Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256810 | XP_013457568.1 | 96.706 | 425 | 8 | 1 | 1 | 419 | 1 | 425 | 0.0 | 853 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256810 | sp|Q56YP2|PI5K1_ARATH | 37.059 | 170 | 107 | 0 | 167 | 336 | 77 | 246 | 3.01e-27 | 117 |
| Msa1256810 | sp|Q56YP2|PI5K1_ARATH | 37.500 | 128 | 80 | 0 | 214 | 341 | 78 | 205 | 2.75e-18 | 90.9 |
| Msa1256810 | sp|Q56YP2|PI5K1_ARATH | 30.370 | 135 | 93 | 1 | 165 | 298 | 121 | 255 | 6.38e-11 | 68.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256810 | A0A072UP26 | 96.706 | 425 | 8 | 1 | 1 | 419 | 1 | 425 | 0.0 | 853 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa1256810 | 0.842448 | 2.569723e-58 | -8.615850e-47 |
| Msa0010490 | Msa1256810 | 0.804488 | 2.109111e-49 | -8.615850e-47 |
| Msa0015930 | Msa1256810 | 0.823195 | 1.578271e-53 | -8.615850e-47 |
| Msa0020390 | Msa1256810 | 0.865018 | 8.003739e-65 | -8.615850e-47 |
| Msa0061220 | Msa1256810 | 0.802399 | 5.714813e-49 | -8.615850e-47 |
| Msa0061500 | Msa1256810 | 0.802500 | 5.448685e-49 | -8.615850e-47 |
| Msa0090570 | Msa1256810 | 0.805803 | 1.118981e-49 | -8.615850e-47 |
| Msa0115190 | Msa1256810 | 0.842885 | 1.967033e-58 | -8.615850e-47 |
| Msa0117520 | Msa1256810 | 0.802685 | 4.989722e-49 | -8.615850e-47 |
| Msa0118540 | Msa1256810 | 0.846404 | 2.218576e-59 | -8.615850e-47 |
| Msa0604290 | Msa1256810 | 0.834773 | 2.468795e-56 | -8.615850e-47 |
| Msa0613290 | Msa1256810 | 0.835035 | 2.120818e-56 | -8.615850e-47 |
| Msa0629240 | Msa1256810 | 0.828861 | 7.102829e-55 | -8.615850e-47 |
| Msa0631320 | Msa1256810 | 0.815998 | 6.937167e-52 | -8.615850e-47 |
| Msa0631350 | Msa1256810 | 0.802784 | 4.760189e-49 | -8.615850e-47 |
| Msa0641130 | Msa1256810 | 0.814704 | 1.345077e-51 | -8.615850e-47 |
| Msa0649220 | Msa1256810 | 0.807472 | 4.971603e-50 | -8.615850e-47 |
| Msa0653840 | Msa1256810 | 0.835776 | 1.378321e-56 | -8.615850e-47 |
| Msa0663910 | Msa1256810 | 0.817328 | 3.490434e-52 | -8.615850e-47 |
| Msa0669720 | Msa1256810 | 0.812523 | 4.062557e-51 | -8.615850e-47 |
| Msa0672550 | Msa1256810 | 0.829599 | 4.703336e-55 | -8.615850e-47 |
| Msa0679670 | Msa1256810 | 0.859497 | 3.971164e-63 | -8.615850e-47 |
| Msa0709120 | Msa1256810 | 0.843614 | 1.257010e-58 | -8.615850e-47 |
| Msa0711150 | Msa1256810 | 0.819982 | 8.724587e-53 | -8.615850e-47 |
| Msa0729090 | Msa1256810 | 0.810338 | 1.211141e-50 | -8.615850e-47 |
| Msa0735550 | Msa1256810 | 0.805512 | 1.288320e-49 | -8.615850e-47 |
| Msa0737600 | Msa1256810 | 0.808316 | 3.288803e-50 | -8.615850e-47 |
| Msa0746170 | Msa1256810 | 0.801003 | 1.105060e-48 | -8.615850e-47 |
| Msa0746210 | Msa1256810 | 0.807801 | 4.233496e-50 | -8.615850e-47 |
| Msa0795730 | Msa1256810 | 0.866881 | 2.061302e-65 | -8.615850e-47 |
| Msa0800370 | Msa1256810 | 0.819874 | 9.236267e-53 | -8.615850e-47 |
| Msa0816730 | Msa1256810 | 0.823885 | 1.088451e-53 | -8.615850e-47 |
| Msa0822500 | Msa1256810 | 0.806384 | 8.445628e-50 | -8.615850e-47 |
| Msa0138900 | Msa1256810 | 0.804648 | 1.952856e-49 | -8.615850e-47 |
| Msa0139670 | Msa1256810 | 0.845373 | 4.229907e-59 | -8.615850e-47 |
| Msa0152560 | Msa1256810 | 0.816826 | 4.526351e-52 | -8.615850e-47 |
| Msa0156370 | Msa1256810 | 0.811935 | 5.457685e-51 | -8.615850e-47 |
| Msa0160400 | Msa1256810 | 0.817895 | 2.601018e-52 | -8.615850e-47 |
| Msa0160960 | Msa1256810 | 0.801916 | 7.184881e-49 | -8.615850e-47 |
| Msa0162130 | Msa1256810 | 0.807666 | 4.521981e-50 | -8.615850e-47 |
| Msa0183850 | Msa1256810 | 0.837708 | 4.432793e-57 | -8.615850e-47 |
| Msa0189530 | Msa1256810 | 0.806929 | 6.477748e-50 | -8.615850e-47 |
| Msa0190310 | Msa1256810 | 0.808244 | 3.406753e-50 | -8.615850e-47 |
| Msa0190930 | Msa1256810 | 0.815777 | 7.771129e-52 | -8.615850e-47 |
| Msa0191080 | Msa1256810 | 0.806260 | 8.965863e-50 | -8.615850e-47 |
| Msa0202410 | Msa1256810 | 0.801712 | 7.910057e-49 | -8.615850e-47 |
| Msa0204960 | Msa1256810 | 0.811568 | 6.561371e-51 | -8.615850e-47 |
| Msa0213540 | Msa1256810 | 0.807035 | 6.152479e-50 | -8.615850e-47 |
| Msa0213550 | Msa1256810 | 0.800964 | 1.125548e-48 | -8.615850e-47 |
| Msa0231790 | Msa1256810 | 0.824286 | 8.763808e-54 | -8.615850e-47 |
| Msa0233250 | Msa1256810 | 0.802415 | 5.671522e-49 | -8.615850e-47 |
| Msa0233370 | Msa1256810 | 0.847431 | 1.161800e-59 | -8.615850e-47 |
| Msa1229480 | Msa1256810 | 0.803876 | 2.827147e-49 | -8.615850e-47 |
| Msa1231840 | Msa1256810 | 0.823642 | 1.240946e-53 | -8.615850e-47 |
| Msa1234620 | Msa1256810 | 0.809224 | 2.103349e-50 | -8.615850e-47 |
| Msa1256810 | Msa1265590 | 0.810534 | 1.099141e-50 | -8.615850e-47 |
| Msa1256810 | Msa1270050 | 0.810013 | 1.423644e-50 | -8.615850e-47 |
| Msa1256810 | Msa1271130 | 0.812556 | 3.994506e-51 | -8.615850e-47 |
| Msa1256810 | Msa1274380 | 0.814255 | 1.690742e-51 | -8.615850e-47 |
| Msa1256810 | Msa1274560 | 0.852404 | 4.719688e-61 | -8.615850e-47 |
| Msa1256810 | Msa1277780 | 0.811491 | 6.817339e-51 | -8.615850e-47 |
| Msa1256810 | Msa1280340 | 0.813983 | 1.941656e-51 | -8.615850e-47 |
| Msa1256810 | Msa1285250 | 0.804237 | 2.378866e-49 | -8.615850e-47 |
| Msa1256810 | Msa1298010 | 0.978064 | 4.741412e-145 | -8.615850e-47 |
| Msa1256810 | Msa1309760 | 0.800392 | 1.472930e-48 | -8.615850e-47 |
| Msa1256810 | Msa1309870 | 0.824051 | 9.952887e-54 | -8.615850e-47 |
| Msa1256810 | Msa1312440 | 0.809060 | 2.280291e-50 | -8.615850e-47 |
| Msa1256810 | Msa1312520 | 0.817867 | 2.638505e-52 | -8.615850e-47 |
| Msa1256810 | Msa1316360 | 0.819437 | 1.162192e-52 | -8.615850e-47 |
| Msa1256810 | Msa1336560 | 0.819128 | 1.366364e-52 | -8.615850e-47 |
| Msa1256810 | Msa1351540 | 0.807282 | 5.454766e-50 | -8.615850e-47 |
| Msa1256810 | Msa1355890 | 0.820875 | 5.444007e-53 | -8.615850e-47 |
| Msa1256810 | Msa1359270 | 0.833200 | 6.113848e-56 | -8.615850e-47 |
| Msa1256810 | Msa1380220 | 0.813936 | 1.988789e-51 | -8.615850e-47 |
| Msa1256810 | Msa1422810 | 0.844572 | 6.955814e-59 | -8.615850e-47 |
| Msa1256810 | Msa1443620 | 0.803870 | 2.836168e-49 | -8.615850e-47 |
| Msa1256810 | Msa1454450 | 0.816533 | 5.264605e-52 | -8.615850e-47 |
| Msa1256810 | Msa1458090 | 0.879752 | 9.639605e-70 | -8.615850e-47 |
| Msa1256810 | Msa1460320 | -0.827129 | 1.854735e-54 | -8.615850e-47 |
| Msa0382370 | Msa1256810 | 0.811643 | 6.317798e-51 | -8.615850e-47 |
| Msa0385500 | Msa1256810 | 0.830880 | 2.288709e-55 | -8.615850e-47 |
| Msa0388730 | Msa1256810 | 0.849365 | 3.388279e-60 | -8.615850e-47 |
| Msa0389210 | Msa1256810 | 0.851015 | 1.168406e-60 | -8.615850e-47 |
| Msa0403770 | Msa1256810 | 0.833451 | 5.294310e-56 | -8.615850e-47 |
| Msa0445330 | Msa1256810 | 0.843940 | 1.028222e-58 | -8.615850e-47 |
| Msa0463340 | Msa1256810 | 0.800785 | 1.224437e-48 | -8.615850e-47 |
| Msa0469620 | Msa1256810 | -0.839350 | 1.670165e-57 | -8.615850e-47 |
| Msa0994370 | Msa1256810 | 0.838852 | 2.248404e-57 | -8.615850e-47 |
| Msa0999920 | Msa1256810 | 0.811595 | 6.471002e-51 | -8.615850e-47 |
| Msa1006710 | Msa1256810 | 0.831865 | 1.310193e-55 | -8.615850e-47 |
| Msa1013070 | Msa1256810 | 0.805911 | 1.061933e-49 | -8.615850e-47 |
| Msa1024710 | Msa1256810 | 0.801419 | 9.085422e-49 | -8.615850e-47 |
| Msa1029050 | Msa1256810 | 0.828764 | 7.497811e-55 | -8.615850e-47 |
| Msa1044510 | Msa1256810 | 0.802645 | 5.085241e-49 | -8.615850e-47 |
| Msa1062040 | Msa1256810 | 0.827525 | 1.491005e-54 | -8.615850e-47 |
| Msa1071320 | Msa1256810 | 0.804153 | 2.476305e-49 | -8.615850e-47 |
| Msa1072900 | Msa1256810 | 0.815880 | 7.369166e-52 | -8.615850e-47 |
| Msa1082360 | Msa1256810 | 0.822405 | 2.410441e-53 | -8.615850e-47 |
| Msa1089460 | Msa1256810 | 0.802441 | 5.602214e-49 | -8.615850e-47 |
| Msa1094280 | Msa1256810 | 0.803379 | 3.584984e-49 | -8.615850e-47 |
| Msa1096070 | Msa1256810 | 0.817422 | 3.325810e-52 | -8.615850e-47 |
| Msa0257490 | Msa1256810 | 0.843028 | 1.802750e-58 | -8.615850e-47 |
| Msa0271360 | Msa1256810 | 0.818863 | 1.570055e-52 | -8.615850e-47 |
| Msa0274040 | Msa1256810 | -0.823360 | 1.444553e-53 | -8.615850e-47 |
| Msa0276430 | Msa1256810 | 0.802267 | 6.085364e-49 | -8.615850e-47 |
| Msa0278580 | Msa1256810 | 0.803136 | 4.026490e-49 | -8.615850e-47 |
| Msa0281530 | Msa1256810 | 0.815314 | 9.848128e-52 | -8.615850e-47 |
| Msa0295460 | Msa1256810 | -0.802535 | 5.358238e-49 | -8.615850e-47 |
| Msa0296620 | Msa1256810 | 0.811767 | 5.936906e-51 | -8.615850e-47 |
| Msa0296790 | Msa1256810 | 0.833043 | 6.690514e-56 | -8.615850e-47 |
| Msa0296820 | Msa1256810 | 0.854859 | 9.296007e-62 | -8.615850e-47 |
| Msa0309880 | Msa1256810 | 0.800948 | 1.133927e-48 | -8.615850e-47 |
| Msa0311510 | Msa1256810 | 0.817707 | 2.867675e-52 | -8.615850e-47 |
| Msa0317960 | Msa1256810 | 0.801583 | 8.407341e-49 | -8.615850e-47 |
| Msa0321690 | Msa1256810 | 0.809934 | 1.480230e-50 | -8.615850e-47 |
| Msa0331020 | Msa1256810 | 0.837213 | 5.936234e-57 | -8.615850e-47 |
| Msa0332190 | Msa1256810 | 0.838192 | 3.328472e-57 | -8.615850e-47 |
| Msa0332200 | Msa1256810 | 0.820276 | 7.472357e-53 | -8.615850e-47 |
| Msa1107200 | Msa1256810 | 0.824895 | 6.299386e-54 | -8.615850e-47 |
| Msa1109810 | Msa1256810 | 0.825209 | 5.310864e-54 | -8.615850e-47 |
| Msa1128270 | Msa1256810 | 0.810105 | 1.359691e-50 | -8.615850e-47 |
| Msa1133230 | Msa1256810 | 0.816789 | 4.613177e-52 | -8.615850e-47 |
| Msa1133250 | Msa1256810 | 0.808964 | 2.390464e-50 | -8.615850e-47 |
| Msa1150780 | Msa1256810 | 0.818086 | 2.354947e-52 | -8.615850e-47 |
| Msa1160740 | Msa1256810 | -0.802822 | 4.674888e-49 | -8.615850e-47 |
| Msa1180500 | Msa1256810 | 0.816854 | 4.462605e-52 | -8.615850e-47 |
| Msa1180720 | Msa1256810 | 0.812859 | 3.430148e-51 | -8.615850e-47 |
| Msa1183140 | Msa1256810 | 0.804612 | 1.986876e-49 | -8.615850e-47 |
| Msa1184690 | Msa1256810 | 0.802847 | 4.620281e-49 | -8.615850e-47 |
| Msa1206270 | Msa1256810 | 0.989001 | 2.774356e-176 | -8.615850e-47 |
| Msa1206290 | Msa1256810 | 0.958341 | 2.996786e-116 | -8.615850e-47 |
| Msa1221330 | Msa1256810 | 0.807803 | 4.228530e-50 | -8.615850e-47 |
| Msa0484630 | Msa1256810 | 0.836839 | 7.397422e-57 | -8.615850e-47 |
| Msa0484640 | Msa1256810 | 0.838383 | 2.971692e-57 | -8.615850e-47 |
| Msa0510840 | Msa1256810 | 0.815511 | 8.905287e-52 | -8.615850e-47 |
| Msa0519160 | Msa1256810 | 0.805034 | 1.621802e-49 | -8.615850e-47 |
| Msa0529000 | Msa1256810 | 0.812184 | 4.816662e-51 | -8.615850e-47 |
| Msa0534870 | Msa1256810 | 0.832790 | 7.731041e-56 | -8.615850e-47 |
| Msa0534900 | Msa1256810 | 0.825684 | 4.097909e-54 | -8.615850e-47 |
| Msa0542560 | Msa1256810 | 0.835529 | 1.591615e-56 | -8.615850e-47 |
| Msa0545050 | Msa1256810 | 0.817191 | 3.747587e-52 | -8.615850e-47 |
| Msa0588260 | Msa1256810 | 0.823954 | 1.048492e-53 | -8.615850e-47 |
| Msa0600590 | Msa1256810 | 0.836619 | 8.414947e-57 | -8.615850e-47 |
| Msa0855140 | Msa1256810 | 0.801408 | 9.134090e-49 | -8.615850e-47 |
| Msa0861570 | Msa1256810 | 0.804226 | 2.391111e-49 | -8.615850e-47 |
| Msa0933380 | Msa1256810 | 0.817172 | 3.785257e-52 | -8.615850e-47 |
| Msa0944610 | Msa1256810 | 0.821572 | 3.760665e-53 | -8.615850e-47 |
| Msa0944870 | Msa1256810 | 0.802168 | 6.375336e-49 | -8.615850e-47 |
| Msa0945130 | Msa1256810 | 0.816334 | 5.834756e-52 | -8.615850e-47 |
| Msa0969370 | Msa1256810 | 0.827529 | 1.487992e-54 | -8.615850e-47 |
| Msa0971160 | Msa1256810 | 0.808149 | 3.568339e-50 | -8.615850e-47 |
| Msa0972900 | Msa1256810 | 0.813980 | 1.944884e-51 | -8.615850e-47 |
| Msa0974950 | Msa1256810 | 0.813843 | 2.084193e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256810 | MtrunA17_Chr4g0055371 | 96.706 | 425 | 8 | 1 | 1 | 419 | 1 | 425 | 0.0 | 853 |
| Msa1256810 | MtrunA17_Chr7g0233351 | 56.637 | 452 | 148 | 8 | 5 | 417 | 2 | 444 | 2.23e-154 | 444 |
| Msa1256810 | MtrunA17_Chr8g0336161 | 68.340 | 259 | 81 | 1 | 162 | 419 | 193 | 451 | 1.97e-117 | 350 |
| Msa1256810 | MtrunA17_Chr3g0114791 | 51.786 | 336 | 130 | 6 | 86 | 412 | 109 | 421 | 1.11e-101 | 309 |
| Msa1256810 | MtrunA17_Chr5g0424111 | 53.079 | 341 | 113 | 7 | 101 | 412 | 111 | 433 | 3.66e-101 | 308 |
| Msa1256810 | MtrunA17_Chr8g0377671 | 37.500 | 200 | 102 | 2 | 163 | 339 | 17 | 216 | 6.30e-31 | 120 |
| Msa1256810 | MtrunA17_Chr8g0377671 | 33.168 | 202 | 112 | 1 | 164 | 342 | 41 | 242 | 3.37e-27 | 109 |
| Msa1256810 | MtrunA17_Chr8g0377671 | 37.654 | 162 | 101 | 0 | 162 | 323 | 108 | 269 | 2.96e-26 | 107 |
| Msa1256810 | MtrunA17_Chr8g0377671 | 35.227 | 176 | 114 | 0 | 166 | 341 | 89 | 264 | 6.44e-26 | 106 |
| Msa1256810 | MtrunA17_Chr8g0377671 | 32.824 | 131 | 88 | 0 | 212 | 342 | 20 | 150 | 4.11e-17 | 81.3 |
| Msa1256810 | MtrunA17_Chr8g0380791 | 35.955 | 178 | 114 | 0 | 165 | 342 | 12 | 189 | 2.08e-29 | 120 |
| Msa1256810 | MtrunA17_Chr8g0380791 | 35.036 | 137 | 89 | 0 | 206 | 342 | 7 | 143 | 1.97e-19 | 90.9 |
| Msa1256810 | MtrunA17_Chr8g0380791 | 36.364 | 143 | 83 | 2 | 142 | 279 | 56 | 195 | 8.76e-15 | 76.6 |
| Msa1256810 | MtrunA17_Chr8g0377191 | 36.264 | 182 | 116 | 0 | 163 | 344 | 9 | 190 | 2.67e-29 | 113 |
| Msa1256810 | MtrunA17_Chr8g0377191 | 29.714 | 175 | 121 | 1 | 141 | 313 | 31 | 205 | 2.02e-16 | 77.4 |
| Msa1256810 | MtrunA17_Chr8g0382971 | 30.081 | 246 | 157 | 3 | 111 | 341 | 1 | 246 | 7.80e-28 | 113 |
| Msa1256810 | MtrunA17_Chr8g0382971 | 33.333 | 177 | 113 | 2 | 162 | 336 | 113 | 286 | 1.10e-21 | 95.5 |
| Msa1256810 | MtrunA17_Chr8g0382971 | 29.457 | 129 | 91 | 0 | 214 | 342 | 27 | 155 | 6.57e-11 | 63.5 |
| Msa1256810 | MtrunA17_Chr4g0059911 | 33.333 | 210 | 116 | 2 | 156 | 341 | 22 | 231 | 2.80e-27 | 112 |
| Msa1256810 | MtrunA17_Chr4g0059911 | 34.270 | 178 | 116 | 1 | 166 | 342 | 9 | 186 | 1.48e-23 | 101 |
| Msa1256810 | MtrunA17_Chr4g0059911 | 31.148 | 183 | 123 | 1 | 154 | 333 | 90 | 272 | 2.30e-20 | 92.0 |
| Msa1256810 | MtrunA17_Chr1g0171491 | 33.702 | 181 | 120 | 0 | 163 | 343 | 58 | 238 | 3.01e-26 | 111 |
| Msa1256810 | MtrunA17_Chr1g0171491 | 32.609 | 184 | 121 | 1 | 164 | 347 | 82 | 262 | 3.18e-20 | 93.2 |
| Msa1256810 | MtrunA17_Chr3g0115111 | 35.838 | 173 | 110 | 1 | 167 | 338 | 58 | 230 | 1.89e-25 | 108 |
| Msa1256810 | MtrunA17_Chr3g0115111 | 37.931 | 116 | 72 | 0 | 227 | 342 | 73 | 188 | 2.45e-18 | 87.4 |
| Msa1256810 | MtrunA17_Chr8g0353121 | 27.668 | 253 | 165 | 3 | 163 | 397 | 50 | 302 | 4.93e-25 | 107 |
| Msa1256810 | MtrunA17_Chr8g0353121 | 35.862 | 145 | 92 | 1 | 199 | 342 | 39 | 183 | 2.54e-18 | 87.4 |
| Msa1256810 | MtrunA17_Chr8g0383331 | 37.838 | 148 | 92 | 0 | 165 | 312 | 3 | 150 | 9.30e-25 | 99.8 |
| Msa1256810 | MtrunA17_Chr8g0383331 | 37.302 | 126 | 79 | 0 | 210 | 335 | 2 | 127 | 2.70e-21 | 90.1 |
| Msa1256810 | MtrunA17_Chr8g0383331 | 38.095 | 105 | 65 | 0 | 237 | 341 | 6 | 110 | 3.31e-14 | 70.1 |
| Msa1256810 | MtrunA17_Chr8g0383331 | 34.167 | 120 | 70 | 1 | 155 | 265 | 30 | 149 | 1.06e-12 | 65.9 |
| Msa1256810 | MtrunA17_Chr3g0131001 | 37.209 | 172 | 108 | 0 | 167 | 338 | 56 | 227 | 1.00e-24 | 107 |
| Msa1256810 | MtrunA17_Chr3g0131001 | 34.109 | 129 | 85 | 0 | 165 | 293 | 100 | 228 | 2.94e-15 | 77.8 |
| Msa1256810 | MtrunA17_Chr3g0131001 | 36.719 | 128 | 81 | 0 | 214 | 341 | 57 | 184 | 1.98e-12 | 69.3 |
| Msa1256810 | MtrunA17_Chr5g0424301 | 35.928 | 167 | 107 | 0 | 163 | 329 | 66 | 232 | 1.05e-24 | 107 |
| Msa1256810 | MtrunA17_Chr5g0424301 | 36.719 | 128 | 81 | 0 | 214 | 341 | 71 | 198 | 4.33e-19 | 89.7 |
| Msa1256810 | MtrunA17_Chr5g0424301 | 33.019 | 106 | 71 | 0 | 237 | 342 | 71 | 176 | 3.59e-12 | 68.2 |
| Msa1256810 | MtrunA17_Chr3g0082501 | 33.514 | 185 | 119 | 1 | 163 | 347 | 61 | 241 | 3.96e-24 | 105 |
| Msa1256810 | MtrunA17_Chr3g0082501 | 29.605 | 152 | 98 | 1 | 159 | 301 | 94 | 245 | 1.54e-13 | 72.8 |
| Msa1256810 | MtrunA17_Chr7g0256301 | 32.370 | 173 | 117 | 0 | 163 | 335 | 68 | 240 | 5.27e-24 | 104 |
| Msa1256810 | MtrunA17_Chr8g0385241 | 29.707 | 239 | 132 | 4 | 140 | 342 | 28 | 266 | 2.95e-22 | 98.2 |
| Msa1256810 | MtrunA17_Chr8g0385241 | 33.163 | 196 | 113 | 4 | 165 | 345 | 124 | 316 | 3.31e-22 | 98.2 |
| Msa1256810 | MtrunA17_Chr8g0385241 | 31.383 | 188 | 119 | 1 | 163 | 340 | 7 | 194 | 4.14e-20 | 92.0 |
| Msa1256810 | MtrunA17_Chr8g0385241 | 34.706 | 170 | 108 | 2 | 162 | 328 | 177 | 346 | 4.46e-20 | 91.7 |
| Msa1256810 | MtrunA17_Chr8g0385201 | 35.185 | 162 | 104 | 1 | 166 | 326 | 30 | 191 | 1.49e-21 | 97.1 |
| Msa1256810 | MtrunA17_Chr8g0385201 | 39.130 | 115 | 70 | 0 | 227 | 341 | 46 | 160 | 1.91e-17 | 84.7 |
| Msa1256810 | MtrunA17_Chr1g0180261 | 29.439 | 214 | 143 | 2 | 153 | 358 | 61 | 274 | 3.44e-21 | 96.3 |
| Msa1256810 | MtrunA17_Chr1g0180261 | 31.818 | 176 | 120 | 0 | 167 | 342 | 52 | 227 | 2.26e-20 | 94.0 |
| Msa1256810 | MtrunA17_Chr1g0180261 | 29.592 | 196 | 131 | 3 | 153 | 341 | 8 | 203 | 2.87e-18 | 87.4 |
| Msa1256810 | MtrunA17_Chr2g0316611 | 35.088 | 171 | 111 | 0 | 164 | 334 | 126 | 296 | 4.01e-21 | 94.4 |
| Msa1256810 | MtrunA17_Chr2g0316611 | 33.333 | 195 | 124 | 3 | 163 | 356 | 33 | 222 | 1.06e-17 | 84.3 |
| Msa1256810 | MtrunA17_Chr2g0316611 | 32.086 | 187 | 104 | 1 | 166 | 329 | 174 | 360 | 4.55e-16 | 79.3 |
| Msa1256810 | MtrunA17_Chr8g0377211 | 40.336 | 119 | 71 | 0 | 205 | 323 | 35 | 153 | 3.28e-20 | 87.4 |
| Msa1256810 | MtrunA17_Chr8g0377211 | 34.959 | 123 | 80 | 0 | 217 | 339 | 24 | 146 | 1.97e-16 | 76.6 |
| Msa1256810 | MtrunA17_Chr6g0467061 | 32.804 | 189 | 104 | 1 | 166 | 331 | 88 | 276 | 4.65e-19 | 87.8 |
| Msa1256810 | MtrunA17_Chr6g0467061 | 35.227 | 176 | 112 | 2 | 162 | 336 | 15 | 189 | 1.52e-18 | 86.3 |
| Msa1256810 | MtrunA17_Chr6g0467061 | 36.306 | 157 | 100 | 0 | 164 | 320 | 178 | 334 | 6.21e-18 | 84.3 |
| Msa1256810 | MtrunA17_Chr6g0467061 | 34.074 | 135 | 89 | 0 | 206 | 340 | 13 | 147 | 1.01e-15 | 77.8 |
| Msa1256810 | MtrunA17_Chr2g0316631 | 30.729 | 192 | 110 | 1 | 163 | 331 | 33 | 224 | 8.62e-19 | 86.7 |
| Msa1256810 | MtrunA17_Chr2g0316631 | 32.386 | 176 | 119 | 0 | 166 | 341 | 105 | 280 | 2.03e-17 | 82.4 |
| Msa1256810 | MtrunA17_Chr2g0316631 | 32.143 | 168 | 114 | 0 | 164 | 331 | 126 | 293 | 4.54e-17 | 81.6 |
| Msa1256810 | MtrunA17_Chr8g0383551 | 28.509 | 228 | 120 | 7 | 165 | 358 | 50 | 268 | 8.25e-16 | 78.6 |
| Msa1256810 | MtrunA17_Chr8g0383551 | 30.464 | 151 | 73 | 3 | 143 | 267 | 125 | 269 | 6.18e-11 | 63.5 |
| Msa1256810 | MtrunA17_Chr8g0377221 | 24.031 | 258 | 130 | 6 | 164 | 365 | 3 | 250 | 6.09e-13 | 68.9 |
| Msa1256810 | MtrunA17_Chr8g0377221 | 27.234 | 235 | 124 | 8 | 115 | 319 | 2 | 219 | 6.09e-11 | 62.8 |
| Msa1256810 | MtrunA17_Chr5g0398011 | 35.780 | 109 | 70 | 0 | 214 | 322 | 37 | 145 | 2.61e-12 | 64.3 |
| Msa1256810 | MtrunA17_Chr1g0210831 | 29.787 | 141 | 99 | 0 | 208 | 348 | 609 | 749 | 1.98e-11 | 65.9 |
| Msa1256810 | MtrunA17_Chr5g0398021 | 34.314 | 102 | 67 | 0 | 166 | 267 | 13 | 114 | 8.57e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256810 | AT4G17080.1 | 57.398 | 392 | 129 | 5 | 42 | 410 | 125 | 501 | 2.08e-141 | 414 |
| Msa1256810 | AT2G35170.1 | 58.235 | 340 | 119 | 6 | 70 | 386 | 107 | 446 | 4.41e-131 | 386 |
| Msa1256810 | AT1G21920.1 | 54.180 | 323 | 132 | 3 | 96 | 412 | 98 | 410 | 9.10e-102 | 309 |
| Msa1256810 | AT1G21920.2 | 57.540 | 252 | 101 | 2 | 96 | 341 | 98 | 349 | 1.39e-98 | 299 |
| Msa1256810 | AT1G77660.1 | 54.180 | 323 | 129 | 6 | 99 | 412 | 102 | 414 | 4.01e-96 | 295 |
| Msa1256810 | AT1G21980.1 | 37.059 | 170 | 107 | 0 | 167 | 336 | 77 | 246 | 3.06e-28 | 117 |
| Msa1256810 | AT1G21980.1 | 37.500 | 128 | 80 | 0 | 214 | 341 | 78 | 205 | 2.79e-19 | 90.9 |
| Msa1256810 | AT1G21980.1 | 30.370 | 135 | 93 | 1 | 165 | 298 | 121 | 255 | 6.49e-12 | 68.2 |
| Msa1256810 | AT2G41210.1 | 36.207 | 174 | 111 | 0 | 163 | 336 | 67 | 240 | 1.38e-27 | 115 |
| Msa1256810 | AT2G41210.1 | 38.281 | 128 | 79 | 0 | 214 | 341 | 72 | 199 | 1.87e-20 | 94.4 |
| Msa1256810 | AT1G77740.2 | 35.882 | 170 | 109 | 0 | 167 | 336 | 78 | 247 | 6.50e-27 | 114 |
| Msa1256810 | AT1G77740.2 | 36.719 | 128 | 81 | 0 | 214 | 341 | 79 | 206 | 7.75e-18 | 86.3 |
| Msa1256810 | AT1G77740.2 | 33.962 | 106 | 70 | 0 | 237 | 342 | 79 | 184 | 2.99e-11 | 65.9 |
| Msa1256810 | AT1G77740.1 | 35.882 | 170 | 109 | 0 | 167 | 336 | 78 | 247 | 6.50e-27 | 114 |
| Msa1256810 | AT1G77740.1 | 36.719 | 128 | 81 | 0 | 214 | 341 | 79 | 206 | 7.75e-18 | 86.3 |
| Msa1256810 | AT1G77740.1 | 33.962 | 106 | 70 | 0 | 237 | 342 | 79 | 184 | 2.99e-11 | 65.9 |
| Msa1256810 | AT3G56960.2 | 32.955 | 176 | 118 | 0 | 163 | 338 | 69 | 244 | 1.11e-26 | 113 |
| Msa1256810 | AT3G56960.2 | 36.719 | 128 | 81 | 0 | 214 | 341 | 74 | 201 | 7.82e-20 | 92.4 |
| Msa1256810 | AT3G56960.1 | 32.955 | 176 | 118 | 0 | 163 | 338 | 69 | 244 | 1.11e-26 | 113 |
| Msa1256810 | AT3G56960.1 | 36.719 | 128 | 81 | 0 | 214 | 341 | 74 | 201 | 7.82e-20 | 92.4 |
| Msa1256810 | AT1G60890.1 | 34.270 | 178 | 94 | 1 | 163 | 340 | 8 | 162 | 3.47e-25 | 108 |
| Msa1256810 | AT1G60890.1 | 34.118 | 170 | 112 | 0 | 155 | 324 | 23 | 192 | 1.85e-24 | 106 |
| Msa1256810 | AT1G60890.1 | 34.513 | 113 | 74 | 0 | 167 | 279 | 81 | 193 | 1.27e-12 | 70.1 |
| Msa1256810 | AT1G60890.2 | 34.270 | 178 | 94 | 1 | 163 | 340 | 20 | 174 | 4.14e-25 | 108 |
| Msa1256810 | AT1G60890.2 | 34.118 | 170 | 112 | 0 | 155 | 324 | 35 | 204 | 2.20e-24 | 106 |
| Msa1256810 | AT1G60890.2 | 34.513 | 113 | 74 | 0 | 167 | 279 | 93 | 205 | 1.45e-12 | 70.1 |
| Msa1256810 | AT2G26420.2 | 34.392 | 189 | 120 | 2 | 163 | 351 | 50 | 234 | 5.47e-25 | 108 |
| Msa1256810 | AT2G26420.3 | 34.392 | 189 | 120 | 2 | 163 | 351 | 50 | 234 | 5.47e-25 | 108 |
| Msa1256810 | AT2G26420.1 | 34.392 | 189 | 120 | 2 | 163 | 351 | 50 | 234 | 6.96e-25 | 107 |
| Msa1256810 | AT1G10900.2 | 35.404 | 161 | 104 | 0 | 164 | 324 | 32 | 192 | 3.22e-24 | 105 |
| Msa1256810 | AT1G10900.2 | 34.831 | 178 | 116 | 0 | 165 | 342 | 10 | 187 | 8.21e-24 | 104 |
| Msa1256810 | AT1G10900.2 | 30.769 | 156 | 85 | 1 | 207 | 339 | 6 | 161 | 1.53e-15 | 79.3 |
| Msa1256810 | AT1G10900.2 | 32.639 | 144 | 89 | 2 | 141 | 279 | 53 | 193 | 3.86e-12 | 68.6 |
| Msa1256810 | AT1G10900.1 | 35.404 | 161 | 104 | 0 | 164 | 324 | 32 | 192 | 3.22e-24 | 105 |
| Msa1256810 | AT1G10900.1 | 34.831 | 178 | 116 | 0 | 165 | 342 | 10 | 187 | 8.21e-24 | 104 |
| Msa1256810 | AT1G10900.1 | 30.769 | 156 | 85 | 1 | 207 | 339 | 6 | 161 | 1.53e-15 | 79.3 |
| Msa1256810 | AT1G10900.1 | 32.639 | 144 | 89 | 2 | 141 | 279 | 53 | 193 | 3.86e-12 | 68.6 |
| Msa1256810 | AT1G10900.3 | 35.404 | 161 | 104 | 0 | 164 | 324 | 32 | 192 | 3.22e-24 | 105 |
| Msa1256810 | AT1G10900.3 | 34.831 | 178 | 116 | 0 | 165 | 342 | 10 | 187 | 8.21e-24 | 104 |
| Msa1256810 | AT1G10900.3 | 30.769 | 156 | 85 | 1 | 207 | 339 | 6 | 161 | 1.53e-15 | 79.3 |
| Msa1256810 | AT1G10900.3 | 32.639 | 144 | 89 | 2 | 141 | 279 | 53 | 193 | 3.86e-12 | 68.6 |
| Msa1256810 | AT3G07960.3 | 32.258 | 186 | 122 | 1 | 163 | 348 | 24 | 205 | 6.70e-24 | 104 |
| Msa1256810 | AT3G07960.1 | 32.258 | 186 | 122 | 1 | 163 | 348 | 24 | 205 | 6.81e-24 | 104 |
| Msa1256810 | AT3G07960.2 | 32.258 | 186 | 122 | 1 | 163 | 348 | 24 | 205 | 7.25e-24 | 104 |
| Msa1256810 | AT3G07960.4 | 32.258 | 186 | 122 | 1 | 163 | 348 | 24 | 205 | 7.25e-24 | 104 |
| Msa1256810 | AT3G09920.3 | 27.413 | 259 | 167 | 2 | 148 | 394 | 23 | 272 | 7.74e-22 | 98.6 |
| Msa1256810 | AT3G09920.3 | 29.808 | 208 | 134 | 3 | 164 | 362 | 74 | 278 | 4.09e-21 | 96.7 |
| Msa1256810 | AT3G09920.4 | 27.413 | 259 | 167 | 2 | 148 | 394 | 23 | 272 | 7.74e-22 | 98.6 |
| Msa1256810 | AT3G09920.4 | 29.808 | 208 | 134 | 3 | 164 | 362 | 74 | 278 | 4.09e-21 | 96.7 |
| Msa1256810 | AT3G09920.2 | 27.413 | 259 | 167 | 2 | 148 | 394 | 23 | 272 | 7.74e-22 | 98.6 |
| Msa1256810 | AT3G09920.2 | 29.808 | 208 | 134 | 3 | 164 | 362 | 74 | 278 | 4.09e-21 | 96.7 |
| Msa1256810 | AT3G09920.1 | 27.413 | 259 | 167 | 2 | 148 | 394 | 23 | 272 | 7.74e-22 | 98.6 |
| Msa1256810 | AT3G09920.1 | 29.808 | 208 | 134 | 3 | 164 | 362 | 74 | 278 | 4.09e-21 | 96.7 |
Find 126 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAGATCTAATTTGATTT+TGG | 0.159266 | 8_2:+57073080 | Msa1256810:three_prime_UTR |
| GATTAGGACGGTACCATTTC+AGG | 0.220617 | 8_2:+57070662 | Msa1256810:CDS |
| TAGATAGATAGTAATGAAAA+TGG | 0.282541 | 8_2:-57069809 | None:intergenic |
| TAATGAAAATGGAACTAGTT+TGG | 0.298849 | 8_2:-57069798 | None:intergenic |
| CTTGAAAGATTGAAACTTTG+AGG | 0.305718 | 8_2:-57070053 | None:intergenic |
| AGAGCTTAAATTCTGGATCT+TGG | 0.306677 | 8_2:+57070302 | Msa1256810:CDS |
| TGAACATATTAGCGTATCTT+TGG | 0.306735 | 8_2:+57073378 | Msa1256810:three_prime_UTR |
| ATAGCAGTGAGGTTCCTATT+TGG | 0.308458 | 8_2:+57073163 | Msa1256810:three_prime_UTR |
| CAACGTGTTGTATGGTCAAT+TGG | 0.311671 | 8_2:+57070259 | Msa1256810:CDS |
| TTTGAAGGTGATTGGATTGA+TGG | 0.327944 | 8_2:+57070421 | Msa1256810:CDS |
| GTGTTTCTATTTCTCTGTAT+TGG | 0.335429 | 8_2:+57073139 | Msa1256810:three_prime_UTR |
| AACAAATCTGATTCTGAAAT+CGG | 0.341623 | 8_2:+57069860 | Msa1256810:CDS |
| AAAATTACCAAAGTTAGTAT+AGG | 0.344775 | 8_2:+57073332 | Msa1256810:three_prime_UTR |
| AAATTACCAAAGTTAGTATA+GGG | 0.344865 | 8_2:+57073333 | Msa1256810:three_prime_UTR |
| TACGCTAATATGTTCATAAC+AGG | 0.351449 | 8_2:-57073371 | None:intergenic |
| TTTGGTGGTGATGTTTATAC+TGG | 0.359699 | 8_2:+57070544 | Msa1256810:CDS |
| GAGAAAGTAAAGAGAGGTTA+AGG | 0.372259 | 8_2:-57070110 | None:intergenic |
| GAGCTTAAATTCTGGATCTT+GGG | 0.376585 | 8_2:+57070303 | Msa1256810:CDS |
| CATATGAGTGGAAGATTTGA+AGG | 0.378466 | 8_2:+57070406 | Msa1256810:CDS |
| AAGGGTTTGAGGCATGGAAT+TGG | 0.379850 | 8_2:+57070508 | Msa1256810:CDS |
| GATTGAAACTTTGAGGTAAA+GGG | 0.380834 | 8_2:-57070046 | None:intergenic |
| TTTCATAAGGGGAAGTGCTC+AGG | 0.382882 | 8_2:+57070364 | Msa1256810:CDS |
| ATTATGTTGGGGAATTCAAA+TGG | 0.385157 | 8_2:+57070626 | Msa1256810:CDS |
| TTTCAGAATCAGATTTGTTA+AGG | 0.386777 | 8_2:-57069856 | None:intergenic |
| TCAACGATCTTGAGAAGAAT+AGG | 0.388984 | 8_2:-57070204 | None:intergenic |
| GTGGAAGATTTGAAGGTGAT+TGG | 0.394569 | 8_2:+57070413 | Msa1256810:CDS |
| TGGGGTGTTAAACATGGATT+AGG | 0.409371 | 8_2:+57070646 | Msa1256810:CDS |
| GGCATGGAATTGGAATTTAT+AGG | 0.412594 | 8_2:+57070518 | Msa1256810:CDS |
| GGAGTTCATACTTGCAATGA+TGG | 0.416556 | 8_2:+57070598 | Msa1256810:CDS |
| AAAAGCAAGACAGTCATATT+GGG | 0.421127 | 8_2:+57072072 | Msa1256810:CDS |
| AATGGTCAGTGTCATGGCTT+TGG | 0.421143 | 8_2:+57070577 | Msa1256810:CDS |
| GAAGAGTGCAGCTTTCTCAT+AGG | 0.423749 | 8_2:+57072976 | Msa1256810:three_prime_UTR |
| TATGAAGGTGAGTTTCATAA+GGG | 0.426937 | 8_2:+57070352 | Msa1256810:CDS |
| GAGTTAAAGAGCTTAAATTC+TGG | 0.427388 | 8_2:+57070295 | Msa1256810:CDS |
| TGGCAGATTGTGGAGCAAAT+AGG | 0.428417 | 8_2:+57073211 | Msa1256810:three_prime_UTR |
| GCGGATATGATGCATGGCTT+TGG | 0.433142 | 8_2:+57071912 | Msa1256810:CDS |
| TTGTTTGATTCATATAAAAC+CGG | 0.433533 | 8_2:-57069692 | None:intergenic |
| TGCTTGAGAAGCGTTGTTCA+TGG | 0.439654 | 8_2:-57069952 | None:intergenic |
| TTATGAAGGTGAGTTTCATA+AGG | 0.441190 | 8_2:+57070351 | Msa1256810:CDS |
| AGTGTGGTCACTGGCAGAAT+GGG | 0.442429 | 8_2:+57072033 | Msa1256810:CDS |
| CATGCCACGCACCCTCATAT+CGG | 0.449588 | 8_2:-57071959 | None:intergenic |
| TCAGAATGGTCACCGATATG+AGG | 0.450366 | 8_2:+57071947 | Msa1256810:CDS |
| TGTAAACCCTATACTAACTT+TGG | 0.451609 | 8_2:-57073339 | None:intergenic |
| CTCATCATCAACGTGTTGTA+TGG | 0.452247 | 8_2:+57070251 | Msa1256810:CDS |
| AGATTGAAACTTTGAGGTAA+AGG | 0.454037 | 8_2:-57070047 | None:intergenic |
| TTGGTGAAAATACAAGTGTT+TGG | 0.457713 | 8_2:+57073442 | Msa1256810:three_prime_UTR |
| TATAAGAATCATAGAAATGC+AGG | 0.458537 | 8_2:+57073051 | Msa1256810:three_prime_UTR |
| GATGGAAAGTATGATGGGTT+TGG | 0.464094 | 8_2:+57070439 | Msa1256810:CDS |
| GAATAATAAGCTTTCTTCAT+CGG | 0.464931 | 8_2:+57070225 | Msa1256810:CDS |
| GTAGGTATCGTGGACAGTAT+AGG | 0.468147 | 8_2:+57070485 | Msa1256810:CDS |
| TTATGTTGGGGAATTCAAAT+GGG | 0.469276 | 8_2:+57070627 | Msa1256810:CDS |
| CAGTGTGGTCACTGGCAGAA+TGG | 0.474325 | 8_2:+57072032 | Msa1256810:CDS |
| TTAGTATAGGGTTTACATGC+TGG | 0.477962 | 8_2:+57073345 | Msa1256810:three_prime_UTR |
| AAGAGAAAATCAAGAAGAGT+TGG | 0.478692 | 8_2:-57070142 | None:intergenic |
| AACAAACAGTTTCTAAGCTC+CGG | 0.482162 | 8_2:+57069673 | Msa1256810:five_prime_UTR |
| ATAGAATTGATTATGCCTCT+TGG | 0.482251 | 8_2:+57073423 | Msa1256810:three_prime_UTR |
| GTAAAGGGTATTGTAAAAGA+AGG | 0.483157 | 8_2:-57070031 | None:intergenic |
| TGGATTGATGGAAAGTATGA+TGG | 0.494170 | 8_2:+57070433 | Msa1256810:CDS |
| ATGATGGGAGTCATTATGTT+GGG | 0.495925 | 8_2:+57070614 | Msa1256810:CDS |
| AATGTCAAAGAAGGATGAAC+TGG | 0.498099 | 8_2:+57072795 | Msa1256810:CDS |
| TGAAGGAAGAAGACAAGGAC+TGG | 0.499777 | 8_2:+57071980 | Msa1256810:CDS |
| CTGGACAGCTTTGAAAACCT+TGG | 0.499930 | 8_2:-57072117 | None:intergenic |
| GGTGTATGAGATGGTGAAGA+TGG | 0.507475 | 8_2:-57069980 | None:intergenic |
| GGAGTCTATCAATTTCAGAA+TGG | 0.507486 | 8_2:+57071933 | Msa1256810:CDS |
| GAAAATGATGAGGAGTAACT+TGG | 0.509080 | 8_2:-57069928 | None:intergenic |
| AACGTGTTGTATGGTCAATT+GGG | 0.513400 | 8_2:+57070260 | Msa1256810:CDS |
| TTCAAATGGGGTGTTAAACA+TGG | 0.513973 | 8_2:+57070640 | Msa1256810:CDS |
| ATCACACGATAGACGAAATG+AGG | 0.525873 | 8_2:-57072927 | None:intergenic |
| TGGGTTCAAGTTTACAGCAA+TGG | 0.526362 | 8_2:+57070322 | Msa1256810:CDS |
| GTCAATTGGGTCAAAGGATG+AGG | 0.530313 | 8_2:+57070273 | Msa1256810:CDS |
| CATATCCGCAAAATATTCTC+CGG | 0.537617 | 8_2:-57071898 | None:intergenic |
| TTATTTATGATTATGAACAT+AGG | 0.540687 | 8_2:+57073252 | Msa1256810:three_prime_UTR |
| TATAGGAAGGGTTTGAGGCA+TGG | 0.542708 | 8_2:+57070502 | Msa1256810:CDS |
| TATGAGGGTGCGTGGCATGA+AGG | 0.544188 | 8_2:+57071963 | Msa1256810:CDS |
| TTATGAACATAGGAAGAGTA+AGG | 0.549370 | 8_2:+57073262 | Msa1256810:three_prime_UTR |
| GTGATGTTTATACTGGTGAA+TGG | 0.551261 | 8_2:+57070551 | Msa1256810:CDS |
| GACAGTATAGGAAGGGTTTG+AGG | 0.555234 | 8_2:+57070497 | Msa1256810:CDS |
| GGGAAACACAGTGTGGTCAC+TGG | 0.556623 | 8_2:+57072024 | Msa1256810:CDS |
| TGAAAAGAGAAAGTAAAGAG+AGG | 0.558903 | 8_2:-57070116 | None:intergenic |
| ATCCTTCTTTGACATTCCGT+AGG | 0.560605 | 8_2:-57072788 | None:intergenic |
| ATCATTGAACATTGTAATCA+CGG | 0.560703 | 8_2:-57072900 | None:intergenic |
| AAGGGGAAGTGCTCAGGGAG+TGG | 0.561581 | 8_2:+57070370 | Msa1256810:CDS |
| GAGTTCATACTTGCAATGAT+GGG | 0.567190 | 8_2:+57070599 | Msa1256810:CDS |
| TTGAACTCTATGGCAGATTG+TGG | 0.569242 | 8_2:+57073201 | Msa1256810:three_prime_UTR |
| AGCTAGAGTTGCAGCTGTGA+AGG | 0.569793 | 8_2:+57072858 | Msa1256810:CDS |
| TTCATAAGGGGAAGTGCTCA+GGG | 0.572490 | 8_2:+57070365 | Msa1256810:CDS |
| TATACTGGTGAATGGTGTAA+TGG | 0.573863 | 8_2:+57070559 | Msa1256810:CDS |
| AGCAATGGTGATGTTTATGA+AGG | 0.574309 | 8_2:+57070337 | Msa1256810:CDS |
| CAGAATGGTCACCGATATGA+GGG | 0.575287 | 8_2:+57071948 | Msa1256810:CDS |
| CAGCTTTGAAAACCTTGGCA+TGG | 0.579822 | 8_2:-57072112 | None:intergenic |
| AGCCTACGGAATGTCAAAGA+AGG | 0.581674 | 8_2:+57072786 | Msa1256810:CDS |
| GGATTGATGGAAAGTATGAT+GGG | 0.582051 | 8_2:+57070434 | Msa1256810:CDS |
| ATGGGTTTGGTGTTGAAACG+TGG | 0.586936 | 8_2:+57070452 | Msa1256810:CDS |
| GGTGTTGAAACGTGGGCTAG+AGG | 0.588676 | 8_2:+57070460 | Msa1256810:CDS |
| TTGTGTGTAGGTGTATGAGA+TGG | 0.591599 | 8_2:-57069989 | None:intergenic |
| TGTATGGTCAATTGGGTCAA+AGG | 0.595542 | 8_2:+57070267 | Msa1256810:CDS |
| CCTTGTTCTCATCCTCACTT+CGG | 0.596551 | 8_2:+57073114 | Msa1256810:three_prime_UTR |
| AGAAATGGGGACATATATGC+CGG | 0.598656 | 8_2:+57071879 | Msa1256810:intron |
| AAACGTGGGCTAGAGGAAGT+AGG | 0.599270 | 8_2:+57070467 | Msa1256810:CDS |
| TGGTGTAATGGTCAGTGTCA+TGG | 0.600058 | 8_2:+57070571 | Msa1256810:CDS |
| GAAGGAAGAAGACAAGGACT+GGG | 0.603856 | 8_2:+57071981 | Msa1256810:CDS |
| CCGAAGTGAGGATGAGAACA+AGG | 0.609666 | 8_2:-57073114 | None:intergenic |
| GTATCGTGGACAGTATAGGA+AGG | 0.617143 | 8_2:+57070489 | Msa1256810:CDS |
| TGAACAGGATGCTCATTGTG+CGG | 0.617594 | 8_2:+57072756 | Msa1256810:intron |
| TCTGTATTGGTATAGCAGTG+AGG | 0.626255 | 8_2:+57073152 | Msa1256810:three_prime_UTR |
| TGTTCTCATCCTCACTTCGG+AGG | 0.628048 | 8_2:+57073117 | Msa1256810:three_prime_UTR |
| TTGAGTTGCAATGTGTATTG+TGG | 0.629435 | 8_2:+57073296 | Msa1256810:three_prime_UTR |
| GTCACCGATATGAGGGTGCG+TGG | 0.630941 | 8_2:+57071955 | Msa1256810:CDS |
| AATGATGGGAGTCATTATGT+TGG | 0.635184 | 8_2:+57070613 | Msa1256810:CDS |
| TTGTTATTACTGCAGAAATG+GGG | 0.635687 | 8_2:+57071866 | Msa1256810:intron |
| TGATGGGAGTCATTATGTTG+GGG | 0.636425 | 8_2:+57070615 | Msa1256810:CDS |
| TGTGCGGCGGAGAAAGCCTA+CGG | 0.641747 | 8_2:+57072772 | Msa1256810:CDS |
| TTGGCATGGTCTACAGCACA+TGG | 0.645980 | 8_2:-57072098 | None:intergenic |
| ATGTGCTGTAGACCATGCCA+AGG | 0.647382 | 8_2:+57072100 | Msa1256810:CDS |
| TATCGTGGACAGTATAGGAA+GGG | 0.648017 | 8_2:+57070490 | Msa1256810:CDS |
| ATAGAAACACCTCCGAAGTG+AGG | 0.650853 | 8_2:-57073126 | None:intergenic |
| TCACACGATAGACGAAATGA+GGG | 0.656444 | 8_2:-57072926 | None:intergenic |
| TATGTTGGGGAATTCAAATG+GGG | 0.656507 | 8_2:+57070628 | Msa1256810:CDS |
| TGGCATGAAGGAAGAAGACA+AGG | 0.660942 | 8_2:+57071975 | Msa1256810:CDS |
| TGGGTTTGGTGTTGAAACGT+GGG | 0.670518 | 8_2:+57070453 | Msa1256810:CDS |
| ATGAAGGTGAGTTTCATAAG+GGG | 0.671828 | 8_2:+57070353 | Msa1256810:CDS |
| GCTAGAGGAAGTAGGTATCG+TGG | 0.672052 | 8_2:+57070475 | Msa1256810:CDS |
| GTGTTAAACATGGATTAGGA+CGG | 0.683306 | 8_2:+57070650 | Msa1256810:CDS |
| ACAGGATGCTCATTGTGCGG+CGG | 0.690381 | 8_2:+57072759 | Msa1256810:intron |
| TGTTCATGGTGAAAATGATG+AGG | 0.704077 | 8_2:-57069938 | None:intergenic |
| AGAAACGGGGAAACACAGTG+TGG | 0.759758 | 8_2:+57072017 | Msa1256810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGAGAATTTACTTTTATT+TGG | + | chr8_2:57070987-57071006 | Msa1256810:intron | 15.0% |
| !!! | AAGAGAATTTACTTTTATTT+GGG | + | chr8_2:57070988-57071007 | Msa1256810:intron | 15.0% |
| !!! | CAAAGCTTTATATAAAAAAT+GGG | - | chr8_2:57071167-57071186 | None:intergenic | 15.0% |
| !! | TTATTTATGATTATGAACAT+AGG | + | chr8_2:57073252-57073271 | Msa1256810:three_prime_UTR | 15.0% |
| !!! | GTTTGTTTTAGTGTATAATT+TGG | - | chr8_2:57069656-57069675 | None:intergenic | 20.0% |
| !! | TTGTTTGATTCATATAAAAC+CGG | - | chr8_2:57069695-57069714 | None:intergenic | 20.0% |
| !! | TAGATAGATAGTAATGAAAA+TGG | - | chr8_2:57069812-57069831 | None:intergenic | 20.0% |
| !!! | ATTGGAATTTATAGGTTTTT+TGG | + | chr8_2:57070526-57070545 | Msa1256810:CDS | 20.0% |
| !!! | AGTTCAAAATTGTATTTTAG+TGG | - | chr8_2:57070818-57070837 | None:intergenic | 20.0% |
| !! | CTTAAAATGAACACAAAATT+GGG | - | chr8_2:57070971-57070990 | None:intergenic | 20.0% |
| !! | TCTTAAAATGAACACAAAAT+TGG | - | chr8_2:57070972-57070991 | None:intergenic | 20.0% |
| !!! | CCAAAGCTTTATATAAAAAA+TGG | - | chr8_2:57071168-57071187 | None:intergenic | 20.0% |
| !!! | CCATTTTTTATATAAAGCTT+TGG | + | chr8_2:57071165-57071184 | Msa1256810:intron | 20.0% |
| !! | AATACAGATAAAAATCAAAC+TGG | - | chr8_2:57071572-57071591 | None:intergenic | 20.0% |
| !! | TGTCAATCAAATTGAATAAT+GGG | - | chr8_2:57071746-57071765 | None:intergenic | 20.0% |
| !! | ATGTCAATCAAATTGAATAA+TGG | - | chr8_2:57071747-57071766 | None:intergenic | 20.0% |
| !!! | CATGATTATATATTGTTTTG+TGG | + | chr8_2:57072263-57072282 | Msa1256810:intron | 20.0% |
| !! | AGTAAAAAATGATGAAATCA+GGG | - | chr8_2:57072373-57072392 | None:intergenic | 20.0% |
| !! | AAGTAAAAAATGATGAAATC+AGG | - | chr8_2:57072374-57072393 | None:intergenic | 20.0% |
| !!! | ATCATTTTTTACTTTCTACT+TGG | + | chr8_2:57072380-57072399 | Msa1256810:intron | 20.0% |
| !!! | TCATTTTTTACTTTCTACTT+GGG | + | chr8_2:57072381-57072400 | Msa1256810:intron | 20.0% |
| !! | CATAGTTATTACTTATTGTT+TGG | - | chr8_2:57072705-57072724 | None:intergenic | 20.0% |
| !!! | AATGAGATCTAATTTGATTT+TGG | + | chr8_2:57073080-57073099 | Msa1256810:three_prime_UTR | 20.0% |
| !!! | ACTAACTTTGGTAATTTTTT+TGG | - | chr8_2:57073330-57073349 | None:intergenic | 20.0% |
| !! | AAAATTACCAAAGTTAGTAT+AGG | + | chr8_2:57073332-57073351 | Msa1256810:three_prime_UTR | 20.0% |
| !! | AAATTACCAAAGTTAGTATA+GGG | + | chr8_2:57073333-57073352 | Msa1256810:three_prime_UTR | 20.0% |
| ! | TAATGAAAATGGAACTAGTT+TGG | - | chr8_2:57069801-57069820 | None:intergenic | 25.0% |
| !!! | TTTCAGAATCAGATTTGTTA+AGG | - | chr8_2:57069859-57069878 | None:intergenic | 25.0% |
| !!! | AACAAATCTGATTCTGAAAT+CGG | + | chr8_2:57069860-57069879 | Msa1256810:CDS | 25.0% |
| ! | GATTGAAAAATGAGTGAAAT+CGG | - | chr8_2:57069909-57069928 | None:intergenic | 25.0% |
| !!! | AAAAGAAGGTTTGTTTTGAT+GGG | - | chr8_2:57070020-57070039 | None:intergenic | 25.0% |
| !!! | TAAAAGAAGGTTTGTTTTGA+TGG | - | chr8_2:57070021-57070040 | None:intergenic | 25.0% |
| ! | GAATAATAAGCTTTCTTCAT+CGG | + | chr8_2:57070225-57070244 | Msa1256810:CDS | 25.0% |
| !! | GTTTATCATTTTCATATGAG+TGG | + | chr8_2:57070394-57070413 | Msa1256810:CDS | 25.0% |
| ! | AAAAAAGAACTAACCTGAAA+TGG | - | chr8_2:57070678-57070697 | None:intergenic | 25.0% |
| !! | AGATTTGACATTATCTGTTT+TGG | + | chr8_2:57070843-57070862 | Msa1256810:intron | 25.0% |
| !!! | GATATTTATTTAGCTTTGGT+AGG | + | chr8_2:57071283-57071302 | Msa1256810:intron | 25.0% |
| ! | ATTTACTTTCAAAAGCCAAA+AGG | + | chr8_2:57071412-57071431 | Msa1256810:intron | 25.0% |
| ! | TGTATGTGTTTCTTCTAAAT+AGG | + | chr8_2:57071508-57071527 | Msa1256810:intron | 25.0% |
| ! | TTGTATCTAGCTAAAATACT+TGG | + | chr8_2:57071597-57071616 | Msa1256810:intron | 25.0% |
| ! | TAAAATACTTGGAAAGTGAT+TGG | + | chr8_2:57071608-57071627 | Msa1256810:intron | 25.0% |
| ! | CTAGCAATGTATAATGTAAT+TGG | + | chr8_2:57071769-57071788 | Msa1256810:intron | 25.0% |
| !!! | ATTTGTTATTACTGCAGAAA+TGG | + | chr8_2:57071864-57071883 | Msa1256810:intron | 25.0% |
| !!! | TTTGTTATTACTGCAGAAAT+GGG | + | chr8_2:57071865-57071884 | Msa1256810:intron | 25.0% |
| ! | TTATGTGAAAAACTACTGTA+AGG | + | chr8_2:57072200-57072219 | Msa1256810:intron | 25.0% |
| ! | AAACAGTCTTACAAATATGA+TGG | - | chr8_2:57072478-57072497 | None:intergenic | 25.0% |
| ! | ATCATATTTGTAAGACTGTT+TGG | + | chr8_2:57072477-57072496 | Msa1256810:intron | 25.0% |
| ! | TCATATTTGTAAGACTGTTT+GGG | + | chr8_2:57072478-57072497 | Msa1256810:intron | 25.0% |
| ! | TTTCATAAACTATCTTACAG+AGG | - | chr8_2:57072562-57072581 | None:intergenic | 25.0% |
| !!! | GTACTTCTTTAATTTTGAAC+AGG | + | chr8_2:57072741-57072760 | Msa1256810:intron | 25.0% |
| ! | ATCATTGAACATTGTAATCA+CGG | - | chr8_2:57072903-57072922 | None:intergenic | 25.0% |
| ! | TATAAGAATCATAGAAATGC+AGG | + | chr8_2:57073051-57073070 | Msa1256810:three_prime_UTR | 25.0% |
| !!! | GTTCACTTTTTCAATACACA+AGG | + | chr8_2:57069624-57069643 | Msa1256810:five_prime_UTR | 30.0% |
| !! | GTAAAGGGTATTGTAAAAGA+AGG | - | chr8_2:57070034-57070053 | None:intergenic | 30.0% |
| !! | GATTGAAACTTTGAGGTAAA+GGG | - | chr8_2:57070049-57070068 | None:intergenic | 30.0% |
| !! | AGATTGAAACTTTGAGGTAA+AGG | - | chr8_2:57070050-57070069 | None:intergenic | 30.0% |
| CTTGAAAGATTGAAACTTTG+AGG | - | chr8_2:57070056-57070075 | None:intergenic | 30.0% | |
| TGAAAAGAGAAAGTAAAGAG+AGG | - | chr8_2:57070119-57070138 | None:intergenic | 30.0% | |
| AAGAGAAAATCAAGAAGAGT+TGG | - | chr8_2:57070145-57070164 | None:intergenic | 30.0% | |
| GAGTTAAAGAGCTTAAATTC+TGG | + | chr8_2:57070295-57070314 | Msa1256810:CDS | 30.0% | |
| TTATGAAGGTGAGTTTCATA+AGG | + | chr8_2:57070351-57070370 | Msa1256810:CDS | 30.0% | |
| TATGAAGGTGAGTTTCATAA+GGG | + | chr8_2:57070352-57070371 | Msa1256810:CDS | 30.0% | |
| !!! | GGAATTTATAGGTTTTTTGG+TGG | + | chr8_2:57070529-57070548 | Msa1256810:CDS | 30.0% |
| ATTATGTTGGGGAATTCAAA+TGG | + | chr8_2:57070626-57070645 | Msa1256810:CDS | 30.0% | |
| TTATGTTGGGGAATTCAAAT+GGG | + | chr8_2:57070627-57070646 | Msa1256810:CDS | 30.0% | |
| ! | TAACCATTCTGATAATGCTA+AGG | - | chr8_2:57070734-57070753 | None:intergenic | 30.0% |
| !! | TGTTGATTCTTTGTTAAGTG+TGG | + | chr8_2:57070756-57070775 | Msa1256810:intron | 30.0% |
| TAATTGTGTCAATGTCAAGT+CGG | + | chr8_2:57071023-57071042 | Msa1256810:intron | 30.0% | |
| GTCAAATTCTTCACATATAG+TGG | + | chr8_2:57071125-57071144 | Msa1256810:intron | 30.0% | |
| !! | AATCACTTTTACAAGTTCAG+CGG | + | chr8_2:57071259-57071278 | Msa1256810:intron | 30.0% |
| ATTAACCACGATTCAGTATT+TGG | + | chr8_2:57071451-57071470 | Msa1256810:intron | 30.0% | |
| ! | GTATACTTTTCTGCTTTCAT+GGG | + | chr8_2:57071473-57071492 | Msa1256810:intron | 30.0% |
| GGTTGAGACATTATATAGTT+TGG | - | chr8_2:57071551-57071570 | None:intergenic | 30.0% | |
| ! | TTGTTATTACTGCAGAAATG+GGG | + | chr8_2:57071866-57071885 | Msa1256810:intron | 30.0% |
| !! | GGAATGTACACTTTTAGAAA+CGG | + | chr8_2:57072002-57072021 | Msa1256810:CDS | 30.0% |
| !! | GAATGTACACTTTTAGAAAC+GGG | + | chr8_2:57072003-57072022 | Msa1256810:CDS | 30.0% |
| !! | AATGTACACTTTTAGAAACG+GGG | + | chr8_2:57072004-57072023 | Msa1256810:CDS | 30.0% |
| !!! | TATGACTGTCTTGCTTTTTA+GGG | - | chr8_2:57072070-57072089 | None:intergenic | 30.0% |
| !!! | ATATGACTGTCTTGCTTTTT+AGG | - | chr8_2:57072071-57072090 | None:intergenic | 30.0% |
| AAAAAGCAAGACAGTCATAT+TGG | + | chr8_2:57072071-57072090 | Msa1256810:CDS | 30.0% | |
| AAAAGCAAGACAGTCATATT+GGG | + | chr8_2:57072072-57072091 | Msa1256810:CDS | 30.0% | |
| ATCCAAAAATGACTATTACC+TGG | - | chr8_2:57072139-57072158 | None:intergenic | 30.0% | |
| ! | GTGTTTCTATTTCTCTGTAT+TGG | + | chr8_2:57073139-57073158 | Msa1256810:three_prime_UTR | 30.0% |
| TAGAGTTCAATGACAAAAAG+TGG | - | chr8_2:57073191-57073210 | None:intergenic | 30.0% | |
| ! | CTTTTTGTCATTGAACTCTA+TGG | + | chr8_2:57073191-57073210 | Msa1256810:three_prime_UTR | 30.0% |
| TTATGAACATAGGAAGAGTA+AGG | + | chr8_2:57073262-57073281 | Msa1256810:three_prime_UTR | 30.0% | |
| TGTAAACCCTATACTAACTT+TGG | - | chr8_2:57073342-57073361 | None:intergenic | 30.0% | |
| TACGCTAATATGTTCATAAC+AGG | - | chr8_2:57073374-57073393 | None:intergenic | 30.0% | |
| TGAACATATTAGCGTATCTT+TGG | + | chr8_2:57073378-57073397 | Msa1256810:three_prime_UTR | 30.0% | |
| !!! | AATTCTATTTTGATGCTCTC+TGG | - | chr8_2:57073411-57073430 | None:intergenic | 30.0% |
| ATAGAATTGATTATGCCTCT+TGG | + | chr8_2:57073423-57073442 | Msa1256810:three_prime_UTR | 30.0% | |
| TTGGTGAAAATACAAGTGTT+TGG | + | chr8_2:57073442-57073461 | Msa1256810:three_prime_UTR | 30.0% | |
| !!! | CACTTTTTCAATACACAAGG+CGG | + | chr8_2:57069627-57069646 | Msa1256810:five_prime_UTR | 35.0% |
| AACAAACAGTTTCTAAGCTC+CGG | + | chr8_2:57069673-57069692 | Msa1256810:five_prime_UTR | 35.0% | |
| GAAAATGATGAGGAGTAACT+TGG | - | chr8_2:57069931-57069950 | None:intergenic | 35.0% | |
| TGTTCATGGTGAAAATGATG+AGG | - | chr8_2:57069941-57069960 | None:intergenic | 35.0% | |
| GAGAAAGTAAAGAGAGGTTA+AGG | - | chr8_2:57070113-57070132 | None:intergenic | 35.0% | |
| TCAACGATCTTGAGAAGAAT+AGG | - | chr8_2:57070207-57070226 | None:intergenic | 35.0% | |
| AACGTGTTGTATGGTCAATT+GGG | + | chr8_2:57070260-57070279 | Msa1256810:CDS | 35.0% | |
| AGAGCTTAAATTCTGGATCT+TGG | + | chr8_2:57070302-57070321 | Msa1256810:CDS | 35.0% | |
| GAGCTTAAATTCTGGATCTT+GGG | + | chr8_2:57070303-57070322 | Msa1256810:CDS | 35.0% | |
| ! | AGCAATGGTGATGTTTATGA+AGG | + | chr8_2:57070337-57070356 | Msa1256810:CDS | 35.0% |
| ATGAAGGTGAGTTTCATAAG+GGG | + | chr8_2:57070353-57070372 | Msa1256810:CDS | 35.0% | |
| CATATGAGTGGAAGATTTGA+AGG | + | chr8_2:57070406-57070425 | Msa1256810:CDS | 35.0% | |
| TTTGAAGGTGATTGGATTGA+TGG | + | chr8_2:57070421-57070440 | Msa1256810:CDS | 35.0% | |
| ! | TGGATTGATGGAAAGTATGA+TGG | + | chr8_2:57070433-57070452 | Msa1256810:CDS | 35.0% |
| ! | GGATTGATGGAAAGTATGAT+GGG | + | chr8_2:57070434-57070453 | Msa1256810:CDS | 35.0% |
| GGCATGGAATTGGAATTTAT+AGG | + | chr8_2:57070518-57070537 | Msa1256810:CDS | 35.0% | |
| !! | TTTGGTGGTGATGTTTATAC+TGG | + | chr8_2:57070544-57070563 | Msa1256810:CDS | 35.0% |
| GTGATGTTTATACTGGTGAA+TGG | + | chr8_2:57070551-57070570 | Msa1256810:CDS | 35.0% | |
| TATACTGGTGAATGGTGTAA+TGG | + | chr8_2:57070559-57070578 | Msa1256810:CDS | 35.0% | |
| GAGTTCATACTTGCAATGAT+GGG | + | chr8_2:57070599-57070618 | Msa1256810:CDS | 35.0% | |
| ! | AATGATGGGAGTCATTATGT+TGG | + | chr8_2:57070613-57070632 | Msa1256810:CDS | 35.0% |
| ! | ATGATGGGAGTCATTATGTT+GGG | + | chr8_2:57070614-57070633 | Msa1256810:CDS | 35.0% |
| TATGTTGGGGAATTCAAATG+GGG | + | chr8_2:57070628-57070647 | Msa1256810:CDS | 35.0% | |
| ! | TTCAAATGGGGTGTTAAACA+TGG | + | chr8_2:57070640-57070659 | Msa1256810:CDS | 35.0% |
| !! | GTGTTAAACATGGATTAGGA+CGG | + | chr8_2:57070650-57070669 | Msa1256810:CDS | 35.0% |
| GTTCCTTAGCATTATCAGAA+TGG | + | chr8_2:57070728-57070747 | Msa1256810:intron | 35.0% | |
| TTCTTTGTTAAGTGTGGACT+TGG | + | chr8_2:57070762-57070781 | Msa1256810:intron | 35.0% | |
| ! | CTGACTTCAATCTGAAGTAT+TGG | + | chr8_2:57071072-57071091 | Msa1256810:intron | 35.0% |
| ATAGTGGTCATTGTGATTCT+AGG | + | chr8_2:57071141-57071160 | Msa1256810:intron | 35.0% | |
| CAGGTTGTTGAAAATTTGAG+TGG | - | chr8_2:57071204-57071223 | None:intergenic | 35.0% | |
| ! | CTCAAATTTTCAACAACCTG+TGG | + | chr8_2:57071204-57071223 | Msa1256810:intron | 35.0% |
| GCAAGGTAAATGAATCAAAC+AGG | - | chr8_2:57071238-57071257 | None:intergenic | 35.0% | |
| ACTTGTAAAAGTGATTGGCA+AGG | - | chr8_2:57071255-57071274 | None:intergenic | 35.0% | |
| GCTGAACTTGTAAAAGTGAT+TGG | - | chr8_2:57071260-57071279 | None:intergenic | 35.0% | |
| ! | CGGCGATATTTATTTAGCTT+TGG | + | chr8_2:57071279-57071298 | Msa1256810:intron | 35.0% |
| TGTTGTTGGCATTGTTTGTT+CGG | - | chr8_2:57071321-57071340 | None:intergenic | 35.0% | |
| CTAGTACAACAGAATGTTGT+TGG | - | chr8_2:57071335-57071354 | None:intergenic | 35.0% | |
| CTTTCAAAAGCCAAAAGGAT+TGG | + | chr8_2:57071417-57071436 | Msa1256810:intron | 35.0% | |
| ATCGTGGTTAATGAGAAACT+AGG | - | chr8_2:57071443-57071462 | None:intergenic | 35.0% | |
| GTATACCAAATACTGAATCG+TGG | - | chr8_2:57071459-57071478 | None:intergenic | 35.0% | |
| ! | GGTATACTTTTCTGCTTTCA+TGG | + | chr8_2:57071472-57071491 | Msa1256810:intron | 35.0% |
| AACTTGACCATATTCTTGCA+CGG | - | chr8_2:57071689-57071708 | None:intergenic | 35.0% | |
| ! | ATATGCCGGAGAATATTTTG+CGG | + | chr8_2:57071893-57071912 | Msa1256810:CDS | 35.0% |
| CATATCCGCAAAATATTCTC+CGG | - | chr8_2:57071901-57071920 | None:intergenic | 35.0% | |
| ! | TATTTTGCGGATATGATGCA+TGG | + | chr8_2:57071906-57071925 | Msa1256810:CDS | 35.0% |
| GGAGTCTATCAATTTCAGAA+TGG | + | chr8_2:57071933-57071952 | Msa1256810:CDS | 35.0% | |
| !! | GTCCAGGTAATAGTCATTTT+TGG | + | chr8_2:57072134-57072153 | Msa1256810:intron | 35.0% |
| AAATCAGGGAATGTCTATTC+AGG | - | chr8_2:57072359-57072378 | None:intergenic | 35.0% | |
| GTCAATTAAAATAAGCCCTC+AGG | - | chr8_2:57072429-57072448 | None:intergenic | 35.0% | |
| GCTGCAAACACTTAATTAAG+TGG | + | chr8_2:57072674-57072693 | Msa1256810:intron | 35.0% | |
| AATGTCAAAGAAGGATGAAC+TGG | + | chr8_2:57072795-57072814 | Msa1256810:CDS | 35.0% | |
| GACAAAAAGTGGTTCCAAAT+AGG | - | chr8_2:57073180-57073199 | None:intergenic | 35.0% | |
| ! | TTGAGTTGCAATGTGTATTG+TGG | + | chr8_2:57073296-57073315 | Msa1256810:three_prime_UTR | 35.0% |
| TTAGTATAGGGTTTACATGC+TGG | + | chr8_2:57073345-57073364 | Msa1256810:three_prime_UTR | 35.0% | |
| ! | ACACTTGTATTTTCACCAAG+AGG | - | chr8_2:57073441-57073460 | None:intergenic | 35.0% |
| TTGTGTGTAGGTGTATGAGA+TGG | - | chr8_2:57069992-57070011 | None:intergenic | 40.0% | |
| !!! | TGATGGGTTTTGTTGTGTGT+AGG | - | chr8_2:57070004-57070023 | None:intergenic | 40.0% |
| CTCATCATCAACGTGTTGTA+TGG | + | chr8_2:57070251-57070270 | Msa1256810:CDS | 40.0% | |
| CAACGTGTTGTATGGTCAAT+TGG | + | chr8_2:57070259-57070278 | Msa1256810:CDS | 40.0% | |
| TGTATGGTCAATTGGGTCAA+AGG | + | chr8_2:57070267-57070286 | Msa1256810:CDS | 40.0% | |
| ! | TGGGTTCAAGTTTACAGCAA+TGG | + | chr8_2:57070322-57070341 | Msa1256810:CDS | 40.0% |
| GTGGAAGATTTGAAGGTGAT+TGG | + | chr8_2:57070413-57070432 | Msa1256810:CDS | 40.0% | |
| !! | GATGGAAAGTATGATGGGTT+TGG | + | chr8_2:57070439-57070458 | Msa1256810:CDS | 40.0% |
| TATCGTGGACAGTATAGGAA+GGG | + | chr8_2:57070490-57070509 | Msa1256810:CDS | 40.0% | |
| GGAGTTCATACTTGCAATGA+TGG | + | chr8_2:57070598-57070617 | Msa1256810:CDS | 40.0% | |
| TGATGGGAGTCATTATGTTG+GGG | + | chr8_2:57070615-57070634 | Msa1256810:CDS | 40.0% | |
| ! | TGGGGTGTTAAACATGGATT+AGG | + | chr8_2:57070646-57070665 | Msa1256810:CDS | 40.0% |
| GTTAAGTGTGGACTTGGATT+AGG | + | chr8_2:57070768-57070787 | Msa1256810:intron | 40.0% | |
| !!! | GTTTTGGTTAAGTGTGCTTC+TGG | + | chr8_2:57070859-57070878 | Msa1256810:intron | 40.0% |
| AGTCAGATTGAATGCATGTC+TGG | - | chr8_2:57071058-57071077 | None:intergenic | 40.0% | |
| ! | AGAAACTAGGCCAATCCTTT+TGG | - | chr8_2:57071430-57071449 | None:intergenic | 40.0% |
| ACTGTATCCGTGCAAGAATA+TGG | + | chr8_2:57071679-57071698 | Msa1256810:intron | 40.0% | |
| TGTCGAAGCTAATTTCAAGG+AGG | - | chr8_2:57071825-57071844 | None:intergenic | 40.0% | |
| AGCTGTCGAAGCTAATTTCA+AGG | - | chr8_2:57071828-57071847 | None:intergenic | 40.0% | |
| AGAAATGGGGACATATATGC+CGG | + | chr8_2:57071879-57071898 | Msa1256810:intron | 40.0% | |
| TGTGGCTTTCCTTGTATCTT+TGG | + | chr8_2:57072281-57072300 | Msa1256810:intron | 40.0% | |
| ATGGCAACACCAAAGATACA+AGG | - | chr8_2:57072293-57072312 | None:intergenic | 40.0% | |
| ATGTCCATCACGAATCATGA+TGG | - | chr8_2:57072312-57072331 | None:intergenic | 40.0% | |
| TACTTTCTACTTGGGCTTTC+TGG | + | chr8_2:57072389-57072408 | Msa1256810:intron | 40.0% | |
| ! | ATAAGCCCTCAGGTTGTTTA+AGG | - | chr8_2:57072419-57072438 | None:intergenic | 40.0% |
| ATCCTTCTTTGACATTCCGT+AGG | - | chr8_2:57072791-57072810 | None:intergenic | 40.0% | |
| TCACACGATAGACGAAATGA+GGG | - | chr8_2:57072929-57072948 | None:intergenic | 40.0% | |
| ATCACACGATAGACGAAATG+AGG | - | chr8_2:57072930-57072949 | None:intergenic | 40.0% | |
| ! | TCTGTATTGGTATAGCAGTG+AGG | + | chr8_2:57073152-57073171 | Msa1256810:three_prime_UTR | 40.0% |
| ATAGCAGTGAGGTTCCTATT+TGG | + | chr8_2:57073163-57073182 | Msa1256810:three_prime_UTR | 40.0% | |
| TTGAACTCTATGGCAGATTG+TGG | + | chr8_2:57073201-57073220 | Msa1256810:three_prime_UTR | 40.0% | |
| !! | TGCTTGAGAAGCGTTGTTCA+TGG | - | chr8_2:57069955-57069974 | None:intergenic | 45.0% |
| GGTGTATGAGATGGTGAAGA+TGG | - | chr8_2:57069983-57070002 | None:intergenic | 45.0% | |
| GTCAATTGGGTCAAAGGATG+AGG | + | chr8_2:57070273-57070292 | Msa1256810:CDS | 45.0% | |
| !! | TTTCATAAGGGGAAGTGCTC+AGG | + | chr8_2:57070364-57070383 | Msa1256810:CDS | 45.0% |
| !! | TTCATAAGGGGAAGTGCTCA+GGG | + | chr8_2:57070365-57070384 | Msa1256810:CDS | 45.0% |
| !! | ATGGGTTTGGTGTTGAAACG+TGG | + | chr8_2:57070452-57070471 | Msa1256810:CDS | 45.0% |
| !! | TGGGTTTGGTGTTGAAACGT+GGG | + | chr8_2:57070453-57070472 | Msa1256810:CDS | 45.0% |
| ! | GTAGGTATCGTGGACAGTAT+AGG | + | chr8_2:57070485-57070504 | Msa1256810:CDS | 45.0% |
| GTATCGTGGACAGTATAGGA+AGG | + | chr8_2:57070489-57070508 | Msa1256810:CDS | 45.0% | |
| GACAGTATAGGAAGGGTTTG+AGG | + | chr8_2:57070497-57070516 | Msa1256810:CDS | 45.0% | |
| ! | TATAGGAAGGGTTTGAGGCA+TGG | + | chr8_2:57070502-57070521 | Msa1256810:CDS | 45.0% |
| ! | AAGGGTTTGAGGCATGGAAT+TGG | + | chr8_2:57070508-57070527 | Msa1256810:CDS | 45.0% |
| TGGTGTAATGGTCAGTGTCA+TGG | + | chr8_2:57070571-57070590 | Msa1256810:CDS | 45.0% | |
| AATGGTCAGTGTCATGGCTT+TGG | + | chr8_2:57070577-57070596 | Msa1256810:CDS | 45.0% | |
| GATTAGGACGGTACCATTTC+AGG | + | chr8_2:57070662-57070681 | Msa1256810:CDS | 45.0% | |
| ! | TTCTGGTTGTTTGATGCAGC+AGG | + | chr8_2:57070876-57070895 | Msa1256810:intron | 45.0% |
| !! | GCAGCAGGACTTTGATTTTC+TGG | + | chr8_2:57070891-57070910 | Msa1256810:intron | 45.0% |
| TGTCAATGTCAAGTCGGTGT+CGG | + | chr8_2:57071029-57071048 | Msa1256810:intron | 45.0% | |
| TCAGAATGGTCACCGATATG+AGG | + | chr8_2:57071947-57071966 | Msa1256810:CDS | 45.0% | |
| CAGAATGGTCACCGATATGA+GGG | + | chr8_2:57071948-57071967 | Msa1256810:CDS | 45.0% | |
| TGGCATGAAGGAAGAAGACA+AGG | + | chr8_2:57071975-57071994 | Msa1256810:CDS | 45.0% | |
| TGAAGGAAGAAGACAAGGAC+TGG | + | chr8_2:57071980-57071999 | Msa1256810:CDS | 45.0% | |
| GAAGGAAGAAGACAAGGACT+GGG | + | chr8_2:57071981-57072000 | Msa1256810:CDS | 45.0% | |
| !! | CAGCTTTGAAAACCTTGGCA+TGG | - | chr8_2:57072115-57072134 | None:intergenic | 45.0% |
| !! | CTGGACAGCTTTGAAAACCT+TGG | - | chr8_2:57072120-57072139 | None:intergenic | 45.0% |
| ! | CAAGGTTTTCAAAGCTGTCC+AGG | + | chr8_2:57072118-57072137 | Msa1256810:CDS | 45.0% |
| GTTGCCATCATGATTCGTGA+TGG | + | chr8_2:57072305-57072324 | Msa1256810:intron | 45.0% | |
| TTTCTACTTGGGCTTTCTGG+TGG | + | chr8_2:57072392-57072411 | Msa1256810:intron | 45.0% | |
| GTGGACCTTAAACAACCTGA+GGG | + | chr8_2:57072411-57072430 | Msa1256810:intron | 45.0% | |
| TGAACAGGATGCTCATTGTG+CGG | + | chr8_2:57072756-57072775 | Msa1256810:intron | 45.0% | |
| AGCCTACGGAATGTCAAAGA+AGG | + | chr8_2:57072786-57072805 | Msa1256810:CDS | 45.0% | |
| ! | GAAGAGTGCAGCTTTCTCAT+AGG | + | chr8_2:57072976-57072995 | Msa1256810:three_prime_UTR | 45.0% |
| CCTTGTTCTCATCCTCACTT+CGG | + | chr8_2:57073114-57073133 | Msa1256810:three_prime_UTR | 45.0% | |
| ATAGAAACACCTCCGAAGTG+AGG | - | chr8_2:57073129-57073148 | None:intergenic | 45.0% | |
| TGGCAGATTGTGGAGCAAAT+AGG | + | chr8_2:57073211-57073230 | Msa1256810:three_prime_UTR | 45.0% | |
| !!! | ATTACTTTTTATAAATTAAA+AGG | + | chr8_2:57072224-57072243 | Msa1256810:intron | 5.0% |
| !!! | TTACTTTTTATAAATTAAAA+GGG | + | chr8_2:57072225-57072244 | Msa1256810:intron | 5.0% |
| !! | AAACGTGGGCTAGAGGAAGT+AGG | + | chr8_2:57070467-57070486 | Msa1256810:CDS | 50.0% |
| ! | GCTAGAGGAAGTAGGTATCG+TGG | + | chr8_2:57070475-57070494 | Msa1256810:CDS | 50.0% |
| CAAACAGGTGCTTCAACCAC+AGG | - | chr8_2:57071223-57071242 | None:intergenic | 50.0% | |
| GCGGATATGATGCATGGCTT+TGG | + | chr8_2:57071912-57071931 | Msa1256810:CDS | 50.0% | |
| AGAAACGGGGAAACACAGTG+TGG | + | chr8_2:57072017-57072036 | Msa1256810:CDS | 50.0% | |
| AGTGTGGTCACTGGCAGAAT+GGG | + | chr8_2:57072033-57072052 | Msa1256810:CDS | 50.0% | |
| TTGGCATGGTCTACAGCACA+TGG | - | chr8_2:57072101-57072120 | None:intergenic | 50.0% | |
| ATGTGCTGTAGACCATGCCA+AGG | + | chr8_2:57072100-57072119 | Msa1256810:CDS | 50.0% | |
| GGTGGACCTTAAACAACCTG+AGG | + | chr8_2:57072410-57072429 | Msa1256810:intron | 50.0% | |
| AGCTAGAGTTGCAGCTGTGA+AGG | + | chr8_2:57072858-57072877 | Msa1256810:CDS | 50.0% | |
| CCGAAGTGAGGATGAGAACA+AGG | - | chr8_2:57073117-57073136 | None:intergenic | 50.0% | |
| TGTTCTCATCCTCACTTCGG+AGG | + | chr8_2:57073117-57073136 | Msa1256810:three_prime_UTR | 50.0% | |
| !! | GGTGTTGAAACGTGGGCTAG+AGG | + | chr8_2:57070460-57070479 | Msa1256810:CDS | 55.0% |
| CATGCCACGCACCCTCATAT+CGG | - | chr8_2:57071962-57071981 | None:intergenic | 55.0% | |
| ! | TATGAGGGTGCGTGGCATGA+AGG | + | chr8_2:57071963-57071982 | Msa1256810:CDS | 55.0% |
| GGGAAACACAGTGTGGTCAC+TGG | + | chr8_2:57072024-57072043 | Msa1256810:CDS | 55.0% | |
| CAGTGTGGTCACTGGCAGAA+TGG | + | chr8_2:57072032-57072051 | Msa1256810:CDS | 55.0% | |
| ACAGGATGCTCATTGTGCGG+CGG | + | chr8_2:57072759-57072778 | Msa1256810:intron | 55.0% | |
| !! | AAGGGGAAGTGCTCAGGGAG+TGG | + | chr8_2:57070370-57070389 | Msa1256810:CDS | 60.0% |
| ! | GTCACCGATATGAGGGTGCG+TGG | + | chr8_2:57071955-57071974 | Msa1256810:CDS | 60.0% |
| TGTGCGGCGGAGAAAGCCTA+CGG | + | chr8_2:57072772-57072791 | Msa1256810:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 57069608 | 57073490 | 57069608 | ID=Msa1256810;Name=Msa1256810 |
| chr8_2 | mRNA | 57069608 | 57073490 | 57069608 | ID=Msa1256810-mRNA-1;Parent=Msa1256810;Name=Msa1256810-mRNA-1;_AED=0.05;_eAED=0.05;_QI=234|1|1|1|1|1|3|569|419 |
| chr8_2 | exon | 57069608 | 57070683 | 57069608 | ID=Msa1256810-mRNA-1:exon:17549;Parent=Msa1256810-mRNA-1 |
| chr8_2 | exon | 57071881 | 57072139 | 57071881 | ID=Msa1256810-mRNA-1:exon:17550;Parent=Msa1256810-mRNA-1 |
| chr8_2 | exon | 57072763 | 57073490 | 57072763 | ID=Msa1256810-mRNA-1:exon:17551;Parent=Msa1256810-mRNA-1 |
| chr8_2 | five_prime_UTR | 57069608 | 57069841 | 57069608 | ID=Msa1256810-mRNA-1:five_prime_utr;Parent=Msa1256810-mRNA-1 |
| chr8_2 | CDS | 57069842 | 57070683 | 57069842 | ID=Msa1256810-mRNA-1:cds;Parent=Msa1256810-mRNA-1 |
| chr8_2 | CDS | 57071881 | 57072139 | 57071881 | ID=Msa1256810-mRNA-1:cds;Parent=Msa1256810-mRNA-1 |
| chr8_2 | CDS | 57072763 | 57072921 | 57072763 | ID=Msa1256810-mRNA-1:cds;Parent=Msa1256810-mRNA-1 |
| chr8_2 | three_prime_UTR | 57072922 | 57073490 | 57072922 | ID=Msa1256810-mRNA-1:three_prime_utr;Parent=Msa1256810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
