTCAATTGAAAACATGCAT+AGG - chr6_1:31295424-31295443 None:intergenic 25.0%
! AATACTCGGAAAACTTATTA+CGG - chr6_1:31295448-31295467 None:intergenic 25.0%
!! TAATAAGTTTTCCGAGTATT+TGG + chr6_1:31295448-31295467 Msa0882270:intron 25.0%
! AAAAGGAATATTGTAGCAAT+CGG - chr6_1:31295560-31295579 None:intergenic 25.0%
!! CAATATTCCTTTTGTTCTTT+TGG + chr6_1:31295567-31295586 Msa0882270:CDS 25.0%
! ACAACAAAGTTTCATTGAAA+TGG + chr6_1:31295732-31295751 Msa0882270:CDS 25.0%
! TCATCTCATACAAAGTATAA+TGG + chr6_1:31296045-31296064 Msa0882270:CDS 25.0%
! GATATATTATGTCTAGATTG+TGG + chr6_1:31296549-31296568 Msa0882270:exon 25.0%
!! ATTGTGGAATTTTACCATTT+AGG + chr6_1:31296565-31296584 Msa0882270:three_prime_UTR 25.0%
!!! TTAGAAACAAGTTTTCAAGA+TGG + chr6_1:31296618-31296637 Msa0882270:three_prime_UTR 25.0%
! CAATGATAAAATCAAGAATG+AGG - chr6_1:31296646-31296665 None:intergenic 25.0%
! GTTTGAGATTGAGATAAGAA+AGG - chr6_1:31291152-31291171 None:intergenic 30.0%
!! TTCATACTTTGAGATTTGAG+GGG + chr6_1:31291377-31291396 Msa0882270:intron 30.0%
! AAAGTACCTAGCTTGAAATA+TGG - chr6_1:31292083-31292102 None:intergenic 30.0%
TAAACATCTGCAATGGAATA+TGG + chr6_1:31292120-31292139 Msa0882270:intron 30.0%
AATACTTCACACCAATAACA+TGG + chr6_1:31292232-31292251 Msa0882270:intron 30.0%
CAAAGATAGTTTCTTCATCA+TGG - chr6_1:31292551-31292570 None:intergenic 30.0%
CATGATGAAGAAACTATCTT+TGG + chr6_1:31292549-31292568 Msa0882270:CDS 30.0%
!!! GTGTTTTTTCGTTGATTTTC+TGG + chr6_1:31292571-31292590 Msa0882270:CDS 30.0%
ATCATGATGCAATTATTGTC+AGG + chr6_1:31292739-31292758 Msa0882270:intron 30.0%
ATTGGGAAGCAAGTTAAATT+TGG - chr6_1:31292803-31292822 None:intergenic 30.0%
AATAAGAAAATCCAGAGAGT+CGG + chr6_1:31293022-31293041 Msa0882270:intron 30.0%
GAACTTAATTAAGCACTTCT+GGG - chr6_1:31293060-31293079 None:intergenic 30.0%
AGAACTTAATTAAGCACTTC+TGG - chr6_1:31293061-31293080 None:intergenic 30.0%
AAGCTTATGGAAACATCTAA+TGG - chr6_1:31293281-31293300 None:intergenic 30.0%
AGACAGTTTATGAAAGCTTA+TGG - chr6_1:31293294-31293313 None:intergenic 30.0%
GTTGTATGGAAATTTGAACA+CGG - chr6_1:31293477-31293496 None:intergenic 30.0%
CTTGTTCAAATTCTCAGTTA+CGG + chr6_1:31293535-31293554 Msa0882270:intron 30.0%
GGTATCAGGATTAAAAGTTA+CGG + chr6_1:31293601-31293620 Msa0882270:CDS 30.0%
! ATAAATTTCACGTTGTTTCC+AGG + chr6_1:31293708-31293727 Msa0882270:intron 30.0%
! GAGATAGCAAAGACTATTTT+TGG - chr6_1:31293888-31293907 None:intergenic 30.0%
! GAACTTGATGATATAATGTG+GGG - chr6_1:31293910-31293929 None:intergenic 30.0%
! ATTTTACTGCTTCGTCAATA+AGG + chr6_1:31294201-31294220 Msa0882270:CDS 30.0%
! TTTTACTGCTTCGTCAATAA+GGG + chr6_1:31294202-31294221 Msa0882270:CDS 30.0%
!! TTTTGTTATATACCCGTGTT+TGG + chr6_1:31294313-31294332 Msa0882270:CDS 30.0%
ATGTATTGCATTACCAAACA+CGG - chr6_1:31294329-31294348 None:intergenic 30.0%
!! TGTTTGGTAATGCAATACAT+GGG + chr6_1:31294329-31294348 Msa0882270:CDS 30.0%
! TTTTAGACAAAAAAGCTGCT+TGG - chr6_1:31294355-31294374 None:intergenic 30.0%
AAGGTAGCAATAACAAAAAC+AGG - chr6_1:31294537-31294556 None:intergenic 30.0%
!!! TGTTTTTGTTATTGCTACCT+TGG + chr6_1:31294536-31294555 Msa0882270:CDS 30.0%
TATACATCCCAGAAATTAAC+TGG + chr6_1:31294682-31294701 Msa0882270:CDS 30.0%
TTTCAGGACATAACCTTAAT+TGG + chr6_1:31294741-31294760 Msa0882270:CDS 30.0%
ACCTTAATTGGAAATGCTTA+TGG + chr6_1:31294753-31294772 Msa0882270:CDS 30.0%
ACCATAAGCATTTCCAATTA+AGG - chr6_1:31294757-31294776 None:intergenic 30.0%
CATATAAATAAGTTTGGGCT+AGG - chr6_1:31294892-31294911 None:intergenic 30.0%
! AGTTACACTTTTCAGCTTAT+AGG - chr6_1:31295143-31295162 None:intergenic 30.0%
!!! ATGTAATGCTTGTGCTATTT+TGG + chr6_1:31295271-31295290 Msa0882270:intron 30.0%
! TTCTTTTCATAATCAGTAGC+AGG - chr6_1:31295325-31295344 None:intergenic 30.0%
AAAGGAATATTGTAGCAATC+GGG - chr6_1:31295559-31295578 None:intergenic 30.0%
CATAACAATCAAGAAGAAGA+AGG - chr6_1:31295666-31295685 None:intergenic 30.0%
TCTTGATTGTTATGTATGTG+TGG + chr6_1:31295672-31295691 Msa0882270:CDS 30.0%
GTTTCATTGAAATGGTTACT+AGG + chr6_1:31295740-31295759 Msa0882270:CDS 30.0%
ATTGAAATGGTTACTAGGTT+TGG + chr6_1:31295745-31295764 Msa0882270:CDS 30.0%
TTGAAATGGTTACTAGGTTT+GGG + chr6_1:31295746-31295765 Msa0882270:CDS 30.0%
TATAGGTGCATTGTTAGATA+CGG + chr6_1:31295983-31296002 Msa0882270:CDS 30.0%
! TATAATGGAGTTTATCCAGA+TGG + chr6_1:31296060-31296079 Msa0882270:CDS 30.0%
TTTAGATTTAATCCAAGCCA+AGG + chr6_1:31296357-31296376 Msa0882270:CDS 30.0%
AAAAAGCTTGTGATCGATAT+GGG + chr6_1:31296445-31296464 Msa0882270:CDS 30.0%
CTAGGAAAATCTAACCTAAA+TGG - chr6_1:31296582-31296601 None:intergenic 30.0%
!! AATGTCGATTTGTAACTACT+AGG - chr6_1:31296600-31296619 None:intergenic 30.0%
TCATTCAAGTATGGTGAAAA+AGG - chr6_1:31296706-31296725 None:intergenic 30.0%
! TTTTCACCATACTTGAATGA+TGG + chr6_1:31296706-31296725 Msa0882270:three_prime_UTR 30.0%
ATTTCGAGAAGATGAAGCTA+TGG - chr6_1:31291109-31291128 None:intergenic 35.0%
AGATTGAGATAAGAAAGGGT+CGG - chr6_1:31291147-31291166 None:intergenic 35.0%
TATAATATTCCGCATACACG+CGG + chr6_1:31291688-31291707 Msa0882270:intron 35.0%
ACTGTCAAATCTCAATCCAA+CGG - chr6_1:31291729-31291748 None:intergenic 35.0%
TTCACATAGTCAGATATCAC+TGG - chr6_1:31291834-31291853 None:intergenic 35.0%
TATCTGACTATGTGAATGCA+AGG + chr6_1:31291838-31291857 Msa0882270:intron 35.0%
TTGCGAGAAATCTGAATTTG+AGG + chr6_1:31291869-31291888 Msa0882270:intron 35.0%
TGCGAGAAATCTGAATTTGA+GGG + chr6_1:31291870-31291889 Msa0882270:intron 35.0%
CCCTAATGAAGTTTAGTCAT+CGG - chr6_1:31291967-31291986 None:intergenic 35.0%
CCGATGACTAAACTTCATTA+GGG + chr6_1:31291964-31291983 Msa0882270:intron 35.0%
TCGAATTCAAATTGCGTTAG+TGG - chr6_1:31292169-31292188 None:intergenic 35.0%
ACTAACGCAATTTGAATTCG+AGG + chr6_1:31292168-31292187 Msa0882270:intron 35.0%
CTAACGCAATTTGAATTCGA+GGG + chr6_1:31292169-31292188 Msa0882270:intron 35.0%
TAACGCAATTTGAATTCGAG+GGG + chr6_1:31292170-31292189 Msa0882270:intron 35.0%
AGTTTAGTTATTGGCAAAGC+CGG + chr6_1:31292207-31292226 Msa0882270:intron 35.0%
! TATTGGTGTGAAGTATTCAC+CGG - chr6_1:31292229-31292248 None:intergenic 35.0%
CATTTCAGTGTAGACTTCTT+TGG + chr6_1:31292270-31292289 Msa0882270:intron 35.0%
TAGACTTCTTTGGATTTCCA+CGG + chr6_1:31292280-31292299 Msa0882270:intron 35.0%
!!! TTGGATTTCCACGGTTTTTT+CGG + chr6_1:31292289-31292308 Msa0882270:intron 35.0%
!! TGTCATGGATTAACTTGTCT+AGG + chr6_1:31292421-31292440 Msa0882270:CDS 35.0%
CTGTTAGCATATCAAAGCTT+CGG + chr6_1:31292450-31292469 Msa0882270:CDS 35.0%
AGATAGTTTCTTCATCATGG+TGG - chr6_1:31292548-31292567 None:intergenic 35.0%
AATACCTTCACCGTTATCAT+CGG - chr6_1:31292646-31292665 None:intergenic 35.0%
ATGATGCAATTATTGTCAGG+TGG + chr6_1:31292742-31292761 Msa0882270:intron 35.0%
TCCAAGAATTGCACTTCTAA+GGG - chr6_1:31293367-31293386 None:intergenic 35.0%
TTCCAAGAATTGCACTTCTA+AGG - chr6_1:31293368-31293387 None:intergenic 35.0%
TTGCACCAATTGTAATCATC+TGG + chr6_1:31293814-31293833 Msa0882270:CDS 35.0%
AGAAGCCAGATGATTACAAT+TGG - chr6_1:31293822-31293841 None:intergenic 35.0%
GGATCTATAATACGATACAC+TGG + chr6_1:31293859-31293878 Msa0882270:CDS 35.0%
TTCATCAAGACTAGTACTCA+GGG + chr6_1:31293930-31293949 Msa0882270:CDS 35.0%
CACGTAAGATAACTACTTGT+AGG - chr6_1:31294010-31294029 None:intergenic 35.0%
CTACAAGTAGTTATCTTACG+TGG + chr6_1:31294008-31294027 Msa0882270:intron 35.0%
CGGGTATATAACAAAAGCAA+AGG - chr6_1:31294309-31294328 None:intergenic 35.0%
TGTATTGCATTACCAAACAC+GGG - chr6_1:31294328-31294347 None:intergenic 35.0%
!! GTGTTTGGTAATGCAATACA+TGG + chr6_1:31294328-31294347 Msa0882270:CDS 35.0%
AACTATTATGAACAGAGTCG+AGG - chr6_1:31294379-31294398 None:intergenic 35.0%
! AGTTTTTACGACTCAATACC+TGG + chr6_1:31294395-31294414 Msa0882270:CDS 35.0%
ACAAAAACAGGCCAAAATAC+AGG - chr6_1:31294525-31294544 None:intergenic 35.0%
! AGCGTTGAAACCAAAACTAT+AGG + chr6_1:31294810-31294829 Msa0882270:intron 35.0%
GCGTTGAAACCAAAACTATA+GGG + chr6_1:31294811-31294830 Msa0882270:intron 35.0%
! ATGCAATCTCCCTATAGTTT+TGG - chr6_1:31294823-31294842 None:intergenic 35.0%
TATGCAAAGTTCAACTCGTT+TGG - chr6_1:31294982-31295001 None:intergenic 35.0%
! GAGCTCAAGTTTGACTTATT+TGG + chr6_1:31295028-31295047 Msa0882270:intron 35.0%
!! AAACTGCTTTCAAGTTGGTT+CGG + chr6_1:31295093-31295112 Msa0882270:intron 35.0%
! ACTTTTCAGCTTATAGGTTG+GGG - chr6_1:31295137-31295156 None:intergenic 35.0%
! CACTTTTCAGCTTATAGGTT+GGG - chr6_1:31295138-31295157 None:intergenic 35.0%
! ACACTTTTCAGCTTATAGGT+TGG - chr6_1:31295139-31295158 None:intergenic 35.0%
TGCATAGGCAAAATACAGAT+TGG - chr6_1:31295409-31295428 None:intergenic 35.0%
GTTCATAACCACATTTCTGA+TGG + chr6_1:31295499-31295518 Msa0882270:CDS 35.0%
CACTAGTCATAATCTTTGTC+TGG + chr6_1:31295522-31295541 Msa0882270:CDS 35.0%
CGACAATCCAAAAGAACAAA+AGG - chr6_1:31295577-31295596 None:intergenic 35.0%
! TTGTTCTTTTGGATTGTCGA+AGG + chr6_1:31295578-31295597 Msa0882270:CDS 35.0%
GTTATGTATGTGTGGCATTA+CGG + chr6_1:31295680-31295699 Msa0882270:CDS 35.0%
! GGTCTTTGTTTGCGTAAAAT+CGG + chr6_1:31295889-31295908 Msa0882270:CDS 35.0%
ATGCACCTATACATTCGATA+TGG - chr6_1:31295974-31295993 None:intergenic 35.0%
ATAGGTGCATTGTTAGATAC+GGG + chr6_1:31295984-31296003 Msa0882270:CDS 35.0%
AAGGACATTAAAAGGGATGA+TGG + chr6_1:31296010-31296029 Msa0882270:CDS 35.0%
! TCTGAAGCTTCTTCATTTGA+TGG + chr6_1:31296109-31296128 Msa0882270:CDS 35.0%
AAGCTTCTTCATTTGATGGA+AGG + chr6_1:31296113-31296132 Msa0882270:CDS 35.0%
TTCTTCATTTGATGGAAGGA+TGG + chr6_1:31296117-31296136 Msa0882270:CDS 35.0%
ATCAACTCCAAGCTTGATTT+CGG + chr6_1:31296165-31296184 Msa0882270:CDS 35.0%
GATATCAACATCTTCTTGCT+CGG - chr6_1:31296191-31296210 None:intergenic 35.0%
GAAAAAGCTTGTGATCGATA+TGG + chr6_1:31296444-31296463 Msa0882270:CDS 35.0%
! GATTTTATCATTGCTTCTGC+TGG + chr6_1:31296653-31296672 Msa0882270:three_prime_UTR 35.0%
CAATGACCATCATTCAAGTA+TGG - chr6_1:31296715-31296734 None:intergenic 35.0%
GAAGATGAAGCTATGGATTC+TGG - chr6_1:31291102-31291121 None:intergenic 40.0%
ATCTTCTCGAAATCCTTCTC+AGG + chr6_1:31291116-31291135 Msa0882270:CDS 40.0%
CTTCACTTCAACACTGTCTT+TGG + chr6_1:31291241-31291260 Msa0882270:intron 40.0%
!! TTTGATGGGTTTGAGCTTTG+TGG + chr6_1:31291615-31291634 Msa0882270:intron 40.0%
CTTTGTGGATGGAAAAACTG+TGG + chr6_1:31291630-31291649 Msa0882270:intron 40.0%
TGGATGGAAAAACTGTGGTT+GGG + chr6_1:31291635-31291654 Msa0882270:intron 40.0%
GACAGTCATGATTTCAACCT+CGG + chr6_1:31291743-31291762 Msa0882270:intron 40.0%
ACTGGTCGTTGTATTGAGAT+CGG - chr6_1:31291816-31291835 None:intergenic 40.0%
GCGAGAAATCTGAATTTGAG+GGG + chr6_1:31291871-31291890 Msa0882270:intron 40.0%
CTAATCTCCGATGAGGAATT+TGG - chr6_1:31291919-31291938 None:intergenic 40.0%
ACAATGACTAATCTCCGATG+AGG - chr6_1:31291926-31291945 None:intergenic 40.0%
AGTTTAGTCATCGGCAAAGT+TGG - chr6_1:31291958-31291977 None:intergenic 40.0%
GCCGATGACTAAACTTCATT+AGG + chr6_1:31291963-31291982 Msa0882270:intron 40.0%
TGAAGGCAAACCCAATTCAA+GGG - chr6_1:31291996-31292015 None:intergenic 40.0%
AACGGTCCATATTTCAAGCT+AGG + chr6_1:31292074-31292093 Msa0882270:intron 40.0%
CCAATAACTAAACTCCGTCA+CGG - chr6_1:31292201-31292220 None:intergenic 40.0%
AGTAGAAACCGAAAAAACCG+TGG - chr6_1:31292300-31292319 None:intergenic 40.0%
!! CAAAGCTTCGGTGTTGTATA+TGG + chr6_1:31292462-31292481 Msa0882270:CDS 40.0%
TTCTCCAAAAACGTCTTCAG+CGG - chr6_1:31292895-31292914 None:intergenic 40.0%
!! CGTTTTTGGAGAAGCACAAA+CGG + chr6_1:31292902-31292921 Msa0882270:CDS 40.0%
! CTTCTTGTTGTCGTACTGTT+TGG + chr6_1:31292937-31292956 Msa0882270:CDS 40.0%
! GTACTTTCTCCAGCTATTTC+AGG + chr6_1:31292985-31293004 Msa0882270:CDS 40.0%
! TTCTCCAGCTATTTCAGGTA+AGG + chr6_1:31292990-31293009 Msa0882270:intron 40.0%
ACTACCTTACCTGAAATAGC+TGG - chr6_1:31292997-31293016 None:intergenic 40.0%
!! AAAATCCAGAGAGTCGGTTT+TGG + chr6_1:31293028-31293047 Msa0882270:intron 40.0%
! TTATACCAAAACCGACTCTC+TGG - chr6_1:31293036-31293055 None:intergenic 40.0%
!! TGTCTCAGAAGTGCTTATGT+TGG + chr6_1:31293309-31293328 Msa0882270:intron 40.0%
TTCTTCTTACCCTACAGTTC+TGG + chr6_1:31293574-31293593 Msa0882270:intron 40.0%
CTATTTGCTCTCCAACATTG+CGG + chr6_1:31293768-31293787 Msa0882270:CDS 40.0%
CTTCATCAAGACTAGTACTC+AGG + chr6_1:31293929-31293948 Msa0882270:CDS 40.0%
AAGATCTGCAAACATGGCTT+CGG - chr6_1:31294177-31294196 None:intergenic 40.0%
ATGACCAAGATCTGCAAACA+TGG - chr6_1:31294183-31294202 None:intergenic 40.0%
GAAAGTCGGAATTACTAACC+AGG - chr6_1:31294416-31294435 None:intergenic 40.0%
! AATGTTTTGCCTTGTGTTGC+AGG + chr6_1:31294498-31294517 Msa0882270:intron 40.0%
CACACCTCGAAACACATATT+TGG + chr6_1:31294654-31294673 Msa0882270:CDS 40.0%
CTGTCCAAATATGTGTTTCG+AGG - chr6_1:31294661-31294680 None:intergenic 40.0%
! TTGACTCTTGCTGTAACCAT+TGG + chr6_1:31294717-31294736 Msa0882270:CDS 40.0%
TGCTGTAACCATTGGATTTC+AGG + chr6_1:31294725-31294744 Msa0882270:CDS 40.0%
GGTTATGTCCTGAAATCCAA+TGG - chr6_1:31294736-31294755 None:intergenic 40.0%
CGGTAATTAACCGTTACACT+AGG - chr6_1:31295062-31295081 None:intergenic 40.0%
AAGCAGTTTGAGTCTCGATT+CGG - chr6_1:31295082-31295101 None:intergenic 40.0%
! GACTCAAACTGCTTTCAAGT+TGG + chr6_1:31295088-31295107 Msa0882270:intron 40.0%
!! CTTTTCAGCTTATAGGTTGG+GGG - chr6_1:31295136-31295155 None:intergenic 40.0%
GTGAAACGTTTCCATCAAGA+GGG - chr6_1:31295175-31295194 None:intergenic 40.0%
AGTGAAACGTTTCCATCAAG+AGG - chr6_1:31295176-31295195 None:intergenic 40.0%
! TTTTCCGAGTATTTGGTTGC+AGG + chr6_1:31295455-31295474 Msa0882270:intron 40.0%
AAGTCCTGCAACCAAATACT+CGG - chr6_1:31295462-31295481 None:intergenic 40.0%
AAGAAGAAGGACAAGACAAG+AGG - chr6_1:31295653-31295672 None:intergenic 40.0%
!! AGGAAGGTTTGTTACGAAGT+GGG - chr6_1:31295852-31295871 None:intergenic 40.0%
AAACCTTCCTGCATTTCACA+AGG + chr6_1:31295862-31295881 Msa0882270:CDS 40.0%
CCAATCAGAAAACGTTCTTC+AGG - chr6_1:31295935-31295954 None:intergenic 40.0%
! CCTGAAGAACGTTTTCTGAT+TGG + chr6_1:31295932-31295951 Msa0882270:CDS 40.0%
CTATACATTCGATATGGTCG+TGG - chr6_1:31295968-31295987 None:intergenic 40.0%
CACGACCATATCGAATGTAT+AGG + chr6_1:31295966-31295985 Msa0882270:CDS 40.0%
CATTGTTAGATACGGGTACA+AGG + chr6_1:31295991-31296010 Msa0882270:CDS 40.0%
ACGGGTACAAGGACATTAAA+AGG + chr6_1:31296002-31296021 Msa0882270:CDS 40.0%
CGGGTACAAGGACATTAAAA+GGG + chr6_1:31296003-31296022 Msa0882270:CDS 40.0%
AATGGAGTTTATCCAGATGG+AGG + chr6_1:31296063-31296082 Msa0882270:CDS 40.0%
GGGTTATAGATCTGCTACTA+GGG - chr6_1:31296225-31296244 None:intergenic 40.0%
AGGGTTATAGATCTGCTACT+AGG - chr6_1:31296226-31296245 None:intergenic 40.0%
! CGTCAAAAGTTGATTGCAAG+CGG - chr6_1:31296252-31296271 None:intergenic 40.0%
ATGAAAACCCGCAAGTAAGA+AGG + chr6_1:31296272-31296291 Msa0882270:CDS 40.0%
TAACAGCATGATCCAATCCA+GGG - chr6_1:31296327-31296346 None:intergenic 40.0%
TTAACAGCATGATCCAATCC+AGG - chr6_1:31296328-31296347 None:intergenic 40.0%
AGATTTAATCCAAGCCAAGG+AGG + chr6_1:31296360-31296379 Msa0882270:CDS 40.0%
GCTGGAGTTGCGTATATAAT+GGG + chr6_1:31296382-31296401 Msa0882270:CDS 40.0%
GTTTCTGCGAAAGAATTGCA+GGG + chr6_1:31296474-31296493 Msa0882270:CDS 40.0%
TTTCTGCGAAAGAATTGCAG+GGG + chr6_1:31296475-31296494 Msa0882270:CDS 40.0%
ACTTCGATAAGACTGATGTG+AGG - chr6_1:31296523-31296542 None:intergenic 40.0%
! CACATCAGTCTTATCGAAGT+TGG + chr6_1:31296523-31296542 Msa0882270:CDS 40.0%
! ATGGGTTTGAGCTTTGTGGA+TGG + chr6_1:31291619-31291638 Msa0882270:intron 45.0%
GTGGATGGAAAAACTGTGGT+TGG + chr6_1:31291634-31291653 Msa0882270:intron 45.0%
TGGAAAAACTGTGGTTGGGA+AGG + chr6_1:31291639-31291658 Msa0882270:intron 45.0%
GGAAAAACTGTGGTTGGGAA+GGG + chr6_1:31291640-31291659 Msa0882270:intron 45.0%
GTCGTTGTATTGAGATCGGA+TGG - chr6_1:31291812-31291831 None:intergenic 45.0%
TGGCCAACCAAATTCCTCAT+CGG + chr6_1:31291909-31291928 Msa0882270:intron 45.0%
TCTCCGATGAGGAATTTGGT+TGG - chr6_1:31291915-31291934 None:intergenic 45.0%
GAAGGCAAACCCAATTCAAG+GGG - chr6_1:31291995-31292014 None:intergenic 45.0%
CTGAAGGCAAACCCAATTCA+AGG - chr6_1:31291997-31292016 None:intergenic 45.0%
GAATTGGGTTTGCCTTCAGT+CGG + chr6_1:31291998-31292017 Msa0882270:intron 45.0%
! TGCTGGAAATTACCGACTGA+AGG - chr6_1:31292013-31292032 None:intergenic 45.0%
GTCGTTGGATCAAGATCGAA+CGG + chr6_1:31292056-31292075 Msa0882270:intron 45.0%
! CCGTGACGGAGTTTAGTTAT+TGG + chr6_1:31292198-31292217 Msa0882270:intron 45.0%
ATGGTTCTCTGCAGTTGTCA+TGG + chr6_1:31292406-31292425 Msa0882270:intron 45.0%
!! CTATTGAGCGCCGATGATAA+CGG + chr6_1:31292633-31292652 Msa0882270:CDS 45.0%
! CTCTTTATTCGCTGCTTTGC+AGG + chr6_1:31292773-31292792 Msa0882270:CDS 45.0%
!! TCATCGGCAGCTTGTTGATT+GGG - chr6_1:31292820-31292839 None:intergenic 45.0%
GAGCTGTCGTCGTACAAATA+CGG + chr6_1:31292841-31292860 Msa0882270:CDS 45.0%
!! TTTGGTGCTTGCATGGTCAT+AGG + chr6_1:31292955-31292974 Msa0882270:CDS 45.0%
! TGCACTTCTAAGGGCTTGTT+TGG - chr6_1:31293358-31293377 None:intergenic 45.0%
! GCCCTTAGAAGTGCAATTCT+TGG + chr6_1:31293363-31293382 Msa0882270:intron 45.0%
! TTACCCTACAGTTCTGGCAT+CGG + chr6_1:31293580-31293599 Msa0882270:intron 45.0%
ATACCGATGCCAGAACTGTA+GGG - chr6_1:31293586-31293605 None:intergenic 45.0%
CTAGCATGTCTCATACTGGT+TGG + chr6_1:31293744-31293763 Msa0882270:CDS 45.0%
CGCAATGTTGGAGAGCAAAT+AGG - chr6_1:31293770-31293789 None:intergenic 45.0%
TCAAGACTAGTACTCAGGGT+TGG + chr6_1:31293934-31293953 Msa0882270:CDS 45.0%
ACTCAGGGTTGGATTTCTCT+CGG + chr6_1:31293945-31293964 Msa0882270:CDS 45.0%
! ATCACCGGTACGTTAGTTCT+TGG + chr6_1:31293984-31294003 Msa0882270:intron 45.0%
TAGGCCAAGAACTAACGTAC+CGG - chr6_1:31293991-31294010 None:intergenic 45.0%
!!! TGTCATTTTTGCGTCTCACC+AGG + chr6_1:31294149-31294168 Msa0882270:intron 45.0%
GAAGCCATGTTTGCAGATCT+TGG + chr6_1:31294176-31294195 Msa0882270:CDS 45.0%
TCGTGAACACGTCAGAAAGT+CGG - chr6_1:31294430-31294449 None:intergenic 45.0%
AATACAGGTCCTGCAACACA+AGG - chr6_1:31294510-31294529 None:intergenic 45.0%
! GTGTTGCAGGACCTGTATTT+TGG + chr6_1:31294511-31294530 Msa0882270:intron 45.0%
AGCTTGACTCCCAACAATAG+CGG - chr6_1:31294562-31294581 None:intergenic 45.0%
TGCATGACACTGCTTGATGA+TGG - chr6_1:31294604-31294623 None:intergenic 45.0%
ATCAAGCAGTGTCATGCACT+TGG + chr6_1:31294606-31294625 Msa0882270:CDS 45.0%
CACGCTCACACATATTGAGT+TGG + chr6_1:31294948-31294967 Msa0882270:intron 45.0%
GGTTCGTGAACCTAGTGTAA+CGG + chr6_1:31295049-31295068 Msa0882270:intron 45.0%
CTGATATAACGCCCTCTTGA+TGG + chr6_1:31295161-31295180 Msa0882270:intron 45.0%
GTAAGAGGGCGAATTTGATG+TGG - chr6_1:31295221-31295240 None:intergenic 45.0%
! TGCAGGACTTGCTTGTATGA+CGG + chr6_1:31295472-31295491 Msa0882270:intron 45.0%
GACTAGTGCCATCAGAAATG+TGG - chr6_1:31295510-31295529 None:intergenic 45.0%
TGTGGCATTACGGTATTCGT+AGG + chr6_1:31295690-31295709 Msa0882270:CDS 45.0%
CACGGACAATTCCTAGACTA+GGG - chr6_1:31295772-31295791 None:intergenic 45.0%
ACACGGACAATTCCTAGACT+AGG - chr6_1:31295773-31295792 None:intergenic 45.0%
AGTAGATGAGTCCAATCCCT+GGG - chr6_1:31295796-31295815 None:intergenic 45.0%
AGGGATTGGACTCATCTACT+CGG + chr6_1:31295796-31295815 Msa0882270:CDS 45.0%
ATCTACTCGGAACTTGCAAC+TGG + chr6_1:31295809-31295828 Msa0882270:CDS 45.0%
ACGAAGTGGGTGAATATCGA+TGG - chr6_1:31295839-31295858 None:intergenic 45.0%
!! CAGGAAGGTTTGTTACGAAG+TGG - chr6_1:31295853-31295872 None:intergenic 45.0%
ACACCTTGTGAAATGCAGGA+AGG - chr6_1:31295868-31295887 None:intergenic 45.0%
TCCTGCATTTCACAAGGTGT+TGG + chr6_1:31295868-31295887 Msa0882270:CDS 45.0%
ACCAACACCTTGTGAAATGC+AGG - chr6_1:31295872-31295891 None:intergenic 45.0%
TCAGGTGAGACATATGGTAC+AGG - chr6_1:31295917-31295936 None:intergenic 45.0%
CGTTCTTCAGGTGAGACATA+TGG - chr6_1:31295923-31295942 None:intergenic 45.0%
GCTTCAGAACTCGAGAATTG+CGG - chr6_1:31296097-31296116 None:intergenic 45.0%
GATGGAAGGATGGCTGTTAT+AGG + chr6_1:31296127-31296146 Msa0882270:CDS 45.0%
!! TGGAGTTGATTCGAAGCTTC+TGG - chr6_1:31296155-31296174 None:intergenic 45.0%
!! AAGTAAGAAGGCGTCGAGTA+AGG + chr6_1:31296284-31296303 Msa0882270:CDS 45.0%
TTTCAACTGCCTAACAACCC+TGG + chr6_1:31296307-31296326 Msa0882270:CDS 45.0%
TGATCCAATCCAGGGTTGTT+AGG - chr6_1:31296319-31296338 None:intergenic 45.0%
GGCTGGAGTTGCGTATATAA+TGG + chr6_1:31296381-31296400 Msa0882270:CDS 45.0%
AATGGGACACTCGTATGTGA+AGG + chr6_1:31296399-31296418 Msa0882270:CDS 45.0%
CGTTTCTGCGAAAGAATTGC+AGG + chr6_1:31296473-31296492 Msa0882270:CDS 45.0%
!! GGGCGTCGAATTTGGATTGT+CGG + chr6_1:31291660-31291679 Msa0882270:intron 50.0%
ACACACTAACCGCGTGTATG+CGG - chr6_1:31291700-31291719 None:intergenic 50.0%
TTGAGGGGAGACCACACTAA+AGG + chr6_1:31291886-31291905 Msa0882270:intron 50.0%
! TTGGTTGGCCACCTTTAGTG+TGG - chr6_1:31291900-31291919 None:intergenic 50.0%
TAGGGAGTCTCCCCTTGAAT+TGG + chr6_1:31291982-31292001 Msa0882270:intron 50.0%
AGGGAGTCTCCCCTTGAATT+GGG + chr6_1:31291983-31292002 Msa0882270:intron 50.0%
ACCATCCGATCTCGATGCAA+CGG + chr6_1:31292143-31292162 Msa0882270:intron 50.0%
!! CTCATCGGCAGCTTGTTGAT+TGG - chr6_1:31292821-31292840 None:intergenic 50.0%
CAATCAACAAGCTGCCGATG+AGG + chr6_1:31292819-31292838 Msa0882270:CDS 50.0%
! GTCTCCGCTGAAGACGTTTT+TGG + chr6_1:31292888-31292907 Msa0882270:CDS 50.0%
!! CGTACTGTTTGGTGCTTGCA+TGG + chr6_1:31292948-31292967 Msa0882270:CDS 50.0%
GCTTGCATGGTCATAGGTGA+TGG + chr6_1:31292961-31292980 Msa0882270:CDS 50.0%
GATACCGATGCCAGAACTGT+AGG - chr6_1:31293587-31293606 None:intergenic 50.0%
!! ACAGTTCTGGCATCGGTATC+AGG + chr6_1:31293587-31293606 Msa0882270:intron 50.0%
CCAGTATGAGACATGCTAGC+AGG - chr6_1:31293743-31293762 None:intergenic 50.0%
CCTGCTAGCATGTCTCATAC+TGG + chr6_1:31293740-31293759 Msa0882270:CDS 50.0%
CTCTGTGTGTTCCGCAATGT+TGG - chr6_1:31293782-31293801 None:intergenic 50.0%
AGGGTTGGATTTCTCTCGGA+GGG + chr6_1:31293949-31293968 Msa0882270:CDS 50.0%
GGGATACTTCTCTGCATCAC+CGG + chr6_1:31293969-31293988 Msa0882270:CDS 50.0%
TATCTTACGTGGACCGCACA+TGG + chr6_1:31294019-31294038 Msa0882270:intron 50.0%
TGAAAAGGTCCTGCCATGTG+CGG - chr6_1:31294035-31294054 None:intergenic 50.0%
CTACCTTGGCCGCTATTGTT+GGG + chr6_1:31294550-31294569 Msa0882270:CDS 50.0%
AGGTGTGTACGACTTTGACG+CGG - chr6_1:31294641-31294660 None:intergenic 50.0%
! TATAGGTTGGGGGCTAGTGT+TGG - chr6_1:31295126-31295145 None:intergenic 50.0%
! CGAAGGCGTGTATCTATCAG+CGG + chr6_1:31295595-31295614 Msa0882270:CDS 50.0%
! GCGTTCCTAAAAGTGCACCA+GGG + chr6_1:31295617-31295636 Msa0882270:CDS 50.0%
! TTCCTAAAAGTGCACCAGGG+AGG + chr6_1:31295620-31295639 Msa0882270:CDS 50.0%
! ATCCTCCCTGGTGCACTTTT+AGG - chr6_1:31295625-31295644 None:intergenic 50.0%
! TAAAAGTGCACCAGGGAGGA+TGG + chr6_1:31295624-31295643 Msa0882270:CDS 50.0%
! AAAAGTGCACCAGGGAGGAT+GGG + chr6_1:31295625-31295644 Msa0882270:CDS 50.0%
TAGGAATTGTCCGTGTCCCA+GGG + chr6_1:31295777-31295796 Msa0882270:CDS 50.0%
GAGTAGATGAGTCCAATCCC+TGG - chr6_1:31295797-31295816 None:intergenic 50.0%
GATATGGTCGTGGACAAGCT+CGG - chr6_1:31295958-31295977 None:intergenic 50.0%
GTTTATCCAGATGGAGGCAG+TGG + chr6_1:31296069-31296088 Msa0882270:CDS 50.0%
ACTCGACGCCTTCTTACTTG+CGG - chr6_1:31296283-31296302 None:intergenic 50.0%
ACTGCCTAACAACCCTGGAT+TGG + chr6_1:31296312-31296331 Msa0882270:CDS 50.0%
TTAATCCAAGCCAAGGAGGC+TGG + chr6_1:31296364-31296383 Msa0882270:CDS 50.0%
GACACTCGTATGTGAAGGCA+AGG + chr6_1:31296404-31296423 Msa0882270:CDS 50.0%
AGGGTCGGTTGTACCTGAGA+AGG - chr6_1:31291132-31291151 None:intergenic 55.0%
!! GTTGGGAAGGGCGTCGAATT+TGG + chr6_1:31291652-31291671 Msa0882270:intron 55.0%
ACACGCGGTTAGTGTGTCAG+TGG + chr6_1:31291703-31291722 Msa0882270:intron 55.0%
GTTAGTGTGTCAGTGGCCGT+TGG + chr6_1:31291710-31291729 Msa0882270:intron 55.0%
AGGGGAGACCACACTAAAGG+TGG + chr6_1:31291889-31291908 Msa0882270:intron 55.0%
CACTCGCACAGTTGTCACGT+CGG + chr6_1:31292031-31292050 Msa0882270:intron 55.0%
AGTGGCCGTTGCATCGAGAT+CGG - chr6_1:31292151-31292170 None:intergenic 55.0%
!! AGCGCCGATGATAACGGTGA+AGG + chr6_1:31292639-31292658 Msa0882270:CDS 55.0%
GTACGACGACAGCTCCTCAT+CGG - chr6_1:31292836-31292855 None:intergenic 55.0%
TACGGTCCTTCATCGCAGAC+TGG + chr6_1:31292859-31292878 Msa0882270:CDS 55.0%
AAACGTCTTCAGCGGAGACG+AGG - chr6_1:31292887-31292906 None:intergenic 55.0%
CAGGGTTGGATTTCTCTCGG+AGG + chr6_1:31293948-31293967 Msa0882270:CDS 55.0%
GCTACCTTGGCCGCTATTGT+TGG + chr6_1:31294549-31294568 Msa0882270:CDS 55.0%
ACTCCCAACAATAGCGGCCA+AGG - chr6_1:31294556-31294575 None:intergenic 55.0%
GTGTGTACGACTTTGACGCG+GGG - chr6_1:31294639-31294658 None:intergenic 55.0%
GGTGTGTACGACTTTGACGC+GGG - chr6_1:31294640-31294659 None:intergenic 55.0%
! GGCGTTCCTAAAAGTGCACC+AGG + chr6_1:31295616-31295635 Msa0882270:CDS 55.0%
CTAGGTTTGGGCCCTAGTCT+AGG + chr6_1:31295758-31295777 Msa0882270:CDS 55.0%
CTAGGAATTGTCCGTGTCCC+AGG + chr6_1:31295776-31295795 Msa0882270:CDS 55.0%
ATTGTCCGTGTCCCAGGGAT+TGG + chr6_1:31295782-31295801 Msa0882270:CDS 55.0%
TGAGTCCAATCCCTGGGACA+CGG - chr6_1:31295790-31295809 None:intergenic 55.0%
TGCTCGGCCGAAATCAAGCT+TGG - chr6_1:31296175-31296194 None:intergenic 55.0%
AGTTGATTGCAAGCGGCGCA+GGG - chr6_1:31296245-31296264 None:intergenic 55.0%
! AAGTTGATTGCAAGCGGCGC+AGG - chr6_1:31296246-31296265 None:intergenic 55.0%
CTCGACGCCTTCTTACTTGC+GGG - chr6_1:31296282-31296301 None:intergenic 55.0%
ATACGCAACTCCAGCCTCCT+TGG - chr6_1:31296377-31296396 None:intergenic 55.0%
GGAATGTTGAGAGCCACAGC+TGG - chr6_1:31296502-31296521 None:intergenic 55.0%
CGTGACAACTGTGCGAGTGC+TGG - chr6_1:31292030-31292049 None:intergenic 60.0%
TCGCACAGTTGTCACGTCGG+AGG + chr6_1:31292034-31292053 Msa0882270:intron 60.0%
GTTGTCACGTCGGAGGTCGT+TGG + chr6_1:31292041-31292060 Msa0882270:intron 60.0%
GCCGTTGCATCGAGATCGGA+TGG - chr6_1:31292147-31292166 None:intergenic 60.0%
TTCGAGGGGAGACTCCGTGA+CGG + chr6_1:31292184-31292203 Msa0882270:intron 60.0%
GAGGCTCCAGTCTGCGATGA+AGG - chr6_1:31292868-31292887 None:intergenic 60.0%
GCTAGCAGGACAAGTTCGCC+TGG - chr6_1:31293729-31293748 None:intergenic 60.0%
TTACGTGGACCGCACATGGC+AGG + chr6_1:31294023-31294042 Msa0882270:intron 60.0%
GCAAACATGGCTTCGGCTCC+TGG - chr6_1:31294170-31294189 None:intergenic 60.0%
CAAGAGGAACCCATCCTCCC+TGG - chr6_1:31295637-31295656 None:intergenic 60.0%
CAACTCCAGCCTCCTTGGCT+TGG - chr6_1:31296372-31296391 None:intergenic 60.0%
GAATTGCAGGGGTCCAGCTG+TGG + chr6_1:31296486-31296505 Msa0882270:CDS 60.0%
GCGGTTCCACTGCCTCCATC+TGG - chr6_1:31296078-31296097 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 31291045 31296800 31291045 ID=Msa0882270;Name=Msa0882270
chr6_1 mRNA 31291045 31296800 31291045 ID=Msa0882270-mRNA-1;Parent=Msa0882270;Name=Msa0882270-mRNA-1;_AED=0.09;_eAED=0.09;_QI=48|1|1|1|1|1|9|236|784
chr6_1 exon 31291045 31291137 31291045 ID=Msa0882270-mRNA-1:exon:7746;Parent=Msa0882270-mRNA-1
chr6_1 exon 31292420 31292660 31292420 ID=Msa0882270-mRNA-1:exon:7747;Parent=Msa0882270-mRNA-1
chr6_1 exon 31292761 31293006 31292761 ID=Msa0882270-mRNA-1:exon:7748;Parent=Msa0882270-mRNA-1
chr6_1 exon 31293591 31293641 31293591 ID=Msa0882270-mRNA-1:exon:7749;Parent=Msa0882270-mRNA-1
chr6_1 exon 31293730 31293990 31293730 ID=Msa0882270-mRNA-1:exon:7750;Parent=Msa0882270-mRNA-1
chr6_1 exon 31294171 31294223 31294171 ID=Msa0882270-mRNA-1:exon:7751;Parent=Msa0882270-mRNA-1
chr6_1 exon 31294302 31294416 31294302 ID=Msa0882270-mRNA-1:exon:7752;Parent=Msa0882270-mRNA-1
chr6_1 exon 31294520 31294774 31294520 ID=Msa0882270-mRNA-1:exon:7753;Parent=Msa0882270-mRNA-1
chr6_1 exon 31295477 31296800 31295477 ID=Msa0882270-mRNA-1:exon:7754;Parent=Msa0882270-mRNA-1
chr6_1 five_prime_UTR 31291045 31291092 31291045 ID=Msa0882270-mRNA-1:five_prime_utr;Parent=Msa0882270-mRNA-1
chr6_1 CDS 31291093 31291137 31291093 ID=Msa0882270-mRNA-1:cds;Parent=Msa0882270-mRNA-1
chr6_1 CDS 31292420 31292660 31292420 ID=Msa0882270-mRNA-1:cds;Parent=Msa0882270-mRNA-1
chr6_1 CDS 31292761 31293006 31292761 ID=Msa0882270-mRNA-1:cds;Parent=Msa0882270-mRNA-1
chr6_1 CDS 31293591 31293641 31293591 ID=Msa0882270-mRNA-1:cds;Parent=Msa0882270-mRNA-1
chr6_1 CDS 31293730 31293990 31293730 ID=Msa0882270-mRNA-1:cds;Parent=Msa0882270-mRNA-1
chr6_1 CDS 31294171 31294223 31294171 ID=Msa0882270-mRNA-1:cds;Parent=Msa0882270-mRNA-1
chr6_1 CDS 31294302 31294416 31294302 ID=Msa0882270-mRNA-1:cds;Parent=Msa0882270-mRNA-1
chr6_1 CDS 31294520 31294774 31294520 ID=Msa0882270-mRNA-1:cds;Parent=Msa0882270-mRNA-1
chr6_1 CDS 31295477 31296564 31295477 ID=Msa0882270-mRNA-1:cds;Parent=Msa0882270-mRNA-1
chr6_1 three_prime_UTR 31296565 31296800 31296565 ID=Msa0882270-mRNA-1:three_prime_utr;Parent=Msa0882270-mRNA-1
Gene Sequence

>Msa0882270

ATGGAACCAGAATCCATAGCTTCATCTTCTCGAAATCCTTCTCAGTTGTCATGGATTAACTTGTCTAGGAATTTACTGTTAGCATATCAAAGCTTCGGTGTTGTATATGGAGATCTAAGCACATCGCCGCTCTATGTTTATAAAAGTACATTTGAAGGAAAGTTGCAGAACCACCATGATGAAGAAACTATCTTTGGTGTTTTTTCGTTGATTTTCTGGACTCTTACATTAATACCGTTGCTTAAATATGTATTCATTCTATTGAGCGCCGATGATAACGGTGAAGGTGGAACATTTGCTCTTTATTCGCTGCTTTGCAGGCATGCCAAATTTAACTTGCTTCCCAATCAACAAGCTGCCGATGAGGAGCTGTCGTCGTACAAATACGGTCCTTCATCGCAGACTGGAGCCTCGTCTCCGCTGAAGACGTTTTTGGAGAAGCACAAACGGTCAAGAACAGTTCTTCTTGTTGTCGTACTGTTTGGTGCTTGCATGGTCATAGGTGATGGTGTACTTTCTCCAGCTATTTCAGTTCTGGCATCGGTATCAGGATTAAAAGTTACGGAAACAAAATTCAATAATGGCGAACTTGTCCTGCTAGCATGTCTCATACTGGTTGGCCTATTTGCTCTCCAACATTGCGGAACACACAGAGTTGCATTTATGTTTGCACCAATTGTAATCATCTGGCTTCTATCGATTTTTATTCTTGGGATCTATAATACGATACACTGGAATCCAAAAATAGTCTTTGCTATCTCCCCACATTATATCATCAAGTTCTTCATCAAGACTAGTACTCAGGGTTGGATTTCTCTCGGAGGGATACTTCTCTGCATCACCGGAGCCGAAGCCATGTTTGCAGATCTTGGTCATTTTACTGCTTCGTCAATAAGGCTTGCCTTTGCTTTTGTTATATACCCGTGTTTGGTAATGCAATACATGGGCCAAGCAGCTTTTTTGTCTAAAAACCTCGACTCTGTTCATAATAGTTTTTACGACTCAATACCTGGACCTGTATTTTGGCCTGTTTTTGTTATTGCTACCTTGGCCGCTATTGTTGGGAGTCAAGCTACTATCACTGCTACTTTCTCCATCATCAAGCAGTGTCATGCACTTGGTTGTTTTCCCCGCGTCAAAGTCGTACACACCTCGAAACACATATTTGGACAGATATACATCCCAGAAATTAACTGGATACTTATGGTCTTGACTCTTGCTGTAACCATTGGATTTCAGGACATAACCTTAATTGGAAATGCTTATGGACTTGCTTGTATGACGGTAATGTTCATAACCACATTTCTGATGGCACTAGTCATAATCTTTGTCTGGCAGAAAAGCATCCCGATTGCTACAATATTCCTTTTGTTCTTTTGGATTGTCGAAGGCGTGTATCTATCAGCGGCGTTCCTAAAAGTGCACCAGGGAGGATGGGTTCCTCTTGTCTTGTCCTTCTTCTTCTTGATTGTTATGTATGTGTGGCATTACGGTATTCGTAGGAAGTACAAATACGATCTACACAACAAAGTTTCATTGAAATGGTTACTAGGTTTGGGCCCTAGTCTAGGAATTGTCCGTGTCCCAGGGATTGGACTCATCTACTCGGAACTTGCAACTGGAATACCATCGATATTCACCCACTTCGTAACAAACCTTCCTGCATTTCACAAGGTGTTGGTCTTTGTTTGCGTAAAATCGGTTCCTGTACCATATGTCTCACCTGAAGAACGTTTTCTGATTGGCCGAGCTTGTCCACGACCATATCGAATGTATAGGTGCATTGTTAGATACGGGTACAAGGACATTAAAAGGGATGATGGAGAGTTTGAGAATCATCTCATACAAAGTATAATGGAGTTTATCCAGATGGAGGCAGTGGAACCGCAATTCTCGAGTTCTGAAGCTTCTTCATTTGATGGAAGGATGGCTGTTATAGGTACCAGAAGCTTCGAATCAACTCCAAGCTTGATTTCGGCCGAGCAAGAAGATGTTGATATCGACGAAAGCATCCCTAGTAGCAGATCTATAACCCTGCGCCGCTTGCAATCAACTTTTGACGATGAAAACCCGCAAGTAAGAAGGCGTCGAGTAAGGTTTCAACTGCCTAACAACCCTGGATTGGATCATGCTGTTAAAGAAGAGCTTTTAGATTTAATCCAAGCCAAGGAGGCTGGAGTTGCGTATATAATGGGACACTCGTATGTGAAGGCAAGGAAATCATCGTCGTTCTTGAAAAAGCTTGTGATCGATATGGGATACTCGTTTCTGCGAAAGAATTGCAGGGGTCCAGCTGTGGCTCTCAACATTCCTCACATCAGTCTTATCGAAGTTGGAATGATATATTATGTCTAG
Protein sequence

>Msa0882270

MEPESIASSSRNPSQLSWINLSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFEGKLQNHHDEETIFGVFSLIFWTLTLIPLLKYVFILLSADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQTGASSPLKTFLEKHKRSRTVLLVVVLFGACMVIGDGVLSPAISVLASVSGLKVTETKFNNGELVLLACLILVGLFALQHCGTHRVAFMFAPIVIIWLLSIFILGIYNTIHWNPKIVFAISPHYIIKFFIKTSTQGWISLGGILLCITGAEAMFADLGHFTASSIRLAFAFVIYPCLVMQYMGQAAFLSKNLDSVHNSFYDSIPGPVFWPVFVIATLAAIVGSQATITATFSIIKQCHALGCFPRVKVVHTSKHIFGQIYIPEINWILMVLTLAVTIGFQDITLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIPIATIFLLFFWIVEGVYLSAAFLKVHQGGWVPLVLSFFFLIVMYVWHYGIRRKYKYDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGIPSIFTHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRACPRPYRMYRCIVRYGYKDIKRDDGEFENHLIQSIMEFIQMEAVEPQFSSSEASSFDGRMAVIGTRSFESTPSLISAEQEDVDIDESIPSSRSITLRRLQSTFDDENPQVRRRRVRFQLPNNPGLDHAVKEELLDLIQAKEAGVAYIMGHSYVKARKSSSFLKKLVIDMGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV*