AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1172120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1172120 MtrunA17_Chr4g0059231 96.748 123 4 0 1 123 139 261 2.26e-83 244
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 508 sgRNAs with CRISPR-Local

Find 969 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTCAAGCCTATTAATT+TGG 0.068026 8_1:+1994555 None:intergenic
ATGCTACCATTTCCGCTTAA+TGG 0.112507 8_1:-1994418 Msa1172120:three_prime_UTR
CGCCCGGATGTCTCTGAATT+TGG 0.132409 8_1:+1999573 None:intergenic
TTCTATTTCTTTCTACCTTA+TGG 0.139729 8_1:-1996096 Msa1172120:CDS
TGCTTGTGTGTTTGCTTAAT+TGG 0.149465 8_1:-1996569 Msa1172120:CDS
GCGCATCTATTGCGGAATTT+TGG 0.158706 8_1:+1998418 None:intergenic
TACACCATTAACTCTTTCTT+TGG 0.175568 8_1:-2000448 Msa1172120:five_prime_UTR
TGCTCTACACCCTTCTTAAA+TGG 0.197274 8_1:+1991656 None:intergenic
TTAAACTACTATACCTAATT+TGG 0.199772 8_1:+1995140 None:intergenic
AACATGAATTTAACTAAAAT+TGG 0.209380 8_1:-1995902 Msa1172120:three_prime_UTR
GTTTCCACATGCTCCATAAA+AGG 0.215854 8_1:-1998990 Msa1172120:five_prime_UTR
ACACGGCAAGAACATTTATT+TGG 0.230172 8_1:+1996764 None:intergenic
TCCTAGCCATCACTCCTTTC+AGG 0.239447 8_1:-1997322 Msa1172120:five_prime_UTR
TAAGATGCAATGTTTGTTCT+TGG 0.242523 8_1:-2000138 Msa1172120:five_prime_UTR
AGAGCATTTCATTAATAATA+AGG 0.243948 8_1:-1999761 Msa1172120:five_prime_UTR
CTGGATATTGGTCCGGGATT+TGG 0.247256 8_1:+1998665 None:intergenic
ACAAGCTTGTTAATGTTATA+AGG 0.248353 8_1:+1995673 None:intergenic
TGATTAGAATCAAGATCTTT+TGG 0.250472 8_1:+1996051 None:intergenic
TCCCACCCGTGTTCGTTTAC+AGG 0.250797 8_1:+1998747 None:intergenic
CATCCCCTACTTGTCAAAAT+TGG 0.252098 8_1:+1999862 None:intergenic
TCTAGGCACCGGTAAGTATC+TGG 0.252775 8_1:+1997790 None:intergenic
CACAAAGGAAAATTTGCTTT+TGG 0.256876 8_1:+1994525 None:intergenic
TTAAGATTGCCCAAATTAAT+AGG 0.258394 8_1:-1994565 Msa1172120:three_prime_UTR
GGTGTTCTGAATATAGTTTC+TGG 0.259968 8_1:-1992448 Msa1172120:three_prime_UTR
AACAGATTTGATCTTCCTTT+TGG 0.262074 8_1:+1998927 None:intergenic
TGCTGTCAGAAAAGTATTAT+TGG 0.262140 8_1:-1998233 Msa1172120:five_prime_UTR
GCCCGTTGACTATGAAATTC+TGG 0.262461 8_1:-1995716 Msa1172120:three_prime_UTR
TCCCTATCTTCTTCTTCTTC+TGG 0.264024 8_1:-1994029 Msa1172120:three_prime_UTR
GAACTCTATAACTAACATTA+TGG 0.265805 8_1:+1997754 None:intergenic
TATACACAGCATCTTATAAA+TGG 0.269568 8_1:-1993786 Msa1172120:three_prime_UTR
ATTAAGAGGAAAAGTGATTT+AGG 0.272389 8_1:+1994651 None:intergenic
ATAGCTAAAGATGAAATATT+TGG 0.274465 8_1:-1991167 Msa1172120:three_prime_UTR
AACCAAGGTTCATCTATAAT+AGG 0.276177 8_1:-1998358 Msa1172120:five_prime_UTR
ATGGGAGTTCATGCTGTTCT+AGG 0.279858 8_1:+1997773 None:intergenic
TCTTGTCCTTGTAATGATTA+TGG 0.283904 8_1:+1994125 None:intergenic
ATTGATCTATTATCCTAGTT+AGG 0.286373 8_1:-1999970 Msa1172120:five_prime_UTR
AATTATGTACAGATTTAAAA+AGG 0.294337 8_1:+1997115 None:intergenic
AAAGAGATGCAAAGAAAATA+AGG 0.307413 8_1:-1994787 Msa1172120:three_prime_UTR
GAGGTATTCACTGGCTTTCT+TGG 0.313170 8_1:+1998062 None:intergenic
TCTTTCTTTGGACCTGATAT+TGG 0.315275 8_1:-2000436 Msa1172120:five_prime_UTR
TCTCTTATTCTTGTCTCATA+AGG 0.315763 8_1:-1996962 Msa1172120:five_prime_UTR
TGCAAAGGCTATTCCTTTAC+CGG 0.317499 8_1:+1999419 None:intergenic
TTTCTACTACATCATTATCT+TGG 0.317568 8_1:-2000335 Msa1172120:five_prime_UTR
GCTGTCAGAAAAGTATTATT+GGG 0.321948 8_1:-1998232 Msa1172120:five_prime_UTR
ATTGTACTTGTTTAGTTTGT+TGG 0.322231 8_1:-1988077 Msa1172120:three_prime_UTR
AAATTCAAGCCTATTAATTT+GGG 0.323596 8_1:+1994556 None:intergenic
CGATTGTTCCTTTGCGGTGC+AGG 0.323981 8_1:+1998843 None:intergenic
GCCCGGATGTCTCTGAATTT+GGG 0.332299 8_1:+1999574 None:intergenic
AACTTCAAGATTGTCTGAAC+TGG 0.334566 8_1:+1991143 None:intergenic
TTTGATGCTGCAATTCCTTT+TGG 0.337580 8_1:-1988211 Msa1172120:three_prime_UTR
CAGGGGCAATGTTGCTGTGC+TGG 0.338597 8_1:-1991764 Msa1172120:three_prime_UTR
TATCATATGCACCATTTGTT+TGG 0.340108 8_1:+1994194 None:intergenic
TGCATATCATATGGTTTGTA+TGG 0.341430 8_1:-1994713 Msa1172120:three_prime_UTR
CGGGCAAATGCGACACGTTA+TGG 0.342683 8_1:-1988331 Msa1172120:three_prime_UTR
GTTAGGCAATGGAGCAAAAC+TGG 0.343947 8_1:+1998378 None:intergenic
CTTATGTTTGCTTGGAAAGT+TGG 0.345455 8_1:-1992800 Msa1172120:three_prime_UTR
TGGTCCCATCATCCCGGGGC+GGG 0.345799 8_1:+1997430 None:intergenic
CTTGTATAATGGATGAATTC+TGG 0.347028 8_1:-1995655 Msa1172120:three_prime_UTR
GGAGGATCTCGGTGGTGTAT+AGG 0.347392 8_1:+1998319 None:intergenic
TGACAATTTGGTGATGTTAT+AGG 0.348214 8_1:-1994813 Msa1172120:three_prime_UTR
AATTCTAGTATTAGTATTCA+TGG 0.353280 8_1:-1997234 Msa1172120:five_prime_UTR
GTGCTGTGGCAGTCTTAAAA+AGG 0.354745 8_1:+2000662 None:intergenic
ATATCAGTCAATGCTACTTA+TGG 0.355555 8_1:-1996232 Msa1172120:CDS
TGATGTGACATGTGACAATT+TGG 0.355569 8_1:-1994825 Msa1172120:three_prime_UTR
GAGGATCTCGGTGGTGTATA+GGG 0.356448 8_1:+1998320 None:intergenic
GCACAAATGATGAACAAATA+AGG 0.357290 8_1:-1997479 Msa1172120:five_prime_UTR
ACTCAAAGGTTGAGTTTAAT+CGG 0.358908 8_1:+1999643 None:intergenic
CTAGAGTATGACCACCAAAA+AGG 0.359747 8_1:+2000389 None:intergenic
GGTCCCATCATCCCGGGGCG+GGG 0.360409 8_1:+1997431 None:intergenic
GCTCGCGAGGCCTTTGATAA+TGG 0.361374 8_1:-1993313 Msa1172120:three_prime_UTR
GTCTCTACCTTTACCCTTCA+AGG 0.363401 8_1:-2000624 Msa1172120:five_prime_UTR
AGGTCCAAAGAAAGAGTTAA+TGG 0.364018 8_1:+2000444 None:intergenic
GATATGAATATCACAGGTTT+AGG 0.368248 8_1:+1999360 None:intergenic
ACAACAGCATCTGGGTTAAC+TGG 0.370584 8_1:+1996602 None:intergenic
AACATAGGAACTTAAAGCTT+TGG 0.372183 8_1:+1999010 None:intergenic
CTTCACAAGTAGAGTGCTAT+TGG 0.377076 8_1:-1996868 Msa1172120:five_prime_UTR
ATTGAGACTAGAGAGAGAAT+TGG 0.377503 8_1:+1994442 None:intergenic
ATATGATATGCAAGTGGAAA+TGG 0.377901 8_1:+1994724 None:intergenic
TTCTACTACATCATTATCTT+GGG 0.378502 8_1:-2000334 Msa1172120:five_prime_UTR
ATACTTCGCCACGCGTAACT+TGG 0.386118 8_1:-1998271 Msa1172120:five_prime_UTR
ATTTCCACTTGCATATCATA+TGG 0.386302 8_1:-1994722 Msa1172120:three_prime_UTR
CAATGATGAGATTGCAGCTC+TGG 0.388029 8_1:-1993126 Msa1172120:three_prime_UTR
ATCACAAACTACACAATTCA+TGG 0.388645 8_1:-1998788 Msa1172120:five_prime_UTR
AGTCCGCGCCGTCCAGCAAT+TGG 0.389255 8_1:-1996156 Msa1172120:CDS
TCAGCCTCTTCTCCAATTGC+TGG 0.391388 8_1:+1996144 None:intergenic
ACATTAACAAGCTTGTATAA+TGG 0.391793 8_1:-1995666 Msa1172120:three_prime_UTR
CAGTGGCGCAGGTTGTAGAT+AGG 0.392530 8_1:+1999049 None:intergenic
CCAACTACAACAACAGCATC+TGG 0.395535 8_1:+1996593 None:intergenic
TATGGACCTTTATTATGCTT+TGG 0.395845 8_1:+1999470 None:intergenic
AATCAAGGGAGTTTGTAAAA+TGG 0.399194 8_1:-1998524 Msa1172120:five_prime_UTR
ACCATTCCAAAGCATAATAA+AGG 0.400414 8_1:-1999476 Msa1172120:five_prime_UTR
CTGAATATAGTTTCTGGCTA+TGG 0.400820 8_1:-1992442 Msa1172120:three_prime_UTR
TCAAATTATCAGATACTCTT+CGG 0.401344 8_1:-1997730 Msa1172120:five_prime_UTR
ACCAAGGTTCATCTATAATA+GGG 0.402607 8_1:-1998357 Msa1172120:five_prime_UTR
TGACTGAAGATGCCTTGATT+TGG 0.404287 8_1:+1998554 None:intergenic
ATTTGTCCTGCTACACCAAT+TGG 0.404459 8_1:+1992845 None:intergenic
TGTTTGTTCTTGGTATCTGC+TGG 0.404734 8_1:-2000128 Msa1172120:five_prime_UTR
TTGAGACTAGAGAGAGAATT+GGG 0.405508 8_1:+1994443 None:intergenic
GTCCATTCTAGATAATGCTT+TGG 0.405808 8_1:+1997190 None:intergenic
GTCTTTCCATTAAGCGGAAA+TGG 0.407428 8_1:+1994412 None:intergenic
CTTGATCGTAATCTACTTTG+AGG 0.407484 8_1:-2000069 Msa1172120:five_prime_UTR
GTCCCATCATCCCGGGGCGG+GGG 0.408012 8_1:+1997432 None:intergenic
TTCAGTCACTTGCTCAATCA+AGG 0.408440 8_1:-1998539 Msa1172120:five_prime_UTR
AGTGGGATTGGCAGGGAGAA+AGG 0.411173 8_1:-1988175 Msa1172120:three_prime_UTR
AAACATAGGCACTTCAGCTT+TGG 0.416059 8_1:+1993067 None:intergenic
TGCTATTGCAGCAGGTATAT+TGG 0.416135 8_1:-1999103 Msa1172120:five_prime_UTR
TTCCTCTACTTATGTTTGCT+TGG 0.416543 8_1:-1992808 Msa1172120:three_prime_UTR
GTACTTAGGTATATAAAGTC+TGG 0.417316 8_1:-1991391 Msa1172120:three_prime_UTR
AGTGATTTAGGTAGCTCATA+TGG 0.417489 8_1:+1994663 None:intergenic
CAAGAGCAAAGGGATATAAA+TGG 0.419206 8_1:+1995372 None:intergenic
GGGTGTAGAGCAAGGTCCTC+AGG 0.420237 8_1:-1991645 Msa1172120:intron
GCCAGTCCAATCTGATTACT+AGG 0.421423 8_1:-1995982 Msa1172120:three_prime_UTR
GCGTATCTATGATGAGTTCT+TGG 0.421951 8_1:-1991720 Msa1172120:three_prime_UTR
CTCTTGTGAGGTTAATTTGA+AGG 0.422261 8_1:+1994342 None:intergenic
CTGCTGTGTGCTATTGCAGC+AGG 0.422510 8_1:-1999111 Msa1172120:five_prime_UTR
AGGTATTCACTGGCTTTCTT+GGG 0.426053 8_1:+1998063 None:intergenic
GAATGTGGAGGTGGGAGATT+GGG 0.427261 8_1:-1991346 Msa1172120:three_prime_UTR
AACTCTATAACTAACATTAT+GGG 0.430488 8_1:+1997755 None:intergenic
TGGTAAGCCCAGATACTTAC+CGG 0.431562 8_1:-1997798 Msa1172120:five_prime_UTR
CCAGATGCTGTTGTTGTAGT+TGG 0.433690 8_1:-1996593 Msa1172120:CDS
CGGAAAGCTGGATATTGGTC+CGG 0.433866 8_1:+1998658 None:intergenic
CGAAATAAACGCACAAACAT+AGG 0.435189 8_1:+1993053 None:intergenic
CCTCCAAGTTCTAATGTCAC+TGG 0.435566 8_1:+1991952 None:intergenic
TCAGTTTCAACTACCCTTGA+AGG 0.438416 8_1:+2000610 None:intergenic
ACAAGATGAGTGGGATTGGC+AGG 0.439485 8_1:-1988183 Msa1172120:three_prime_UTR
TGAATGTGGAGGTGGGAGAT+TGG 0.439718 8_1:-1991347 Msa1172120:three_prime_UTR
ATATGACTGGTGAGTTATAC+AGG 0.442126 8_1:+1995934 None:intergenic
ACTGTTCATCTGCGGAAAGC+TGG 0.446588 8_1:+1998646 None:intergenic
CTAATGGTGGAGTCGTAACT+TGG 0.448513 8_1:+1995627 None:intergenic
TAATAAGACGTGCAGAAGCC+AGG 0.448872 8_1:+1997519 None:intergenic
CGTTTATTTCGCTACTATGC+TGG 0.448875 8_1:-1993041 Msa1172120:intron
CGTGTTCGTTTACAGGATAA+AGG 0.449116 8_1:+1998754 None:intergenic
CCGAGGCATCATCGAATACT+TGG 0.450110 8_1:-1998495 Msa1172120:five_prime_UTR
AAGATGTTTACAACCTCAAC+GGG 0.450356 8_1:+1994998 None:intergenic
TTGATCTATTATCCTAGTTA+GGG 0.454802 8_1:-1999969 Msa1172120:five_prime_UTR
TGGAATGGTTAAGTGATATG+AGG 0.456032 8_1:+1999490 None:intergenic
TGGCAGAAGCTAACGGCAGC+AGG 0.456245 8_1:+1999169 None:intergenic
GGGCTGACAGTCCCGGCTGA+TGG 0.456913 8_1:-1992896 Msa1172120:three_prime_UTR
GCACTCTACTTGTGAAGTCT+AGG 0.458273 8_1:+1996874 None:intergenic
ATTATAGATGAACCTTGGTT+AGG 0.458455 8_1:+1998361 None:intergenic
GCACAAGACCAATGGAGGTA+TGG 0.459332 8_1:+1998099 None:intergenic
TGCACCTCTTGCAAGTCATA+TGG 0.459614 8_1:-1992407 Msa1172120:three_prime_UTR
TCTGGCTATGGTCCAACTGC+TGG 0.461907 8_1:-1992430 Msa1172120:three_prime_UTR
GTTGGACCAGCTCTAGCAAC+TGG 0.462042 8_1:-1992782 Msa1172120:three_prime_UTR
GGTTGGGCAGATAAAATTCA+TGG 0.462723 8_1:-1992917 Msa1172120:three_prime_UTR
ATCTGCGGAAAGCTGGATAT+TGG 0.463206 8_1:+1998653 None:intergenic
CAATGGAAAGCTTTATGAAC+AGG 0.463242 8_1:-1993093 Msa1172120:three_prime_UTR
CAATTGGTTCATGCAATGTC+TGG 0.464296 8_1:+1992861 None:intergenic
TTGGTTAATAATGAGTTGAT+TGG 0.464875 8_1:+1997410 None:intergenic
GAGGTAGCTCACACGCTAGC+GGG 0.465063 8_1:+1999678 None:intergenic
CAACTACCCTTGAAGGGTAA+AGG 0.465156 8_1:+2000617 None:intergenic
ATGATGTATGCCATGGGCTC+AGG 0.466061 8_1:-2000526 Msa1172120:five_prime_UTR
TCAAATTAACCTCACAAGAG+TGG 0.466871 8_1:-1994339 Msa1172120:three_prime_UTR
TTGTGCATTCTGTTCACGTA+GGG 0.468396 8_1:+1999442 None:intergenic
GCCTAAAATAGTAACATGTA+TGG 0.469157 8_1:-1999940 Msa1172120:five_prime_UTR
CTTGTTTACCAAGCATTGCC+AGG 0.469501 8_1:-1998147 Msa1172120:five_prime_UTR
ATTGGAGAAGAGGCTGATCT+TGG 0.470363 8_1:-1996138 Msa1172120:CDS
TAGCTTCTTTATACTGCTTG+TGG 0.471142 8_1:-1996203 Msa1172120:CDS
CTCTATGTCTTCTTTACTCT+AGG 0.472457 8_1:-2000306 Msa1172120:five_prime_UTR
CTCGAGATCGTTGTAAATCA+AGG 0.473110 8_1:+1987996 None:intergenic
CTACGCGTGGCTGCACTCTA+CGG 0.473377 8_1:-1999242 Msa1172120:five_prime_UTR
TCAGAGAAAGAACCAATATC+AGG 0.474406 8_1:+2000424 None:intergenic
ATGGTACATTTATACATGTA+TGG 0.474476 8_1:+1995861 None:intergenic
CTCTTCACCTTGTAGAGGAC+TGG 0.474754 8_1:+1999073 None:intergenic
ACCAGAATTTCATAGTCAAC+GGG 0.475029 8_1:+1995715 None:intergenic
TCTTATAAATGGAAAGTTTG+TGG 0.475036 8_1:-1993775 Msa1172120:three_prime_UTR
TGATGAACAAATAAGGAGAC+AGG 0.475665 8_1:-1997472 Msa1172120:five_prime_UTR
ATCCCAAATTCAGAGACATC+CGG 0.476654 8_1:-1999576 Msa1172120:five_prime_UTR
GAAAGGAGTGATGGCTAGGA+TGG 0.476684 8_1:+1997325 None:intergenic
TTGATGCGGGCACTGAGAGC+TGG 0.477197 8_1:-1988262 Msa1172120:three_prime_UTR
CGTGGCACTTCTGTTTGTCG+TGG 0.477971 8_1:+1997551 None:intergenic
TTGATTGGTCCCATCATCCC+GGG 0.478973 8_1:+1997425 None:intergenic
ACATACATTAGCCCTTTGAA+TGG 0.480934 8_1:-1994279 Msa1172120:three_prime_UTR
AAAGATGTGAATCTAACTAA+TGG 0.480966 8_1:+1995611 None:intergenic
CATTTGAAAATACAGTTGGC+TGG 0.481962 8_1:+1991305 None:intergenic
AGCGTATGATCGCATTGGTT+GGG 0.483062 8_1:+1997295 None:intergenic
CGAGCTTTGAGACGTGTTGT+TGG 0.485526 8_1:-1991683 Msa1172120:three_prime_UTR
CATGAACCAATTGGTGTAGC+AGG 0.486086 8_1:-1992851 Msa1172120:three_prime_UTR
CATTCACGTGCTCTCAATCA+TGG 0.487107 8_1:-1994084 Msa1172120:three_prime_UTR
ACCACGCAGGATTGTTTAGT+GGG 0.487590 8_1:+1988107 None:intergenic
ATACGAGAAGCCAACGTATG+AGG 0.488064 8_1:-1998190 Msa1172120:five_prime_UTR
TATTATGCCATGCCAGGCCC+TGG 0.490156 8_1:-2000556 Msa1172120:five_prime_UTR
ACACGTTATGGTTTAGCAGC+AGG 0.491235 8_1:-1988319 Msa1172120:three_prime_UTR
AACCACGCAGGATTGTTTAG+TGG 0.492355 8_1:+1988106 None:intergenic
ATTGGGATGACGTTTGCGGC+AGG 0.492702 8_1:+1994460 None:intergenic
ACCTTTATTATGCTTTGGAA+TGG 0.496226 8_1:+1999475 None:intergenic
TCGAATGATATGAATATCAC+AGG 0.498591 8_1:+1999354 None:intergenic
TTAGGCAGATTTCCCTAACT+AGG 0.498776 8_1:+1999957 None:intergenic
GCAGCAGTGCGTGCTGATCA+TGG 0.498960 8_1:+1999264 None:intergenic
AAACATTGCATCTTAGTAAG+TGG 0.499322 8_1:+2000146 None:intergenic
ATCATGTGAGGACCAGGGCC+TGG 0.500795 8_1:+2000544 None:intergenic
TTTCCACATGCTCCATAAAA+GGG 0.500992 8_1:-1998989 Msa1172120:five_prime_UTR
TCTCGGTGGTGTATAGGGTC+AGG 0.501163 8_1:+1998325 None:intergenic
TTTGAAACCCATACCTCCAT+TGG 0.501606 8_1:-1998107 Msa1172120:five_prime_UTR
CCTACTGATATCAGCTCCTT+CGG 0.502141 8_1:-1999145 Msa1172120:five_prime_UTR
ATTAAACTCAACCTTTGAGT+TGG 0.503132 8_1:-1999640 Msa1172120:five_prime_UTR
CTTCAAAATGTAGATTACTA+AGG 0.503284 8_1:+1996906 None:intergenic
TTGTTCATCATTTGTGCGGA+GGG 0.503471 8_1:+1997485 None:intergenic
CCTCTCCACCTTCCAAATCA+AGG 0.504077 8_1:-1998566 Msa1172120:five_prime_UTR
GAGAATTGGGATGACGTTTG+CGG 0.504244 8_1:+1994456 None:intergenic
CATCCTCTTTGTCATGGCAG+AGG 0.504504 8_1:+1999289 None:intergenic
GGAAAGCTGGATATTGGTCC+GGG 0.505674 8_1:+1998659 None:intergenic
GCATACATCATGTGAGGACC+AGG 0.507211 8_1:+2000538 None:intergenic
ATGGTTCATCCTCTTTGTCA+TGG 0.507720 8_1:+1999283 None:intergenic
GCTTTCAACCTGGCAATGCT+TGG 0.508051 8_1:+1998139 None:intergenic
AACCAAAGCATTATCTAGAA+TGG 0.508665 8_1:-1997192 Msa1172120:five_prime_UTR
TTGTGTGTTTGCTTAATTGG+TGG 0.509476 8_1:-1996566 Msa1172120:CDS
CTGGGCTTACCATCGATGAT+TGG 0.509739 8_1:+1997809 None:intergenic
GGTGGGAGATTGGGTTCAAA+AGG 0.509767 8_1:-1991337 Msa1172120:three_prime_UTR
GTGTTTATGAAGAAGAAAAG+AGG 0.510086 8_1:+2000279 None:intergenic
CTTATTCTTGTCTCATAAGG+TGG 0.512072 8_1:-1996959 Msa1172120:five_prime_UTR
CCAACACTTGATCCACGTAC+AGG 0.512202 8_1:-1993397 Msa1172120:three_prime_UTR
GTTGATTGGTCCCATCATCC+CGG 0.512582 8_1:+1997424 None:intergenic
AGTGCCACGAAGGTCGCCCC+TGG 0.513040 8_1:-1997537 Msa1172120:five_prime_UTR
TTATCACCATAATCATTACA+AGG 0.513164 8_1:-1994131 Msa1172120:three_prime_UTR
TACACTAATACTATTCTACT+AGG 0.513374 8_1:-1997001 Msa1172120:five_prime_UTR
TGTTGGTGATCCATTTAAGA+AGG 0.513847 8_1:-1991666 Msa1172120:three_prime_UTR
TATGGAGCATGTGGAAACAT+AGG 0.514039 8_1:+1998995 None:intergenic
CAAATTAACCTCACAAGAGT+GGG 0.514040 8_1:-1994338 Msa1172120:three_prime_UTR
CTAGGCACCGGTAAGTATCT+GGG 0.514049 8_1:+1997791 None:intergenic
ACGTGAACAGAATGCACAAC+CGG 0.516349 8_1:-1999438 Msa1172120:five_prime_UTR
TTGAGCACTGGTTGGTGGCA+AGG 0.518236 8_1:-1996632 Msa1172120:CDS
CTCATCTTGTAACCACCAAA+AGG 0.518735 8_1:+1988196 None:intergenic
GTATAATTTATTGAAACTTG+TGG 0.518958 8_1:+1993804 None:intergenic
CAAGCAGTATAAAGAAGCTA+TGG 0.519124 8_1:+1996206 None:intergenic
TTTCAAGGTTAATATCATCA+TGG 0.519456 8_1:+1997168 None:intergenic
AACCAGAATTTCATAGTCAA+CGG 0.519626 8_1:+1995714 None:intergenic
CACAAGACCAATGGAGGTAT+GGG 0.521591 8_1:+1998100 None:intergenic
TTGCTTCAATTTACAGAGCA+TGG 0.521785 8_1:+1995842 None:intergenic
AAGTTTGTGGATGCTGCATC+AGG 0.521889 8_1:-1993762 Msa1172120:intron
TCACAAACTACACAATTCAT+GGG 0.523485 8_1:-1998787 Msa1172120:five_prime_UTR
TAGCTATTACTAAGTCATCA+AGG 0.523524 8_1:+2000710 None:intergenic
TGTAGATGAGTGTGTGGTGT+GGG 0.523690 8_1:+2000467 None:intergenic
ACAGAATGCACAACCGGTAA+AGG 0.525297 8_1:-1999432 Msa1172120:five_prime_UTR
AAGTTTGTCTTTCCATTAAG+CGG 0.525365 8_1:+1994406 None:intergenic
TTGCCAACGCGCATCTATTG+CGG 0.525490 8_1:+1998410 None:intergenic
GCAAGAGGTGCACCAGCAGT+TGG 0.526586 8_1:+1992418 None:intergenic
GAAGCCAGGGGCGACCTTCG+TGG 0.526910 8_1:+1997533 None:intergenic
TAGCACCGCTGCAGCTGTTG+AGG 0.527020 8_1:-1993838 Msa1172120:three_prime_UTR
ACATTTATACATGTATGGTA+TGG 0.527217 8_1:+1995866 None:intergenic
GTGTTTGTTCAGAAGTCTTG+AGG 0.527461 8_1:+1992747 None:intergenic
GACGTTATACACAAACCATA+AGG 0.527927 8_1:+1996081 None:intergenic
AGACGGAATGGCTTGCAAAA+CGG 0.528285 8_1:-1997942 Msa1172120:five_prime_UTR
GGTAGCTCATATGGTTTGCA+AGG 0.528678 8_1:+1994672 None:intergenic
CACTTGAATCTGCCTTGATG+AGG 0.529661 8_1:-1999312 Msa1172120:five_prime_UTR
CTATAGAAAATCTCGGACTT+CGG 0.530019 8_1:-1997707 Msa1172120:five_prime_UTR
GCCACAACTAGAGCCGTTAG+CGG 0.530174 8_1:+1992725 None:intergenic
CAGTGCCCGCATCAAAGTGT+TGG 0.531776 8_1:+1988270 None:intergenic
AATTCATGGGCTGACAGTCC+CGG 0.531987 8_1:-1992903 Msa1172120:three_prime_UTR
TACGCTCATGTACGAAGGTA+CGG 0.532200 8_1:+1991738 None:intergenic
GCTCAAAATCCAAGTGTACA+TGG 0.532341 8_1:+1996649 None:intergenic
AGCTAACCTAGTAATCAGAT+TGG 0.532800 8_1:+1995976 None:intergenic
AAGCGTATGATCGCATTGGT+TGG 0.534369 8_1:+1997294 None:intergenic
ATTTGGAAGGTGGAGAGGAA+CGG 0.536105 8_1:+1998571 None:intergenic
CCATGCTCCAGTCCTCTACA+AGG 0.536759 8_1:-1999080 Msa1172120:five_prime_UTR
GTGAAAGTTCCTGCACCAAA+AGG 0.537227 8_1:-1998942 Msa1172120:five_prime_UTR
TATGACTGAACCTCATACGT+TGG 0.537349 8_1:+1998180 None:intergenic
TGAACATTTGAAAATACAGT+TGG 0.537593 8_1:+1991301 None:intergenic
ACAAATTTCAGTCATTGAGA+AGG 0.538008 8_1:+1995235 None:intergenic
GATGTAATCAGCAACGGTAG+AGG 0.539794 8_1:+2000366 None:intergenic
AGCAAGTGTCTCTCTAAAGC+GGG 0.540155 8_1:+1997899 None:intergenic
TTGTAAAATGGCTGCAGCCG+AGG 0.540625 8_1:-1998512 Msa1172120:five_prime_UTR
AGATTGCAGCTCTGGAGGCA+TGG 0.541033 8_1:-1993118 Msa1172120:three_prime_UTR
TCTTGTGAGGTTAATTTGAA+GGG 0.541175 8_1:+1994343 None:intergenic
TCTAGATTCTTCTCTCTCCA+AGG 0.541291 8_1:-2000254 Msa1172120:intron
AACAATTTGAGAAAGTACTT+AGG 0.541343 8_1:-1991405 Msa1172120:three_prime_UTR
TGCACAATTAGAGTTAGTAC+AGG 0.541424 8_1:-1998905 Msa1172120:five_prime_UTR
TGTAGTTTGTGATGGACCTT+CGG 0.541741 8_1:+1998798 None:intergenic
AGTGGCGCAGGTTGTAGATA+GGG 0.541766 8_1:+1999050 None:intergenic
CACAGCCAACACTTTGATGC+GGG 0.542231 8_1:-1988275 Msa1172120:three_prime_UTR
ATGAATTGTGTAGTTTGTGA+TGG 0.542890 8_1:+1998790 None:intergenic
ACATGATAATCTCCATCAGC+CGG 0.543115 8_1:+1992884 None:intergenic
GCTACACTTGAATGTGGAGG+TGG 0.543793 8_1:-1991355 Msa1172120:three_prime_UTR
CTTGCATTTCACCAACTCAA+AGG 0.544197 8_1:+1999629 None:intergenic
TCCTCACATGATGTATGCCA+TGG 0.544301 8_1:-2000533 Msa1172120:five_prime_UTR
CACTCTACTTGTGAAGTCTA+GGG 0.544456 8_1:+1996875 None:intergenic
GTTCCTTTGCGGTGCAGGTG+TGG 0.544638 8_1:+1998848 None:intergenic
AAGATAATGATGTAGTAGAA+AGG 0.545048 8_1:+2000337 None:intergenic
AGGCCAAGGTCCATTATCAA+AGG 0.545871 8_1:+1993303 None:intergenic
TTCTGAACAAACACCGCTAA+CGG 0.546209 8_1:-1992738 Msa1172120:three_prime_UTR
TCTCTGCTTCGCTCACCACT+AGG 0.546648 8_1:-1993996 Msa1172120:intron
ATTCTACTAGGTTTCAACTC+TGG 0.546902 8_1:-1996989 Msa1172120:five_prime_UTR
GTATTACCAGTTGCTAGAGC+TGG 0.547936 8_1:+1992776 None:intergenic
GTTAATGTTATAAGGACTTG+AGG 0.548010 8_1:+1995681 None:intergenic
TAATGATGTAGTAGAAAGGA+TGG 0.548723 8_1:+2000341 None:intergenic
AGACCTTACCGCTTTCAACC+TGG 0.549196 8_1:+1998129 None:intergenic
ACCTCAGGAAGAAAATCTGA+AGG 0.549242 8_1:-1993882 Msa1172120:intron
AATAAGACGTGCAGAAGCCA+GGG 0.549473 8_1:+1997520 None:intergenic
CCGTCCAGCAATTGGAGAAG+AGG 0.549915 8_1:-1996148 Msa1172120:CDS
CAGACATTGCATGAACCAAT+TGG 0.550440 8_1:-1992860 Msa1172120:three_prime_UTR
TTGGTGGTTACAAGATGAGT+GGG 0.550811 8_1:-1988192 Msa1172120:three_prime_UTR
AGGGAATAAACCCGGACGTA+TGG 0.550827 8_1:+1994480 None:intergenic
GCATCCTCACAAACGATGAA+AGG 0.551646 8_1:+1991922 None:intergenic
AAGAACGGTTACCAAACAAA+TGG 0.552439 8_1:-1994205 Msa1172120:three_prime_UTR
CCAAGTATTCGATGATGCCT+CGG 0.552973 8_1:+1998495 None:intergenic
TCTCTACCTTTACCCTTCAA+GGG 0.553235 8_1:-2000623 Msa1172120:five_prime_UTR
TTAACTCTCAATGGATTCAG+TGG 0.553861 8_1:+1997351 None:intergenic
GGAAAACAACCATGTACACT+TGG 0.554146 8_1:-1996658 Msa1172120:exon
TGTTTAACATCACATATGAC+TGG 0.554217 8_1:+1995921 None:intergenic
ATATTGGTTCTTTCTCTGAG+TGG 0.555084 8_1:-2000420 Msa1172120:five_prime_UTR
GCTACTTATGAAGCAGCGTC+CGG 0.555153 8_1:+1997668 None:intergenic
AGTGATTATTATGCCATGCC+AGG 0.555924 8_1:-2000562 Msa1172120:five_prime_UTR
TTCTCGATGCACAAGACCAA+TGG 0.556058 8_1:+1998091 None:intergenic
CGTGTCGGAAACAGTGGCGC+AGG 0.556368 8_1:+1999038 None:intergenic
TAGACTGCATGACTTGCGCC+TGG 0.556925 8_1:-1997640 Msa1172120:five_prime_UTR
CTTTATCCTGTAAACGAACA+CGG 0.558047 8_1:-1998753 Msa1172120:five_prime_UTR
GTGAGGACCAGGGCCTGGCA+TGG 0.558269 8_1:+2000549 None:intergenic
TCCCTATTATAGATGAACCT+TGG 0.558962 8_1:+1998356 None:intergenic
CAGTCTTCACAACTATCTGC+AGG 0.559138 8_1:-1988146 Msa1172120:three_prime_UTR
CCTTGATTTGGAAGGTGGAG+AGG 0.560229 8_1:+1998566 None:intergenic
TGTTCACGTAGGGGAAGCTA+TGG 0.560590 8_1:+1999452 None:intergenic
TTATTTGTTCATCATTTGTG+CGG 0.561371 8_1:+1997481 None:intergenic
GTGTAGATGAGTGTGTGGTG+TGG 0.562096 8_1:+2000466 None:intergenic
TGTGGCAGAAAATTAATACT+TGG 0.562186 8_1:+1997873 None:intergenic
CAACACTTGATCCACGTACA+GGG 0.562743 8_1:-1993396 Msa1172120:three_prime_UTR
ATCGCCTTTCATCGTTTGTG+AGG 0.563181 8_1:-1991926 Msa1172120:three_prime_UTR
CGGTAAACTTATCGATTGGC+CGG 0.563363 8_1:-1997687 Msa1172120:five_prime_UTR
CGCGAGCTGCTGATACTGCA+CGG 0.563681 8_1:+1993329 None:intergenic
ACTTCGGTAAACTTATCGAT+TGG 0.563878 8_1:-1997691 Msa1172120:five_prime_UTR
ACGAGGTACATAAGAATAAG+TGG 0.564244 8_1:-1999727 Msa1172120:five_prime_UTR
GAAACTATATTCAGAACACC+TGG 0.565262 8_1:+1992451 None:intergenic
ACCGCTAACGGCTCTAGTTG+TGG 0.565705 8_1:-1992726 Msa1172120:three_prime_UTR
TAAGATGTTTACAACCTCAA+CGG 0.566617 8_1:+1994997 None:intergenic
GATGAACCTTGGTTAGGCAA+TGG 0.566904 8_1:+1998367 None:intergenic
CAATTTGGTGATGTTATAGG+AGG 0.567655 8_1:-1994810 Msa1172120:three_prime_UTR
CTAGAGTAAAGAAGACATAG+AGG 0.567806 8_1:+2000307 None:intergenic
AGGTTCATCTATAATAGGGA+TGG 0.569451 8_1:-1998353 Msa1172120:five_prime_UTR
TAGTATTAGTATTCATGGAG+TGG 0.569678 8_1:-1997229 Msa1172120:five_prime_UTR
ATAAAAGGGCAGCAAAATGT+TGG 0.570178 8_1:-1998975 Msa1172120:five_prime_UTR
ACTTCAAGATTGTCTGAACT+GGG 0.570498 8_1:+1991144 None:intergenic
ACCTAGTAATCAGATTGGAC+TGG 0.571069 8_1:+1995981 None:intergenic
AAGTCATATGGATGTGGACA+AGG 0.571259 8_1:-1992395 Msa1172120:intron
GTTCATGCTGTTCTAGGCAC+CGG 0.571334 8_1:+1997779 None:intergenic
CCTGTACGTGGATCAAGTGT+TGG 0.571586 8_1:+1993397 None:intergenic
TCCCAAATTCAGAGACATCC+GGG 0.571815 8_1:-1999575 Msa1172120:five_prime_UTR
TGCAGTATCAGCAGCTCGCG+AGG 0.571861 8_1:-1993326 Msa1172120:three_prime_UTR
AGGTAGCTCACACGCTAGCG+GGG 0.572201 8_1:+1999679 None:intergenic
GCATATTTATATGCGAGGGT+CGG 0.572322 8_1:-1994921 Msa1172120:three_prime_UTR
AGGCCTTTGATAATGGACCT+TGG 0.572993 8_1:-1993306 Msa1172120:three_prime_UTR
TAATCGGAGACAAGCGAATG+AGG 0.573728 8_1:+1999659 None:intergenic
ATCCTGTAAACGAACACGGG+TGG 0.574158 8_1:-1998749 Msa1172120:five_prime_UTR
CATGGAGTGGATAACTTCGA+TGG 0.574605 8_1:-1997216 Msa1172120:five_prime_UTR
TTTGTTCATCATTTGTGCGG+AGG 0.574814 8_1:+1997484 None:intergenic
AGTAAAGCGTATGATCGCAT+TGG 0.575096 8_1:+1997290 None:intergenic
TTGGGATGACGTTTGCGGCA+GGG 0.576224 8_1:+1994461 None:intergenic
GTGCAGGTGTGGATTCGAGC+TGG 0.576328 8_1:+1998859 None:intergenic
TTCACTGGATCGACAGACAC+CGG 0.576784 8_1:-1992015 Msa1172120:three_prime_UTR
AAGCCAGTGACATTAGAACT+TGG 0.577070 8_1:-1991955 Msa1172120:three_prime_UTR
TAAACACAAGCCTGAGCCCA+TGG 0.578077 8_1:+2000516 None:intergenic
CTAATTTGGCGTATGTGTAG+AGG 0.579133 8_1:+1998718 None:intergenic
AGGAGCTGATATCAGTAGGT+TGG 0.579176 8_1:+1999149 None:intergenic
GATGTGAATCTAACTAATGG+TGG 0.579402 8_1:+1995614 None:intergenic
CTAACAATCGAGGTATTCAC+TGG 0.579543 8_1:+1998053 None:intergenic
TGATGAGATTGCAGCTCTGG+AGG 0.579914 8_1:-1993123 Msa1172120:three_prime_UTR
CAATTCCTCAACAGCTGCAG+CGG 0.580076 8_1:+1993833 None:intergenic
TGTTCATCATTTGTGCGGAG+GGG 0.581281 8_1:+1997486 None:intergenic
ACCTGAAAGGAGTGATGGCT+AGG 0.581317 8_1:+1997321 None:intergenic
CAGTTTCAACTACCCTTGAA+GGG 0.581339 8_1:+2000611 None:intergenic
GTAAACGAACACGGGTGGGA+AGG 0.581722 8_1:-1998744 Msa1172120:five_prime_UTR
AAAATACTCATGATATAAGA+CGG 0.582224 8_1:-1997959 Msa1172120:five_prime_UTR
ATGAACAAATAAGGAGACAG+GGG 0.583520 8_1:-1997470 Msa1172120:five_prime_UTR
TGTTTAACCACCGTCAGTAA+CGG 0.583941 8_1:-2000499 Msa1172120:five_prime_UTR
ACGCTCATGTACGAAGGTAC+GGG 0.584337 8_1:+1991739 None:intergenic
ACTCATGATATAAGACGGAA+TGG 0.584600 8_1:-1997954 Msa1172120:five_prime_UTR
CAATGCTTGGTAAACAAGCA+TGG 0.585149 8_1:+1998152 None:intergenic
TCTTGCAAGTCATATGGATG+TGG 0.585216 8_1:-1992401 Msa1172120:three_prime_UTR
CAAAGTAAACACGGTTAACG+TGG 0.586692 8_1:+1996024 None:intergenic
GTAGCTCATATGGTTTGCAA+GGG 0.586936 8_1:+1994673 None:intergenic
GGTTACAAGATGAGTGGGAT+TGG 0.587246 8_1:-1988187 Msa1172120:three_prime_UTR
TTTGGTGGTTACAAGATGAG+TGG 0.587661 8_1:-1988193 Msa1172120:three_prime_UTR
CATGTGTATACGCGATGAAG+AGG 0.587970 8_1:+1999383 None:intergenic
AACAGTGGACTACTCTGTGT+TGG 0.589024 8_1:+1997391 None:intergenic
TCCTGTAAACGAACACGGGT+GGG 0.590652 8_1:-1998748 Msa1172120:five_prime_UTR
GTTGTGCATTCTGTTCACGT+AGG 0.590680 8_1:+1999441 None:intergenic
TTATTGTTAGAGGAGGATCT+CGG 0.592508 8_1:+1998308 None:intergenic
GCTCTGGAGGCATGGAACAA+TGG 0.593860 8_1:-1993110 Msa1172120:three_prime_UTR
TTCATACTCATTCTAAGACG+TGG 0.594268 8_1:+1998455 None:intergenic
TAACCACCGTCAGTAACGGC+AGG 0.595415 8_1:-2000495 Msa1172120:five_prime_UTR
GGACTACCTGAAAGGAGTGA+TGG 0.595530 8_1:+1997316 None:intergenic
TCAGTCACTTGCTCAATCAA+GGG 0.596571 8_1:-1998538 Msa1172120:five_prime_UTR
CATGATAATCTCCATCAGCC+GGG 0.597998 8_1:+1992885 None:intergenic
TAGCAGGACAAATTATACCT+TGG 0.599069 8_1:-1992835 Msa1172120:three_prime_UTR
TCTTCGGCTATAGAAAATCT+CGG 0.599339 8_1:-1997714 Msa1172120:five_prime_UTR
TGAGTTCTTGGAGAAATCAA+AGG 0.600349 8_1:-1991708 Msa1172120:three_prime_UTR
CAACTACAACAACAGCATCT+GGG 0.601171 8_1:+1996594 None:intergenic
AAGATTAATATCAACAAGAA+CGG 0.601538 8_1:-1994220 Msa1172120:three_prime_UTR
CCGAAGGAGCTGATATCAGT+AGG 0.601964 8_1:+1999145 None:intergenic
TTTAAGAAGGGTGTAGAGCA+AGG 0.602977 8_1:-1991653 Msa1172120:three_prime_UTR
TCACTTTCCCCACTCTTGTG+AGG 0.604131 8_1:+1994330 None:intergenic
CCTCTTCTCCAATTGCTGGA+CGG 0.604419 8_1:+1996148 None:intergenic
TTGCCAGGTTGAAAGCGGTA+AGG 0.604606 8_1:-1998132 Msa1172120:five_prime_UTR
TTGGTCCCATCATCCCGGGG+CGG 0.605919 8_1:+1997429 None:intergenic
TGTGGATTCGAGCTGGAATG+TGG 0.606465 8_1:+1998866 None:intergenic
AAAGCTTTGGCAAGACGTGT+CGG 0.606606 8_1:+1999023 None:intergenic
CATTGATGAAGTGATACGAC+GGG 0.606740 8_1:-1988350 Msa1172120:three_prime_UTR
TTCCAAGCAAACATAAGTAG+AGG 0.607329 8_1:+1992806 None:intergenic
CCTCACATGATGTATGCCAT+GGG 0.607440 8_1:-2000532 Msa1172120:five_prime_UTR
ATATTTGGCAGTACAGCGAA+AGG 0.607718 8_1:-1995038 Msa1172120:three_prime_UTR
ATAAGTAGAGGAAAATTCCA+AGG 0.608554 8_1:+1992818 None:intergenic
AGATGCCTTGATTTGGAAGG+TGG 0.609958 8_1:+1998561 None:intergenic
CCGGACGTATGGAGAAAAGC+GGG 0.610106 8_1:+1994491 None:intergenic
TCTCCAATTGCTGGACGGCG+CGG 0.610297 8_1:+1996153 None:intergenic
ATTGGTTGGGACTACCTGAA+AGG 0.610843 8_1:+1997308 None:intergenic
AATCCACACCTGCACCGCAA+AGG 0.611050 8_1:-1998851 Msa1172120:five_prime_UTR
GCAAGACGTGTCGGAAACAG+TGG 0.611496 8_1:+1999032 None:intergenic
GTTGGTGATCCATTTAAGAA+GGG 0.612396 8_1:-1991665 Msa1172120:three_prime_UTR
TATTGCATATTTATATGCGA+GGG 0.612733 8_1:-1994925 Msa1172120:three_prime_UTR
ATGTGTATACGCGATGAAGA+GGG 0.613529 8_1:+1999384 None:intergenic
CAGTGACATTAGAACTTGGA+GGG 0.613710 8_1:-1991951 Msa1172120:three_prime_UTR
ACTAATACTAGAATTGCTGA+TGG 0.614636 8_1:+1997242 None:intergenic
CCAGTGACATTAGAACTTGG+AGG 0.615553 8_1:-1991952 Msa1172120:three_prime_UTR
TTCAGAAGTCTTGAGGACAA+TGG 0.616209 8_1:+1992754 None:intergenic
ATAGTAGAAATAATATTCGA+TGG 0.616445 8_1:-1997989 Msa1172120:five_prime_UTR
ATTCCGCAATAGATGCGCGT+TGG 0.616529 8_1:-1998413 Msa1172120:five_prime_UTR
AGTAGGTTGGCAGAAGCTAA+CGG 0.617979 8_1:+1999162 None:intergenic
ATATTGCATATTTATATGCG+AGG 0.618993 8_1:-1994926 Msa1172120:three_prime_UTR
CCTTGTAGAGGACTGGAGCA+TGG 0.619118 8_1:+1999080 None:intergenic
GCTAAACCTGCCGTTACTGA+CGG 0.620854 8_1:+2000489 None:intergenic
AAGTGCCTACAGACTTTGTG+TGG 0.623018 8_1:+1998609 None:intergenic
TGTGCATTCTGTTCACGTAG+GGG 0.623781 8_1:+1999443 None:intergenic
AACTATATTCAGAACACCTG+GGG 0.624850 8_1:+1992453 None:intergenic
CATATATGTCAAAGTAAACA+CGG 0.625213 8_1:+1996015 None:intergenic
CAGCAAGTGTCTCTCTAAAG+CGG 0.626204 8_1:+1997898 None:intergenic
GCAATCACTTCCCCTGTACG+TGG 0.626671 8_1:+1993385 None:intergenic
TCTCTCTAAAGCGGGTCGAG+AGG 0.627225 8_1:+1997907 None:intergenic
TTTGCTCCATTGCCTAACCA+AGG 0.627303 8_1:-1998373 Msa1172120:five_prime_UTR
CAAACCATATGATATGCAAG+TGG 0.627464 8_1:+1994718 None:intergenic
AGAAATAACTAACTGTGCTG+TGG 0.630103 8_1:+2000648 None:intergenic
TCATGGCAGAGGCCTCATCA+AGG 0.630180 8_1:+1999300 None:intergenic
GTTGGGCAGATAAAATTCAT+GGG 0.630864 8_1:-1992916 Msa1172120:three_prime_UTR
AAAGGAGTGATGGCTAGGAT+GGG 0.631060 8_1:+1997326 None:intergenic
CTACACTTGAATGTGGAGGT+GGG 0.631427 8_1:-1991354 Msa1172120:three_prime_UTR
TAATGGTGTAGATGAGTGTG+TGG 0.631574 8_1:+2000461 None:intergenic
GACTTGCGCCTGGTTCTCAG+TGG 0.632275 8_1:-1997630 Msa1172120:five_prime_UTR
GATGAACAAATAAGGAGACA+GGG 0.632944 8_1:-1997471 Msa1172120:five_prime_UTR
TGTGGCAAAACTACTTCATG+AGG 0.633494 8_1:-1992708 Msa1172120:intron
CTGTCAGAAAAGTATTATTG+GGG 0.633980 8_1:-1998231 Msa1172120:five_prime_UTR
CGATTTCTACCAATCATCGA+TGG 0.634661 8_1:-1997818 Msa1172120:five_prime_UTR
TTTATCCTGTAAACGAACAC+GGG 0.634759 8_1:-1998752 Msa1172120:five_prime_UTR
AGGCCTCTGCCATGACAAAG+AGG 0.635204 8_1:-1999292 Msa1172120:five_prime_UTR
TCGATGCACAAGACCAATGG+AGG 0.635550 8_1:+1998094 None:intergenic
CAAGGACAAGAAACACCGAC+AGG 0.635709 8_1:-1994113 Msa1172120:three_prime_UTR
TGAAGATGCCTTGATTTGGA+AGG 0.637377 8_1:+1998558 None:intergenic
AGCAGCGCTACACTTGAATG+TGG 0.637842 8_1:-1991361 Msa1172120:three_prime_UTR
AGCAGCAACAACATGTCCGA+AGG 0.639440 8_1:+1999129 None:intergenic
GTCGAAGAGACTTCTACAAG+CGG 0.642558 8_1:-1999607 Msa1172120:five_prime_UTR
TAGGGCTCTTCACCTTGTAG+AGG 0.642864 8_1:+1999068 None:intergenic
TGGTGAGTTATACAGGTGAC+TGG 0.643263 8_1:+1995941 None:intergenic
CGGGAAGAAGACAAACACAA+AGG 0.644162 8_1:+1994510 None:intergenic
TAGAATTGCTGATGGTAGTG+TGG 0.644635 8_1:+1997250 None:intergenic
TGAGGTAGCTCACACGCTAG+CGG 0.646044 8_1:+1999677 None:intergenic
GCACGCACTGCTGCTACGCG+TGG 0.646294 8_1:-1999255 Msa1172120:five_prime_UTR
GCACAGCCAACACTTTGATG+CGG 0.647986 8_1:-1988276 Msa1172120:three_prime_UTR
CAAGATGAGTGGGATTGGCA+GGG 0.649063 8_1:-1988182 Msa1172120:three_prime_UTR
AAAAGCAGATGGGTGACTGG+TGG 0.649436 8_1:-1997578 Msa1172120:five_prime_UTR
GACGATGTGTGTCGAAACAG+TGG 0.650015 8_1:+1997376 None:intergenic
ATGGTGGATGTAATCAGCAA+CGG 0.650760 8_1:+2000360 None:intergenic
CTATCTGCAGGTAAAAGCTG+TGG 0.651181 8_1:-1988134 Msa1172120:three_prime_UTR
CTCCTCCACACAAAGTCTGT+AGG 0.651239 8_1:-1998614 Msa1172120:five_prime_UTR
CACGGTGGGTCTAACAATCG+AGG 0.652697 8_1:+1998043 None:intergenic
GACAAACAGAAGTGCCACGA+AGG 0.654205 8_1:-1997547 Msa1172120:five_prime_UTR
TAGGAAGAGTTGTAACAACA+CGG 0.656258 8_1:+1996747 None:intergenic
ACATCCATATGACTTGCAAG+AGG 0.657822 8_1:+1992403 None:intergenic
ATATACGAGGACAACTTAGA+CGG 0.658882 8_1:+1995258 None:intergenic
GTCTAACAAAACACCTGTTG+AGG 0.658965 8_1:+1996534 None:intergenic
GTCATAATCCAAGTTACGCG+TGG 0.660061 8_1:+1998263 None:intergenic
AAACTATATTCAGAACACCT+GGG 0.660081 8_1:+1992452 None:intergenic
TGATGTAGTAGAAAGGATGG+TGG 0.660817 8_1:+2000344 None:intergenic
TTTAACAAACTCTGTCGGAG+AGG 0.661436 8_1:-1997078 Msa1172120:five_prime_UTR
AACACTTGATCCACGTACAG+GGG 0.661807 8_1:-1993395 Msa1172120:three_prime_UTR
ACATGATGTAGATCTTCCGA+AGG 0.663916 8_1:-1998814 Msa1172120:five_prime_UTR
GTGATTGCTAATGTTGCTGA+AGG 0.664610 8_1:-1993370 Msa1172120:three_prime_UTR
CCTCAGGAAGAAAATCTGAA+GGG 0.666887 8_1:-1993881 Msa1172120:intron
GGTAGCTCACACGCTAGCGG+GGG 0.667050 8_1:+1999680 None:intergenic
TACAATAGTTACAACCACGC+AGG 0.667386 8_1:+1988094 None:intergenic
AAGCATTGCCAGGTTGAAAG+CGG 0.669451 8_1:-1998137 Msa1172120:five_prime_UTR
TTCTAAGACGTGGAACGTGG+AGG 0.670130 8_1:+1998465 None:intergenic
TCATTCTAAGACGTGGAACG+TGG 0.671082 8_1:+1998462 None:intergenic
CTTATGTTAAAGATCGCGTG+TGG 0.671451 8_1:+1997855 None:intergenic
CCCATGGCATACATCATGTG+AGG 0.671661 8_1:+2000532 None:intergenic
GTGGATTCGAGCTGGAATGT+GGG 0.675139 8_1:+1998867 None:intergenic
ACGTGAATGTGATTGCCTGT+CGG 0.675313 8_1:+1994098 None:intergenic
AGCGCTACACTTGAATGTGG+AGG 0.676101 8_1:-1991358 Msa1172120:three_prime_UTR
TGATTGACACTGTTCATCTG+CGG 0.677814 8_1:+1998638 None:intergenic
GGTGGGACTAGCTAATAATG+TGG 0.679011 8_1:-1999706 Msa1172120:five_prime_UTR
CCCGGACGTATGGAGAAAAG+CGG 0.679099 8_1:+1994490 None:intergenic
CACTGAGAGCTGGAACAGTG+TGG 0.679723 8_1:-1988252 Msa1172120:three_prime_UTR
GGTACATAAGAATAAGTGGT+GGG 0.680028 8_1:-1999723 Msa1172120:five_prime_UTR
TGCCTACAGACTTTGTGTGG+AGG 0.685848 8_1:+1998612 None:intergenic
ACATTGATGAAGTGATACGA+CGG 0.686641 8_1:-1988351 Msa1172120:three_prime_UTR
TTGTTAGAGGAGGATCTCGG+TGG 0.688005 8_1:+1998311 None:intergenic
TAGCTCATATGGTTTGCAAG+GGG 0.691059 8_1:+1994674 None:intergenic
AAATTAACCTCACAAGAGTG+GGG 0.693775 8_1:-1994337 Msa1172120:three_prime_UTR
AAACCTGCCGTTACTGACGG+TGG 0.697277 8_1:+2000492 None:intergenic
TTTGCGGCAGGGAATAAACC+CGG 0.697611 8_1:+1994472 None:intergenic
TGATTGGTCCCATCATCCCG+GGG 0.697637 8_1:+1997426 None:intergenic
CACAAACTACACAATTCATG+GGG 0.697846 8_1:-1998786 Msa1172120:five_prime_UTR
ATAGATACGCTCATGTACGA+AGG 0.703638 8_1:+1991733 None:intergenic
CTTGGACTCTAAAACTACAG+TGG 0.709020 8_1:+1999533 None:intergenic
CCCCACTAAACAATCCTGCG+TGG 0.713685 8_1:-1988108 Msa1172120:three_prime_UTR
CCACGCAGGATTGTTTAGTG+GGG 0.720413 8_1:+1988108 None:intergenic
AGGTACATAAGAATAAGTGG+TGG 0.724316 8_1:-1999724 Msa1172120:five_prime_UTR
ATAAGACGTGCAGAAGCCAG+GGG 0.726600 8_1:+1997521 None:intergenic
CATACATCATGTGAGGACCA+GGG 0.732305 8_1:+2000539 None:intergenic
TGAACAAATAAGGAGACAGG+GGG 0.733372 8_1:-1997469 Msa1172120:five_prime_UTR
ACTATATTCAGAACACCTGG+GGG 0.743292 8_1:+1992454 None:intergenic
GTCATTGAGAAGGATATACG+AGG 0.746691 8_1:+1995245 None:intergenic
ATAAGGTGTTCAATACAACG+AGG 0.832814 8_1:-1999744 Msa1172120:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATATTTTATATTAATAT+AGG - chr8_1:2000169-2000188 Msa1172120:intron 0.0%
!!! TTATATTTTATATTAATATA+GGG - chr8_1:2000170-2000189 Msa1172120:intron 0.0%
!!! ATTTTTTTTTTCTTATTGTA+AGG - chr8_1:1993119-1993138 Msa1172120:three_prime_UTR 10.0%
!! AAATTTGTCAAAAAAAAAAA+TGG + chr8_1:1993146-1993165 None:intergenic 10.0%
!!! TTTTTTTTTGACAAATTTTA+AGG - chr8_1:1993148-1993167 Msa1172120:three_prime_UTR 10.0%
!!! TAAATACAAACATTTTTTAA+TGG + chr8_1:1993351-1993370 None:intergenic 10.0%
!! ATTAAAAAATGTTTGTATTT+AGG - chr8_1:1993350-1993369 Msa1172120:three_prime_UTR 10.0%
!! TAGTAGTTTAAAAAAAAAAT+AGG - chr8_1:1993416-1993435 Msa1172120:intron 10.0%
!!! ATTTTTATGTATTTATTAAG+AGG + chr8_1:1993910-1993929 None:intergenic 10.0%
!! AATAAAGAATTTAATAACTA+AGG + chr8_1:2000080-2000099 None:intergenic 10.0%
!! CAAAGATTAAAAATCTAATT+TGG + chr8_1:1989843-1989862 None:intergenic 15.0%
!!! CAAATTAGATTTTTAATCTT+TGG - chr8_1:1989841-1989860 Msa1172120:intron 15.0%
!! AATTATGTACAGATTTAAAA+AGG + chr8_1:1991432-1991451 None:intergenic 15.0%
!! AACATGAATTTAACTAAAAT+TGG - chr8_1:1992642-1992661 Msa1172120:intron 15.0%
!!! TCTAAATTTTTATTCTTCAA+TGG + chr8_1:1993098-1993117 None:intergenic 15.0%
!!! AAATATAAGTTCATTTTTTG+TGG + chr8_1:1993492-1993511 None:intergenic 15.0%
!! ACAAAAAATGAACTTATATT+TGG - chr8_1:1993491-1993510 Msa1172120:intron 15.0%
!!! TCATTTTTTTAGTAATTTAG+TGG + chr8_1:1993702-1993721 None:intergenic 15.0%
!! TGAATGAAATTCAATAAATA+AGG - chr8_1:1994931-1994950 Msa1172120:three_prime_UTR 15.0%
!! GAATGAAATTCAATAAATAA+GGG - chr8_1:1994932-1994951 Msa1172120:three_prime_UTR 15.0%
!! TAGTGGAAAAAATAAATAAA+TGG - chr8_1:1994960-1994979 Msa1172120:three_prime_UTR 15.0%
!! AAATAAATATACAACTTACA+TGG + chr8_1:1996024-1996043 None:intergenic 15.0%
!!! GATAAAATTGATTCATTATT+TGG - chr8_1:1996466-1996485 Msa1172120:intron 15.0%
!! ACATTTATAAACATATTTCA+TGG - chr8_1:1999288-1999307 Msa1172120:five_prime_UTR 15.0%
!! AAAAAAAAATCATCATGACA+TGG + chr8_1:1988743-1988762 None:intergenic 20.0%
!!! AGAGCATTTCATTAATAATA+AGG - chr8_1:1988783-1988802 Msa1172120:intron 20.0%
!!! ATTAGATTTTTAATCTTTGG+CGG - chr8_1:1989844-1989863 Msa1172120:intron 20.0%
!! ATAGTAGAAATAATATTCGA+TGG - chr8_1:1990555-1990574 Msa1172120:intron 20.0%
!! AAAATACTCATGATATAAGA+CGG - chr8_1:1990585-1990604 Msa1172120:intron 20.0%
!! AACTCTATAACTAACATTAT+GGG + chr8_1:1990792-1990811 None:intergenic 20.0%
!! AATTCTAGTATTAGTATTCA+TGG - chr8_1:1991310-1991329 Msa1172120:three_prime_UTR 20.0%
!! GAACAAATGTAAAAATTTCA+AGG + chr8_1:1991394-1991413 None:intergenic 20.0%
!! AAAAAGGTTAACAATGTTAA+CGG + chr8_1:1991416-1991435 None:intergenic 20.0%
!! TAGATTACTAAGGAAAAATA+AGG + chr8_1:1991631-1991650 None:intergenic 20.0%
!!! TTACTCTAAAAAAATCTTGT+AGG - chr8_1:1991857-1991876 Msa1172120:intron 20.0%
!!! TTTTAAAGTTTTTTCCCATT+CGG + chr8_1:1992092-1992111 None:intergenic 20.0%
!! ATCTTATAATCCGAAAAAAT+GGG + chr8_1:1992120-1992139 None:intergenic 20.0%
!! TATAGTATAACTTGATACTA+TGG + chr8_1:1992209-1992228 None:intergenic 20.0%
!!! TCTTTTTACATCAAAGTATT+TGG - chr8_1:1992951-1992970 Msa1172120:intron 20.0%
!!! TATTTTCATGTAGAAACTAA+TGG + chr8_1:1992984-1993003 None:intergenic 20.0%
!!! ATTTTCTTATAGACCAAATT+AGG - chr8_1:1993391-1993410 Msa1172120:three_prime_UTR 20.0%
!! TTAAACTACTATACCTAATT+TGG + chr8_1:1993407-1993426 None:intergenic 20.0%
!!! ATTTTTTGTGGATGATATTT+TGG + chr8_1:1993480-1993499 None:intergenic 20.0%
!! TTAGCGAAGAAAAATATTTA+TGG - chr8_1:1993787-1993806 Msa1172120:three_prime_UTR 20.0%
!! AAATTCAAGCCTATTAATTT+GGG + chr8_1:1993991-1994010 None:intergenic 20.0%
!! AAGATTAATATCAACAAGAA+CGG - chr8_1:1994324-1994343 Msa1172120:three_prime_UTR 20.0%
!!! TATGTTTTTTTTCTTATGCA+TGG - chr8_1:1994610-1994629 Msa1172120:three_prime_UTR 20.0%
!! GTATAATTTATTGAAACTTG+TGG + chr8_1:1994743-1994762 None:intergenic 20.0%
!! TCACTAACTACAATTAATAA+GGG + chr8_1:1994900-1994919 None:intergenic 20.0%
!! TTCACTAACTACAATTAATA+AGG + chr8_1:1994901-1994920 None:intergenic 20.0%
!!! AATAAATAAGGGTATAATAG+TGG - chr8_1:1994943-1994962 Msa1172120:three_prime_UTR 20.0%
!! ATCAATATCATCATGAAATT+TGG + chr8_1:1996347-1996366 None:intergenic 20.0%
!! ATAAGAGAGGTTATAAAAAT+TGG - chr8_1:1996393-1996412 Msa1172120:intron 20.0%
!! ATAGCTAAAGATGAAATATT+TGG - chr8_1:1997377-1997396 Msa1172120:five_prime_UTR 20.0%
!!! TGTTTTCTTTGTTAAAATTC+AGG - chr8_1:1997454-1997473 Msa1172120:five_prime_UTR 20.0%
!! TTGTAATAATTACTCATTCA+AGG + chr8_1:1997611-1997630 None:intergenic 20.0%
!!! ATGAAATTGATTCATTTAGA+AGG + chr8_1:1999903-1999922 None:intergenic 20.0%
!! TATTCAATCATATTTCAGTA+TGG - chr8_1:1999962-1999981 Msa1172120:five_prime_UTR 20.0%
! TTAAAAAGGTAAAGTTAGTG+CGG + chr8_1:1987871-1987890 None:intergenic 25.0%
! AAGATAATGATGTAGTAGAA+AGG + chr8_1:1988210-1988229 None:intergenic 25.0%
! TTTCTACTACATCATTATCT+TGG - chr8_1:1988209-1988228 Msa1172120:three_prime_UTR 25.0%
! TTCTACTACATCATTATCTT+GGG - chr8_1:1988210-1988229 Msa1172120:three_prime_UTR 25.0%
! AACAACTATATCAATTACCT+TGG + chr8_1:1988310-1988329 None:intergenic 25.0%
!! ACTTTGATAATTGATATTGC+AGG - chr8_1:1988373-1988392 Msa1172120:intron 25.0%
! ATTGATCTATTATCCTAGTT+AGG - chr8_1:1988574-1988593 Msa1172120:intron 25.0%
! TTGATCTATTATCCTAGTTA+GGG - chr8_1:1988575-1988594 Msa1172120:intron 25.0%
!! TCCATACATGTTACTATTTT+AGG + chr8_1:1988608-1988627 None:intergenic 25.0%
!! AGAAAATGATGAATGCTTTT+TGG + chr8_1:1990533-1990552 None:intergenic 25.0%
! GAACTCTATAACTAACATTA+TGG + chr8_1:1990793-1990812 None:intergenic 25.0%
! TCAAATTATCAGATACTCTT+CGG - chr8_1:1990814-1990833 Msa1172120:intron 25.0%
! TTATTTGTTCATCATTTGTG+CGG + chr8_1:1991066-1991085 None:intergenic 25.0%
!!! TTGGTTAATAATGAGTTGAT+TGG + chr8_1:1991137-1991156 None:intergenic 25.0%
! TTTCAAGGTTAATATCATCA+TGG + chr8_1:1991379-1991398 None:intergenic 25.0%
! TACACTAATACTATTCTACT+AGG - chr8_1:1991543-1991562 Msa1172120:intron 25.0%
! CTTCAAAATGTAGATTACTA+AGG + chr8_1:1991641-1991660 None:intergenic 25.0%
!!! GCTATTGGCTATTATTTTAA+TGG - chr8_1:1991691-1991710 Msa1172120:three_prime_UTR 25.0%
!! GAGTTTAAGTGTCAATTTTT+AGG + chr8_1:1991819-1991838 None:intergenic 25.0%
! AAAAAAATCTTGTAGGAGAA+TGG - chr8_1:1991864-1991883 Msa1172120:intron 25.0%
! AAAAAATCTTGTAGGAGAAT+GGG - chr8_1:1991865-1991884 Msa1172120:intron 25.0%
! CCAAAATCCGAAATAATATA+GGG + chr8_1:1992066-1992085 None:intergenic 25.0%
! ACCAAAATCCGAAATAATAT+AGG + chr8_1:1992067-1992086 None:intergenic 25.0%
!!! TAAAAAAGACCCCATTTTTT+CGG - chr8_1:1992107-1992126 Msa1172120:intron 25.0%
! TCTTATAATCCGAAAAAATG+GGG + chr8_1:1992119-1992138 None:intergenic 25.0%
! GATCTTATAATCCGAAAAAA+TGG + chr8_1:1992121-1992140 None:intergenic 25.0%
! GATTATAAGATCCAAATGTA+GGG - chr8_1:1992129-1992148 Msa1172120:intron 25.0%
!! TTCTATTTCTTTCTACCTTA+TGG - chr8_1:1992448-1992467 Msa1172120:three_prime_UTR 25.0%
!! GATTAGAATCAAGATCTTTT+GGG + chr8_1:1992495-1992514 None:intergenic 25.0%
!! TGATTAGAATCAAGATCTTT+TGG + chr8_1:1992496-1992515 None:intergenic 25.0%
! CATATATGTCAAAGTAAACA+CGG + chr8_1:1992532-1992551 None:intergenic 25.0%
! ACATTTATACATGTATGGTA+TGG + chr8_1:1992681-1992700 None:intergenic 25.0%
! ATGGTACATTTATACATGTA+TGG + chr8_1:1992686-1992705 None:intergenic 25.0%
!!! ACAAGCTTGTTAATGTTATA+AGG + chr8_1:1992874-1992893 None:intergenic 25.0%
! ACATTAACAAGCTTGTATAA+TGG - chr8_1:1992878-1992897 Msa1172120:three_prime_UTR 25.0%
! AAAGATGTGAATCTAACTAA+TGG + chr8_1:1992936-1992955 None:intergenic 25.0%
! TTAAAAATTCAACTTTGCGT+TGG - chr8_1:1993056-1993075 Msa1172120:three_prime_UTR 25.0%
!!! TTCAATGGATTGTTCATTTT+AGG + chr8_1:1993083-1993102 None:intergenic 25.0%
!! AATTTTATCACAAGAGCAAA+GGG + chr8_1:1993185-1993204 None:intergenic 25.0%
!! AAATTTTATCACAAGAGCAA+AGG + chr8_1:1993186-1993205 None:intergenic 25.0%
! ATATTGCATATTTATATGCG+AGG - chr8_1:1993618-1993637 Msa1172120:intron 25.0%
! TATTGCATATTTATATGCGA+GGG - chr8_1:1993619-1993638 Msa1172120:intron 25.0%
! AAAGAGATGCAAAGAAAATA+AGG - chr8_1:1993757-1993776 Msa1172120:intron 25.0%
! ATTAAGAGGAAAAGTGATTT+AGG + chr8_1:1993896-1993915 None:intergenic 25.0%
! TTAAGATTGCCCAAATTAAT+AGG - chr8_1:1993979-1993998 Msa1172120:intron 25.0%
! CAAATTCAAGCCTATTAATT+TGG + chr8_1:1993992-1994011 None:intergenic 25.0%
!!! ACAAAGGAAAATTTGCTTTT+GGG + chr8_1:1994021-1994040 None:intergenic 25.0%
! ACTTACAAAAACCATTCAAA+GGG + chr8_1:1994279-1994298 None:intergenic 25.0%
! AACTTACAAAAACCATTCAA+AGG + chr8_1:1994280-1994299 None:intergenic 25.0%
! TTATCACCATAATCATTACA+AGG - chr8_1:1994413-1994432 Msa1172120:three_prime_UTR 25.0%
! TATACACAGCATCTTATAAA+TGG - chr8_1:1994758-1994777 Msa1172120:three_prime_UTR 25.0%
! TCTTATAAATGGAAAGTTTG+TGG - chr8_1:1994769-1994788 Msa1172120:three_prime_UTR 25.0%
! ATTTCCTTGAGTAACAAATA+AGG + chr8_1:1994822-1994841 None:intergenic 25.0%
!!! ACATAGTTTCTTTTGATTTC+AGG - chr8_1:1995114-1995133 Msa1172120:three_prime_UTR 25.0%
!!! CATAGTTTCTTTTGATTTCA+GGG - chr8_1:1995115-1995134 Msa1172120:three_prime_UTR 25.0%
!! AATTTAAGTTCATGCAAGAA+AGG + chr8_1:1995304-1995323 None:intergenic 25.0%
! TGGATTTATGATTATGATGA+TGG - chr8_1:1995328-1995347 Msa1172120:three_prime_UTR 25.0%
! AAAACAATAATGGTTAGACT+GGG + chr8_1:1995603-1995622 None:intergenic 25.0%
! AAAAACAATAATGGTTAGAC+TGG + chr8_1:1995604-1995623 None:intergenic 25.0%
!!! CTAACCATTATTGTTTTTAC+AGG - chr8_1:1995606-1995625 Msa1172120:three_prime_UTR 25.0%
!!! CATTATTGTTTTTACAGGTT+GGG - chr8_1:1995611-1995630 Msa1172120:three_prime_UTR 25.0%
! AAAATTGAGGTTAACTTATG+AGG + chr8_1:1995964-1995983 None:intergenic 25.0%
!! TCATAAGTTAACCTCAATTT+TGG - chr8_1:1995963-1995982 Msa1172120:three_prime_UTR 25.0%
! GAAGATTACAACTTAACATT+TGG + chr8_1:1996047-1996066 None:intergenic 25.0%
! TATTTAACAGTAACGCATAA+TGG + chr8_1:1996277-1996296 None:intergenic 25.0%
! CGTTACTGTTAAATATGTTT+AGG - chr8_1:1996282-1996301 Msa1172120:intron 25.0%
!!! ACTACGTTCTAAAACAAATA+CGG - chr8_1:1996716-1996735 Msa1172120:five_prime_UTR 25.0%
! CTTGAATATAAAAATACCTG+AGG + chr8_1:1996918-1996937 None:intergenic 25.0%
! AGAAAAAGAAAAATGAGACA+AGG + chr8_1:1996984-1997003 None:intergenic 25.0%
!! TTATTTGACTATCCTTTTCA+TGG - chr8_1:1997014-1997033 Msa1172120:five_prime_UTR 25.0%
!! TATTTGACTATCCTTTTCAT+GGG - chr8_1:1997015-1997034 Msa1172120:five_prime_UTR 25.0%
!!! AACAATTTGAGAAAGTACTT+AGG - chr8_1:1997139-1997158 Msa1172120:five_prime_UTR 25.0%
! TGAACATTTGAAAATACAGT+TGG + chr8_1:1997246-1997265 None:intergenic 25.0%
!! AACTGTATTTTCAAATGTTC+AGG - chr8_1:1997245-1997264 Msa1172120:five_prime_UTR 25.0%
! CTTATTTGTTTCAGATAAAC+AGG + chr8_1:1997776-1997795 None:intergenic 25.0%
!! CTGTTTATCTGAAACAAATA+AGG - chr8_1:1997774-1997793 Msa1172120:five_prime_UTR 25.0%
!! TATCTGAAACAAATAAGGAT+TGG - chr8_1:1997779-1997798 Msa1172120:five_prime_UTR 25.0%
!! ATCTGAAACAAATAAGGATT+GGG - chr8_1:1997780-1997799 Msa1172120:five_prime_UTR 25.0%
!! CATTATCTGAGTTCATTTTA+CGG - chr8_1:1998337-1998356 Msa1172120:five_prime_UTR 25.0%
! GATTCTTGAAATGAAAATCA+TGG + chr8_1:1998960-1998979 None:intergenic 25.0%
!! TAAATGTTTCTATATGTTGC+TGG + chr8_1:1999275-1999294 None:intergenic 25.0%
! AACATCTAATCAACAAGAAT+TGG - chr8_1:1999317-1999336 Msa1172120:five_prime_UTR 25.0%
!! TCATGGATTGATGATAATTA+GGG + chr8_1:1999367-1999386 None:intergenic 25.0%
!! TTCATGGATTGATGATAATT+AGG + chr8_1:1999368-1999387 None:intergenic 25.0%
! TTATCTCTTGTTAGAATTCA+TGG + chr8_1:1999384-1999403 None:intergenic 25.0%
! GAATTACAAGAAACATGTTA+TGG + chr8_1:1999443-1999462 None:intergenic 25.0%
! AAGTGAAAATGAATGGAAAA+TGG - chr8_1:1999695-1999714 Msa1172120:five_prime_UTR 25.0%
!! CTGTCTAAAATGTTTGTATA+CGG - chr8_1:2000049-2000068 Msa1172120:five_prime_UTR 25.0%
!!! ATTGTACTTGTTTAGTTTGT+TGG - chr8_1:2000467-2000486 Msa1172120:five_prime_UTR 25.0%
!! TACAAGTTCTTTTCGATAAT+TGG + chr8_1:2000502-2000521 None:intergenic 25.0%
TAGCTATTACTAAGTCATCA+AGG + chr8_1:1987837-1987856 None:intergenic 30.0%
TAAAAAGGTAAAGTTAGTGC+GGG + chr8_1:1987870-1987889 None:intergenic 30.0%
TACACCATTAACTCTTTCTT+TGG - chr8_1:1988096-1988115 Msa1172120:three_prime_UTR 30.0%
TAATGATGTAGTAGAAAGGA+TGG + chr8_1:1988206-1988225 None:intergenic 30.0%
GTGTTTATGAAGAAGAAAAG+AGG + chr8_1:1988268-1988287 None:intergenic 30.0%
AAACATTGCATCTTAGTAAG+TGG + chr8_1:1988401-1988420 None:intergenic 30.0%
TAAGATGCAATGTTTGTTCT+TGG - chr8_1:1988406-1988425 Msa1172120:intron 30.0%
GCCTAAAATAGTAACATGTA+TGG - chr8_1:1988604-1988623 Msa1172120:intron 30.0%
!! TATGTCCAATTTTGACAAGT+AGG - chr8_1:1988677-1988696 Msa1172120:intron 30.0%
!! ATGTCCAATTTTGACAAGTA+GGG - chr8_1:1988678-1988697 Msa1172120:intron 30.0%
ACTCAAAGGTTGAGTTTAAT+CGG + chr8_1:1988904-1988923 None:intergenic 30.0%
ATTAAACTCAACCTTTGAGT+TGG - chr8_1:1988904-1988923 Msa1172120:intron 30.0%
!!! TGATAATGTTGATTTTGCCT+TGG + chr8_1:1989032-1989051 None:intergenic 30.0%
ACCATTCCAAAGCATAATAA+AGG - chr8_1:1989068-1989087 Msa1172120:intron 30.0%
!! ACCTTTATTATGCTTTGGAA+TGG + chr8_1:1989072-1989091 None:intergenic 30.0%
TATGGACCTTTATTATGCTT+TGG + chr8_1:1989077-1989096 None:intergenic 30.0%
GATATGAATATCACAGGTTT+AGG + chr8_1:1989187-1989206 None:intergenic 30.0%
TCGAATGATATGAATATCAC+AGG + chr8_1:1989193-1989212 None:intergenic 30.0%
AACATAGGAACTTAAAGCTT+TGG + chr8_1:1989537-1989556 None:intergenic 30.0%
! AACAGATTTGATCTTCCTTT+TGG + chr8_1:1989620-1989639 None:intergenic 30.0%
! ATGAATTGTGTAGTTTGTGA+TGG + chr8_1:1989757-1989776 None:intergenic 30.0%
ATCACAAACTACACAATTCA+TGG - chr8_1:1989756-1989775 Msa1172120:intron 30.0%
TCACAAACTACACAATTCAT+GGG - chr8_1:1989757-1989776 Msa1172120:intron 30.0%
!!! AACTTTTAGTTTCCAAATCC+CGG - chr8_1:1989867-1989886 Msa1172120:intron 30.0%
AATCAAGGGAGTTTGTAAAA+TGG - chr8_1:1990020-1990039 Msa1172120:intron 30.0%
ATTATAGATGAACCTTGGTT+AGG + chr8_1:1990186-1990205 None:intergenic 30.0%
AACCAAGGTTCATCTATAAT+AGG - chr8_1:1990186-1990205 Msa1172120:intron 30.0%
ACCAAGGTTCATCTATAATA+GGG - chr8_1:1990187-1990206 Msa1172120:intron 30.0%
!! AAAGCTCGTTTTATTGTTAG+AGG + chr8_1:1990249-1990268 None:intergenic 30.0%
!! TGCTGTCAGAAAAGTATTAT+TGG - chr8_1:1990311-1990330 Msa1172120:intron 30.0%
!! GCTGTCAGAAAAGTATTATT+GGG - chr8_1:1990312-1990331 Msa1172120:intron 30.0%
!! CTGTCAGAAAAGTATTATTG+GGG - chr8_1:1990313-1990332 Msa1172120:intron 30.0%
!! AATGATGAATGCTTTTTGGT+GGG + chr8_1:1990529-1990548 None:intergenic 30.0%
!! AAATGATGAATGCTTTTTGG+TGG + chr8_1:1990530-1990549 None:intergenic 30.0%
TGTGGCAGAAAATTAATACT+TGG + chr8_1:1990674-1990693 None:intergenic 30.0%
GCACAAATGATGAACAAATA+AGG - chr8_1:1991065-1991084 Msa1172120:intron 30.0%
ACTAATACTAGAATTGCTGA+TGG + chr8_1:1991305-1991324 None:intergenic 30.0%
TAGTATTAGTATTCATGGAG+TGG - chr8_1:1991315-1991334 Msa1172120:three_prime_UTR 30.0%
! AACCAAAGCATTATCTAGAA+TGG - chr8_1:1991352-1991371 Msa1172120:three_prime_UTR 30.0%
!!! AGTGTTTTAACAAACTCTGT+CGG - chr8_1:1991461-1991480 Msa1172120:intron 30.0%
TCTCTTATTCTTGTCTCATA+AGG - chr8_1:1991582-1991601 Msa1172120:intron 30.0%
! CATAAGGTGGATATGTTTTT+CGG - chr8_1:1991598-1991617 Msa1172120:intron 30.0%
AATCCGAAATAATATAGGGT+GGG + chr8_1:1992062-1992081 None:intergenic 30.0%
AAATCCGAAATAATATAGGG+TGG + chr8_1:1992063-1992082 None:intergenic 30.0%
! CCCTATATTATTTCGGATTT+TGG - chr8_1:1992063-1992082 Msa1172120:intron 30.0%
GGATTATAAGATCCAAATGT+AGG - chr8_1:1992128-1992147 Msa1172120:intron 30.0%
GTTATACTATAGAGATACCA+AGG - chr8_1:1992218-1992237 Msa1172120:intron 30.0%
! ATATCAGTCAATGCTACTTA+TGG - chr8_1:1992312-1992331 Msa1172120:intron 30.0%
!!! TCTTGGCGTTATCATTTTTT+TGG - chr8_1:1992423-1992442 Msa1172120:three_prime_UTR 30.0%
TGTTTAACATCACATATGAC+TGG + chr8_1:1992626-1992645 None:intergenic 30.0%
AACCAGAATTTCATAGTCAA+CGG + chr8_1:1992833-1992852 None:intergenic 30.0%
GTTAATGTTATAAGGACTTG+AGG + chr8_1:1992866-1992885 None:intergenic 30.0%
!! CTTGTATAATGGATGAATTC+TGG - chr8_1:1992889-1992908 Msa1172120:three_prime_UTR 30.0%
ACAAATTTCAGTCATTGAGA+AGG + chr8_1:1993312-1993331 None:intergenic 30.0%
TAAGATGTTTACAACCTCAA+CGG + chr8_1:1993550-1993569 None:intergenic 30.0%
!! TGACAATTTGGTGATGTTAT+AGG - chr8_1:1993731-1993750 Msa1172120:intron 30.0%
ATATGATATGCAAGTGGAAA+TGG + chr8_1:1993823-1993842 None:intergenic 30.0%
ATTTCCACTTGCATATCATA+TGG - chr8_1:1993822-1993841 Msa1172120:three_prime_UTR 30.0%
! TGCATATCATATGGTTTGTA+TGG - chr8_1:1993831-1993850 Msa1172120:three_prime_UTR 30.0%
!! CACAAAGGAAAATTTGCTTT+TGG + chr8_1:1994022-1994041 None:intergenic 30.0%
AAGTTTGTCTTTCCATTAAG+CGG + chr8_1:1994141-1994160 None:intergenic 30.0%
! TCTTGTGAGGTTAATTTGAA+GGG + chr8_1:1994204-1994223 None:intergenic 30.0%
TATCATATGCACCATTTGTT+TGG + chr8_1:1994353-1994372 None:intergenic 30.0%
TCTTGTCCTTGTAATGATTA+TGG + chr8_1:1994422-1994441 None:intergenic 30.0%
ATAAGGAATTGAATACCTAG+TGG + chr8_1:1994566-1994585 None:intergenic 30.0%
TATGCATGGAATGAAATTTC+TGG - chr8_1:1994624-1994643 Msa1172120:three_prime_UTR 30.0%
!!! TTTATGTTTTGTTTCACCTC+AGG - chr8_1:1994647-1994666 Msa1172120:three_prime_UTR 30.0%
!!! ATTTTGAGACATTTCCAACA+TGG - chr8_1:1995063-1995082 Msa1172120:three_prime_UTR 30.0%
TGCATGAACTTAAATTAGCT+TGG - chr8_1:1995308-1995327 Msa1172120:three_prime_UTR 30.0%
! GGTTTATTGATAACTCTTTC+AGG - chr8_1:1995349-1995368 Msa1172120:three_prime_UTR 30.0%
!! GTTAAAAAAGCATTGACACA+AGG + chr8_1:1995550-1995569 None:intergenic 30.0%
AAACAATAATGGTTAGACTG+GGG + chr8_1:1995602-1995621 None:intergenic 30.0%
CCAACCTGTAAAAACAATAA+TGG + chr8_1:1995613-1995632 None:intergenic 30.0%
!!! CCATTATTGTTTTTACAGGT+TGG - chr8_1:1995610-1995629 Msa1172120:three_prime_UTR 30.0%
ATAAGTAGAGGAAAATTCCA+AGG + chr8_1:1995729-1995748 None:intergenic 30.0%
! TTTCTTTTGACATCAAAGCA+TGG + chr8_1:1995881-1995900 None:intergenic 30.0%
AAGGGTAATTGTTTCACAAT+TGG + chr8_1:1995926-1995945 None:intergenic 30.0%
CTTATGAGGTCAAAAACTAA+AGG + chr8_1:1995950-1995969 None:intergenic 30.0%
! AGTTGTAATCTTCACACTTT+TGG - chr8_1:1996054-1996073 Msa1172120:CDS 30.0%
! GTTGTAATCTTCACACTTTT+GGG - chr8_1:1996055-1996074 Msa1172120:CDS 30.0%
AAACTATATTCAGAACACCT+GGG + chr8_1:1996095-1996114 None:intergenic 30.0%
TAACATCAAGCTAAGTTCAT+CGG + chr8_1:1996236-1996255 None:intergenic 30.0%
TATACCTTACTGTATAAGAG+AGG - chr8_1:1996380-1996399 Msa1172120:intron 30.0%
ATAACCTCTCTTATACAGTA+AGG + chr8_1:1996387-1996406 None:intergenic 30.0%
! CTTTGCTCTTTTCTTTAATC+AGG - chr8_1:1996675-1996694 Msa1172120:five_prime_UTR 30.0%
!!! GTATTTGTTTTAGAACGTAG+TGG + chr8_1:1996717-1996736 None:intergenic 30.0%
CTAAAACAAATACGGAAATG+TGG - chr8_1:1996724-1996743 Msa1172120:five_prime_UTR 30.0%
CTATTGTAACATTACCCTAT+AGG - chr8_1:1996950-1996969 Msa1172120:five_prime_UTR 30.0%
! AACAACATAACACTGTTTTG+TGG - chr8_1:1997087-1997106 Msa1172120:five_prime_UTR 30.0%
GTACTTAGGTATATAAAGTC+TGG - chr8_1:1997153-1997172 Msa1172120:five_prime_UTR 30.0%
CATTAGCATGTGTTAGAAAA+TGG + chr8_1:1997333-1997352 None:intergenic 30.0%
! CATTTTCTAACACATGCTAA+TGG - chr8_1:1997331-1997350 Msa1172120:five_prime_UTR 30.0%
AACAAAGAAAACAAGCAAGT+AGG + chr8_1:1997447-1997466 None:intergenic 30.0%
! AGGATGCAGTTTCTATATTT+TGG + chr8_1:1997674-1997693 None:intergenic 30.0%
TTTGTTTCAGATAAACAGGT+TGG + chr8_1:1997772-1997791 None:intergenic 30.0%
! TCTGAAACAAATAAGGATTG+GGG - chr8_1:1997781-1997800 Msa1172120:five_prime_UTR 30.0%
AGGTAAGAAGAATCTTATGA+CGG + chr8_1:1997958-1997977 None:intergenic 30.0%
! GATTCTTCTTACCTTGTTAT+AGG - chr8_1:1997964-1997983 Msa1172120:five_prime_UTR 30.0%
GTCATGATTATGTTAGACTT+AGG + chr8_1:1998068-1998087 None:intergenic 30.0%
AAAGCTTAAACAAGATGTAG+TGG + chr8_1:1998532-1998551 None:intergenic 30.0%
! CACAGCTTTAATAAAGTTCT+TGG - chr8_1:1998578-1998597 Msa1172120:five_prime_UTR 30.0%
GGTAGAAATGAACTAAGAAA+GGG + chr8_1:1998884-1998903 None:intergenic 30.0%
CATGGTAATCTTAACAAGTA+TGG + chr8_1:1998942-1998961 None:intergenic 30.0%
!!! CATTGCTTAGATGTTGTTTT+GGG - chr8_1:1998995-1999014 Msa1172120:five_prime_UTR 30.0%
!!! ATTGCTTAGATGTTGTTTTG+GGG - chr8_1:1998996-1999015 Msa1172120:five_prime_UTR 30.0%
ATACGATGAAAGAAAAGCTT+CGG - chr8_1:1999032-1999051 Msa1172120:five_prime_UTR 30.0%
! GATCAATTTGGATGAGTTTT+GGG + chr8_1:1999232-1999251 None:intergenic 30.0%
AATCAACAAGAATTGGTCAA+AGG - chr8_1:1999324-1999343 Msa1172120:five_prime_UTR 30.0%
ATCAACAAGAATTGGTCAAA+GGG - chr8_1:1999325-1999344 Msa1172120:five_prime_UTR 30.0%
! CATGGATTGATGATAATTAG+GGG + chr8_1:1999366-1999385 None:intergenic 30.0%
CAAGAAATAATCCAAAGCTA+GGG + chr8_1:1999486-1999505 None:intergenic 30.0%
TCAAGAAATAATCCAAAGCT+AGG + chr8_1:1999487-1999506 None:intergenic 30.0%
!! ATGGATTGGATGAAAAGATA+AGG + chr8_1:1999511-1999530 None:intergenic 30.0%
GAAAGAGAAGTGAAAATGAA+TGG - chr8_1:1999688-1999707 Msa1172120:five_prime_UTR 30.0%
AATATTCCGATACTAACAAG+CGG - chr8_1:1999864-1999883 Msa1172120:five_prime_UTR 30.0%
! CGTATACAAACATTTTAGAC+AGG + chr8_1:2000051-2000070 None:intergenic 30.0%
CTAAAATGTTTGTATACGGT+TGG - chr8_1:2000053-2000072 Msa1172120:five_prime_UTR 30.0%
AGAAATAACTAACTGTGCTG+TGG + chr8_1:1987899-1987918 None:intergenic 35.0%
AGGTCCAAAGAAAGAGTTAA+TGG + chr8_1:1988103-1988122 None:intergenic 35.0%
TCTTTCTTTGGACCTGATAT+TGG - chr8_1:1988108-1988127 Msa1172120:three_prime_UTR 35.0%
TCAGAGAAAGAACCAATATC+AGG + chr8_1:1988123-1988142 None:intergenic 35.0%
!! ATATTGGTTCTTTCTCTGAG+TGG - chr8_1:1988124-1988143 Msa1172120:three_prime_UTR 35.0%
TAGAGTATGACCACCAAAAA+GGG + chr8_1:1988157-1988176 None:intergenic 35.0%
CTAGAGTAAAGAAGACATAG+AGG + chr8_1:1988240-1988259 None:intergenic 35.0%
CTCTATGTCTTCTTTACTCT+AGG - chr8_1:1988238-1988257 Msa1172120:three_prime_UTR 35.0%
CTTGATCGTAATCTACTTTG+AGG - chr8_1:1988475-1988494 Msa1172120:intron 35.0%
!! TGTCCAATTTTGACAAGTAG+GGG - chr8_1:1988679-1988698 Msa1172120:intron 35.0%
! ATAAGGTGTTCAATACAACG+AGG - chr8_1:1988800-1988819 Msa1172120:intron 35.0%
ACGAGGTACATAAGAATAAG+TGG - chr8_1:1988817-1988836 Msa1172120:intron 35.0%
AGGTACATAAGAATAAGTGG+TGG - chr8_1:1988820-1988839 Msa1172120:intron 35.0%
GGTACATAAGAATAAGTGGT+GGG - chr8_1:1988821-1988840 Msa1172120:intron 35.0%
TGGAATGGTTAAGTGATATG+AGG + chr8_1:1989057-1989076 None:intergenic 35.0%
TTTCCACATGCTCCATAAAA+GGG - chr8_1:1989555-1989574 Msa1172120:intron 35.0%
! AACATTTTGCTGCCCTTTTA+TGG + chr8_1:1989570-1989589 None:intergenic 35.0%
ATAAAAGGGCAGCAAAATGT+TGG - chr8_1:1989569-1989588 Msa1172120:intron 35.0%
TGCACAATTAGAGTTAGTAC+AGG - chr8_1:1989639-1989658 Msa1172120:intron 35.0%
!!! CTTTTTCGATTGTTCCTTTG+CGG + chr8_1:1989710-1989729 None:intergenic 35.0%
CACAAACTACACAATTCATG+GGG - chr8_1:1989758-1989777 Msa1172120:intron 35.0%
CTTTATCCTGTAAACGAACA+CGG - chr8_1:1989791-1989810 Msa1172120:intron 35.0%
TTTATCCTGTAAACGAACAC+GGG - chr8_1:1989792-1989811 Msa1172120:intron 35.0%
!! TTCATACTCATTCTAAGACG+TGG + chr8_1:1990092-1990111 None:intergenic 35.0%
TCCCTATTATAGATGAACCT+TGG + chr8_1:1990191-1990210 None:intergenic 35.0%
AGGTTCATCTATAATAGGGA+TGG - chr8_1:1990191-1990210 Msa1172120:intron 35.0%
TTATTGTTAGAGGAGGATCT+CGG + chr8_1:1990239-1990258 None:intergenic 35.0%
! ACTTTTCTGACAGCATCTTT+GGG + chr8_1:1990306-1990325 None:intergenic 35.0%
! TACTTTTCTGACAGCATCTT+TGG + chr8_1:1990307-1990326 None:intergenic 35.0%
!! GTTGGCTTCTCGTATTTTTA+AGG + chr8_1:1990349-1990368 None:intergenic 35.0%
!! ATGATGAATGCTTTTTGGTG+GGG + chr8_1:1990528-1990547 None:intergenic 35.0%
ACTCATGATATAAGACGGAA+TGG - chr8_1:1990590-1990609 Msa1172120:intron 35.0%
TCTTCGGCTATAGAAAATCT+CGG - chr8_1:1990830-1990849 Msa1172120:intron 35.0%
CTATAGAAAATCTCGGACTT+CGG - chr8_1:1990837-1990856 Msa1172120:intron 35.0%
ACTTCGGTAAACTTATCGAT+TGG - chr8_1:1990853-1990872 Msa1172120:intron 35.0%
TGATGAACAAATAAGGAGAC+AGG - chr8_1:1991072-1991091 Msa1172120:intron 35.0%
GATGAACAAATAAGGAGACA+GGG - chr8_1:1991073-1991092 Msa1172120:intron 35.0%
ATGAACAAATAAGGAGACAG+GGG - chr8_1:1991074-1991093 Msa1172120:intron 35.0%
! TTAACTCTCAATGGATTCAG+TGG + chr8_1:1991196-1991215 None:intergenic 35.0%
GTCCATTCTAGATAATGCTT+TGG + chr8_1:1991357-1991376 None:intergenic 35.0%
ATTCTACTAGGTTTCAACTC+TGG - chr8_1:1991555-1991574 Msa1172120:intron 35.0%
CTTATTCTTGTCTCATAAGG+TGG - chr8_1:1991585-1991604 Msa1172120:intron 35.0%
ACACGGCAAGAACATTTATT+TGG + chr8_1:1991783-1991802 None:intergenic 35.0%
TAGGAAGAGTTGTAACAACA+CGG + chr8_1:1991800-1991819 None:intergenic 35.0%
TGCTTGTGTGTTTGCTTAAT+TGG - chr8_1:1991975-1991994 Msa1172120:three_prime_UTR 35.0%
TTGTGTGTTTGCTTAATTGG+TGG - chr8_1:1991978-1991997 Msa1172120:three_prime_UTR 35.0%
TCTCCCACCCTATATTATTT+CGG - chr8_1:1992056-1992075 Msa1172120:intron 35.0%
! GCACAACGAGAATTTCTTTT+CGG + chr8_1:1992174-1992193 None:intergenic 35.0%
CAAGCAGTATAAAGAAGCTA+TGG + chr8_1:1992341-1992360 None:intergenic 35.0%
TAGCTTCTTTATACTGCTTG+TGG - chr8_1:1992341-1992360 Msa1172120:intron 35.0%
GACGTTATACACAAACCATA+AGG + chr8_1:1992466-1992485 None:intergenic 35.0%
AGCTAACCTAGTAATCAGAT+TGG + chr8_1:1992571-1992590 None:intergenic 35.0%
ATATGACTGGTGAGTTATAC+AGG + chr8_1:1992613-1992632 None:intergenic 35.0%
TTGCTTCAATTTACAGAGCA+TGG + chr8_1:1992705-1992724 None:intergenic 35.0%
ACCAGAATTTCATAGTCAAC+GGG + chr8_1:1992832-1992851 None:intergenic 35.0%
GATGTGAATCTAACTAATGG+TGG + chr8_1:1992933-1992952 None:intergenic 35.0%
CAAGAGCAAAGGGATATAAA+TGG + chr8_1:1993175-1993194 None:intergenic 35.0%
ATATACGAGGACAACTTAGA+CGG + chr8_1:1993289-1993308 None:intergenic 35.0%
AAGATGTTTACAACCTCAAC+GGG + chr8_1:1993549-1993568 None:intergenic 35.0%
TGATGTGACATGTGACAATT+TGG - chr8_1:1993719-1993738 Msa1172120:intron 35.0%
!! CAATTTGGTGATGTTATAGG+AGG - chr8_1:1993734-1993753 Msa1172120:intron 35.0%
CAAACCATATGATATGCAAG+TGG + chr8_1:1993829-1993848 None:intergenic 35.0%
AGTGATTTAGGTAGCTCATA+TGG + chr8_1:1993884-1993903 None:intergenic 35.0%
TTGAGACTAGAGAGAGAATT+GGG + chr8_1:1994104-1994123 None:intergenic 35.0%
ATTGAGACTAGAGAGAGAAT+TGG + chr8_1:1994105-1994124 None:intergenic 35.0%
! CTCTTGTGAGGTTAATTTGA+AGG + chr8_1:1994205-1994224 None:intergenic 35.0%
TCAAATTAACCTCACAAGAG+TGG - chr8_1:1994205-1994224 Msa1172120:three_prime_UTR 35.0%
CAAATTAACCTCACAAGAGT+GGG - chr8_1:1994206-1994225 Msa1172120:three_prime_UTR 35.0%
AAATTAACCTCACAAGAGTG+GGG - chr8_1:1994207-1994226 Msa1172120:three_prime_UTR 35.0%
ACATACATTAGCCCTTTGAA+TGG - chr8_1:1994265-1994284 Msa1172120:three_prime_UTR 35.0%
AAGAACGGTTACCAAACAAA+TGG - chr8_1:1994339-1994358 Msa1172120:three_prime_UTR 35.0%
TCCAGAAGAAGAAGAAGATA+GGG + chr8_1:1994519-1994538 None:intergenic 35.0%
ACAGTTACAGTTACAGGATA+AGG + chr8_1:1994583-1994602 None:intergenic 35.0%
CTGCATCAGGTAATGTTTAA+AGG - chr8_1:1994795-1994814 Msa1172120:three_prime_UTR 35.0%
! AGGTCCTTATTTGTTACTCA+AGG - chr8_1:1994815-1994834 Msa1172120:three_prime_UTR 35.0%
TTGATGCAGTGAAAAAATGC+TGG - chr8_1:1995030-1995049 Msa1172120:three_prime_UTR 35.0%
! CTTACATAGGCACTCATTTT+AGG + chr8_1:1995264-1995283 None:intergenic 35.0%
! CAATGGAAAGCTTTATGAAC+AGG - chr8_1:1995451-1995470 Msa1172120:three_prime_UTR 35.0%
CGAAATAAACGCACAAACAT+AGG + chr8_1:1995494-1995513 None:intergenic 35.0%
GTTGGGCAGATAAAATTCAT+GGG - chr8_1:1995628-1995647 Msa1172120:three_prime_UTR 35.0%
TAGCAGGACAAATTATACCT+TGG - chr8_1:1995709-1995728 Msa1172120:three_prime_UTR 35.0%
TTCCTCTACTTATGTTTGCT+TGG - chr8_1:1995736-1995755 Msa1172120:three_prime_UTR 35.0%
TTCCAAGCAAACATAAGTAG+AGG + chr8_1:1995741-1995760 None:intergenic 35.0%
CTTATGTTTGCTTGGAAAGT+TGG - chr8_1:1995744-1995763 Msa1172120:three_prime_UTR 35.0%
AGGTCAAAAACTAAAGGCAA+GGG + chr8_1:1995944-1995963 None:intergenic 35.0%
AACTATATTCAGAACACCTG+GGG + chr8_1:1996094-1996113 None:intergenic 35.0%
GAAACTATATTCAGAACACC+TGG + chr8_1:1996096-1996115 None:intergenic 35.0%
! GGTGTTCTGAATATAGTTTC+TGG - chr8_1:1996096-1996115 Msa1172120:CDS 35.0%
!! CTGAATATAGTTTCTGGCTA+TGG - chr8_1:1996102-1996121 Msa1172120:CDS 35.0%
!! AACAGTAACGCATAATGGAT+TGG + chr8_1:1996272-1996291 None:intergenic 35.0%
ATCTTGAAGTTAGCATTCAC+TGG - chr8_1:1996444-1996463 Msa1172120:intron 35.0%
! TATTAGCTTATGCCTTATGC+TGG - chr8_1:1996749-1996768 Msa1172120:five_prime_UTR 35.0%
TGAGTTCTTGGAGAAATCAA+AGG - chr8_1:1996836-1996855 Msa1172120:five_prime_UTR 35.0%
!! TGTTGGTGATCCATTTAAGA+AGG - chr8_1:1996878-1996897 Msa1172120:five_prime_UTR 35.0%
!! GTTGGTGATCCATTTAAGAA+GGG - chr8_1:1996879-1996898 Msa1172120:five_prime_UTR 35.0%
ACAAGGAACATAGACCTATA+GGG + chr8_1:1996967-1996986 None:intergenic 35.0%
!!! CATTAGCTTTTCCCATGAAA+AGG + chr8_1:1997029-1997048 None:intergenic 35.0%
CATTTGAAAATACAGTTGGC+TGG + chr8_1:1997242-1997261 None:intergenic 35.0%
TTTCTGTAAACAGTCACTTG+TGG + chr8_1:1997284-1997303 None:intergenic 35.0%
CATGCTAATGGCTATTACAT+AGG - chr8_1:1997343-1997362 Msa1172120:five_prime_UTR 35.0%
ACTTCAAGATTGTCTGAACT+GGG + chr8_1:1997403-1997422 None:intergenic 35.0%
AACTTCAAGATTGTCTGAAC+TGG + chr8_1:1997404-1997423 None:intergenic 35.0%
!! GCTTTGAAGTTGGAACATAA+TGG + chr8_1:1997487-1997506 None:intergenic 35.0%
!! ATGCAGAATAGCTTTGAAGT+TGG + chr8_1:1997497-1997516 None:intergenic 35.0%
AACTTCAAAGCTATTCTGCA+TGG - chr8_1:1997496-1997515 Msa1172120:five_prime_UTR 35.0%
ACTTCAAAGCTATTCTGCAT+GGG - chr8_1:1997497-1997516 Msa1172120:five_prime_UTR 35.0%
TTCCTAGGTACGTTTAGTAT+GGG + chr8_1:1997533-1997552 None:intergenic 35.0%
!! CATGTGCATTAAGTTGATAC+TGG - chr8_1:1997559-1997578 Msa1172120:five_prime_UTR 35.0%
AAGAAGTGAAGCCTATAACA+AGG + chr8_1:1997978-1997997 None:intergenic 35.0%
TTCACTTCTTATACGTGTCA+TGG - chr8_1:1997988-1998007 Msa1172120:five_prime_UTR 35.0%
ATCATGACACGATTCTAAAC+CGG - chr8_1:1998080-1998099 Msa1172120:five_prime_UTR 35.0%
ATTCCTTAGATAGGTTCCAT+CGG + chr8_1:1998405-1998424 None:intergenic 35.0%
CCTATCTAAGGAATAACCAA+CGG - chr8_1:1998411-1998430 Msa1172120:five_prime_UTR 35.0%
! ACATGCTATCTCTTTTACCT+CGG - chr8_1:1998629-1998648 Msa1172120:five_prime_UTR 35.0%
GCATATAGTTTACCTCTAGT+TGG + chr8_1:1998668-1998687 None:intergenic 35.0%
GGGTAGAAATGAACTAAGAA+AGG + chr8_1:1998885-1998904 None:intergenic 35.0%
TTCATTTCTACCCGAGTATT+CGG - chr8_1:1998892-1998911 Msa1172120:five_prime_UTR 35.0%
CTTAACAAGTATGGCAAGAA+TGG + chr8_1:1998933-1998952 None:intergenic 35.0%
!! GCATTGCTTAGATGTTGTTT+TGG - chr8_1:1998994-1999013 Msa1172120:five_prime_UTR 35.0%
! TAACCTTGTCAATGTGCTTT+TGG + chr8_1:1999091-1999110 None:intergenic 35.0%
TGGGTCAAAAATTGCAGATT+TGG + chr8_1:1999213-1999232 None:intergenic 35.0%
! GGATCAATTTGGATGAGTTT+TGG + chr8_1:1999233-1999252 None:intergenic 35.0%
TATATGTTGCTGGATGCTTA+TGG + chr8_1:1999265-1999284 None:intergenic 35.0%
TCAACAAGAATTGGTCAAAG+GGG - chr8_1:1999326-1999345 Msa1172120:five_prime_UTR 35.0%
!!! ATAGTTAGTTTTCCACCCTT+GGG + chr8_1:1999412-1999431 None:intergenic 35.0%
!!! TATAGTTAGTTTTCCACCCT+TGG + chr8_1:1999413-1999432 None:intergenic 35.0%
GAAAGGATTAAAGCATGGAT+TGG + chr8_1:1999525-1999544 None:intergenic 35.0%
TGAAGGAAAGGATTAAAGCA+TGG + chr8_1:1999530-1999549 None:intergenic 35.0%
! TCATGATCATGCATGGATTA+TGG + chr8_1:1999576-1999595 None:intergenic 35.0%
ATCCATGCATGATCATGATT+AGG - chr8_1:1999578-1999597 Msa1172120:five_prime_UTR 35.0%
ATCATGATTAGGAGGAAGTT+TGG - chr8_1:1999589-1999608 Msa1172120:five_prime_UTR 35.0%
TCATGATTAGGAGGAAGTTT+GGG - chr8_1:1999590-1999609 Msa1172120:five_prime_UTR 35.0%
AGGAAGTTTGGGTGATAAAA+AGG - chr8_1:1999601-1999620 Msa1172120:five_prime_UTR 35.0%
TTTGGGTGATAAAAAGGAGA+GGG - chr8_1:1999607-1999626 Msa1172120:five_prime_UTR 35.0%
TACGTTGCAAGAGCTATATA+AGG + chr8_1:1999730-1999749 None:intergenic 35.0%
TTTAAGTATCAGTGTCAGGT+CGG + chr8_1:1999760-1999779 None:intergenic 35.0%
GTTTATCAATGACATCAGTC+AGG + chr8_1:1999789-1999808 None:intergenic 35.0%
ATATTCCGATACTAACAAGC+GGG - chr8_1:1999865-1999884 Msa1172120:five_prime_UTR 35.0%
! AATATCCCGCTTGTTAGTAT+CGG + chr8_1:1999873-1999892 None:intergenic 35.0%
GTATGGCATCATGCATAATA+TGG - chr8_1:1999979-1999998 Msa1172120:five_prime_UTR 35.0%
TAGAATTCAAGACAGTACCT+TGG - chr8_1:2000104-2000123 Msa1172120:intron 35.0%
ACCTTGGAATATTTGTAGTG+TGG - chr8_1:2000120-2000139 Msa1172120:five_prime_UTR 35.0%
ACATTGATGAAGTGATACGA+CGG - chr8_1:2000193-2000212 Msa1172120:intron 35.0%
! TTTGATGCTGCAATTCCTTT+TGG - chr8_1:2000333-2000352 Msa1172120:five_prime_UTR 35.0%
TCTCTACCTTTACCCTTCAA+GGG - chr8_1:1987921-1987940 Msa1172120:three_prime_UTR 40.0%
CAGTTTCAACTACCCTTGAA+GGG + chr8_1:1987936-1987955 None:intergenic 40.0%
TCAGTTTCAACTACCCTTGA+AGG + chr8_1:1987937-1987956 None:intergenic 40.0%
AGTGATTATTATGCCATGCC+AGG - chr8_1:1987982-1988001 Msa1172120:three_prime_UTR 40.0%
TGTTTAACCACCGTCAGTAA+CGG - chr8_1:1988045-1988064 Msa1172120:three_prime_UTR 40.0%
TAATGGTGTAGATGAGTGTG+TGG + chr8_1:1988086-1988105 None:intergenic 40.0%
CTAGAGTATGACCACCAAAA+AGG + chr8_1:1988158-1988177 None:intergenic 40.0%
!! ATGGTGGATGTAATCAGCAA+CGG + chr8_1:1988187-1988206 None:intergenic 40.0%
TGATGTAGTAGAAAGGATGG+TGG + chr8_1:1988203-1988222 None:intergenic 40.0%
TCTAGATTCTTCTCTCTCCA+AGG - chr8_1:1988290-1988309 Msa1172120:three_prime_UTR 40.0%
TGTTTGTTCTTGGTATCTGC+TGG - chr8_1:1988416-1988435 Msa1172120:intron 40.0%
TTAGGCAGATTTCCCTAACT+AGG + chr8_1:1988590-1988609 None:intergenic 40.0%
CATCCCCTACTTGTCAAAAT+TGG + chr8_1:1988685-1988704 None:intergenic 40.0%
CTTGCATTTCACCAACTCAA+AGG + chr8_1:1988918-1988937 None:intergenic 40.0%
ATCCCAAATTCAGAGACATC+CGG - chr8_1:1988968-1988987 Msa1172120:intron 40.0%
!! CTTGGACTCTAAAACTACAG+TGG + chr8_1:1989014-1989033 None:intergenic 40.0%
!!! CACTGTAGTTTTAGAGTCCA+AGG - chr8_1:1989012-1989031 Msa1172120:intron 40.0%
TTGTGCATTCTGTTCACGTA+GGG + chr8_1:1989105-1989124 None:intergenic 40.0%
TGCAAAGGCTATTCCTTTAC+CGG + chr8_1:1989128-1989147 None:intergenic 40.0%
ATGTGTATACGCGATGAAGA+GGG + chr8_1:1989163-1989182 None:intergenic 40.0%
ATGGTTCATCCTCTTTGTCA+TGG + chr8_1:1989264-1989283 None:intergenic 40.0%
TGCTATTGCAGCAGGTATAT+TGG - chr8_1:1989441-1989460 Msa1172120:intron 40.0%
TATGGAGCATGTGGAAACAT+AGG + chr8_1:1989552-1989571 None:intergenic 40.0%
GTTTCCACATGCTCCATAAA+AGG - chr8_1:1989554-1989573 Msa1172120:intron 40.0%
!! TTTGATCTTCCTTTTGGTGC+AGG + chr8_1:1989614-1989633 None:intergenic 40.0%
ACATGATGTAGATCTTCCGA+AGG - chr8_1:1989730-1989749 Msa1172120:intron 40.0%
!! TGTAGTTTGTGATGGACCTT+CGG + chr8_1:1989749-1989768 None:intergenic 40.0%
CGTGTTCGTTTACAGGATAA+AGG + chr8_1:1989793-1989812 None:intergenic 40.0%
CTAATTTGGCGTATGTGTAG+AGG + chr8_1:1989829-1989848 None:intergenic 40.0%
TGATTGACACTGTTCATCTG+CGG + chr8_1:1989909-1989928 None:intergenic 40.0%
!! TGAAGATGCCTTGATTTGGA+AGG + chr8_1:1989989-1990008 None:intergenic 40.0%
TGACTGAAGATGCCTTGATT+TGG + chr8_1:1989993-1990012 None:intergenic 40.0%
TTCAGTCACTTGCTCAATCA+AGG - chr8_1:1990005-1990024 Msa1172120:intron 40.0%
TCAGTCACTTGCTCAATCAA+GGG - chr8_1:1990006-1990025 Msa1172120:intron 40.0%
!! TCTATTGCGGAATTTTGGAG+TGG + chr8_1:1990124-1990143 None:intergenic 40.0%
!! GCTCGTTTTATTGTTAGAGG+AGG + chr8_1:1990246-1990265 None:intergenic 40.0%
!!! CTTCTCGTATTTTTAAGGCG+CGG + chr8_1:1990344-1990363 None:intergenic 40.0%
TATGACTGAACCTCATACGT+TGG + chr8_1:1990367-1990386 None:intergenic 40.0%
CAATGCTTGGTAAACAAGCA+TGG + chr8_1:1990395-1990414 None:intergenic 40.0%
! TTTGAAACCCATACCTCCAT+TGG - chr8_1:1990437-1990456 Msa1172120:intron 40.0%
!! AGGTATTCACTGGCTTTCTT+GGG + chr8_1:1990484-1990503 None:intergenic 40.0%
! CTAACAATCGAGGTATTCAC+TGG + chr8_1:1990494-1990513 None:intergenic 40.0%
CTTATGTTAAAGATCGCGTG+TGG + chr8_1:1990692-1990711 None:intergenic 40.0%
CGATTTCTACCAATCATCGA+TGG - chr8_1:1990726-1990745 Msa1172120:intron 40.0%
!!! TTTTAAAGCCACTGAGAACC+AGG + chr8_1:1990925-1990944 None:intergenic 40.0%
AGTCATCTGCAAAAAGCAGA+TGG - chr8_1:1990955-1990974 Msa1172120:intron 40.0%
GTCATCTGCAAAAAGCAGAT+GGG - chr8_1:1990956-1990975 Msa1172120:intron 40.0%
TTGTTCATCATTTGTGCGGA+GGG + chr8_1:1991062-1991081 None:intergenic 40.0%
TTTGTTCATCATTTGTGCGG+AGG + chr8_1:1991063-1991082 None:intergenic 40.0%
TGAACAAATAAGGAGACAGG+GGG - chr8_1:1991075-1991094 Msa1172120:intron 40.0%
!!! GGATGGGTTTTAACTCTCAA+TGG + chr8_1:1991205-1991224 None:intergenic 40.0%
AGTAAAGCGTATGATCGCAT+TGG + chr8_1:1991257-1991276 None:intergenic 40.0%
! TAGAATTGCTGATGGTAGTG+TGG + chr8_1:1991297-1991316 None:intergenic 40.0%
TTTAACAAACTCTGTCGGAG+AGG - chr8_1:1991466-1991485 Msa1172120:intron 40.0%
CACTCTACTTGTGAAGTCTA+GGG + chr8_1:1991672-1991691 None:intergenic 40.0%
! CTTCACAAGTAGAGTGCTAT+TGG - chr8_1:1991676-1991695 Msa1172120:three_prime_UTR 40.0%
GGAAAACAACCATGTACACT+TGG - chr8_1:1991886-1991905 Msa1172120:three_prime_UTR 40.0%
GCTCAAAATCCAAGTGTACA+TGG + chr8_1:1991898-1991917 None:intergenic 40.0%
! TACACTTGGATTTTGAGCAC+TGG - chr8_1:1991900-1991919 Msa1172120:three_prime_UTR 40.0%
CAACTACAACAACAGCATCT+GGG + chr8_1:1991953-1991972 None:intergenic 40.0%
! GTGGATTCTTTTACCTCAAC+AGG - chr8_1:1991997-1992016 Msa1172120:three_prime_UTR 40.0%
GTCTAACAAAACACCTGTTG+AGG + chr8_1:1992013-1992032 None:intergenic 40.0%
!!! TTCGGATTTTGGTTTCCGAA+TGG - chr8_1:1992074-1992093 Msa1172120:intron 40.0%
!!! TCGGATTTTGGTTTCCGAAT+GGG - chr8_1:1992075-1992094 Msa1172120:intron 40.0%
AGAGGAACAAGTCAAAACCT+TGG + chr8_1:1992238-1992257 None:intergenic 40.0%
CAAGGCAATGAAGAAGAAAG+AGG + chr8_1:1992256-1992275 None:intergenic 40.0%
TTTCTTCTTCATTGCCTTGC+AGG - chr8_1:1992257-1992276 Msa1172120:intron 40.0%
TTCTTCTTCATTGCCTTGCA+GGG - chr8_1:1992258-1992277 Msa1172120:intron 40.0%
!! ATCAAGATCTTTTGGGTGCA+TGG + chr8_1:1992488-1992507 None:intergenic 40.0%
CAAAGTAAACACGGTTAACG+TGG + chr8_1:1992523-1992542 None:intergenic 40.0%
ACCTAGTAATCAGATTGGAC+TGG + chr8_1:1992566-1992585 None:intergenic 40.0%
GTCATTGAGAAGGATATACG+AGG + chr8_1:1993302-1993321 None:intergenic 40.0%
ATATTTGGCAGTACAGCGAA+AGG - chr8_1:1993506-1993525 Msa1172120:intron 40.0%
! TATTTTGTGTACACCCGTTG+AGG - chr8_1:1993533-1993552 Msa1172120:intron 40.0%
GCATATTTATATGCGAGGGT+CGG - chr8_1:1993623-1993642 Msa1172120:intron 40.0%
! TAGCTCATATGGTTTGCAAG+GGG + chr8_1:1993873-1993892 None:intergenic 40.0%
! GTAGCTCATATGGTTTGCAA+GGG + chr8_1:1993874-1993893 None:intergenic 40.0%
ATGCTACCATTTCCGCTTAA+TGG - chr8_1:1994126-1994145 Msa1172120:three_prime_UTR 40.0%
GTCTTTCCATTAAGCGGAAA+TGG + chr8_1:1994135-1994154 None:intergenic 40.0%
TCCCTATCTTCTTCTTCTTC+TGG - chr8_1:1994515-1994534 Msa1172120:three_prime_UTR 40.0%
CTCCAGAAGAAGAAGAAGAT+AGG + chr8_1:1994520-1994539 None:intergenic 40.0%
ACCTCAGGAAGAAAATCTGA+AGG - chr8_1:1994662-1994681 Msa1172120:three_prime_UTR 40.0%
CCTCAGGAAGAAAATCTGAA+GGG - chr8_1:1994663-1994682 Msa1172120:three_prime_UTR 40.0%
CCTCAAAAGAAACTCCATGT+TGG + chr8_1:1995080-1995099 None:intergenic 40.0%
! CCAACATGGAGTTTCTTTTG+AGG - chr8_1:1995077-1995096 Msa1172120:three_prime_UTR 40.0%
GTGATTGCTAATGTTGCTGA+AGG - chr8_1:1995174-1995193 Msa1172120:three_prime_UTR 40.0%
!! ATTGCTGCGTTTTGCTGATT+TGG - chr8_1:1995385-1995404 Msa1172120:three_prime_UTR 40.0%
AAACATAGGCACTTCAGCTT+TGG + chr8_1:1995480-1995499 None:intergenic 40.0%
CGTTTATTTCGCTACTATGC+TGG - chr8_1:1995503-1995522 Msa1172120:three_prime_UTR 40.0%
TATTTCGCTACTATGCTGGT+AGG - chr8_1:1995507-1995526 Msa1172120:three_prime_UTR 40.0%
GGTTGGGCAGATAAAATTCA+TGG - chr8_1:1995627-1995646 Msa1172120:three_prime_UTR 40.0%
ACATGATAATCTCCATCAGC+CGG + chr8_1:1995663-1995682 None:intergenic 40.0%
! CAATTGGTTCATGCAATGTC+TGG + chr8_1:1995686-1995705 None:intergenic 40.0%
CAGACATTGCATGAACCAAT+TGG - chr8_1:1995684-1995703 Msa1172120:three_prime_UTR 40.0%
ATTTGTCCTGCTACACCAAT+TGG + chr8_1:1995702-1995721 None:intergenic 40.0%
TTCAGAAGTCTTGAGGACAA+TGG + chr8_1:1995793-1995812 None:intergenic 40.0%
GTGTTTGTTCAGAAGTCTTG+AGG + chr8_1:1995800-1995819 None:intergenic 40.0%
TTCTGAACAAACACCGCTAA+CGG - chr8_1:1995806-1995825 Msa1172120:three_prime_UTR 40.0%
TGTGGCAAAACTACTTCATG+AGG - chr8_1:1995836-1995855 Msa1172120:three_prime_UTR 40.0%
TGACATCAAAGCATGGCTTA+CGG + chr8_1:1995874-1995893 None:intergenic 40.0%
GAGGTCAAAAACTAAAGGCA+AGG + chr8_1:1995945-1995964 None:intergenic 40.0%
! TAATCTTCACACTTTTGGGC+AGG - chr8_1:1996059-1996078 Msa1172120:CDS 40.0%
ACTATATTCAGAACACCTGG+GGG + chr8_1:1996093-1996112 None:intergenic 40.0%
! ACATCCATATGACTTGCAAG+AGG + chr8_1:1996144-1996163 None:intergenic 40.0%
TCTTGCAAGTCATATGGATG+TGG - chr8_1:1996143-1996162 Msa1172120:CDS 40.0%
AAGTCATATGGATGTGGACA+AGG - chr8_1:1996149-1996168 Msa1172120:CDS 40.0%
! ATTTTGCAGCTAGCATTCAC+TGG - chr8_1:1996514-1996533 Msa1172120:intron 40.0%
! CAGCTCAAGTACAGTTTTTC+CGG + chr8_1:1996551-1996570 None:intergenic 40.0%
AAGCCAGTGACATTAGAACT+TGG - chr8_1:1996589-1996608 Msa1172120:CDS 40.0%
CAGTGACATTAGAACTTGGA+GGG - chr8_1:1996593-1996612 Msa1172120:CDS 40.0%
! CTTATGCTGGATGCTTTTCA+GGG - chr8_1:1996762-1996781 Msa1172120:five_prime_UTR 40.0%
! TTATGCTGGATGCTTTTCAG+GGG - chr8_1:1996763-1996782 Msa1172120:five_prime_UTR 40.0%
ATAGATACGCTCATGTACGA+AGG + chr8_1:1996814-1996833 None:intergenic 40.0%
GCGTATCTATGATGAGTTCT+TGG - chr8_1:1996824-1996843 Msa1172120:five_prime_UTR 40.0%
TGCTCTACACCCTTCTTAAA+TGG + chr8_1:1996891-1996910 None:intergenic 40.0%
! TTTAAGAAGGGTGTAGAGCA+AGG - chr8_1:1996891-1996910 Msa1172120:five_prime_UTR 40.0%
GACAAGGAACATAGACCTAT+AGG + chr8_1:1996968-1996987 None:intergenic 40.0%
GTCCACAATACACGATCTTA+CGG + chr8_1:1997311-1997330 None:intergenic 40.0%
TACCCATACTAAACGTACCT+AGG - chr8_1:1997528-1997547 Msa1172120:five_prime_UTR 40.0%
CTTCCTAGGTACGTTTAGTA+TGG + chr8_1:1997534-1997553 None:intergenic 40.0%
ATGCACATGCTAAACTTCCT+AGG + chr8_1:1997548-1997567 None:intergenic 40.0%
TTAGCAAGCTAGTAGCTGAA+TGG + chr8_1:1997748-1997767 None:intergenic 40.0%
GTTACCTATAGCCTAGGATT+AGG + chr8_1:1997834-1997853 None:intergenic 40.0%
ACTTCTTATACGTGTCATGG+CGG - chr8_1:1997991-1998010 Msa1172120:five_prime_UTR 40.0%
GATTCTAAACCGGACGATTA+GGG - chr8_1:1998090-1998109 Msa1172120:five_prime_UTR 40.0%
ATTCTAAACCGGACGATTAG+GGG - chr8_1:1998091-1998110 Msa1172120:five_prime_UTR 40.0%
ATATGCCGATGACGATCTTA+GGG + chr8_1:1998119-1998138 None:intergenic 40.0%
!! TCTTACTGTCATTCTAGCTC+TGG - chr8_1:1998191-1998210 Msa1172120:five_prime_UTR 40.0%
ATTCTTGACGATCTACGTCA+AGG - chr8_1:1998238-1998257 Msa1172120:five_prime_UTR 40.0%
! TAGGTTCCATCGGTTAGATA+GGG + chr8_1:1998395-1998414 None:intergenic 40.0%
! ATAGGTTCCATCGGTTAGAT+AGG + chr8_1:1998396-1998415 None:intergenic 40.0%
TAACCGATGGAACCTATCTA+AGG - chr8_1:1998399-1998418 Msa1172120:five_prime_UTR 40.0%
! CCGTTGGTTATTCCTTAGAT+AGG + chr8_1:1998414-1998433 None:intergenic 40.0%
TTCCTATACGATCCAACTAG+AGG - chr8_1:1998653-1998672 Msa1172120:five_prime_UTR 40.0%
TACCTCTAGTTGGATCGTAT+AGG + chr8_1:1998658-1998677 None:intergenic 40.0%
! CACTCTAGCTTCTATACGAA+GGG - chr8_1:1998749-1998768 Msa1172120:five_prime_UTR 40.0%
! TCAATGTGCTTTTGGCATGT+TGG + chr8_1:1999083-1999102 None:intergenic 40.0%
! ATGCCAAAAGCACATTGACA+AGG - chr8_1:1999085-1999104 Msa1172120:five_prime_UTR 40.0%
AAGCACATTGACAAGGTTAG+AGG - chr8_1:1999092-1999111 Msa1172120:five_prime_UTR 40.0%
AATAGCGAAATTCTTCAGGC+AGG + chr8_1:1999147-1999166 None:intergenic 40.0%
CGCTAATAGCGAAATTCTTC+AGG + chr8_1:1999151-1999170 None:intergenic 40.0%
! CGAAATTTTCGCTAATAGCG+TGG - chr8_1:1999169-1999188 Msa1172120:five_prime_UTR 40.0%
AATTGGTCAAAGGGGCTTTA+GGG - chr8_1:1999334-1999353 Msa1172120:five_prime_UTR 40.0%
ACAAGAGATAACACAACCCA+AGG - chr8_1:1999393-1999412 Msa1172120:five_prime_UTR 40.0%
CAAGAGATAACACAACCCAA+GGG - chr8_1:1999394-1999413 Msa1172120:five_prime_UTR 40.0%
GCAAGAAACACATGAAGGAA+AGG + chr8_1:1999542-1999561 None:intergenic 40.0%
AGCAAGCAAGAAACACATGA+AGG + chr8_1:1999547-1999566 None:intergenic 40.0%
CTCCTAATCATGATCATGCA+TGG + chr8_1:1999583-1999602 None:intergenic 40.0%
CATGCATGATCATGATTAGG+AGG - chr8_1:1999581-1999600 Msa1172120:five_prime_UTR 40.0%
GTTTGGGTGATAAAAAGGAG+AGG - chr8_1:1999606-1999625 Msa1172120:five_prime_UTR 40.0%
TTGGGTGATAAAAAGGAGAG+GGG - chr8_1:1999608-1999627 Msa1172120:five_prime_UTR 40.0%
ACTTCTCTTTCTCTCTCTCT+AGG + chr8_1:1999679-1999698 None:intergenic 40.0%
AGAGCTATATAAGGCCACAA+GGG + chr8_1:1999721-1999740 None:intergenic 40.0%
AAGAGCTATATAAGGCCACA+AGG + chr8_1:1999722-1999741 None:intergenic 40.0%
TGGGTTTAAGTATCAGTGTC+AGG + chr8_1:1999764-1999783 None:intergenic 40.0%
CAATGACATCAGTCAGGTAT+GGG + chr8_1:1999783-1999802 None:intergenic 40.0%
TCAATGACATCAGTCAGGTA+TGG + chr8_1:1999784-1999803 None:intergenic 40.0%
ACTAACAAGCGGGATATTAC+AGG - chr8_1:1999875-1999894 Msa1172120:five_prime_UTR 40.0%
GCCACACTACAAATATTCCA+AGG + chr8_1:2000124-2000143 None:intergenic 40.0%
CATTGATGAAGTGATACGAC+GGG - chr8_1:2000194-2000213 Msa1172120:intron 40.0%
CTCATCTTGTAACCACCAAA+AGG + chr8_1:2000351-2000370 None:intergenic 40.0%
! TTTGGTGGTTACAAGATGAG+TGG - chr8_1:2000351-2000370 Msa1172120:five_prime_UTR 40.0%
! TTGGTGGTTACAAGATGAGT+GGG - chr8_1:2000352-2000371 Msa1172120:five_prime_UTR 40.0%
TACAATAGTTACAACCACGC+AGG + chr8_1:2000453-2000472 None:intergenic 40.0%
CTCGAGATCGTTGTAAATCA+AGG + chr8_1:2000551-2000570 None:intergenic 40.0%
GTGCTGTGGCAGTCTTAAAA+AGG + chr8_1:1987885-1987904 None:intergenic 45.0%
GTCTCTACCTTTACCCTTCA+AGG - chr8_1:1987920-1987939 Msa1172120:three_prime_UTR 45.0%
CAACTACCCTTGAAGGGTAA+AGG + chr8_1:1987930-1987949 None:intergenic 45.0%
CATACATCATGTGAGGACCA+GGG + chr8_1:1988008-1988027 None:intergenic 45.0%
TCCTCACATGATGTATGCCA+TGG - chr8_1:1988011-1988030 Msa1172120:three_prime_UTR 45.0%
CCTCACATGATGTATGCCAT+GGG - chr8_1:1988012-1988031 Msa1172120:three_prime_UTR 45.0%
TGTAGATGAGTGTGTGGTGT+GGG + chr8_1:1988080-1988099 None:intergenic 45.0%
GATGTAATCAGCAACGGTAG+AGG + chr8_1:1988181-1988200 None:intergenic 45.0%
!! GGTGGGACTAGCTAATAATG+TGG - chr8_1:1988838-1988857 Msa1172120:intron 45.0%
TAATCGGAGACAAGCGAATG+AGG + chr8_1:1988888-1988907 None:intergenic 45.0%
GTCGAAGAGACTTCTACAAG+CGG - chr8_1:1988937-1988956 Msa1172120:intron 45.0%
TCCCAAATTCAGAGACATCC+GGG - chr8_1:1988969-1988988 Msa1172120:intron 45.0%
! TGCTTTTAACAAGTCTCGCC+CGG + chr8_1:1988990-1989009 None:intergenic 45.0%
TGTGCATTCTGTTCACGTAG+GGG + chr8_1:1989104-1989123 None:intergenic 45.0%
GTTGTGCATTCTGTTCACGT+AGG + chr8_1:1989106-1989125 None:intergenic 45.0%
ACGTGAACAGAATGCACAAC+CGG - chr8_1:1989106-1989125 Msa1172120:intron 45.0%
ACAGAATGCACAACCGGTAA+AGG - chr8_1:1989112-1989131 Msa1172120:intron 45.0%
! GGGAGTTTTTGTGCTTGCAA+AGG + chr8_1:1989143-1989162 None:intergenic 45.0%
CATGTGTATACGCGATGAAG+AGG + chr8_1:1989164-1989183 None:intergenic 45.0%
CACTTGAATCTGCCTTGATG+AGG - chr8_1:1989232-1989251 Msa1172120:intron 45.0%
! AGTAGGTTGGCAGAAGCTAA+CGG + chr8_1:1989385-1989404 None:intergenic 45.0%
AGGAGCTGATATCAGTAGGT+TGG + chr8_1:1989398-1989417 None:intergenic 45.0%
CCTACTGATATCAGCTCCTT+CGG - chr8_1:1989399-1989418 Msa1172120:intron 45.0%
! AAAGCTTTGGCAAGACGTGT+CGG + chr8_1:1989524-1989543 None:intergenic 45.0%
GTGAAAGTTCCTGCACCAAA+AGG - chr8_1:1989602-1989621 Msa1172120:intron 45.0%
ATCTGCGGAAAGCTGGATAT+TGG + chr8_1:1989894-1989913 None:intergenic 45.0%
AAGTGCCTACAGACTTTGTG+TGG + chr8_1:1989938-1989957 None:intergenic 45.0%
ATTTGGAAGGTGGAGAGGAA+CGG + chr8_1:1989976-1989995 None:intergenic 45.0%
!! AGATGCCTTGATTTGGAAGG+TGG + chr8_1:1989986-1990005 None:intergenic 45.0%
CCAAGTATTCGATGATGCCT+CGG + chr8_1:1990052-1990071 None:intergenic 45.0%
!! TCATTCTAAGACGTGGAACG+TGG + chr8_1:1990085-1990104 None:intergenic 45.0%
! GCGCATCTATTGCGGAATTT+TGG + chr8_1:1990129-1990148 None:intergenic 45.0%
GTTAGGCAATGGAGCAAAAC+TGG + chr8_1:1990169-1990188 None:intergenic 45.0%
TTTGCTCCATTGCCTAACCA+AGG - chr8_1:1990171-1990190 Msa1172120:intron 45.0%
GATGAACCTTGGTTAGGCAA+TGG + chr8_1:1990180-1990199 None:intergenic 45.0%
GTCATAATCCAAGTTACGCG+TGG + chr8_1:1990284-1990303 None:intergenic 45.0%
ATACGAGAAGCCAACGTATG+AGG - chr8_1:1990354-1990373 Msa1172120:intron 45.0%
! CTTGTTTACCAAGCATTGCC+AGG - chr8_1:1990397-1990416 Msa1172120:intron 45.0%
! AAGCATTGCCAGGTTGAAAG+CGG - chr8_1:1990407-1990426 Msa1172120:intron 45.0%
! CACAAGACCAATGGAGGTAT+GGG + chr8_1:1990447-1990466 None:intergenic 45.0%
TTCTCGATGCACAAGACCAA+TGG + chr8_1:1990456-1990475 None:intergenic 45.0%
!! GAGGTATTCACTGGCTTTCT+TGG + chr8_1:1990485-1990504 None:intergenic 45.0%
!! AATGCTTTTTGGTGGGGTCA+CGG + chr8_1:1990522-1990541 None:intergenic 45.0%
! AGACGGAATGGCTTGCAAAA+CGG - chr8_1:1990602-1990621 Msa1172120:intron 45.0%
!! AGCAAGTGTCTCTCTAAAGC+GGG + chr8_1:1990648-1990667 None:intergenic 45.0%
! CAGCAAGTGTCTCTCTAAAG+CGG + chr8_1:1990649-1990668 None:intergenic 45.0%
TGGTAAGCCCAGATACTTAC+CGG - chr8_1:1990746-1990765 Msa1172120:intron 45.0%
ATGGGAGTTCATGCTGTTCT+AGG + chr8_1:1990774-1990793 None:intergenic 45.0%
! CGGTAAACTTATCGATTGGC+CGG - chr8_1:1990857-1990876 Msa1172120:intron 45.0%
AATAAGACGTGCAGAAGCCA+GGG + chr8_1:1991027-1991046 None:intergenic 45.0%
TAATAAGACGTGCAGAAGCC+AGG + chr8_1:1991028-1991047 None:intergenic 45.0%
TGTTCATCATTTGTGCGGAG+GGG + chr8_1:1991061-1991080 None:intergenic 45.0%
!! AACAGTGGACTACTCTGTGT+TGG + chr8_1:1991156-1991175 None:intergenic 45.0%
AAAGGAGTGATGGCTAGGAT+GGG + chr8_1:1991221-1991240 None:intergenic 45.0%
ATTGGTTGGGACTACCTGAA+AGG + chr8_1:1991239-1991258 None:intergenic 45.0%
!! AGCGTATGATCGCATTGGTT+GGG + chr8_1:1991252-1991271 None:intergenic 45.0%
! AAGCGTATGATCGCATTGGT+TGG + chr8_1:1991253-1991272 None:intergenic 45.0%
CATGGAGTGGATAACTTCGA+TGG - chr8_1:1991328-1991347 Msa1172120:three_prime_UTR 45.0%
GCACTCTACTTGTGAAGTCT+AGG + chr8_1:1991673-1991692 None:intergenic 45.0%
!!! CTTGGATTTTGAGCACTGGT+TGG - chr8_1:1991904-1991923 Msa1172120:three_prime_UTR 45.0%
ACAACAGCATCTGGGTTAAC+TGG + chr8_1:1991945-1991964 None:intergenic 45.0%
CCAACTACAACAACAGCATC+TGG + chr8_1:1991954-1991973 None:intergenic 45.0%
CCAGATGCTGTTGTTGTAGT+TGG - chr8_1:1991951-1991970 Msa1172120:three_prime_UTR 45.0%
!! AAGTGTTGGTGAGTGGAAAG+CGG + chr8_1:1992035-1992054 None:intergenic 45.0%
ATTGGAGAAGAGGCTGATCT+TGG - chr8_1:1992406-1992425 Msa1172120:three_prime_UTR 45.0%
GCCAGTCCAATCTGATTACT+AGG - chr8_1:1992562-1992581 Msa1172120:intron 45.0%
TGGTGAGTTATACAGGTGAC+TGG + chr8_1:1992606-1992625 None:intergenic 45.0%
! GCCCGTTGACTATGAAATTC+TGG - chr8_1:1992828-1992847 Msa1172120:three_prime_UTR 45.0%
! CTAATGGTGGAGTCGTAACT+TGG + chr8_1:1992920-1992939 None:intergenic 45.0%
! GGTAGCTCATATGGTTTGCA+AGG + chr8_1:1993875-1993894 None:intergenic 45.0%
CGGGAAGAAGACAAACACAA+AGG + chr8_1:1994037-1994056 None:intergenic 45.0%
GAGAATTGGGATGACGTTTG+CGG + chr8_1:1994091-1994110 None:intergenic 45.0%
ACGTGAATGTGATTGCCTGT+CGG + chr8_1:1994449-1994468 None:intergenic 45.0%
CATTCACGTGCTCTCAATCA+TGG - chr8_1:1994460-1994479 Msa1172120:three_prime_UTR 45.0%
CCACACACAGTTACAGTTAC+AGG + chr8_1:1994589-1994608 None:intergenic 45.0%
CCTGTAACTGTAACTGTGTG+TGG - chr8_1:1994586-1994605 Msa1172120:three_prime_UTR 45.0%
! CCCTTCAGATTTTCTTCCTG+AGG + chr8_1:1994666-1994685 None:intergenic 45.0%
AAGTTTGTGGATGCTGCATC+AGG - chr8_1:1994782-1994801 Msa1172120:three_prime_UTR 45.0%
CAACACTTGATCCACGTACA+GGG - chr8_1:1995148-1995167 Msa1172120:three_prime_UTR 45.0%
AACACTTGATCCACGTACAG+GGG - chr8_1:1995149-1995168 Msa1172120:three_prime_UTR 45.0%
!! AGGCCTTTGATAATGGACCT+TGG - chr8_1:1995238-1995257 Msa1172120:three_prime_UTR 45.0%
AGGCCAAGGTCCATTATCAA+AGG + chr8_1:1995244-1995263 None:intergenic 45.0%
! TAGGCACTCATTTTAGGCCA+AGG + chr8_1:1995258-1995277 None:intergenic 45.0%
GCCTATGTAAGCATTTCCTG+CGG - chr8_1:1995273-1995292 Msa1172120:three_prime_UTR 45.0%
TCCGCAGGAAATGCTTACAT+AGG + chr8_1:1995277-1995296 None:intergenic 45.0%
CAATGATGAGATTGCAGCTC+TGG - chr8_1:1995418-1995437 Msa1172120:three_prime_UTR 45.0%
CATGATAATCTCCATCAGCC+GGG + chr8_1:1995662-1995681 None:intergenic 45.0%
CATGAACCAATTGGTGTAGC+AGG - chr8_1:1995693-1995712 Msa1172120:three_prime_UTR 45.0%
GTATTACCAGTTGCTAGAGC+TGG + chr8_1:1995771-1995790 None:intergenic 45.0%
GACATCAAAGCATGGCTTAC+GGG + chr8_1:1995873-1995892 None:intergenic 45.0%
CAGCATGCTAGCCAAAATTG+AGG + chr8_1:1995977-1995996 None:intergenic 45.0%
TGCACCTCTTGCAAGTCATA+TGG - chr8_1:1996137-1996156 Msa1172120:CDS 45.0%
CGGAAAAACTGTACTTGAGC+TGG - chr8_1:1996549-1996568 Msa1172120:CDS 45.0%
! CCTCCAAGTTCTAATGTCAC+TGG + chr8_1:1996595-1996614 None:intergenic 45.0%
CCAGTGACATTAGAACTTGG+AGG - chr8_1:1996592-1996611 Msa1172120:CDS 45.0%
ATCGCCTTTCATCGTTTGTG+AGG - chr8_1:1996618-1996637 Msa1172120:CDS 45.0%
GCATCCTCACAAACGATGAA+AGG + chr8_1:1996625-1996644 None:intergenic 45.0%
!! CCTGAAAAGCATCCAGCATA+AGG + chr8_1:1996764-1996783 None:intergenic 45.0%
! CCTTATGCTGGATGCTTTTC+AGG - chr8_1:1996761-1996780 Msa1172120:five_prime_UTR 45.0%
TACGCTCATGTACGAAGGTA+CGG + chr8_1:1996809-1996828 None:intergenic 45.0%
CTACACTTGAATGTGGAGGT+GGG - chr8_1:1997190-1997209 Msa1172120:five_prime_UTR 45.0%
CACCGTAAGATCGTGTATTG+TGG - chr8_1:1997306-1997325 Msa1172120:five_prime_UTR 45.0%
CTAGGCTATAGGTAACCTCA+GGG - chr8_1:1997838-1997857 Msa1172120:five_prime_UTR 45.0%
TAGGCTATAGGTAACCTCAG+GGG - chr8_1:1997839-1997858 Msa1172120:five_prime_UTR 45.0%
CAGGTAGTATTGTAGACACG+TGG + chr8_1:1997878-1997897 None:intergenic 45.0%
GTGTCTACAATACTACCTGC+CGG - chr8_1:1997879-1997898 Msa1172120:five_prime_UTR 45.0%
CCCACACACGTATAATCAAC+CGG + chr8_1:1997901-1997920 None:intergenic 45.0%
CCGGTTGATTATACGTGTGT+GGG - chr8_1:1997898-1997917 Msa1172120:five_prime_UTR 45.0%
CGGTTGATTATACGTGTGTG+GGG - chr8_1:1997899-1997918 Msa1172120:five_prime_UTR 45.0%
TGGGGACTTGCATACTTAGA+CGG - chr8_1:1997917-1997936 Msa1172120:five_prime_UTR 45.0%
CGATTCTAAACCGGACGATT+AGG - chr8_1:1998089-1998108 Msa1172120:five_prime_UTR 45.0%
GATATGCCGATGACGATCTT+AGG + chr8_1:1998120-1998139 None:intergenic 45.0%
! AGTTCATTTTACGGAGAGCC+CGG - chr8_1:1998346-1998365 Msa1172120:five_prime_UTR 45.0%
GTTAGATAGGGATTGTGCTC+GGG + chr8_1:1998383-1998402 None:intergenic 45.0%
GGTTAGATAGGGATTGTGCT+CGG + chr8_1:1998384-1998403 None:intergenic 45.0%
CACAATCCCTATCTAACCGA+TGG - chr8_1:1998386-1998405 Msa1172120:five_prime_UTR 45.0%
GGTTTCCATTAGGTGAAACG+GGG + chr8_1:1998473-1998492 None:intergenic 45.0%
GGGTTTCCATTAGGTGAAAC+GGG + chr8_1:1998474-1998493 None:intergenic 45.0%
GGGGTTTCCATTAGGTGAAA+CGG + chr8_1:1998475-1998494 None:intergenic 45.0%
TTGGATCGTATAGGAATCCG+AGG + chr8_1:1998649-1998668 None:intergenic 45.0%
! GCACTCTAGCTTCTATACGA+AGG - chr8_1:1998748-1998767 Msa1172120:five_prime_UTR 45.0%
GTTCTTGACAAGCTATGCCA+AGG - chr8_1:1998845-1998864 Msa1172120:five_prime_UTR 45.0%
AGGGAATGAAAGTAGAGCCT+TGG + chr8_1:1998865-1998884 None:intergenic 45.0%
!! GGAGTTTTAGCCGAATACTC+GGG + chr8_1:1998905-1998924 None:intergenic 45.0%
!! GGGAGTTTTAGCCGAATACT+CGG + chr8_1:1998906-1998925 None:intergenic 45.0%
AGTATGGCAAGAATGGCACA+GGG + chr8_1:1998926-1998945 None:intergenic 45.0%
AAGTATGGCAAGAATGGCAC+AGG + chr8_1:1998927-1998946 None:intergenic 45.0%
! TGGCATGTTGGCCCATTTTA+GGG + chr8_1:1999071-1999090 None:intergenic 45.0%
! TTGGCATGTTGGCCCATTTT+AGG + chr8_1:1999072-1999091 None:intergenic 45.0%
TCGCTAATAGCGTGGTTCTT+CGG - chr8_1:1999177-1999196 Msa1172120:five_prime_UTR 45.0%
GGTGCATTGCAGGATCAATT+TGG + chr8_1:1999244-1999263 None:intergenic 45.0%
GAATTGGTCAAAGGGGCTTT+AGG - chr8_1:1999333-1999352 Msa1172120:five_prime_UTR 45.0%
GGTTTGAGCTTGGAACTTGA+AGG + chr8_1:1999465-1999484 None:intergenic 45.0%
GTGATAAAAAGGAGAGGGGA+GGG - chr8_1:1999612-1999631 Msa1172120:five_prime_UTR 45.0%
TGAATGGAAAATGGCCCTTG+TGG - chr8_1:1999704-1999723 Msa1172120:five_prime_UTR 45.0%
ACACGTTATGGTTTAGCAGC+AGG - chr8_1:2000225-2000244 Msa1172120:intron 45.0%
! GATGCTGCAATTCCTTTTGG+TGG - chr8_1:2000336-2000355 Msa1172120:five_prime_UTR 45.0%
GGTTACAAGATGAGTGGGAT+TGG - chr8_1:2000357-2000376 Msa1172120:five_prime_UTR 45.0%
CAGTCTTCACAACTATCTGC+AGG - chr8_1:2000398-2000417 Msa1172120:five_prime_UTR 45.0%
CTATCTGCAGGTAAAAGCTG+TGG - chr8_1:2000410-2000429 Msa1172120:five_prime_UTR 45.0%
ACCACGCAGGATTGTTTAGT+GGG + chr8_1:2000440-2000459 None:intergenic 45.0%
AACCACGCAGGATTGTTTAG+TGG + chr8_1:2000441-2000460 None:intergenic 45.0%
!!! TTTTATTTTTTAATTATTGT+TGG - chr8_1:1993203-1993222 Msa1172120:intron 5.0%
!! TTATTATTATATTGAAAAAA+TGG + chr8_1:1994243-1994262 None:intergenic 5.0%
GCATACATCATGTGAGGACC+AGG + chr8_1:1988009-1988028 None:intergenic 50.0%
CCCATGGCATACATCATGTG+AGG + chr8_1:1988015-1988034 None:intergenic 50.0%
ATGATGTATGCCATGGGCTC+AGG - chr8_1:1988018-1988037 Msa1172120:three_prime_UTR 50.0%
TAAACACAAGCCTGAGCCCA+TGG + chr8_1:1988031-1988050 None:intergenic 50.0%
GCTAAACCTGCCGTTACTGA+CGG + chr8_1:1988058-1988077 None:intergenic 50.0%
GTGTAGATGAGTGTGTGGTG+TGG + chr8_1:1988081-1988100 None:intergenic 50.0%
!! GAGTGGCTTGTCTCCCTTTT+TGG - chr8_1:1988141-1988160 Msa1172120:three_prime_UTR 50.0%
!! TGGCTTGTCTCCCTTTTTGG+TGG - chr8_1:1988144-1988163 Msa1172120:three_prime_UTR 50.0%
GCCCGGATGTCTCTGAATTT+GGG + chr8_1:1988973-1988992 None:intergenic 50.0%
TGTTCACGTAGGGGAAGCTA+TGG + chr8_1:1989095-1989114 None:intergenic 50.0%
CATCCTCTTTGTCATGGCAG+AGG + chr8_1:1989258-1989277 None:intergenic 50.0%
CCGAAGGAGCTGATATCAGT+AGG + chr8_1:1989402-1989421 None:intergenic 50.0%
AGCAGCAACAACATGTCCGA+AGG + chr8_1:1989418-1989437 None:intergenic 50.0%
CTCTTCACCTTGTAGAGGAC+TGG + chr8_1:1989474-1989493 None:intergenic 50.0%
TAGGGCTCTTCACCTTGTAG+AGG + chr8_1:1989479-1989498 None:intergenic 50.0%
AGTGGCGCAGGTTGTAGATA+GGG + chr8_1:1989497-1989516 None:intergenic 50.0%
! CTGCCCTTTTATGGAGCATG+TGG + chr8_1:1989561-1989580 None:intergenic 50.0%
GTGGATTCGAGCTGGAATGT+GGG + chr8_1:1989680-1989699 None:intergenic 50.0%
TGTGGATTCGAGCTGGAATG+TGG + chr8_1:1989681-1989700 None:intergenic 50.0%
ATCCTGTAAACGAACACGGG+TGG - chr8_1:1989795-1989814 Msa1172120:intron 50.0%
TCCTGTAAACGAACACGGGT+GGG - chr8_1:1989796-1989815 Msa1172120:intron 50.0%
CTGGATATTGGTCCGGGATT+TGG + chr8_1:1989882-1989901 None:intergenic 50.0%
GGAAAGCTGGATATTGGTCC+GGG + chr8_1:1989888-1989907 None:intergenic 50.0%
CGGAAAGCTGGATATTGGTC+CGG + chr8_1:1989889-1989908 None:intergenic 50.0%
ACTGTTCATCTGCGGAAAGC+TGG + chr8_1:1989901-1989920 None:intergenic 50.0%
CTCCTCCACACAAAGTCTGT+AGG - chr8_1:1989930-1989949 Msa1172120:intron 50.0%
TGCCTACAGACTTTGTGTGG+AGG + chr8_1:1989935-1989954 None:intergenic 50.0%
!! CCTTGATTTGGAAGGTGGAG+AGG + chr8_1:1989981-1990000 None:intergenic 50.0%
CCTCTCCACCTTCCAAATCA+AGG - chr8_1:1989978-1989997 Msa1172120:intron 50.0%
TTGTAAAATGGCTGCAGCCG+AGG - chr8_1:1990032-1990051 Msa1172120:intron 50.0%
! CCGAGGCATCATCGAATACT+TGG - chr8_1:1990049-1990068 Msa1172120:intron 50.0%
!! TTCTAAGACGTGGAACGTGG+AGG + chr8_1:1990082-1990101 None:intergenic 50.0%
ATTCCGCAATAGATGCGCGT+TGG - chr8_1:1990131-1990150 Msa1172120:intron 50.0%
TTGCCAACGCGCATCTATTG+CGG + chr8_1:1990137-1990156 None:intergenic 50.0%
GAGGATCTCGGTGGTGTATA+GGG + chr8_1:1990227-1990246 None:intergenic 50.0%
TTGTTAGAGGAGGATCTCGG+TGG + chr8_1:1990236-1990255 None:intergenic 50.0%
ATACTTCGCCACGCGTAACT+TGG - chr8_1:1990273-1990292 Msa1172120:intron 50.0%
GCTTTCAACCTGGCAATGCT+TGG + chr8_1:1990408-1990427 None:intergenic 50.0%
! TTGCCAGGTTGAAAGCGGTA+AGG - chr8_1:1990412-1990431 Msa1172120:intron 50.0%
AGACCTTACCGCTTTCAACC+TGG + chr8_1:1990418-1990437 None:intergenic 50.0%
GCACAAGACCAATGGAGGTA+TGG + chr8_1:1990448-1990467 None:intergenic 50.0%
TCGATGCACAAGACCAATGG+AGG + chr8_1:1990453-1990472 None:intergenic 50.0%
CTGGGCTTACCATCGATGAT+TGG + chr8_1:1990738-1990757 None:intergenic 50.0%
!! CTAGGCACCGGTAAGTATCT+GGG + chr8_1:1990756-1990775 None:intergenic 50.0%
!! TCTAGGCACCGGTAAGTATC+TGG + chr8_1:1990757-1990776 None:intergenic 50.0%
! GTTCATGCTGTTCTAGGCAC+CGG + chr8_1:1990768-1990787 None:intergenic 50.0%
GCTACTTATGAAGCAGCGTC+CGG + chr8_1:1990879-1990898 None:intergenic 50.0%
GCAAAAAGCAGATGGGTGAC+TGG - chr8_1:1990963-1990982 Msa1172120:intron 50.0%
AAAAGCAGATGGGTGACTGG+TGG - chr8_1:1990966-1990985 Msa1172120:intron 50.0%
!! GACAAACAGAAGTGCCACGA+AGG - chr8_1:1990997-1991016 Msa1172120:intron 50.0%
ATAAGACGTGCAGAAGCCAG+GGG + chr8_1:1991026-1991045 None:intergenic 50.0%
! TTGATTGGTCCCATCATCCC+GGG + chr8_1:1991122-1991141 None:intergenic 50.0%
! GTTGATTGGTCCCATCATCC+CGG + chr8_1:1991123-1991142 None:intergenic 50.0%
GACGATGTGTGTCGAAACAG+TGG + chr8_1:1991171-1991190 None:intergenic 50.0%
GAAAGGAGTGATGGCTAGGA+TGG + chr8_1:1991222-1991241 None:intergenic 50.0%
TCCTAGCCATCACTCCTTTC+AGG - chr8_1:1991222-1991241 Msa1172120:intron 50.0%
ACCTGAAAGGAGTGATGGCT+AGG + chr8_1:1991226-1991245 None:intergenic 50.0%
GGACTACCTGAAAGGAGTGA+TGG + chr8_1:1991231-1991250 None:intergenic 50.0%
!!! GGATTTTGAGCACTGGTTGG+TGG - chr8_1:1991907-1991926 Msa1172120:three_prime_UTR 50.0%
! ATAGGGTGGGAGAGAAGTGT+TGG + chr8_1:1992049-1992068 None:intergenic 50.0%
TCTGAAGAACTTGCCCTGCA+AGG + chr8_1:1992274-1992293 None:intergenic 50.0%
CCTCTTCTCCAATTGCTGGA+CGG + chr8_1:1992399-1992418 None:intergenic 50.0%
TCAGCCTCTTCTCCAATTGC+TGG + chr8_1:1992403-1992422 None:intergenic 50.0%
AGGGAATAAACCCGGACGTA+TGG + chr8_1:1994067-1994086 None:intergenic 50.0%
TTTGCGGCAGGGAATAAACC+CGG + chr8_1:1994075-1994094 None:intergenic 50.0%
TCACTTTCCCCACTCTTGTG+AGG + chr8_1:1994217-1994236 None:intergenic 50.0%
CAAGGACAAGAAACACCGAC+AGG - chr8_1:1994431-1994450 Msa1172120:three_prime_UTR 50.0%
CAATTCCTCAACAGCTGCAG+CGG + chr8_1:1994714-1994733 None:intergenic 50.0%
CCTGTACGTGGATCAAGTGT+TGG + chr8_1:1995150-1995169 None:intergenic 50.0%
CCAACACTTGATCCACGTAC+AGG - chr8_1:1995147-1995166 Msa1172120:three_prime_UTR 50.0%
! TGATGAGATTGCAGCTCTGG+AGG - chr8_1:1995421-1995440 Msa1172120:three_prime_UTR 50.0%
! AATTCATGGGCTGACAGTCC+CGG - chr8_1:1995641-1995660 Msa1172120:three_prime_UTR 50.0%
TTCACTGGATCGACAGACAC+CGG - chr8_1:1996529-1996548 Msa1172120:intron 50.0%
! ACGCTCATGTACGAAGGTAC+GGG + chr8_1:1996808-1996827 None:intergenic 50.0%
!! CGAGCTTTGAGACGTGTTGT+TGG - chr8_1:1996861-1996880 Msa1172120:five_prime_UTR 50.0%
AGCAGCGCTACACTTGAATG+TGG - chr8_1:1997183-1997202 Msa1172120:five_prime_UTR 50.0%
AGCGCTACACTTGAATGTGG+AGG - chr8_1:1997186-1997205 Msa1172120:five_prime_UTR 50.0%
GCTACACTTGAATGTGGAGG+TGG - chr8_1:1997189-1997208 Msa1172120:five_prime_UTR 50.0%
TGAATGTGGAGGTGGGAGAT+TGG - chr8_1:1997197-1997216 Msa1172120:five_prime_UTR 50.0%
GAATGTGGAGGTGGGAGATT+GGG - chr8_1:1997198-1997217 Msa1172120:five_prime_UTR 50.0%
GGTGGGAGATTGGGTTCAAA+AGG - chr8_1:1997207-1997226 Msa1172120:five_prime_UTR 50.0%
GCAGGATGACAGGGATTTCA+AGG + chr8_1:1997694-1997713 None:intergenic 50.0%
AAATCCCTGTCATCCTGCAG+CGG - chr8_1:1997696-1997715 Msa1172120:five_prime_UTR 50.0%
CCTGAGGTTACCTATAGCCT+AGG + chr8_1:1997840-1997859 None:intergenic 50.0%
CCTAGGCTATAGGTAACCTC+AGG - chr8_1:1997837-1997856 Msa1172120:five_prime_UTR 50.0%
GTAACCTCAGGGGAAACCTA+CGG - chr8_1:1997849-1997868 Msa1172120:five_prime_UTR 50.0%
CACACGTATAATCAACCGGC+AGG + chr8_1:1997897-1997916 None:intergenic 50.0%
GCCGGTTGATTATACGTGTG+TGG - chr8_1:1997897-1997916 Msa1172120:five_prime_UTR 50.0%
TTAGACGGTCGTGCATGCTA+GGG - chr8_1:1997932-1997951 Msa1172120:five_prime_UTR 50.0%
AGGGCGTATTCTTGGCATTG+CGG + chr8_1:1998034-1998053 None:intergenic 50.0%
CGATACGTAGGGCGTATTCT+TGG + chr8_1:1998042-1998061 None:intergenic 50.0%
AGAATACGCCCTACGTATCG+AGG - chr8_1:1998042-1998061 Msa1172120:five_prime_UTR 50.0%
GACTTAGGCCTCGATACGTA+GGG + chr8_1:1998053-1998072 None:intergenic 50.0%
AGACTTAGGCCTCGATACGT+AGG + chr8_1:1998054-1998073 None:intergenic 50.0%
TTAGGGTTCCCCTAATCGTC+CGG + chr8_1:1998102-1998121 None:intergenic 50.0%
GGGAACCCTAAGATCGTCAT+CGG - chr8_1:1998111-1998130 Msa1172120:five_prime_UTR 50.0%
! GTTCATTTTACGGAGAGCCC+GGG - chr8_1:1998347-1998366 Msa1172120:five_prime_UTR 50.0%
! TTCATTTTACGGAGAGCCCG+GGG - chr8_1:1998348-1998367 Msa1172120:five_prime_UTR 50.0%
GCTAACCCCGTTTCACCTAA+TGG - chr8_1:1998465-1998484 Msa1172120:five_prime_UTR 50.0%
TGGCTCAAGGGGTTTCCATT+AGG + chr8_1:1998483-1998502 None:intergenic 50.0%
! TCCACACTAGGTTGGCTCAA+GGG + chr8_1:1998495-1998514 None:intergenic 50.0%
CTCTTGTGTCCACACTAGGT+TGG + chr8_1:1998503-1998522 None:intergenic 50.0%
GTGTCTCTTGTGTCCACACT+AGG + chr8_1:1998507-1998526 None:intergenic 50.0%
CACGTCTTGCCATACTCGTA+TGG - chr8_1:1998726-1998745 Msa1172120:five_prime_UTR 50.0%
! GCTAGAGTGCCATACGAGTA+TGG + chr8_1:1998738-1998757 None:intergenic 50.0%
!!! ATGTTGGCCCATTTTAGGGC+CGG + chr8_1:1999067-1999086 None:intergenic 50.0%
CGCTAATAGCGTGGTTCTTC+GGG - chr8_1:1999178-1999197 Msa1172120:five_prime_UTR 50.0%
GGATGCTTATGGTGCATTGC+AGG + chr8_1:1999254-1999273 None:intergenic 50.0%
GAGATAACACAACCCAAGGG+TGG - chr8_1:1999397-1999416 Msa1172120:five_prime_UTR 50.0%
CCAAAGCTAGGGTTTGAGCT+TGG + chr8_1:1999475-1999494 None:intergenic 50.0%
CCAAGCTCAAACCCTAGCTT+TGG - chr8_1:1999472-1999491 Msa1172120:five_prime_UTR 50.0%
GGTGATAAAAAGGAGAGGGG+AGG - chr8_1:1999611-1999630 Msa1172120:five_prime_UTR 50.0%
TTTCCATCAGCTTCGTCCTG+TGG - chr8_1:1999827-1999846 Msa1172120:five_prime_UTR 50.0%
TTGTAGTGTGGCACGCAATG+TGG - chr8_1:2000132-2000151 Msa1172120:five_prime_UTR 50.0%
GCACAGCCAACACTTTGATG+CGG - chr8_1:2000268-2000287 Msa1172120:five_prime_UTR 50.0%
CACAGCCAACACTTTGATGC+GGG - chr8_1:2000269-2000288 Msa1172120:five_prime_UTR 50.0%
! ACAAGATGAGTGGGATTGGC+AGG - chr8_1:2000361-2000380 Msa1172120:five_prime_UTR 50.0%
! CAAGATGAGTGGGATTGGCA+GGG - chr8_1:2000362-2000381 Msa1172120:five_prime_UTR 50.0%
CCACGCAGGATTGTTTAGTG+GGG + chr8_1:2000439-2000458 None:intergenic 50.0%
TATTATGCCATGCCAGGCCC+TGG - chr8_1:1987988-1988007 Msa1172120:three_prime_UTR 55.0%
TAACCACCGTCAGTAACGGC+AGG - chr8_1:1988049-1988068 Msa1172120:three_prime_UTR 55.0%
AAACCTGCCGTTACTGACGG+TGG + chr8_1:1988055-1988074 None:intergenic 55.0%
TGAGGTAGCTCACACGCTAG+CGG + chr8_1:1988870-1988889 None:intergenic 55.0%
CGCCCGGATGTCTCTGAATT+TGG + chr8_1:1988974-1988993 None:intergenic 55.0%
TCATGGCAGAGGCCTCATCA+AGG + chr8_1:1989247-1989266 None:intergenic 55.0%
AGGCCTCTGCCATGACAAAG+AGG - chr8_1:1989252-1989271 Msa1172120:intron 55.0%
! CTGCTGTGTGCTATTGCAGC+AGG - chr8_1:1989433-1989452 Msa1172120:intron 55.0%
CCTTGTAGAGGACTGGAGCA+TGG + chr8_1:1989467-1989486 None:intergenic 55.0%
CCATGCTCCAGTCCTCTACA+AGG - chr8_1:1989464-1989483 Msa1172120:intron 55.0%
CAGTGGCGCAGGTTGTAGAT+AGG + chr8_1:1989498-1989517 None:intergenic 55.0%
GCAAGACGTGTCGGAAACAG+TGG + chr8_1:1989515-1989534 None:intergenic 55.0%
AATCCACACCTGCACCGCAA+AGG - chr8_1:1989693-1989712 Msa1172120:intron 55.0%
CGATTGTTCCTTTGCGGTGC+AGG + chr8_1:1989704-1989723 None:intergenic 55.0%
TCCCACCCGTGTTCGTTTAC+AGG + chr8_1:1989800-1989819 None:intergenic 55.0%
GTAAACGAACACGGGTGGGA+AGG - chr8_1:1989800-1989819 Msa1172120:intron 55.0%
TCTCGGTGGTGTATAGGGTC+AGG + chr8_1:1990222-1990241 None:intergenic 55.0%
GGAGGATCTCGGTGGTGTAT+AGG + chr8_1:1990228-1990247 None:intergenic 55.0%
CACGGTGGGTCTAACAATCG+AGG + chr8_1:1990504-1990523 None:intergenic 55.0%
!! CTTTTTGGTGGGGTCACGGT+GGG + chr8_1:1990518-1990537 None:intergenic 55.0%
!! TCTCTCTAAAGCGGGTCGAG+AGG + chr8_1:1990640-1990659 None:intergenic 55.0%
! TAGACTGCATGACTTGCGCC+TGG - chr8_1:1990904-1990923 Msa1172120:intron 55.0%
CGTGGCACTTCTGTTTGTCG+TGG + chr8_1:1990996-1991015 None:intergenic 55.0%
! TGATTGGTCCCATCATCCCG+GGG + chr8_1:1991121-1991140 None:intergenic 55.0%
!! TTGAGCACTGGTTGGTGGCA+AGG - chr8_1:1991912-1991931 Msa1172120:three_prime_UTR 55.0%
!! GGGAGAGAAGTGTTGGTGAG+TGG + chr8_1:1992042-1992061 None:intergenic 55.0%
CTTCTTGCGCGCCCTACATT+TGG + chr8_1:1992143-1992162 None:intergenic 55.0%
ATGTAGGGCGCGCAAGAAGT+TGG - chr8_1:1992144-1992163 Msa1172120:intron 55.0%
TGTAGGGCGCGCAAGAAGTT+GGG - chr8_1:1992145-1992164 Msa1172120:intron 55.0%
CCGTCCAGCAATTGGAGAAG+AGG - chr8_1:1992396-1992415 Msa1172120:three_prime_UTR 55.0%
CCGGACGTATGGAGAAAAGC+GGG + chr8_1:1994056-1994075 None:intergenic 55.0%
!! CCCGCTTTTCTCCATACGTC+CGG - chr8_1:1994053-1994072 Msa1172120:three_prime_UTR 55.0%
CCCGGACGTATGGAGAAAAG+CGG + chr8_1:1994057-1994076 None:intergenic 55.0%
!! CCGCTTTTCTCCATACGTCC+GGG - chr8_1:1994054-1994073 Msa1172120:three_prime_UTR 55.0%
TTGGGATGACGTTTGCGGCA+GGG + chr8_1:1994086-1994105 None:intergenic 55.0%
ATTGGGATGACGTTTGCGGC+AGG + chr8_1:1994087-1994106 None:intergenic 55.0%
TCTCTGCTTCGCTCACCACT+AGG - chr8_1:1994548-1994567 Msa1172120:three_prime_UTR 55.0%
GCAATCACTTCCCCTGTACG+TGG + chr8_1:1995162-1995181 None:intergenic 55.0%
GCTCGCGAGGCCTTTGATAA+TGG - chr8_1:1995231-1995250 Msa1172120:three_prime_UTR 55.0%
TGCAAGAAAGGACACTCCGC+AGG + chr8_1:1995292-1995311 None:intergenic 55.0%
!! AGATTGCAGCTCTGGAGGCA+TGG - chr8_1:1995426-1995445 Msa1172120:three_prime_UTR 55.0%
!! GCTCTGGAGGCATGGAACAA+TGG - chr8_1:1995434-1995453 Msa1172120:three_prime_UTR 55.0%
! GTTGGACCAGCTCTAGCAAC+TGG - chr8_1:1995762-1995781 Msa1172120:three_prime_UTR 55.0%
! ACCGCTAACGGCTCTAGTTG+TGG - chr8_1:1995818-1995837 Msa1172120:three_prime_UTR 55.0%
GCCACAACTAGAGCCGTTAG+CGG + chr8_1:1995822-1995841 None:intergenic 55.0%
! CTTCACACTTTTGGGCAGGC+CGG - chr8_1:1996063-1996082 Msa1172120:CDS 55.0%
TCTGGCTATGGTCCAACTGC+TGG - chr8_1:1996114-1996133 Msa1172120:CDS 55.0%
AATCCCTGTCATCCTGCAGC+GGG - chr8_1:1997697-1997716 Msa1172120:five_prime_UTR 55.0%
TGTAGACACGTGGTGACCGT+AGG + chr8_1:1997868-1997887 None:intergenic 55.0%
CTTAGACGGTCGTGCATGCT+AGG - chr8_1:1997931-1997950 Msa1172120:five_prime_UTR 55.0%
TATACGTGTCATGGCGGTCG+AGG - chr8_1:1997997-1998016 Msa1172120:five_prime_UTR 55.0%
AGTGACGTGCGGGTTCCTTA+CGG - chr8_1:1998443-1998462 Msa1172120:five_prime_UTR 55.0%
!! GTGAAACGGGGTTAGCCGTA+AGG + chr8_1:1998461-1998480 None:intergenic 55.0%
! CCACACTAGGTTGGCTCAAG+GGG + chr8_1:1998494-1998513 None:intergenic 55.0%
! GTCCACACTAGGTTGGCTCA+AGG + chr8_1:1998496-1998515 None:intergenic 55.0%
AAAGCTTCGGAATGCACCGC+CGG - chr8_1:1999045-1999064 Msa1172120:five_prime_UTR 55.0%
TTACCAGCCAATCGTGCCAC+AGG + chr8_1:1999846-1999865 None:intergenic 55.0%
CGGGCAAATGCGACACGTTA+TGG - chr8_1:2000213-2000232 Msa1172120:intron 55.0%
CAGTGCCCGCATCAAAGTGT+TGG + chr8_1:2000277-2000296 None:intergenic 55.0%
CACTGAGAGCTGGAACAGTG+TGG - chr8_1:2000292-2000311 Msa1172120:five_prime_UTR 55.0%
! AGTGGGATTGGCAGGGAGAA+AGG - chr8_1:2000369-2000388 Msa1172120:five_prime_UTR 55.0%
CCCCACTAAACAATCCTGCG+TGG - chr8_1:2000436-2000455 Msa1172120:five_prime_UTR 55.0%
ATCATGTGAGGACCAGGGCC+TGG + chr8_1:1988003-1988022 None:intergenic 60.0%
AGGTAGCTCACACGCTAGCG+GGG + chr8_1:1988868-1988887 None:intergenic 60.0%
GAGGTAGCTCACACGCTAGC+GGG + chr8_1:1988869-1988888 None:intergenic 60.0%
! GCAGCAGTGCGTGCTGATCA+TGG + chr8_1:1989283-1989302 None:intergenic 60.0%
CTACGCGTGGCTGCACTCTA+CGG - chr8_1:1989302-1989321 Msa1172120:intron 60.0%
TGGCAGAAGCTAACGGCAGC+AGG + chr8_1:1989378-1989397 None:intergenic 60.0%
GTGCAGGTGTGGATTCGAGC+TGG + chr8_1:1989688-1989707 None:intergenic 60.0%
GTTCCTTTGCGGTGCAGGTG+TGG + chr8_1:1989699-1989718 None:intergenic 60.0%
!! GCTTTTTGGTGGGGTCACGG+TGG + chr8_1:1990519-1990538 None:intergenic 60.0%
! GACTTGCGCCTGGTTCTCAG+TGG - chr8_1:1990914-1990933 Msa1172120:intron 60.0%
GTAGGGCGCGCAAGAAGTTG+GGG - chr8_1:1992146-1992165 Msa1172120:intron 60.0%
TAGGGCGCGCAAGAAGTTGG+GGG - chr8_1:1992147-1992166 Msa1172120:intron 60.0%
TCTCCAATTGCTGGACGGCG+CGG + chr8_1:1992394-1992413 None:intergenic 60.0%
TAGCACCGCTGCAGCTGTTG+AGG - chr8_1:1994706-1994725 Msa1172120:three_prime_UTR 60.0%
CGCGAGCTGCTGATACTGCA+CGG + chr8_1:1995218-1995237 None:intergenic 60.0%
TGCAGTATCAGCAGCTCGCG+AGG - chr8_1:1995218-1995237 Msa1172120:three_prime_UTR 60.0%
CAGAACACCTGGGGGTAGAC+CGG + chr8_1:1996085-1996104 None:intergenic 60.0%
! GCAAGAGGTGCACCAGCAGT+TGG + chr8_1:1996129-1996148 None:intergenic 60.0%
CAGGGGCAATGTTGCTGTGC+TGG - chr8_1:1996780-1996799 Msa1172120:five_prime_UTR 60.0%
GGGTGTAGAGCAAGGTCCTC+AGG - chr8_1:1996899-1996918 Msa1172120:five_prime_UTR 60.0%
GTACCCGCTGCAGGATGACA+GGG + chr8_1:1997703-1997722 None:intergenic 60.0%
TGTTCGTTCGTACCCGCTGC+AGG + chr8_1:1997712-1997731 None:intergenic 60.0%
GTGACCGTAGGTTTCCCCTG+AGG + chr8_1:1997856-1997875 None:intergenic 60.0%
! ATTTTACGGAGAGCCCGGGG+TGG - chr8_1:1998351-1998370 Msa1172120:five_prime_UTR 60.0%
TGCTCGGGTTTACTCCACCC+CGG + chr8_1:1998368-1998387 None:intergenic 60.0%
CCCCTTGAGCCAACCTAGTG+TGG - chr8_1:1998491-1998510 Msa1172120:five_prime_UTR 60.0%
ATGCACCGCCGGCCCTAAAA+TGG - chr8_1:1999056-1999075 Msa1172120:five_prime_UTR 60.0%
TGCACCGCCGGCCCTAAAAT+GGG - chr8_1:1999057-1999076 Msa1172120:five_prime_UTR 60.0%
!!! TTGGCCCATTTTAGGGCCGG+CGG + chr8_1:1999064-1999083 None:intergenic 60.0%
CCTGCGCTATTAGCGCACCT+GGG - chr8_1:1999115-1999134 Msa1172120:five_prime_UTR 60.0%
CTGCGCTATTAGCGCACCTG+GGG - chr8_1:1999116-1999135 Msa1172120:five_prime_UTR 60.0%
AGCGTGGTTCTTCGGGTCTG+TGG - chr8_1:1999185-1999204 Msa1172120:five_prime_UTR 60.0%
! GAGGGCGCATGGTAGAGAGA+AGG - chr8_1:1999630-1999649 Msa1172120:five_prime_UTR 60.0%
GGCGCATGGTAGAGAGAAGG+AGG - chr8_1:1999633-1999652 Msa1172120:five_prime_UTR 60.0%
GTGCCACAGGACGAAGCTGA+TGG + chr8_1:1999833-1999852 None:intergenic 60.0%
GCTTCGTCCTGTGGCACGAT+TGG - chr8_1:1999836-1999855 Msa1172120:five_prime_UTR 60.0%
!! TTGATGCGGGCACTGAGAGC+TGG - chr8_1:2000282-2000301 Msa1172120:five_prime_UTR 60.0%
GGTAGCTCACACGCTAGCGG+GGG + chr8_1:1988867-1988886 None:intergenic 65.0%
CGTGTCGGAAACAGTGGCGC+AGG + chr8_1:1989509-1989528 None:intergenic 65.0%
TTGGTCCCATCATCCCGGGG+CGG + chr8_1:1991118-1991137 None:intergenic 65.0%
AGGGCGCGCAAGAAGTTGGG+GGG - chr8_1:1992148-1992167 Msa1172120:intron 65.0%
AGTCCGCGCCGTCCAGCAAT+TGG - chr8_1:1992388-1992407 Msa1172120:intron 65.0%
CGTACCCGCTGCAGGATGAC+AGG + chr8_1:1997704-1997723 None:intergenic 65.0%
GCTCGGGTTTACTCCACCCC+GGG + chr8_1:1998367-1998386 None:intergenic 65.0%
!! CGTCACTGCAGGAGTGCCGT+TGG + chr8_1:1998430-1998449 None:intergenic 65.0%
GGCACTCCTGCAGTGACGTG+CGG - chr8_1:1998432-1998451 Msa1172120:five_prime_UTR 65.0%
GCACTCCTGCAGTGACGTGC+GGG - chr8_1:1998433-1998452 Msa1172120:five_prime_UTR 65.0%
AGGAACCCGCACGTCACTGC+AGG + chr8_1:1998441-1998460 None:intergenic 65.0%
GCCTGCGCTATTAGCGCACC+TGG - chr8_1:1999114-1999133 Msa1172120:five_prime_UTR 65.0%
CCCAGGTGCGCTAATAGCGC+AGG + chr8_1:1999118-1999137 None:intergenic 65.0%
CTATTAGCGCACCTGGGGCG+TGG - chr8_1:1999121-1999140 Msa1172120:five_prime_UTR 65.0%
! AAAGGAGAGGGGAGGGCGCA+TGG - chr8_1:1999619-1999638 Msa1172120:five_prime_UTR 65.0%
CGTCCTGTGGCACGATTGGC+TGG - chr8_1:1999840-1999859 Msa1172120:five_prime_UTR 65.0%
GTGAGGACCAGGGCCTGGCA+TGG + chr8_1:1987998-1988017 None:intergenic 70.0%
GCACGCACTGCTGCTACGCG+TGG - chr8_1:1989289-1989308 Msa1172120:intron 70.0%
AGTGCCACGAAGGTCGCCCC+TGG - chr8_1:1991007-1991026 Msa1172120:intron 70.0%
GAAGCCAGGGGCGACCTTCG+TGG + chr8_1:1991014-1991033 None:intergenic 70.0%
AACCCCCGCCCCGGGATGAT+GGG - chr8_1:1991110-1991129 Msa1172120:intron 70.0%
TGGTCCCATCATCCCGGGGC+GGG + chr8_1:1991117-1991136 None:intergenic 70.0%
GGGCTGACAGTCCCGGCTGA+TGG - chr8_1:1995648-1995667 Msa1172120:three_prime_UTR 70.0%
GGGGCGGGGGTTGCGTCAAG+GGG + chr8_1:1991102-1991121 None:intergenic 75.0%
CGGGGCGGGGGTTGCGTCAA+GGG + chr8_1:1991103-1991122 None:intergenic 75.0%
CCTTGACGCAACCCCCGCCC+CGG - chr8_1:1991101-1991120 Msa1172120:intron 75.0%
CTTGACGCAACCCCCGCCCC+GGG - chr8_1:1991102-1991121 Msa1172120:intron 75.0%
CAACCCCCGCCCCGGGATGA+TGG - chr8_1:1991109-1991128 Msa1172120:intron 75.0%
GTCCCATCATCCCGGGGCGG+GGG + chr8_1:1991115-1991134 None:intergenic 75.0%
GGTCCCATCATCCCGGGGCG+GGG + chr8_1:1991116-1991135 None:intergenic 75.0%
CTTCAGGCAGGCCACGCCCC+AGG + chr8_1:1999135-1999154 None:intergenic 75.0%
! CCGGGGCGGGGGTTGCGTCA+AGG + chr8_1:1991104-1991123 None:intergenic 80.0%
! GGGCAGGCCGGTCTACCCCC+AGG - chr8_1:1996075-1996094 Msa1172120:CDS 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 1987828 2000738 1987828 ID=Msa1172120;Name=Msa1172120
chr8_1 mRNA 1987828 2000738 1987828 ID=Msa1172120-mRNA-1;Parent=Msa1172120;Name=Msa1172120-mRNA-1;_AED=0.04;_eAED=0.04;_QI=3966|1|1|1|0.92|0.78|14|3853|123
chr8_1 exon 1987828 1988375 1987828 ID=Msa1172120-mRNA-1:exon:796;Parent=Msa1172120-mRNA-1
chr8_1 exon 1991140 1991201 1991140 ID=Msa1172120-mRNA-1:exon:795;Parent=Msa1172120-mRNA-1
chr8_1 exon 1991300 1991437 1991300 ID=Msa1172120-mRNA-1:exon:794;Parent=Msa1172120-mRNA-1
chr8_1 exon 1991646 1991783 1991646 ID=Msa1172120-mRNA-1:exon:793;Parent=Msa1172120-mRNA-1
chr8_1 exon 1991870 1992043 1991870 ID=Msa1172120-mRNA-1:exon:792;Parent=Msa1172120-mRNA-1
chr8_1 exon 1992396 1992485 1992396 ID=Msa1172120-mRNA-1:exon:791;Parent=Msa1172120-mRNA-1
chr8_1 exon 1992709 1992938 1992709 ID=Msa1172120-mRNA-1:exon:790;Parent=Msa1172120-mRNA-1
chr8_1 exon 1993042 1993195 1993042 ID=Msa1172120-mRNA-1:exon:789;Parent=Msa1172120-mRNA-1
chr8_1 exon 1993288 1993430 1993288 ID=Msa1172120-mRNA-1:exon:788;Parent=Msa1172120-mRNA-1
chr8_1 exon 1993763 1993897 1993763 ID=Msa1172120-mRNA-1:exon:787;Parent=Msa1172120-mRNA-1
chr8_1 exon 1993997 1996287 1993997 ID=Msa1172120-mRNA-1:exon:786;Parent=Msa1172120-mRNA-1
chr8_1 exon 1996548 2000092 1996548 ID=Msa1172120-mRNA-1:exon:785;Parent=Msa1172120-mRNA-1
chr8_1 exon 2000113 2000171 2000113 ID=Msa1172120-mRNA-1:exon:784;Parent=Msa1172120-mRNA-1
chr8_1 exon 2000255 2000738 2000255 ID=Msa1172120-mRNA-1:exon:783;Parent=Msa1172120-mRNA-1
chr8_1 five_prime_UTR 2000255 2000738 2000255 ID=Msa1172120-mRNA-1:five_prime_utr;Parent=Msa1172120-mRNA-1
chr8_1 five_prime_UTR 2000113 2000171 2000113 ID=Msa1172120-mRNA-1:five_prime_utr;Parent=Msa1172120-mRNA-1
chr8_1 five_prime_UTR 1996670 2000092 1996670 ID=Msa1172120-mRNA-1:five_prime_utr;Parent=Msa1172120-mRNA-1
chr8_1 CDS 1996548 1996669 1996548 ID=Msa1172120-mRNA-1:cds;Parent=Msa1172120-mRNA-1
chr8_1 CDS 1996038 1996287 1996038 ID=Msa1172120-mRNA-1:cds;Parent=Msa1172120-mRNA-1
chr8_1 three_prime_UTR 1993997 1996037 1993997 ID=Msa1172120-mRNA-1:three_prime_utr;Parent=Msa1172120-mRNA-1
chr8_1 three_prime_UTR 1993763 1993897 1993763 ID=Msa1172120-mRNA-1:three_prime_utr;Parent=Msa1172120-mRNA-1
chr8_1 three_prime_UTR 1993288 1993430 1993288 ID=Msa1172120-mRNA-1:three_prime_utr;Parent=Msa1172120-mRNA-1
chr8_1 three_prime_UTR 1993042 1993195 1993042 ID=Msa1172120-mRNA-1:three_prime_utr;Parent=Msa1172120-mRNA-1
chr8_1 three_prime_UTR 1992709 1992938 1992709 ID=Msa1172120-mRNA-1:three_prime_utr;Parent=Msa1172120-mRNA-1
chr8_1 three_prime_UTR 1992396 1992485 1992396 ID=Msa1172120-mRNA-1:three_prime_utr;Parent=Msa1172120-mRNA-1
chr8_1 three_prime_UTR 1991870 1992043 1991870 ID=Msa1172120-mRNA-1:three_prime_utr;Parent=Msa1172120-mRNA-1
chr8_1 three_prime_UTR 1991646 1991783 1991646 ID=Msa1172120-mRNA-1:three_prime_utr;Parent=Msa1172120-mRNA-1
chr8_1 three_prime_UTR 1991300 1991437 1991300 ID=Msa1172120-mRNA-1:three_prime_utr;Parent=Msa1172120-mRNA-1
chr8_1 three_prime_UTR 1991140 1991201 1991140 ID=Msa1172120-mRNA-1:three_prime_utr;Parent=Msa1172120-mRNA-1
chr8_1 three_prime_UTR 1987828 1988375 1987828 ID=Msa1172120-mRNA-1:three_prime_utr;Parent=Msa1172120-mRNA-1
Gene Sequence

>Msa1172120

ATGTACACTTGGATTTTGAGCACTGGTTGGTGGCAAGGAAGAGCACCAGTTAACCCAGATGCTGTTGTTGTAGTTGGCTGCTTGTGTGTTTGCTTAATTGGTGGATTCTTTTACCTCAACAGGGCAAGTTCTTCAGACTCAATAAAGAAAAAATCATATCAGTCAATGCTACTTATGGTATCCATAGCTTCTTTATACTGCTTGTGGTGTGCAATTCAGATATACGTGATCAGTCCGCGCCGTCCAGCAATTGGAGAAGAGGCTGATCTTGGCGTTATCATTTTTTTGGCTTTCTATTTCTTTCTACCTTATGGTTTGTGTATAACGTCCATGCACCCAAAAGATCTTGATTCTAATCAAATTCCACGTTAA
Protein sequence

>Msa1172120

MYTWILSTGWWQGRAPVNPDAVVVVGCLCVCLIGGFFYLNRASSSDSIKKKSYQSMLLMVSIASLYCLWCAIQIYVISPRRPAIGEEADLGVIIFLAFYFFLPYGLCITSMHPKDLDSNQIPR*