AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0438150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0438150 MtrunA17_Chr6g0461871 98.471 785 11 1 1 784 1 785 0.0 1586
Msa0438150 MtrunA17_Chr6g0451081 56.818 792 318 11 1 784 1 776 0.0 901
Msa0438150 MtrunA17_Chr8g0387661 57.347 769 316 6 25 784 27 792 0.0 886
Msa0438150 MtrunA17_Chr3g0128831 54.286 805 322 12 12 784 4 794 0.0 849
Msa0438150 MtrunA17_Chr5g0430731 53.411 777 326 6 9 784 13 754 0.0 847
Msa0438150 MtrunA17_Chr2g0297291 50.458 765 349 6 25 784 50 789 0.0 735
Msa0438150 MtrunA17_Chr4g0052401 49.084 764 359 4 25 784 50 787 0.0 715
Msa0438150 MtrunA17_Chr8g0393241 45.501 789 391 11 22 781 18 796 0.0 682
Msa0438150 MtrunA17_Chr8g0365001 46.094 768 399 5 19 784 86 840 0.0 682
Msa0438150 MtrunA17_Chr4g0055471 43.038 790 426 7 1 784 44 815 0.0 664
Msa0438150 MtrunA17_Chr7g0268981 42.632 760 379 6 25 782 67 771 0.0 635
Msa0438150 MtrunA17_Chr2g0279131 42.765 774 416 7 19 784 95 849 0.0 622
Msa0438150 MtrunA17_Chr5g0429991 41.720 779 409 7 23 784 99 849 0.0 593
Msa0438150 MtrunA17_Chr8g0380281 39.218 793 435 7 7 784 22 782 0.0 578
Msa0438150 MtrunA17_Chr5g0430571 46.599 588 243 7 197 784 19 535 1.00e-178 523
Msa0438150 MtrunA17_Chr8g0375411 42.613 643 345 7 24 656 28 656 1.29e-175 521
Msa0438150 MtrunA17_Chr5g0413721 58.275 429 166 5 7 425 5 430 1.37e-160 488
Msa0438150 MtrunA17_Chr5g0413721 49.589 365 173 4 422 784 516 871 1.32e-113 365
Msa0438150 MtrunA17_Chr8g0344561 40.954 608 311 8 177 784 13 572 2.20e-154 462
Msa0438150 MtrunA17_Chr2g0297311 54.987 391 173 1 33 423 58 445 4.66e-141 423
Msa0438150 MtrunA17_Chr8g0365031 43.619 431 237 2 197 623 40 468 1.10e-128 395
Msa0438150 MtrunA17_Chr8g0344591 42.058 447 236 3 177 623 13 436 7.27e-120 369
Msa0438150 MtrunA17_Chr2g0297321 43.052 367 182 6 423 784 3 347 1.28e-96 304
Msa0438150 MtrunA17_Chr5g0413751 57.386 176 75 0 423 598 133 308 1.17e-70 234
Msa0438150 MtrunA17_Chr5g0413751 57.609 92 34 1 87 173 47 138 6.10e-21 94.4
Msa0438150 MtrunA17_Chr5g0430551 66.013 153 52 0 25 177 11 163 2.12e-62 207
Msa0438150 MtrunA17_Chr8g0365041 49.505 202 83 5 1 192 42 234 1.50e-51 180
Msa0438150 MtrunA17_Chr8g0344581 55.844 154 60 4 25 177 4 150 1.88e-44 157
Msa0438150 MtrunA17_Chr8g0344551 55.195 154 61 4 25 177 4 150 2.97e-44 156
Msa0438150 MtrunA17_Chr1g0159401 40.517 116 62 2 175 290 12 120 1.77e-15 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0438150 AT3G02050.1 76.172 789 183 4 1 784 1 789 0.0 1204
Msa0438150 AT4G23640.1 57.532 770 311 8 25 784 12 775 0.0 895
Msa0438150 AT1G70300.1 55.359 793 334 10 1 784 1 782 0.0 867
Msa0438150 AT2G40540.1 54.000 800 327 7 10 784 11 794 0.0 855
Msa0438150 AT2G40540.5 54.000 800 327 7 10 784 11 794 0.0 855
Msa0438150 AT2G40540.4 54.000 800 327 7 10 784 11 794 0.0 855
Msa0438150 AT2G40540.2 54.000 800 327 7 10 784 11 794 0.0 855
Msa0438150 AT2G40540.3 54.000 800 327 7 10 784 11 794 0.0 855
Msa0438150 AT5G14880.1 56.203 790 317 12 9 784 7 781 0.0 849
Msa0438150 AT2G30070.1 58.132 621 260 0 2 622 3 623 0.0 781
Msa0438150 AT2G30070.1 61.111 72 28 0 713 784 641 712 1.22e-22 103
Msa0438150 AT2G35060.4 48.276 754 361 6 33 784 66 792 0.0 706
Msa0438150 AT2G35060.1 48.276 754 361 6 33 784 66 792 0.0 706
Msa0438150 AT2G35060.3 48.276 754 361 6 33 784 66 792 0.0 706
Msa0438150 AT2G35060.2 48.212 755 361 7 33 784 66 793 0.0 702
Msa0438150 AT1G60160.1 45.038 786 407 7 1 784 65 827 0.0 702
Msa0438150 AT1G31120.1 48.404 752 368 4 33 784 65 796 0.0 697
Msa0438150 AT4G19960.2 47.694 759 381 6 29 784 62 807 0.0 674
Msa0438150 AT4G19960.1 46.710 775 381 7 29 784 62 823 0.0 665
Msa0438150 AT4G19960.3 46.115 785 381 7 29 784 62 833 0.0 661
Msa0438150 AT4G13420.1 42.746 772 407 9 12 782 46 783 0.0 637
Msa0438150 AT2G30070.2 56.773 502 217 0 121 622 2 503 0.0 625
Msa0438150 AT2G30070.2 61.111 72 28 0 713 784 521 592 9.10e-23 103
Msa0438150 AT4G33530.1 40.736 788 423 8 14 784 95 855 0.0 607
Msa0438150 AT5G09400.1 41.244 788 413 7 19 784 99 858 0.0 592
Msa0438150 AT4G19960.4 46.870 591 301 5 197 784 6 586 2.18e-177 522
Msa0438150 AT4G33530.2 40.063 639 342 6 162 784 14 627 7.30e-169 501

Find 193 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGTAACCATTGGATTTC+AGG 0.110674 3_3:+2300285 Msa0438150:CDS
TTTCAGGACATAACCTTAAT+TGG 0.151323 3_3:+2300301 Msa0438150:CDS
CTCTTTATTCGCTGCTTTGC+AGG 0.205975 3_3:+2298333 Msa0438150:CDS
ACCATAAGCATTTCCAATTA+AGG 0.215797 3_3:-2300314 None:intergenic
GTACTTTCTCCAGCTATTTC+AGG 0.226069 3_3:+2298545 Msa0438150:CDS
GTGTTGCAGGACCTGTATTT+TGG 0.244964 3_3:+2300071 Msa0438150:intron
ATTGGGAAGCAAGTTAAATT+TGG 0.262524 3_3:-2298360 None:intergenic
CACACCTCGAAACACATATT+TGG 0.267140 3_3:+2300214 Msa0438150:CDS
ACGGGTACAAGGACATTAAA+AGG 0.272084 3_3:+2301562 Msa0438150:CDS
ATTGAAATGGTTACTAGGTT+TGG 0.295346 3_3:+2301305 Msa0438150:CDS
CTAGGAAAATCTAACCTAAA+TGG 0.297810 3_3:-2302139 None:intergenic
ACCTTAATTGGAAATGCTTA+TGG 0.301902 3_3:+2300313 Msa0438150:CDS
TCATTCAAGTATGGTGAAAA+AGG 0.303717 3_3:-2302263 None:intergenic
TCTGAAGCTTCTTCATTTGA+TGG 0.310126 3_3:+2301669 Msa0438150:CDS
CAAAGCTTCGGTGTTGTATA+TGG 0.317218 3_3:+2298022 Msa0438150:CDS
TGGAGTTGATTCGAAGCTTC+TGG 0.317444 3_3:-2301712 None:intergenic
ACAGTTCTGGCATCGGTATC+AGG 0.318446 3_3:+2299147 Msa0438150:intron
AGGATGTAAAATTTACAAAA+TGG 0.320235 3_3:-2302243 None:intergenic
GAAGATGAAGCTATGGATTC+TGG 0.325547 3_3:-2296657 None:intergenic
GGCTGGAGTTGCGTATATAA+TGG 0.328115 3_3:+2301941 Msa0438150:CDS
TTGAAATGGTTACTAGGTTT+GGG 0.329362 3_3:+2301306 Msa0438150:CDS
GATGGAAGGATGGCTGTTAT+AGG 0.329614 3_3:+2301687 Msa0438150:CDS
ATAAGTATCCAGTTAATTTC+TGG 0.335195 3_3:-2300250 None:intergenic
TGATATATGATACAATATTA+TGG 0.335543 3_3:+2302332 Msa0438150:three_prime_UTR
TATACATCCCAGAAATTAAC+TGG 0.342006 3_3:+2300242 Msa0438150:CDS
ACAACAAAGTTTCATTGAAA+TGG 0.345551 3_3:+2301292 Msa0438150:CDS
ATCAACTCCAAGCTTGATTT+CGG 0.358230 3_3:+2301725 Msa0438150:CDS
AGAAATTAACTGGATACTTA+TGG 0.362899 3_3:+2300252 Msa0438150:CDS
GCTACCTTGGCCGCTATTGT+TGG 0.373549 3_3:+2300109 Msa0438150:CDS
CTCATCGGCAGCTTGTTGAT+TGG 0.374737 3_3:-2298378 None:intergenic
CGTTTCTGCGAAAGAATTGC+AGG 0.376232 3_3:+2302033 Msa0438150:CDS
CTCGACGCCTTCTTACTTGC+GGG 0.386663 3_3:-2301839 None:intergenic
TCATCTCATACAAAGTATAA+TGG 0.387176 3_3:+2301605 Msa0438150:CDS
CATGATGAAGAAACTATCTT+TGG 0.391665 3_3:+2298109 Msa0438150:CDS
GAAGCCATGTTTGCAGATCT+TGG 0.393510 3_3:+2299736 Msa0438150:CDS
TCATCGGCAGCTTGTTGATT+GGG 0.394227 3_3:-2298377 None:intergenic
CTTCTTGTTGTCGTACTGTT+TGG 0.394514 3_3:+2298497 Msa0438150:CDS
ACGGAAACAAAATTCAATAA+TGG 0.397484 3_3:+2299180 Msa0438150:CDS
TTGCACCAATTGTAATCATC+TGG 0.398378 3_3:+2299374 Msa0438150:CDS
AAAAGGAATATTGTAGCAAT+CGG 0.405929 3_3:-2301117 None:intergenic
TTGACTCTTGCTGTAACCAT+TGG 0.407207 3_3:+2300277 Msa0438150:CDS
TGATCCAATCCAGGGTTGTT+AGG 0.412649 3_3:-2301876 None:intergenic
TAAGTATCCAGTTAATTTCT+GGG 0.413836 3_3:-2300249 None:intergenic
CTACCTTGGCCGCTATTGTT+GGG 0.413857 3_3:+2300110 Msa0438150:CDS
CAATGACCATCATTCAAGTA+TGG 0.415193 3_3:-2302272 None:intergenic
GGTCTTTGTTTGCGTAAAAT+CGG 0.416825 3_3:+2301449 Msa0438150:CDS
TTTGGTGCTTGCATGGTCAT+AGG 0.421597 3_3:+2298515 Msa0438150:CDS
CACATCAGTCTTATCGAAGT+TGG 0.424667 3_3:+2302083 Msa0438150:CDS
CTGTTAGCATATCAAAGCTT+CGG 0.428880 3_3:+2298010 Msa0438150:CDS
AAGTTGATTGCAAGCGGCGC+AGG 0.430238 3_3:-2301803 None:intergenic
CTAGGAATTGTCCGTGTCCC+AGG 0.433982 3_3:+2301336 Msa0438150:CDS
CCAATCAGAAAACGTTCTTC+AGG 0.435007 3_3:-2301492 None:intergenic
GTTTATAAAAGTACATTTGA+AGG 0.435121 3_3:+2298070 Msa0438150:CDS
CTTCATCAAGACTAGTACTC+AGG 0.438904 3_3:+2299489 Msa0438150:CDS
CGCAATGTTGGAGAGCAAAT+AGG 0.439763 3_3:-2299327 None:intergenic
ATCTACTCGGAACTTGCAAC+TGG 0.441741 3_3:+2301369 Msa0438150:CDS
AAGTAAGAAGGCGTCGAGTA+AGG 0.442966 3_3:+2301844 Msa0438150:CDS
CAACTCCAGCCTCCTTGGCT+TGG 0.448016 3_3:-2301929 None:intergenic
GTTTCATTGAAATGGTTACT+AGG 0.450379 3_3:+2301300 Msa0438150:CDS
CCTGCTAGCATGTCTCATAC+TGG 0.452739 3_3:+2299300 Msa0438150:CDS
TGCTCGGCCGAAATCAAGCT+TGG 0.452895 3_3:-2301732 None:intergenic
ATTGTCCGTGTCCCAGGGAT+TGG 0.453671 3_3:+2301342 Msa0438150:CDS
GCGGTTCCACTGCCTCCATC+TGG 0.454956 3_3:-2301635 None:intergenic
GTTATGTATGTGTGGCATTA+CGG 0.456184 3_3:+2301240 Msa0438150:CDS
CGACAATCCAAAAGAACAAA+AGG 0.456707 3_3:-2301134 None:intergenic
GCTGGAGTTGCGTATATAAT+GGG 0.459552 3_3:+2301942 Msa0438150:CDS
ATGGTTCTCTGCAGTTGTCA+TGG 0.466926 3_3:+2297966 Msa0438150:intron
CAAAGATAGTTTCTTCATCA+TGG 0.471376 3_3:-2298108 None:intergenic
GGGTTATAGATCTGCTACTA+GGG 0.472351 3_3:-2301782 None:intergenic
CACTAGTCATAATCTTTGTC+TGG 0.474410 3_3:+2301082 Msa0438150:CDS
GAGGCTCCAGTCTGCGATGA+AGG 0.475101 3_3:-2298425 None:intergenic
ATGAAAACCCGCAAGTAAGA+AGG 0.476574 3_3:+2301832 Msa0438150:CDS
ATCTTCTCGAAATCCTTCTC+AGG 0.477411 3_3:+2296674 Msa0438150:CDS
CTAGGTTTGGGCCCTAGTCT+AGG 0.478706 3_3:+2301318 Msa0438150:CDS
ATACGCAACTCCAGCCTCCT+TGG 0.478895 3_3:-2301934 None:intergenic
CTCTGTGTGTTCCGCAATGT+TGG 0.480499 3_3:-2299339 None:intergenic
TTAACAGCATGATCCAATCC+AGG 0.482648 3_3:-2301885 None:intergenic
TCCTGCATTTCACAAGGTGT+TGG 0.483278 3_3:+2301428 Msa0438150:CDS
TTAATCCAAGCCAAGGAGGC+TGG 0.483772 3_3:+2301924 Msa0438150:CDS
AAGATCTGCAAACATGGCTT+CGG 0.484207 3_3:-2299734 None:intergenic
ATGCACCTATACATTCGATA+TGG 0.486036 3_3:-2301531 None:intergenic
CACGACCATATCGAATGTAT+AGG 0.487235 3_3:+2301526 Msa0438150:CDS
TATAGGTGCATTGTTAGATA+CGG 0.488450 3_3:+2301543 Msa0438150:CDS
TAAAAGTGCACCAGGGAGGA+TGG 0.489671 3_3:+2301184 Msa0438150:CDS
CGTTCTTCAGGTGAGACATA+TGG 0.492867 3_3:-2301480 None:intergenic
TTCTTCATTTGATGGAAGGA+TGG 0.493112 3_3:+2301677 Msa0438150:CDS
AGAAGCCAGATGATTACAAT+TGG 0.494086 3_3:-2299379 None:intergenic
ACTGCCTAACAACCCTGGAT+TGG 0.494344 3_3:+2301872 Msa0438150:CDS
AGGGTTATAGATCTGCTACT+AGG 0.501190 3_3:-2301783 None:intergenic
CTATTGAGCGCCGATGATAA+CGG 0.504444 3_3:+2298193 Msa0438150:CDS
AAGCTTCTTCATTTGATGGA+AGG 0.505745 3_3:+2301673 Msa0438150:CDS
AAGGACATTAAAAGGGATGA+TGG 0.507864 3_3:+2301570 Msa0438150:CDS
GTGTTTGGTAATGCAATACA+TGG 0.510091 3_3:+2299888 Msa0438150:CDS
GGTATCAGGATTAAAAGTTA+CGG 0.511408 3_3:+2299161 Msa0438150:CDS
CTGTCCAAATATGTGTTTCG+AGG 0.511421 3_3:-2300218 None:intergenic
GATATATTATGTCTAGATTG+TGG 0.513129 3_3:+2302109 Msa0438150:exon
TACGGTCCTTCATCGCAGAC+TGG 0.516475 3_3:+2298419 Msa0438150:CDS
ATCAAGCAGTGTCATGCACT+TGG 0.517666 3_3:+2300166 Msa0438150:CDS
ATTTCGAGAAGATGAAGCTA+TGG 0.518729 3_3:-2296664 None:intergenic
ACCAACACCTTGTGAAATGC+AGG 0.521396 3_3:-2301429 None:intergenic
CGTACTGTTTGGTGCTTGCA+TGG 0.524544 3_3:+2298508 Msa0438150:CDS
TGTCATGGATTAACTTGTCT+AGG 0.526123 3_3:+2297981 Msa0438150:CDS
GGCGTTCCTAAAAGTGCACC+AGG 0.530505 3_3:+2301176 Msa0438150:CDS
AAAGGAATATTGTAGCAATC+GGG 0.530724 3_3:-2301116 None:intergenic
CGGGTACAAGGACATTAAAA+GGG 0.532081 3_3:+2301563 Msa0438150:CDS
GATATCAACATCTTCTTGCT+CGG 0.532591 3_3:-2301748 None:intergenic
TTTAGATTTAATCCAAGCCA+AGG 0.535244 3_3:+2301917 Msa0438150:CDS
CATTGTTAGATACGGGTACA+AGG 0.540496 3_3:+2301551 Msa0438150:CDS
ACTCAGGGTTGGATTTCTCT+CGG 0.541690 3_3:+2299505 Msa0438150:CDS
GAGCTGTCGTCGTACAAATA+CGG 0.542689 3_3:+2298401 Msa0438150:CDS
GTTTATCCAGATGGAGGCAG+TGG 0.542753 3_3:+2301629 Msa0438150:CDS
CTAGCATGTCTCATACTGGT+TGG 0.543181 3_3:+2299304 Msa0438150:CDS
ACTCCCAACAATAGCGGCCA+AGG 0.543271 3_3:-2300113 None:intergenic
TTACCCTACAGTTCTGGCAT+CGG 0.546800 3_3:+2299140 Msa0438150:intron
ACTACCTTACCTGAAATAGC+TGG 0.548887 3_3:-2298554 None:intergenic
TGCATGACACTGCTTGATGA+TGG 0.549256 3_3:-2300161 None:intergenic
ACACGGACAATTCCTAGACT+AGG 0.553888 3_3:-2301330 None:intergenic
TCAAGACTAGTACTCAGGGT+TGG 0.554454 3_3:+2299494 Msa0438150:CDS
TCTTGATTGTTATGTATGTG+TGG 0.554494 3_3:+2301232 Msa0438150:CDS
GTTCATAACCACATTTCTGA+TGG 0.556704 3_3:+2301059 Msa0438150:CDS
CATAACAATCAAGAAGAAGA+AGG 0.558991 3_3:-2301223 None:intergenic
ATGACCAAGATCTGCAAACA+TGG 0.559044 3_3:-2299740 None:intergenic
CAAGAGGAACCCATCCTCCC+TGG 0.559228 3_3:-2301194 None:intergenic
TATAATGGAGTTTATCCAGA+TGG 0.560256 3_3:+2301620 Msa0438150:CDS
GGAATGTTGAGAGCCACAGC+TGG 0.564106 3_3:-2302059 None:intergenic
AAAAGTGCACCAGGGAGGAT+GGG 0.564191 3_3:+2301185 Msa0438150:CDS
CGTCAAAAGTTGATTGCAAG+CGG 0.565019 3_3:-2301809 None:intergenic
AATACCTTCACCGTTATCAT+CGG 0.565220 3_3:-2298203 None:intergenic
AGGAAGGTTTGTTACGAAGT+GGG 0.566294 3_3:-2301409 None:intergenic
ACTCGACGCCTTCTTACTTG+CGG 0.568178 3_3:-2301840 None:intergenic
CAGGAAGGTTTGTTACGAAG+TGG 0.569332 3_3:-2301410 None:intergenic
TTTCAACTGCCTAACAACCC+TGG 0.571708 3_3:+2301867 Msa0438150:CDS
CCAGTATGAGACATGCTAGC+AGG 0.572488 3_3:-2299300 None:intergenic
GGATCTATAATACGATACAC+TGG 0.573433 3_3:+2299419 Msa0438150:CDS
AGAACTTGATGATATAATGT+GGG 0.574528 3_3:-2299468 None:intergenic
CAATGATAAAATCAAGAATG+AGG 0.575181 3_3:-2302203 None:intergenic
AGGGTTGGATTTCTCTCGGA+GGG 0.577288 3_3:+2299509 Msa0438150:CDS
GGTTATGTCCTGAAATCCAA+TGG 0.581083 3_3:-2300293 None:intergenic
GTACGACGACAGCTCCTCAT+CGG 0.584229 3_3:-2298393 None:intergenic
AAGAAGAAGGACAAGACAAG+AGG 0.585159 3_3:-2301210 None:intergenic
TCAGGTGAGACATATGGTAC+AGG 0.585971 3_3:-2301474 None:intergenic
TTCATCAAGACTAGTACTCA+GGG 0.586587 3_3:+2299490 Msa0438150:CDS
CACGGACAATTCCTAGACTA+GGG 0.586686 3_3:-2301329 None:intergenic
GGTGTGTACGACTTTGACGC+GGG 0.588179 3_3:-2300197 None:intergenic
GGGATACTTCTCTGCATCAC+CGG 0.588408 3_3:+2299529 Msa0438150:CDS
GCTTGCATGGTCATAGGTGA+TGG 0.589102 3_3:+2298521 Msa0438150:CDS
ATAGGTGCATTGTTAGATAC+GGG 0.589766 3_3:+2301544 Msa0438150:CDS
TAGGAATTGTCCGTGTCCCA+GGG 0.591674 3_3:+2301337 Msa0438150:CDS
AAGAACTTGATGATATAATG+TGG 0.595238 3_3:-2299469 None:intergenic
CGGGTATATAACAAAAGCAA+AGG 0.595997 3_3:-2299866 None:intergenic
AGTTGATTGCAAGCGGCGCA+GGG 0.596111 3_3:-2301802 None:intergenic
GATATGGTCGTGGACAAGCT+CGG 0.598042 3_3:-2301515 None:intergenic
CAATCAACAAGCTGCCGATG+AGG 0.599619 3_3:+2298379 Msa0438150:CDS
AGGGTCGGTTGTACCTGAGA+AGG 0.600575 3_3:-2296687 None:intergenic
AGTAGATGAGTCCAATCCCT+GGG 0.601618 3_3:-2301353 None:intergenic
ATGTATTGCATTACCAAACA+CGG 0.601781 3_3:-2299886 None:intergenic
GACACTCGTATGTGAAGGCA+AGG 0.602824 3_3:+2301964 Msa0438150:CDS
AAACGTCTTCAGCGGAGACG+AGG 0.602875 3_3:-2298444 None:intergenic
GAGTAGATGAGTCCAATCCC+TGG 0.603429 3_3:-2301354 None:intergenic
ATGAATACATATTTAAGCAA+CGG 0.604438 3_3:-2298169 None:intergenic
GTTTCTGCGAAAGAATTGCA+GGG 0.607197 3_3:+2302034 Msa0438150:CDS
AACTATTATGAACAGAGTCG+AGG 0.607255 3_3:-2299936 None:intergenic
ACGAAGTGGGTGAATATCGA+TGG 0.607427 3_3:-2301396 None:intergenic
CTATACATTCGATATGGTCG+TGG 0.608299 3_3:-2301525 None:intergenic
GCTTCAGAACTCGAGAATTG+CGG 0.608404 3_3:-2301654 None:intergenic
TAACAGCATGATCCAATCCA+GGG 0.608772 3_3:-2301884 None:intergenic
TGTGGCATTACGGTATTCGT+AGG 0.609257 3_3:+2301250 Msa0438150:CDS
GAATTGCAGGGGTCCAGCTG+TGG 0.613283 3_3:+2302046 Msa0438150:CDS
GACTAGTGCCATCAGAAATG+TGG 0.617430 3_3:-2301067 None:intergenic
AATGTCGATTTGTAACTACT+AGG 0.618260 3_3:-2302157 None:intergenic
TGCAGGACTTGCTTGTATGA+CGG 0.622018 3_3:+2301032 Msa0438150:intron
AGCGCCGATGATAACGGTGA+AGG 0.624946 3_3:+2298199 Msa0438150:CDS
AATGGGACACTCGTATGTGA+AGG 0.630197 3_3:+2301959 Msa0438150:CDS
TGAGTCCAATCCCTGGGACA+CGG 0.634316 3_3:-2301347 None:intergenic
AGATAGTTTCTTCATCATGG+TGG 0.637899 3_3:-2298105 None:intergenic
AGGTGTGTACGACTTTGACG+CGG 0.639117 3_3:-2300198 None:intergenic
AAACCTTCCTGCATTTCACA+AGG 0.643965 3_3:+2301422 Msa0438150:CDS
AATGGAGTTTATCCAGATGG+AGG 0.651775 3_3:+2301623 Msa0438150:CDS
AGCTTGACTCCCAACAATAG+CGG 0.652223 3_3:-2300119 None:intergenic
TGTATTGCATTACCAAACAC+GGG 0.653373 3_3:-2299885 None:intergenic
CGAAGGCGTGTATCTATCAG+CGG 0.653373 3_3:+2301155 Msa0438150:CDS
AGGGATTGGACTCATCTACT+CGG 0.657568 3_3:+2301356 Msa0438150:CDS
CTATTTGCTCTCCAACATTG+CGG 0.663991 3_3:+2299328 Msa0438150:CDS
TTTCTGCGAAAGAATTGCAG+GGG 0.665372 3_3:+2302035 Msa0438150:CDS
ACACCTTGTGAAATGCAGGA+AGG 0.668467 3_3:-2301425 None:intergenic
CAGGGTTGGATTTCTCTCGG+AGG 0.669872 3_3:+2299508 Msa0438150:CDS
TTCCTAAAAGTGCACCAGGG+AGG 0.703180 3_3:+2301180 Msa0438150:CDS
TGTTTGGTAATGCAATACAT+GGG 0.708247 3_3:+2299889 Msa0438150:CDS
GAACTTGATGATATAATGTG+GGG 0.708764 3_3:-2299467 None:intergenic
AGATTTAATCCAAGCCAAGG+AGG 0.711722 3_3:+2301920 Msa0438150:CDS
ACTTCGATAAGACTGATGTG+AGG 0.732857 3_3:-2302080 None:intergenic
GTGTGTACGACTTTGACGCG+GGG 0.733832 3_3:-2300196 None:intergenic
GCGTTCCTAAAAGTGCACCA+GGG 0.755406 3_3:+2301177 Msa0438150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATGAATTATATGATT+TGG + chr3_3:2300481-2300500 Msa0438150:intron 10.0%
!!! AACTATAATTTAAGTTTTTT+CGG - chr3_3:2300803-2300822 None:intergenic 10.0%
!! ATTTAACGAATAATAATACT+TGG - chr3_3:2297923-2297942 None:intergenic 15.0%
!!! AAATGTATCGATTTTTTTTA+TGG + chr3_3:2297947-2297966 Msa0438150:intron 15.0%
!! ACTTGAAACATAAATTTAAA+AGG - chr3_3:2298253-2298272 None:intergenic 15.0%
!!! TTTTAAATTTATGTTTCAAG+TGG + chr3_3:2298252-2298271 Msa0438150:intron 15.0%
!!! GCTTAAATTTAAAGTTATAA+GGG - chr3_3:2299629-2299648 None:intergenic 15.0%
!!! AAAACAAATTGATTTCATTA+AGG - chr3_3:2300029-2300048 None:intergenic 15.0%
!! AATTGCATATAAATAAGTTT+GGG - chr3_3:2300457-2300476 None:intergenic 15.0%
!! TAATTGCATATAAATAAGTT+TGG - chr3_3:2300458-2300477 None:intergenic 15.0%
!! TGATATATGATACAATATTA+TGG + chr3_3:2302332-2302351 Msa0438150:three_prime_UTR 15.0%
!! AAAAAAACTAAACTCACATA+TGG + chr3_3:2296632-2296651 Msa0438150:exon 20.0%
!!! TTTTGATTCAAATCTTCTAT+TGG + chr3_3:2296872-2296891 Msa0438150:intron 20.0%
!!! TTCTTTAGTGTATTTTTGAT+GGG + chr3_3:2297161-2297180 Msa0438150:intron 20.0%
!!! TTTTAAAAACTAAAATACCG+AGG - chr3_3:2297323-2297342 None:intergenic 20.0%
!! AATAAAATAAACATCTGCAA+TGG + chr3_3:2297674-2297693 Msa0438150:intron 20.0%
!!! CTACTTTGAATAATTTTCTA+TGG + chr3_3:2297875-2297894 Msa0438150:intron 20.0%
!!! GTTTATAAAAGTACATTTGA+AGG + chr3_3:2298070-2298089 Msa0438150:CDS 20.0%
!! ATGAATACATATTTAAGCAA+CGG - chr3_3:2298172-2298191 None:intergenic 20.0%
!! TCTTATCATATAAGTTCTTA+TGG + chr3_3:2298652-2298671 Msa0438150:intron 20.0%
!!! TTCTATCGATTTTTATTCTT+GGG + chr3_3:2299398-2299417 Msa0438150:CDS 20.0%
!!! CGCTTAAATTTAAAGTTATA+AGG - chr3_3:2299630-2299649 None:intergenic 20.0%
!! CAAAACAATATGATAAACAT+TGG - chr3_3:2300862-2300881 None:intergenic 20.0%
!! AGGATGTAAAATTTACAAAA+TGG - chr3_3:2302246-2302265 None:intergenic 20.0%
!! TTTGAGATTGAGATAAGAAA+GGG - chr3_3:2296709-2296728 None:intergenic 25.0%
!!! ATTTCATACTTTGAGATTTG+AGG + chr3_3:2296934-2296953 Msa0438150:intron 25.0%
!!! TTTCATACTTTGAGATTTGA+GGG + chr3_3:2296935-2296954 Msa0438150:intron 25.0%
! ATGTGTGTATACTGAATTAT+TGG - chr3_3:2296964-2296983 None:intergenic 25.0%
! TATCTGTAGCAGTAAAATTT+AGG + chr3_3:2296983-2297002 Msa0438150:intron 25.0%
! TGATAATTGATACAAGAAAG+TGG + chr3_3:2297047-2297066 Msa0438150:intron 25.0%
!!! CTTCTTTAGTGTATTTTTGA+TGG + chr3_3:2297160-2297179 Msa0438150:intron 25.0%
!! ATTTTTCGTAACCATGTTAT+TGG - chr3_3:2297807-2297826 None:intergenic 25.0%
!! GTACTTTTATAAACATAGAG+CGG - chr3_3:2298064-2298083 None:intergenic 25.0%
! GAAAATAACTTACAGCTTAA+TGG - chr3_3:2298716-2298735 None:intergenic 25.0%
!!! GTTATTTTCATAAGCTATCT+TGG + chr3_3:2298727-2298746 Msa0438150:intron 25.0%
!! AAACTTTTCATAAGCTATCT+TGG + chr3_3:2298775-2298794 Msa0438150:intron 25.0%
! TAAGCTGAAAATAAACTTAC+AGG + chr3_3:2298811-2298830 Msa0438150:intron 25.0%
! ATCTACTAAAAACTGTTGTA+TGG - chr3_3:2299051-2299070 None:intergenic 25.0%
! TGAGAATTTGAACAAGTTAA+AGG - chr3_3:2299091-2299110 None:intergenic 25.0%
! ACGGAAACAAAATTCAATAA+TGG + chr3_3:2299180-2299199 Msa0438150:CDS 25.0%
! TATCTCTAGCAAATGAAAAT+TGG - chr3_3:2299210-2299229 None:intergenic 25.0%
! GAAACAACGTGAAATTTATT+AGG - chr3_3:2299267-2299286 None:intergenic 25.0%
!!! CTTCTATCGATTTTTATTCT+TGG + chr3_3:2299397-2299416 Msa0438150:CDS 25.0%
!! AGAACTTGATGATATAATGT+GGG - chr3_3:2299471-2299490 None:intergenic 25.0%
!! AAGAACTTGATGATATAATG+TGG - chr3_3:2299472-2299491 None:intergenic 25.0%
!!! AGGGTAAATTATTTCTGAAA+AGG - chr3_3:2299610-2299629 None:intergenic 25.0%
!! AAATGAGTTACTAAGTTGAA+TGG + chr3_3:2299683-2299702 Msa0438150:intron 25.0%
! TAAGTATCCAGTTAATTTCT+GGG - chr3_3:2300252-2300271 None:intergenic 25.0%
! ATAAGTATCCAGTTAATTTC+TGG - chr3_3:2300253-2300272 None:intergenic 25.0%
! AGAAATTAACTGGATACTTA+TGG + chr3_3:2300252-2300271 Msa0438150:CDS 25.0%
!!! TTTAAGTTTTTTCGGTAAGA+GGG - chr3_3:2300795-2300814 None:intergenic 25.0%
!!! ATTTAAGTTTTTTCGGTAAG+AGG - chr3_3:2300796-2300815 None:intergenic 25.0%
! TTTCAATTGAAAACATGCAT+AGG - chr3_3:2300984-2301003 None:intergenic 25.0%
! AATACTCGGAAAACTTATTA+CGG - chr3_3:2301008-2301027 None:intergenic 25.0%
!! TAATAAGTTTTCCGAGTATT+TGG + chr3_3:2301008-2301027 Msa0438150:intron 25.0%
! AAAAGGAATATTGTAGCAAT+CGG - chr3_3:2301120-2301139 None:intergenic 25.0%
!! CAATATTCCTTTTGTTCTTT+TGG + chr3_3:2301127-2301146 Msa0438150:CDS 25.0%
! ACAACAAAGTTTCATTGAAA+TGG + chr3_3:2301292-2301311 Msa0438150:CDS 25.0%
! TCATCTCATACAAAGTATAA+TGG + chr3_3:2301605-2301624 Msa0438150:CDS 25.0%
! GATATATTATGTCTAGATTG+TGG + chr3_3:2302109-2302128 Msa0438150:exon 25.0%
!! ATTGTGGAATTTTACCATTT+AGG + chr3_3:2302125-2302144 Msa0438150:three_prime_UTR 25.0%
!!! TTAGAAACAAGTTTTCAAGA+TGG + chr3_3:2302178-2302197 Msa0438150:three_prime_UTR 25.0%
! CAATGATAAAATCAAGAATG+AGG - chr3_3:2302206-2302225 None:intergenic 25.0%
! GTTTGAGATTGAGATAAGAA+AGG - chr3_3:2296710-2296729 None:intergenic 30.0%
!! TTCATACTTTGAGATTTGAG+GGG + chr3_3:2296936-2296955 Msa0438150:intron 30.0%
! AAAGTACCTAGCTTGAAATA+TGG - chr3_3:2297644-2297663 None:intergenic 30.0%
TAAACATCTGCAATGGAATA+TGG + chr3_3:2297681-2297700 Msa0438150:intron 30.0%
AATACTTCACACCAATAACA+TGG + chr3_3:2297793-2297812 Msa0438150:intron 30.0%
CAAAGATAGTTTCTTCATCA+TGG - chr3_3:2298111-2298130 None:intergenic 30.0%
CATGATGAAGAAACTATCTT+TGG + chr3_3:2298109-2298128 Msa0438150:CDS 30.0%
!!! GTGTTTTTTCGTTGATTTTC+TGG + chr3_3:2298131-2298150 Msa0438150:CDS 30.0%
ATCATGATGCAATTATTGTC+AGG + chr3_3:2298299-2298318 Msa0438150:intron 30.0%
ATTGGGAAGCAAGTTAAATT+TGG - chr3_3:2298363-2298382 None:intergenic 30.0%
AATAAGAAAATCCAGAGAGT+CGG + chr3_3:2298582-2298601 Msa0438150:intron 30.0%
GAACTTAATTAAGCACTTCT+GGG - chr3_3:2298620-2298639 None:intergenic 30.0%
AGAACTTAATTAAGCACTTC+TGG - chr3_3:2298621-2298640 None:intergenic 30.0%
AAGCTTATGGAAACATCTAA+TGG - chr3_3:2298841-2298860 None:intergenic 30.0%
AGACAGTTTATGAAAGCTTA+TGG - chr3_3:2298854-2298873 None:intergenic 30.0%
GTTGTATGGAAATTTGAACA+CGG - chr3_3:2299037-2299056 None:intergenic 30.0%
CTTGTTCAAATTCTCAGTTA+CGG + chr3_3:2299095-2299114 Msa0438150:intron 30.0%
GGTATCAGGATTAAAAGTTA+CGG + chr3_3:2299161-2299180 Msa0438150:CDS 30.0%
! ATAAATTTCACGTTGTTTCC+AGG + chr3_3:2299268-2299287 Msa0438150:intron 30.0%
! GAGATAGCAAAGACTATTTT+TGG - chr3_3:2299448-2299467 None:intergenic 30.0%
! GAACTTGATGATATAATGTG+GGG - chr3_3:2299470-2299489 None:intergenic 30.0%
! ATTTTACTGCTTCGTCAATA+AGG + chr3_3:2299761-2299780 Msa0438150:CDS 30.0%
! TTTTACTGCTTCGTCAATAA+GGG + chr3_3:2299762-2299781 Msa0438150:CDS 30.0%
!! TTTTGTTATATACCCGTGTT+TGG + chr3_3:2299873-2299892 Msa0438150:CDS 30.0%
ATGTATTGCATTACCAAACA+CGG - chr3_3:2299889-2299908 None:intergenic 30.0%
!! TGTTTGGTAATGCAATACAT+GGG + chr3_3:2299889-2299908 Msa0438150:CDS 30.0%
! TTTTAGACAAAAAAGCTGCT+TGG - chr3_3:2299915-2299934 None:intergenic 30.0%
AAGGTAGCAATAACAAAAAC+AGG - chr3_3:2300097-2300116 None:intergenic 30.0%
!!! TGTTTTTGTTATTGCTACCT+TGG + chr3_3:2300096-2300115 Msa0438150:CDS 30.0%
TATACATCCCAGAAATTAAC+TGG + chr3_3:2300242-2300261 Msa0438150:CDS 30.0%
TTTCAGGACATAACCTTAAT+TGG + chr3_3:2300301-2300320 Msa0438150:CDS 30.0%
ACCTTAATTGGAAATGCTTA+TGG + chr3_3:2300313-2300332 Msa0438150:CDS 30.0%
ACCATAAGCATTTCCAATTA+AGG - chr3_3:2300317-2300336 None:intergenic 30.0%
CATATAAATAAGTTTGGGCT+AGG - chr3_3:2300452-2300471 None:intergenic 30.0%
! AGTTACACTTTTCAGCTTAT+AGG - chr3_3:2300703-2300722 None:intergenic 30.0%
!!! ATGTAATGCTTGTGCTATTT+TGG + chr3_3:2300831-2300850 Msa0438150:intron 30.0%
! TTCTTTTCATAATCAGTAGC+AGG - chr3_3:2300885-2300904 None:intergenic 30.0%
AAAGGAATATTGTAGCAATC+GGG - chr3_3:2301119-2301138 None:intergenic 30.0%
CATAACAATCAAGAAGAAGA+AGG - chr3_3:2301226-2301245 None:intergenic 30.0%
TCTTGATTGTTATGTATGTG+TGG + chr3_3:2301232-2301251 Msa0438150:CDS 30.0%
GTTTCATTGAAATGGTTACT+AGG + chr3_3:2301300-2301319 Msa0438150:CDS 30.0%
ATTGAAATGGTTACTAGGTT+TGG + chr3_3:2301305-2301324 Msa0438150:CDS 30.0%
TTGAAATGGTTACTAGGTTT+GGG + chr3_3:2301306-2301325 Msa0438150:CDS 30.0%
TATAGGTGCATTGTTAGATA+CGG + chr3_3:2301543-2301562 Msa0438150:CDS 30.0%
! TATAATGGAGTTTATCCAGA+TGG + chr3_3:2301620-2301639 Msa0438150:CDS 30.0%
TTTAGATTTAATCCAAGCCA+AGG + chr3_3:2301917-2301936 Msa0438150:CDS 30.0%
AAAAAGCTTGTGATCGATAT+GGG + chr3_3:2302005-2302024 Msa0438150:CDS 30.0%
CTAGGAAAATCTAACCTAAA+TGG - chr3_3:2302142-2302161 None:intergenic 30.0%
!! AATGTCGATTTGTAACTACT+AGG - chr3_3:2302160-2302179 None:intergenic 30.0%
TCATTCAAGTATGGTGAAAA+AGG - chr3_3:2302266-2302285 None:intergenic 30.0%
! TTTTCACCATACTTGAATGA+TGG + chr3_3:2302266-2302285 Msa0438150:three_prime_UTR 30.0%
ATTTCGAGAAGATGAAGCTA+TGG - chr3_3:2296667-2296686 None:intergenic 35.0%
AGATTGAGATAAGAAAGGGT+CGG - chr3_3:2296705-2296724 None:intergenic 35.0%
TATAATATTCCGCATACACG+CGG + chr3_3:2297248-2297267 Msa0438150:intron 35.0%
ACTGTCAAATCTCAATCCAA+CGG - chr3_3:2297289-2297308 None:intergenic 35.0%
TTCACATAGTCAGATATCAC+TGG - chr3_3:2297395-2297414 None:intergenic 35.0%
TATCTGACTATGTGAATGCA+AGG + chr3_3:2297399-2297418 Msa0438150:intron 35.0%
TTGCGAGAAATCTGAATTTG+AGG + chr3_3:2297430-2297449 Msa0438150:intron 35.0%
TGCGAGAAATCTGAATTTGA+GGG + chr3_3:2297431-2297450 Msa0438150:intron 35.0%
CCCTAATGAAGTTTAGTCAT+CGG - chr3_3:2297528-2297547 None:intergenic 35.0%
CCGATGACTAAACTTCATTA+GGG + chr3_3:2297525-2297544 Msa0438150:intron 35.0%
TCGAATTCAAATTGCGTTAG+TGG - chr3_3:2297730-2297749 None:intergenic 35.0%
ACTAACGCAATTTGAATTCG+AGG + chr3_3:2297729-2297748 Msa0438150:intron 35.0%
CTAACGCAATTTGAATTCGA+GGG + chr3_3:2297730-2297749 Msa0438150:intron 35.0%
TAACGCAATTTGAATTCGAG+GGG + chr3_3:2297731-2297750 Msa0438150:intron 35.0%
AGTTTAGTTATTGGCAAAGC+CGG + chr3_3:2297768-2297787 Msa0438150:intron 35.0%
! TATTGGTGTGAAGTATTCAC+CGG - chr3_3:2297790-2297809 None:intergenic 35.0%
CATTTCAGTGTAGACTTCTT+TGG + chr3_3:2297831-2297850 Msa0438150:intron 35.0%
TAGACTTCTTTGGATTTCCA+CGG + chr3_3:2297841-2297860 Msa0438150:intron 35.0%
! TTTGGATTTCCACGGTTTTT+CGG + chr3_3:2297849-2297868 Msa0438150:intron 35.0%
!! TGTCATGGATTAACTTGTCT+AGG + chr3_3:2297981-2298000 Msa0438150:CDS 35.0%
CTGTTAGCATATCAAAGCTT+CGG + chr3_3:2298010-2298029 Msa0438150:CDS 35.0%
AGATAGTTTCTTCATCATGG+TGG - chr3_3:2298108-2298127 None:intergenic 35.0%
AATACCTTCACCGTTATCAT+CGG - chr3_3:2298206-2298225 None:intergenic 35.0%
ATGATGCAATTATTGTCAGG+TGG + chr3_3:2298302-2298321 Msa0438150:intron 35.0%
TCCAAGAATTGCACTTCTAA+GGG - chr3_3:2298927-2298946 None:intergenic 35.0%
TTCCAAGAATTGCACTTCTA+AGG - chr3_3:2298928-2298947 None:intergenic 35.0%
TTGCACCAATTGTAATCATC+TGG + chr3_3:2299374-2299393 Msa0438150:CDS 35.0%
AGAAGCCAGATGATTACAAT+TGG - chr3_3:2299382-2299401 None:intergenic 35.0%
GGATCTATAATACGATACAC+TGG + chr3_3:2299419-2299438 Msa0438150:CDS 35.0%
TTCATCAAGACTAGTACTCA+GGG + chr3_3:2299490-2299509 Msa0438150:CDS 35.0%
CACGTAAGATAACTACTTGT+AGG - chr3_3:2299570-2299589 None:intergenic 35.0%
CTACAAGTAGTTATCTTACG+TGG + chr3_3:2299568-2299587 Msa0438150:intron 35.0%
CGGGTATATAACAAAAGCAA+AGG - chr3_3:2299869-2299888 None:intergenic 35.0%
TGTATTGCATTACCAAACAC+GGG - chr3_3:2299888-2299907 None:intergenic 35.0%
!! GTGTTTGGTAATGCAATACA+TGG + chr3_3:2299888-2299907 Msa0438150:CDS 35.0%
AACTATTATGAACAGAGTCG+AGG - chr3_3:2299939-2299958 None:intergenic 35.0%
! AGTTTTTACGACTCAATACC+TGG + chr3_3:2299955-2299974 Msa0438150:CDS 35.0%
ACAAAAACAGGCCAAAATAC+AGG - chr3_3:2300085-2300104 None:intergenic 35.0%
! AGCGTTGAAACCAAAACTAT+AGG + chr3_3:2300370-2300389 Msa0438150:intron 35.0%
GCGTTGAAACCAAAACTATA+GGG + chr3_3:2300371-2300390 Msa0438150:intron 35.0%
! ATGCAATCTCCCTATAGTTT+TGG - chr3_3:2300383-2300402 None:intergenic 35.0%
TATGCAAAGTTCAACTCGTT+TGG - chr3_3:2300542-2300561 None:intergenic 35.0%
! GAGCTCAAGTTTGACTTATT+TGG + chr3_3:2300588-2300607 Msa0438150:intron 35.0%
!! AAACTGCTTTCAAGTTGGTT+CGG + chr3_3:2300653-2300672 Msa0438150:intron 35.0%
! ACTTTTCAGCTTATAGGTTG+GGG - chr3_3:2300697-2300716 None:intergenic 35.0%
! CACTTTTCAGCTTATAGGTT+GGG - chr3_3:2300698-2300717 None:intergenic 35.0%
! ACACTTTTCAGCTTATAGGT+TGG - chr3_3:2300699-2300718 None:intergenic 35.0%
TGCATAGGCAAAATACAGAT+TGG - chr3_3:2300969-2300988 None:intergenic 35.0%
GTTCATAACCACATTTCTGA+TGG + chr3_3:2301059-2301078 Msa0438150:CDS 35.0%
CACTAGTCATAATCTTTGTC+TGG + chr3_3:2301082-2301101 Msa0438150:CDS 35.0%
CGACAATCCAAAAGAACAAA+AGG - chr3_3:2301137-2301156 None:intergenic 35.0%
! TTGTTCTTTTGGATTGTCGA+AGG + chr3_3:2301138-2301157 Msa0438150:CDS 35.0%
GTTATGTATGTGTGGCATTA+CGG + chr3_3:2301240-2301259 Msa0438150:CDS 35.0%
! GGTCTTTGTTTGCGTAAAAT+CGG + chr3_3:2301449-2301468 Msa0438150:CDS 35.0%
ATGCACCTATACATTCGATA+TGG - chr3_3:2301534-2301553 None:intergenic 35.0%
ATAGGTGCATTGTTAGATAC+GGG + chr3_3:2301544-2301563 Msa0438150:CDS 35.0%
AAGGACATTAAAAGGGATGA+TGG + chr3_3:2301570-2301589 Msa0438150:CDS 35.0%
! TCTGAAGCTTCTTCATTTGA+TGG + chr3_3:2301669-2301688 Msa0438150:CDS 35.0%
AAGCTTCTTCATTTGATGGA+AGG + chr3_3:2301673-2301692 Msa0438150:CDS 35.0%
TTCTTCATTTGATGGAAGGA+TGG + chr3_3:2301677-2301696 Msa0438150:CDS 35.0%
ATCAACTCCAAGCTTGATTT+CGG + chr3_3:2301725-2301744 Msa0438150:CDS 35.0%
GATATCAACATCTTCTTGCT+CGG - chr3_3:2301751-2301770 None:intergenic 35.0%
GAAAAAGCTTGTGATCGATA+TGG + chr3_3:2302004-2302023 Msa0438150:CDS 35.0%
! GATTTTATCATTGCTTCTGC+TGG + chr3_3:2302213-2302232 Msa0438150:three_prime_UTR 35.0%
CAATGACCATCATTCAAGTA+TGG - chr3_3:2302275-2302294 None:intergenic 35.0%
GAAGATGAAGCTATGGATTC+TGG - chr3_3:2296660-2296679 None:intergenic 40.0%
ATCTTCTCGAAATCCTTCTC+AGG + chr3_3:2296674-2296693 Msa0438150:CDS 40.0%
CTTCACTTCAACACTGTCTT+TGG + chr3_3:2296799-2296818 Msa0438150:intron 40.0%
!! TTTGATGGGTTTGAGCTTTG+TGG + chr3_3:2297175-2297194 Msa0438150:intron 40.0%
CTTTGTGGATGGAAAAACTG+TGG + chr3_3:2297190-2297209 Msa0438150:intron 40.0%
TGGATGGAAAAACTGTGGTT+GGG + chr3_3:2297195-2297214 Msa0438150:intron 40.0%
GACAGTCATGATTTCAACCT+CGG + chr3_3:2297303-2297322 Msa0438150:intron 40.0%
ACTGGTCGTTGTATTGAGAT+CGG - chr3_3:2297377-2297396 None:intergenic 40.0%
GCGAGAAATCTGAATTTGAG+GGG + chr3_3:2297432-2297451 Msa0438150:intron 40.0%
CTAATCTCCGATGAGGAATT+TGG - chr3_3:2297480-2297499 None:intergenic 40.0%
ACAATGACTAATCTCCGATG+AGG - chr3_3:2297487-2297506 None:intergenic 40.0%
AGTTTAGTCATCGGCAAAGT+TGG - chr3_3:2297519-2297538 None:intergenic 40.0%
GCCGATGACTAAACTTCATT+AGG + chr3_3:2297524-2297543 Msa0438150:intron 40.0%
TGAAGGCAAACCCAATTCAA+GGG - chr3_3:2297557-2297576 None:intergenic 40.0%
AACGGTCCATATTTCAAGCT+AGG + chr3_3:2297635-2297654 Msa0438150:intron 40.0%
CCAATAACTAAACTCCGTCA+CGG - chr3_3:2297762-2297781 None:intergenic 40.0%
AAGTAGAAACCGAAAAACCG+TGG - chr3_3:2297861-2297880 None:intergenic 40.0%
!! CAAAGCTTCGGTGTTGTATA+TGG + chr3_3:2298022-2298041 Msa0438150:CDS 40.0%
TTCTCCAAAAACGTCTTCAG+CGG - chr3_3:2298455-2298474 None:intergenic 40.0%
!! CGTTTTTGGAGAAGCACAAA+CGG + chr3_3:2298462-2298481 Msa0438150:CDS 40.0%
! CTTCTTGTTGTCGTACTGTT+TGG + chr3_3:2298497-2298516 Msa0438150:CDS 40.0%
! GTACTTTCTCCAGCTATTTC+AGG + chr3_3:2298545-2298564 Msa0438150:CDS 40.0%
! TTCTCCAGCTATTTCAGGTA+AGG + chr3_3:2298550-2298569 Msa0438150:intron 40.0%
ACTACCTTACCTGAAATAGC+TGG - chr3_3:2298557-2298576 None:intergenic 40.0%
!! AAAATCCAGAGAGTCGGTTT+TGG + chr3_3:2298588-2298607 Msa0438150:intron 40.0%
! TTATACCAAAACCGACTCTC+TGG - chr3_3:2298596-2298615 None:intergenic 40.0%
!! TGTCTCAGAAGTGCTTATGT+TGG + chr3_3:2298869-2298888 Msa0438150:intron 40.0%
TTCTTCTTACCCTACAGTTC+TGG + chr3_3:2299134-2299153 Msa0438150:intron 40.0%
CTATTTGCTCTCCAACATTG+CGG + chr3_3:2299328-2299347 Msa0438150:CDS 40.0%
CTTCATCAAGACTAGTACTC+AGG + chr3_3:2299489-2299508 Msa0438150:CDS 40.0%
AAGATCTGCAAACATGGCTT+CGG - chr3_3:2299737-2299756 None:intergenic 40.0%
ATGACCAAGATCTGCAAACA+TGG - chr3_3:2299743-2299762 None:intergenic 40.0%
GAAAGTCGGAATTACTAACC+AGG - chr3_3:2299976-2299995 None:intergenic 40.0%
! AATGTTTTGCCTTGTGTTGC+AGG + chr3_3:2300058-2300077 Msa0438150:intron 40.0%
CACACCTCGAAACACATATT+TGG + chr3_3:2300214-2300233 Msa0438150:CDS 40.0%
CTGTCCAAATATGTGTTTCG+AGG - chr3_3:2300221-2300240 None:intergenic 40.0%
! TTGACTCTTGCTGTAACCAT+TGG + chr3_3:2300277-2300296 Msa0438150:CDS 40.0%
TGCTGTAACCATTGGATTTC+AGG + chr3_3:2300285-2300304 Msa0438150:CDS 40.0%
GGTTATGTCCTGAAATCCAA+TGG - chr3_3:2300296-2300315 None:intergenic 40.0%
CGGTAATTAACCGTTACACT+AGG - chr3_3:2300622-2300641 None:intergenic 40.0%
AAGCAGTTTGAGTCTCGATT+CGG - chr3_3:2300642-2300661 None:intergenic 40.0%
! GACTCAAACTGCTTTCAAGT+TGG + chr3_3:2300648-2300667 Msa0438150:intron 40.0%
!! CTTTTCAGCTTATAGGTTGG+GGG - chr3_3:2300696-2300715 None:intergenic 40.0%
GTGAAACGTTTCCATCAAGA+GGG - chr3_3:2300735-2300754 None:intergenic 40.0%
AGTGAAACGTTTCCATCAAG+AGG - chr3_3:2300736-2300755 None:intergenic 40.0%
! TTTTCCGAGTATTTGGTTGC+AGG + chr3_3:2301015-2301034 Msa0438150:intron 40.0%
AAGTCCTGCAACCAAATACT+CGG - chr3_3:2301022-2301041 None:intergenic 40.0%
AAGAAGAAGGACAAGACAAG+AGG - chr3_3:2301213-2301232 None:intergenic 40.0%
!! AGGAAGGTTTGTTACGAAGT+GGG - chr3_3:2301412-2301431 None:intergenic 40.0%
AAACCTTCCTGCATTTCACA+AGG + chr3_3:2301422-2301441 Msa0438150:CDS 40.0%
CCAATCAGAAAACGTTCTTC+AGG - chr3_3:2301495-2301514 None:intergenic 40.0%
! CCTGAAGAACGTTTTCTGAT+TGG + chr3_3:2301492-2301511 Msa0438150:CDS 40.0%
CTATACATTCGATATGGTCG+TGG - chr3_3:2301528-2301547 None:intergenic 40.0%
CACGACCATATCGAATGTAT+AGG + chr3_3:2301526-2301545 Msa0438150:CDS 40.0%
CATTGTTAGATACGGGTACA+AGG + chr3_3:2301551-2301570 Msa0438150:CDS 40.0%
ACGGGTACAAGGACATTAAA+AGG + chr3_3:2301562-2301581 Msa0438150:CDS 40.0%
CGGGTACAAGGACATTAAAA+GGG + chr3_3:2301563-2301582 Msa0438150:CDS 40.0%
AATGGAGTTTATCCAGATGG+AGG + chr3_3:2301623-2301642 Msa0438150:CDS 40.0%
GGGTTATAGATCTGCTACTA+GGG - chr3_3:2301785-2301804 None:intergenic 40.0%
AGGGTTATAGATCTGCTACT+AGG - chr3_3:2301786-2301805 None:intergenic 40.0%
! CGTCAAAAGTTGATTGCAAG+CGG - chr3_3:2301812-2301831 None:intergenic 40.0%
ATGAAAACCCGCAAGTAAGA+AGG + chr3_3:2301832-2301851 Msa0438150:CDS 40.0%
TAACAGCATGATCCAATCCA+GGG - chr3_3:2301887-2301906 None:intergenic 40.0%
TTAACAGCATGATCCAATCC+AGG - chr3_3:2301888-2301907 None:intergenic 40.0%
AGATTTAATCCAAGCCAAGG+AGG + chr3_3:2301920-2301939 Msa0438150:CDS 40.0%
GCTGGAGTTGCGTATATAAT+GGG + chr3_3:2301942-2301961 Msa0438150:CDS 40.0%
GTTTCTGCGAAAGAATTGCA+GGG + chr3_3:2302034-2302053 Msa0438150:CDS 40.0%
TTTCTGCGAAAGAATTGCAG+GGG + chr3_3:2302035-2302054 Msa0438150:CDS 40.0%
ACTTCGATAAGACTGATGTG+AGG - chr3_3:2302083-2302102 None:intergenic 40.0%
! CACATCAGTCTTATCGAAGT+TGG + chr3_3:2302083-2302102 Msa0438150:CDS 40.0%
! ATGGGTTTGAGCTTTGTGGA+TGG + chr3_3:2297179-2297198 Msa0438150:intron 45.0%
GTGGATGGAAAAACTGTGGT+TGG + chr3_3:2297194-2297213 Msa0438150:intron 45.0%
TGGAAAAACTGTGGTTGGGA+AGG + chr3_3:2297199-2297218 Msa0438150:intron 45.0%
GGAAAAACTGTGGTTGGGAA+GGG + chr3_3:2297200-2297219 Msa0438150:intron 45.0%
GTCGTTGTATTGAGATCGGA+TGG - chr3_3:2297373-2297392 None:intergenic 45.0%
TGGCCAACCAAATTCCTCAT+CGG + chr3_3:2297470-2297489 Msa0438150:intron 45.0%
TCTCCGATGAGGAATTTGGT+TGG - chr3_3:2297476-2297495 None:intergenic 45.0%
GAAGGCAAACCCAATTCAAG+GGG - chr3_3:2297556-2297575 None:intergenic 45.0%
CTGAAGGCAAACCCAATTCA+AGG - chr3_3:2297558-2297577 None:intergenic 45.0%
GAATTGGGTTTGCCTTCAGT+CGG + chr3_3:2297559-2297578 Msa0438150:intron 45.0%
! TGCTGGAAATTACCGACTGA+AGG - chr3_3:2297574-2297593 None:intergenic 45.0%
GTCGTTGGATCAAGATCGAA+CGG + chr3_3:2297617-2297636 Msa0438150:intron 45.0%
! CCGTGACGGAGTTTAGTTAT+TGG + chr3_3:2297759-2297778 Msa0438150:intron 45.0%
ATGGTTCTCTGCAGTTGTCA+TGG + chr3_3:2297966-2297985 Msa0438150:intron 45.0%
!! CTATTGAGCGCCGATGATAA+CGG + chr3_3:2298193-2298212 Msa0438150:CDS 45.0%
! CTCTTTATTCGCTGCTTTGC+AGG + chr3_3:2298333-2298352 Msa0438150:CDS 45.0%
!! TCATCGGCAGCTTGTTGATT+GGG - chr3_3:2298380-2298399 None:intergenic 45.0%
GAGCTGTCGTCGTACAAATA+CGG + chr3_3:2298401-2298420 Msa0438150:CDS 45.0%
!! TTTGGTGCTTGCATGGTCAT+AGG + chr3_3:2298515-2298534 Msa0438150:CDS 45.0%
! TGCACTTCTAAGGGCTTGTT+TGG - chr3_3:2298918-2298937 None:intergenic 45.0%
! GCCCTTAGAAGTGCAATTCT+TGG + chr3_3:2298923-2298942 Msa0438150:intron 45.0%
! TTACCCTACAGTTCTGGCAT+CGG + chr3_3:2299140-2299159 Msa0438150:intron 45.0%
ATACCGATGCCAGAACTGTA+GGG - chr3_3:2299146-2299165 None:intergenic 45.0%
CTAGCATGTCTCATACTGGT+TGG + chr3_3:2299304-2299323 Msa0438150:CDS 45.0%
CGCAATGTTGGAGAGCAAAT+AGG - chr3_3:2299330-2299349 None:intergenic 45.0%
TCAAGACTAGTACTCAGGGT+TGG + chr3_3:2299494-2299513 Msa0438150:CDS 45.0%
ACTCAGGGTTGGATTTCTCT+CGG + chr3_3:2299505-2299524 Msa0438150:CDS 45.0%
! ATCACCGGTACGTTAGTTCT+TGG + chr3_3:2299544-2299563 Msa0438150:intron 45.0%
TAGGCCAAGAACTAACGTAC+CGG - chr3_3:2299551-2299570 None:intergenic 45.0%
!!! TGTCATTTTTGCGTCTCACC+AGG + chr3_3:2299709-2299728 Msa0438150:intron 45.0%
GAAGCCATGTTTGCAGATCT+TGG + chr3_3:2299736-2299755 Msa0438150:CDS 45.0%
TCGTGAACACGTCAGAAAGT+CGG - chr3_3:2299990-2300009 None:intergenic 45.0%
AATACAGGTCCTGCAACACA+AGG - chr3_3:2300070-2300089 None:intergenic 45.0%
! GTGTTGCAGGACCTGTATTT+TGG + chr3_3:2300071-2300090 Msa0438150:intron 45.0%
AGCTTGACTCCCAACAATAG+CGG - chr3_3:2300122-2300141 None:intergenic 45.0%
TGCATGACACTGCTTGATGA+TGG - chr3_3:2300164-2300183 None:intergenic 45.0%
ATCAAGCAGTGTCATGCACT+TGG + chr3_3:2300166-2300185 Msa0438150:CDS 45.0%
CACGCTCACACATATTGAGT+TGG + chr3_3:2300508-2300527 Msa0438150:intron 45.0%
GGTTCGTGAACCTAGTGTAA+CGG + chr3_3:2300609-2300628 Msa0438150:intron 45.0%
CTGATATAACGCCCTCTTGA+TGG + chr3_3:2300721-2300740 Msa0438150:intron 45.0%
GTAAGAGGGCGAATTTGATG+TGG - chr3_3:2300781-2300800 None:intergenic 45.0%
! TGCAGGACTTGCTTGTATGA+CGG + chr3_3:2301032-2301051 Msa0438150:intron 45.0%
GACTAGTGCCATCAGAAATG+TGG - chr3_3:2301070-2301089 None:intergenic 45.0%
TGTGGCATTACGGTATTCGT+AGG + chr3_3:2301250-2301269 Msa0438150:CDS 45.0%
CACGGACAATTCCTAGACTA+GGG - chr3_3:2301332-2301351 None:intergenic 45.0%
ACACGGACAATTCCTAGACT+AGG - chr3_3:2301333-2301352 None:intergenic 45.0%
AGTAGATGAGTCCAATCCCT+GGG - chr3_3:2301356-2301375 None:intergenic 45.0%
AGGGATTGGACTCATCTACT+CGG + chr3_3:2301356-2301375 Msa0438150:CDS 45.0%
ATCTACTCGGAACTTGCAAC+TGG + chr3_3:2301369-2301388 Msa0438150:CDS 45.0%
ACGAAGTGGGTGAATATCGA+TGG - chr3_3:2301399-2301418 None:intergenic 45.0%
!! CAGGAAGGTTTGTTACGAAG+TGG - chr3_3:2301413-2301432 None:intergenic 45.0%
ACACCTTGTGAAATGCAGGA+AGG - chr3_3:2301428-2301447 None:intergenic 45.0%
TCCTGCATTTCACAAGGTGT+TGG + chr3_3:2301428-2301447 Msa0438150:CDS 45.0%
ACCAACACCTTGTGAAATGC+AGG - chr3_3:2301432-2301451 None:intergenic 45.0%
TCAGGTGAGACATATGGTAC+AGG - chr3_3:2301477-2301496 None:intergenic 45.0%
CGTTCTTCAGGTGAGACATA+TGG - chr3_3:2301483-2301502 None:intergenic 45.0%
GCTTCAGAACTCGAGAATTG+CGG - chr3_3:2301657-2301676 None:intergenic 45.0%
GATGGAAGGATGGCTGTTAT+AGG + chr3_3:2301687-2301706 Msa0438150:CDS 45.0%
!! TGGAGTTGATTCGAAGCTTC+TGG - chr3_3:2301715-2301734 None:intergenic 45.0%
!! AAGTAAGAAGGCGTCGAGTA+AGG + chr3_3:2301844-2301863 Msa0438150:CDS 45.0%
TTTCAACTGCCTAACAACCC+TGG + chr3_3:2301867-2301886 Msa0438150:CDS 45.0%
TGATCCAATCCAGGGTTGTT+AGG - chr3_3:2301879-2301898 None:intergenic 45.0%
GGCTGGAGTTGCGTATATAA+TGG + chr3_3:2301941-2301960 Msa0438150:CDS 45.0%
AATGGGACACTCGTATGTGA+AGG + chr3_3:2301959-2301978 Msa0438150:CDS 45.0%
CGTTTCTGCGAAAGAATTGC+AGG + chr3_3:2302033-2302052 Msa0438150:CDS 45.0%
!! GGGCGTCGAATTTGGATTGT+CGG + chr3_3:2297220-2297239 Msa0438150:intron 50.0%
ACACACTAACCGCGTGTATG+CGG - chr3_3:2297260-2297279 None:intergenic 50.0%
TTGAGGGGAGACCACACTAA+AGG + chr3_3:2297447-2297466 Msa0438150:intron 50.0%
! TTGGTTGGCCACCTTTAGTG+TGG - chr3_3:2297461-2297480 None:intergenic 50.0%
TAGGGAGTCTCCCCTTGAAT+TGG + chr3_3:2297543-2297562 Msa0438150:intron 50.0%
AGGGAGTCTCCCCTTGAATT+GGG + chr3_3:2297544-2297563 Msa0438150:intron 50.0%
ACCATCCGATCTCGATGCAA+CGG + chr3_3:2297704-2297723 Msa0438150:intron 50.0%
!! CTCATCGGCAGCTTGTTGAT+TGG - chr3_3:2298381-2298400 None:intergenic 50.0%
CAATCAACAAGCTGCCGATG+AGG + chr3_3:2298379-2298398 Msa0438150:CDS 50.0%
! GTCTCCGCTGAAGACGTTTT+TGG + chr3_3:2298448-2298467 Msa0438150:CDS 50.0%
!! CGTACTGTTTGGTGCTTGCA+TGG + chr3_3:2298508-2298527 Msa0438150:CDS 50.0%
GCTTGCATGGTCATAGGTGA+TGG + chr3_3:2298521-2298540 Msa0438150:CDS 50.0%
GATACCGATGCCAGAACTGT+AGG - chr3_3:2299147-2299166 None:intergenic 50.0%
!! ACAGTTCTGGCATCGGTATC+AGG + chr3_3:2299147-2299166 Msa0438150:intron 50.0%
CCAGTATGAGACATGCTAGC+AGG - chr3_3:2299303-2299322 None:intergenic 50.0%
CCTGCTAGCATGTCTCATAC+TGG + chr3_3:2299300-2299319 Msa0438150:CDS 50.0%
CTCTGTGTGTTCCGCAATGT+TGG - chr3_3:2299342-2299361 None:intergenic 50.0%
AGGGTTGGATTTCTCTCGGA+GGG + chr3_3:2299509-2299528 Msa0438150:CDS 50.0%
GGGATACTTCTCTGCATCAC+CGG + chr3_3:2299529-2299548 Msa0438150:CDS 50.0%
TATCTTACGTGGACCGCACA+TGG + chr3_3:2299579-2299598 Msa0438150:intron 50.0%
TGAAAAGGTCCTGCCATGTG+CGG - chr3_3:2299595-2299614 None:intergenic 50.0%
CTACCTTGGCCGCTATTGTT+GGG + chr3_3:2300110-2300129 Msa0438150:CDS 50.0%
AGGTGTGTACGACTTTGACG+CGG - chr3_3:2300201-2300220 None:intergenic 50.0%
! TATAGGTTGGGGGCTAGTGT+TGG - chr3_3:2300686-2300705 None:intergenic 50.0%
! CGAAGGCGTGTATCTATCAG+CGG + chr3_3:2301155-2301174 Msa0438150:CDS 50.0%
! GCGTTCCTAAAAGTGCACCA+GGG + chr3_3:2301177-2301196 Msa0438150:CDS 50.0%
! TTCCTAAAAGTGCACCAGGG+AGG + chr3_3:2301180-2301199 Msa0438150:CDS 50.0%
! ATCCTCCCTGGTGCACTTTT+AGG - chr3_3:2301185-2301204 None:intergenic 50.0%
! TAAAAGTGCACCAGGGAGGA+TGG + chr3_3:2301184-2301203 Msa0438150:CDS 50.0%
! AAAAGTGCACCAGGGAGGAT+GGG + chr3_3:2301185-2301204 Msa0438150:CDS 50.0%
TAGGAATTGTCCGTGTCCCA+GGG + chr3_3:2301337-2301356 Msa0438150:CDS 50.0%
GAGTAGATGAGTCCAATCCC+TGG - chr3_3:2301357-2301376 None:intergenic 50.0%
GATATGGTCGTGGACAAGCT+CGG - chr3_3:2301518-2301537 None:intergenic 50.0%
GTTTATCCAGATGGAGGCAG+TGG + chr3_3:2301629-2301648 Msa0438150:CDS 50.0%
ACTCGACGCCTTCTTACTTG+CGG - chr3_3:2301843-2301862 None:intergenic 50.0%
ACTGCCTAACAACCCTGGAT+TGG + chr3_3:2301872-2301891 Msa0438150:CDS 50.0%
TTAATCCAAGCCAAGGAGGC+TGG + chr3_3:2301924-2301943 Msa0438150:CDS 50.0%
GACACTCGTATGTGAAGGCA+AGG + chr3_3:2301964-2301983 Msa0438150:CDS 50.0%
AGGGTCGGTTGTACCTGAGA+AGG - chr3_3:2296690-2296709 None:intergenic 55.0%
!! GTTGGGAAGGGCGTCGAATT+TGG + chr3_3:2297212-2297231 Msa0438150:intron 55.0%
ACACGCGGTTAGTGTGTCAG+TGG + chr3_3:2297263-2297282 Msa0438150:intron 55.0%
GTTAGTGTGTCAGTGGCCGT+TGG + chr3_3:2297270-2297289 Msa0438150:intron 55.0%
AGGGGAGACCACACTAAAGG+TGG + chr3_3:2297450-2297469 Msa0438150:intron 55.0%
CACTCGCACAGTTGTCACGT+CGG + chr3_3:2297592-2297611 Msa0438150:intron 55.0%
AGTGGCCGTTGCATCGAGAT+CGG - chr3_3:2297712-2297731 None:intergenic 55.0%
!! AGCGCCGATGATAACGGTGA+AGG + chr3_3:2298199-2298218 Msa0438150:CDS 55.0%
GTACGACGACAGCTCCTCAT+CGG - chr3_3:2298396-2298415 None:intergenic 55.0%
TACGGTCCTTCATCGCAGAC+TGG + chr3_3:2298419-2298438 Msa0438150:CDS 55.0%
AAACGTCTTCAGCGGAGACG+AGG - chr3_3:2298447-2298466 None:intergenic 55.0%
CAGGGTTGGATTTCTCTCGG+AGG + chr3_3:2299508-2299527 Msa0438150:CDS 55.0%
GCTACCTTGGCCGCTATTGT+TGG + chr3_3:2300109-2300128 Msa0438150:CDS 55.0%
ACTCCCAACAATAGCGGCCA+AGG - chr3_3:2300116-2300135 None:intergenic 55.0%
GTGTGTACGACTTTGACGCG+GGG - chr3_3:2300199-2300218 None:intergenic 55.0%
GGTGTGTACGACTTTGACGC+GGG - chr3_3:2300200-2300219 None:intergenic 55.0%
! GGCGTTCCTAAAAGTGCACC+AGG + chr3_3:2301176-2301195 Msa0438150:CDS 55.0%
CTAGGTTTGGGCCCTAGTCT+AGG + chr3_3:2301318-2301337 Msa0438150:CDS 55.0%
CTAGGAATTGTCCGTGTCCC+AGG + chr3_3:2301336-2301355 Msa0438150:CDS 55.0%
ATTGTCCGTGTCCCAGGGAT+TGG + chr3_3:2301342-2301361 Msa0438150:CDS 55.0%
TGAGTCCAATCCCTGGGACA+CGG - chr3_3:2301350-2301369 None:intergenic 55.0%
TGCTCGGCCGAAATCAAGCT+TGG - chr3_3:2301735-2301754 None:intergenic 55.0%
AGTTGATTGCAAGCGGCGCA+GGG - chr3_3:2301805-2301824 None:intergenic 55.0%
! AAGTTGATTGCAAGCGGCGC+AGG - chr3_3:2301806-2301825 None:intergenic 55.0%
CTCGACGCCTTCTTACTTGC+GGG - chr3_3:2301842-2301861 None:intergenic 55.0%
ATACGCAACTCCAGCCTCCT+TGG - chr3_3:2301937-2301956 None:intergenic 55.0%
GGAATGTTGAGAGCCACAGC+TGG - chr3_3:2302062-2302081 None:intergenic 55.0%
CGTGACAACTGTGCGAGTGC+TGG - chr3_3:2297591-2297610 None:intergenic 60.0%
TCGCACAGTTGTCACGTCGG+AGG + chr3_3:2297595-2297614 Msa0438150:intron 60.0%
GTTGTCACGTCGGAGGTCGT+TGG + chr3_3:2297602-2297621 Msa0438150:intron 60.0%
GCCGTTGCATCGAGATCGGA+TGG - chr3_3:2297708-2297727 None:intergenic 60.0%
TTCGAGGGGAGACTCCGTGA+CGG + chr3_3:2297745-2297764 Msa0438150:intron 60.0%
GAGGCTCCAGTCTGCGATGA+AGG - chr3_3:2298428-2298447 None:intergenic 60.0%
GCTAGCAGGACAAGTTCGCC+TGG - chr3_3:2299289-2299308 None:intergenic 60.0%
TTACGTGGACCGCACATGGC+AGG + chr3_3:2299583-2299602 Msa0438150:intron 60.0%
GCAAACATGGCTTCGGCTCC+TGG - chr3_3:2299730-2299749 None:intergenic 60.0%
CAAGAGGAACCCATCCTCCC+TGG - chr3_3:2301197-2301216 None:intergenic 60.0%
CAACTCCAGCCTCCTTGGCT+TGG - chr3_3:2301932-2301951 None:intergenic 60.0%
GAATTGCAGGGGTCCAGCTG+TGG + chr3_3:2302046-2302065 Msa0438150:CDS 60.0%
GCGGTTCCACTGCCTCCATC+TGG - chr3_3:2301638-2301657 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 2296603 2302360 2296603 ID=Msa0438150;Name=Msa0438150
chr3_3 mRNA 2296603 2302360 2296603 ID=Msa0438150-mRNA-1;Parent=Msa0438150;Name=Msa0438150-mRNA-1;_AED=0.09;_eAED=0.09;_QI=48|1|1|1|1|1|9|236|784
chr3_3 exon 2296603 2296695 2296603 ID=Msa0438150-mRNA-1:exon:519;Parent=Msa0438150-mRNA-1
chr3_3 exon 2297980 2298220 2297980 ID=Msa0438150-mRNA-1:exon:520;Parent=Msa0438150-mRNA-1
chr3_3 exon 2298321 2298566 2298321 ID=Msa0438150-mRNA-1:exon:521;Parent=Msa0438150-mRNA-1
chr3_3 exon 2299151 2299201 2299151 ID=Msa0438150-mRNA-1:exon:522;Parent=Msa0438150-mRNA-1
chr3_3 exon 2299290 2299550 2299290 ID=Msa0438150-mRNA-1:exon:523;Parent=Msa0438150-mRNA-1
chr3_3 exon 2299731 2299783 2299731 ID=Msa0438150-mRNA-1:exon:524;Parent=Msa0438150-mRNA-1
chr3_3 exon 2299862 2299976 2299862 ID=Msa0438150-mRNA-1:exon:525;Parent=Msa0438150-mRNA-1
chr3_3 exon 2300080 2300334 2300080 ID=Msa0438150-mRNA-1:exon:526;Parent=Msa0438150-mRNA-1
chr3_3 exon 2301037 2302360 2301037 ID=Msa0438150-mRNA-1:exon:527;Parent=Msa0438150-mRNA-1
chr3_3 five_prime_UTR 2296603 2296650 2296603 ID=Msa0438150-mRNA-1:five_prime_utr;Parent=Msa0438150-mRNA-1
chr3_3 CDS 2296651 2296695 2296651 ID=Msa0438150-mRNA-1:cds;Parent=Msa0438150-mRNA-1
chr3_3 CDS 2297980 2298220 2297980 ID=Msa0438150-mRNA-1:cds;Parent=Msa0438150-mRNA-1
chr3_3 CDS 2298321 2298566 2298321 ID=Msa0438150-mRNA-1:cds;Parent=Msa0438150-mRNA-1
chr3_3 CDS 2299151 2299201 2299151 ID=Msa0438150-mRNA-1:cds;Parent=Msa0438150-mRNA-1
chr3_3 CDS 2299290 2299550 2299290 ID=Msa0438150-mRNA-1:cds;Parent=Msa0438150-mRNA-1
chr3_3 CDS 2299731 2299783 2299731 ID=Msa0438150-mRNA-1:cds;Parent=Msa0438150-mRNA-1
chr3_3 CDS 2299862 2299976 2299862 ID=Msa0438150-mRNA-1:cds;Parent=Msa0438150-mRNA-1
chr3_3 CDS 2300080 2300334 2300080 ID=Msa0438150-mRNA-1:cds;Parent=Msa0438150-mRNA-1
chr3_3 CDS 2301037 2302124 2301037 ID=Msa0438150-mRNA-1:cds;Parent=Msa0438150-mRNA-1
chr3_3 three_prime_UTR 2302125 2302360 2302125 ID=Msa0438150-mRNA-1:three_prime_utr;Parent=Msa0438150-mRNA-1
Gene Sequence

>Msa0438150

ATGGAACCAGAATCCATAGCTTCATCTTCTCGAAATCCTTCTCAGTTGTCATGGATTAACTTGTCTAGGAATTTACTGTTAGCATATCAAAGCTTCGGTGTTGTATATGGAGATCTAAGCACATCGCCGCTCTATGTTTATAAAAGTACATTTGAAGGAAAGTTGCAGAACCACCATGATGAAGAAACTATCTTTGGTGTTTTTTCGTTGATTTTCTGGACTCTTACATTAATACCGTTGCTTAAATATGTATTCATTCTATTGAGCGCCGATGATAACGGTGAAGGTGGAACATTTGCTCTTTATTCGCTGCTTTGCAGGCATGCCAAATTTAACTTGCTTCCCAATCAACAAGCTGCCGATGAGGAGCTGTCGTCGTACAAATACGGTCCTTCATCGCAGACTGGAGCCTCGTCTCCGCTGAAGACGTTTTTGGAGAAGCACAAACGGTCAAGAACAGTTCTTCTTGTTGTCGTACTGTTTGGTGCTTGCATGGTCATAGGTGATGGTGTACTTTCTCCAGCTATTTCAGTTCTGGCATCGGTATCAGGATTAAAAGTTACGGAAACAAAATTCAATAATGGCGAACTTGTCCTGCTAGCATGTCTCATACTGGTTGGCCTATTTGCTCTCCAACATTGCGGAACACACAGAGTTGCATTTATGTTTGCACCAATTGTAATCATCTGGCTTCTATCGATTTTTATTCTTGGGATCTATAATACGATACACTGGAATCCAAAAATAGTCTTTGCTATCTCCCCACATTATATCATCAAGTTCTTCATCAAGACTAGTACTCAGGGTTGGATTTCTCTCGGAGGGATACTTCTCTGCATCACCGGAGCCGAAGCCATGTTTGCAGATCTTGGTCATTTTACTGCTTCGTCAATAAGGCTTGCCTTTGCTTTTGTTATATACCCGTGTTTGGTAATGCAATACATGGGCCAAGCAGCTTTTTTGTCTAAAAACCTCGACTCTGTTCATAATAGTTTTTACGACTCAATACCTGGACCTGTATTTTGGCCTGTTTTTGTTATTGCTACCTTGGCCGCTATTGTTGGGAGTCAAGCTACTATCACTGCTACTTTCTCCATCATCAAGCAGTGTCATGCACTTGGTTGTTTTCCCCGCGTCAAAGTCGTACACACCTCGAAACACATATTTGGACAGATATACATCCCAGAAATTAACTGGATACTTATGGTCTTGACTCTTGCTGTAACCATTGGATTTCAGGACATAACCTTAATTGGAAATGCTTATGGACTTGCTTGTATGACGGTAATGTTCATAACCACATTTCTGATGGCACTAGTCATAATCTTTGTCTGGCAGAAAAGCATCCCGATTGCTACAATATTCCTTTTGTTCTTTTGGATTGTCGAAGGCGTGTATCTATCAGCGGCGTTCCTAAAAGTGCACCAGGGAGGATGGGTTCCTCTTGTCTTGTCCTTCTTCTTCTTGATTGTTATGTATGTGTGGCATTACGGTATTCGTAGGAAGTACAAATACGATCTACACAACAAAGTTTCATTGAAATGGTTACTAGGTTTGGGCCCTAGTCTAGGAATTGTCCGTGTCCCAGGGATTGGACTCATCTACTCGGAACTTGCAACTGGAATACCATCGATATTCACCCACTTCGTAACAAACCTTCCTGCATTTCACAAGGTGTTGGTCTTTGTTTGCGTAAAATCGGTTCCTGTACCATATGTCTCACCTGAAGAACGTTTTCTGATTGGCCGAGCTTGTCCACGACCATATCGAATGTATAGGTGCATTGTTAGATACGGGTACAAGGACATTAAAAGGGATGATGGAGAGTTTGAGAATCATCTCATACAAAGTATAATGGAGTTTATCCAGATGGAGGCAGTGGAACCGCAATTCTCGAGTTCTGAAGCTTCTTCATTTGATGGAAGGATGGCTGTTATAGGTACCAGAAGCTTCGAATCAACTCCAAGCTTGATTTCGGCCGAGCAAGAAGATGTTGATATCGACGAAAGCATCCCTAGTAGCAGATCTATAACCCTGCGCCGCTTGCAATCAACTTTTGACGATGAAAACCCGCAAGTAAGAAGGCGTCGAGTAAGGTTTCAACTGCCTAACAACCCTGGATTGGATCATGCTGTTAAAGAAGAGCTTTTAGATTTAATCCAAGCCAAGGAGGCTGGAGTTGCGTATATAATGGGACACTCGTATGTGAAGGCAAGGAAATCATCGTCGTTCTTGAAAAAGCTTGTGATCGATATGGGATACTCGTTTCTGCGAAAGAATTGCAGGGGTCCAGCTGTGGCTCTCAACATTCCTCACATCAGTCTTATCGAAGTTGGAATGATATATTATGTCTAG
Protein sequence

>Msa0438150

MEPESIASSSRNPSQLSWINLSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFEGKLQNHHDEETIFGVFSLIFWTLTLIPLLKYVFILLSADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQTGASSPLKTFLEKHKRSRTVLLVVVLFGACMVIGDGVLSPAISVLASVSGLKVTETKFNNGELVLLACLILVGLFALQHCGTHRVAFMFAPIVIIWLLSIFILGIYNTIHWNPKIVFAISPHYIIKFFIKTSTQGWISLGGILLCITGAEAMFADLGHFTASSIRLAFAFVIYPCLVMQYMGQAAFLSKNLDSVHNSFYDSIPGPVFWPVFVIATLAAIVGSQATITATFSIIKQCHALGCFPRVKVVHTSKHIFGQIYIPEINWILMVLTLAVTIGFQDITLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIPIATIFLLFFWIVEGVYLSAAFLKVHQGGWVPLVLSFFFLIVMYVWHYGIRRKYKYDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGIPSIFTHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRACPRPYRMYRCIVRYGYKDIKRDDGEFENHLIQSIMEFIQMEAVEPQFSSSEASSFDGRMAVIGTRSFESTPSLISAEQEDVDIDESIPSSRSITLRRLQSTFDDENPQVRRRRVRFQLPNNPGLDHAVKEELLDLIQAKEAGVAYIMGHSYVKARKSSSFLKKLVIDMGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV*