AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0240460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0240460 MtrunA17_Chr2g0291481 97.297 740 20 0 1 740 1 740 0.0 1467
Msa0240460 MtrunA17_Chr1g0202741 31.755 718 448 15 39 739 9 701 1.15e-108 346
Msa0240460 MtrunA17_Chr1g0202731 31.154 719 451 17 39 739 14 706 1.66e-105 338
Msa0240460 MtrunA17_Chr8g0348521 32.421 731 423 20 39 738 9 699 1.76e-101 327
Msa0240460 MtrunA17_Chr8g0348531 33.431 685 410 17 73 738 57 714 1.95e-101 327
Msa0240460 MtrunA17_Chr4g0058571 30.806 633 402 13 128 740 114 730 2.74e-82 276
Msa0240460 MtrunA17_Chr8g0349071 36.478 318 178 6 257 568 1 300 1.27e-52 184
Msa0240460 MtrunA17_Chr2g0301511 30.455 220 128 6 286 483 541 757 2.61e-22 102
Msa0240460 MtrunA17_Chr7g0272591 27.477 222 126 7 293 486 524 738 5.52e-21 98.6
Msa0240460 MtrunA17_Chr4g0061441 25.651 269 168 8 289 533 475 735 5.83e-21 98.2
Msa0240460 MtrunA17_Chr1g0192121 26.749 243 148 6 293 509 511 749 6.17e-21 98.2
Msa0240460 MtrunA17_Chr8g0387591 28.829 222 126 6 286 482 552 766 1.11e-20 97.4
Msa0240460 MtrunA17_Chr3g0131401 26.697 221 124 5 293 483 541 753 3.35e-20 95.9
Msa0240460 MtrunA17_Chr8g0385411 26.977 215 131 5 293 483 520 732 7.83e-20 94.7
Msa0240460 MtrunA17_Chr3g0131381 27.511 229 127 6 286 483 527 747 1.19e-19 94.4
Msa0240460 MtrunA17_Chr3g0131361 26.457 223 127 7 293 483 522 739 1.03e-17 88.2
Msa0240460 MtrunA17_Chr7g0238371 24.898 245 148 6 293 504 469 710 3.83e-17 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0240460 AT5G49740.1 58.275 719 283 6 36 740 32 747 0.0 867
Msa0240460 AT5G49730.1 57.858 719 284 7 36 740 25 738 0.0 860
Msa0240460 AT5G49740.3 57.015 670 271 6 36 691 32 698 0.0 781
Msa0240460 AT5G49740.2 61.057 511 193 3 36 540 32 542 0.0 651
Msa0240460 AT5G49730.2 60.665 511 193 4 36 540 25 533 0.0 648
Msa0240460 AT1G01580.1 33.714 700 410 17 67 739 52 724 7.45e-117 369
Msa0240460 AT1G01580.2 33.714 700 410 17 67 739 130 802 7.70e-116 368
Msa0240460 AT1G01590.1 33.237 689 408 17 48 715 28 685 2.75e-110 351
Msa0240460 AT5G23980.1 31.319 728 436 17 39 739 8 698 5.68e-108 344
Msa0240460 AT5G23990.2 31.818 726 435 18 39 739 8 698 1.29e-107 343
Msa0240460 AT1G23020.7 31.811 679 417 16 48 715 28 671 8.80e-102 328
Msa0240460 AT1G23020.4 31.818 682 416 17 48 715 28 674 1.18e-100 325
Msa0240460 AT1G23020.3 31.818 682 416 17 48 715 28 674 1.18e-100 325
Msa0240460 AT1G23020.1 31.818 682 416 17 48 715 51 697 1.78e-100 325
Msa0240460 AT1G23020.5 31.818 682 416 17 48 715 51 697 1.78e-100 325
Msa0240460 AT1G23020.6 31.625 683 417 17 48 715 28 675 6.09e-100 323
Msa0240460 AT1G23020.2 31.625 683 417 17 48 715 51 698 1.27e-99 323
Msa0240460 AT5G23990.3 33.618 586 341 14 170 739 13 566 2.77e-96 310
Msa0240460 AT5G23990.1 33.564 578 344 13 178 739 103 656 8.90e-95 308
Msa0240460 AT5G50160.1 30.170 706 428 16 76 740 47 728 1.42e-85 286
Msa0240460 AT5G50160.2 31.802 566 334 12 210 740 1 549 9.40e-77 258
Msa0240460 AT1G19230.1 30.631 222 128 5 286 484 536 754 1.36e-25 113
Msa0240460 AT1G19230.2 30.631 222 128 5 286 484 562 780 1.53e-25 113
Msa0240460 AT5G07390.2 28.384 229 130 7 284 483 479 702 5.80e-22 102
Msa0240460 AT5G07390.1 28.384 229 130 7 284 483 511 734 6.64e-22 102
Msa0240460 AT4G25090.1 29.412 221 130 7 284 483 473 688 6.68e-22 101
Msa0240460 AT4G25090.2 27.336 289 164 11 284 533 461 742 7.18e-22 101
Msa0240460 AT1G64060.1 29.817 218 129 6 286 482 558 772 2.14e-21 100
Msa0240460 AT1G09090.2 26.818 220 134 6 289 484 473 689 8.60e-21 98.2
Msa0240460 AT5G47910.1 28.761 226 128 6 293 493 554 771 1.75e-20 97.4
Msa0240460 AT5G51060.1 24.620 329 183 12 265 533 487 810 2.83e-19 93.6
Msa0240460 AT5G60010.1 27.826 230 129 7 293 487 494 721 1.16e-18 91.7
Msa0240460 AT4G11230.1 30.588 170 106 4 323 482 592 759 2.95e-18 90.1
Msa0240460 AT3G45810.1 26.271 236 139 6 285 487 497 730 1.78e-16 84.3
Msa0240460 AT1G09090.1 29.577 142 85 4 289 418 473 611 3.09e-14 77.0

Find 212 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGCACATGTTGGAAATTT+TGG 0.012603 2_2:-15427701 Msa0240460:CDS
AATAATATGTGCTTATAATT+TGG 0.131596 2_2:+15424157 None:intergenic
TTTATCAACCTTGATGTTAT+TGG 0.134284 2_2:+15425560 None:intergenic
TTTCCATAATCTTCATTATA+TGG 0.178699 2_2:-15429423 Msa0240460:CDS
TTTCCTATGCCTAGTGATTA+TGG 0.198831 2_2:-15425831 Msa0240460:CDS
TCACATTGCTGTTCTCATTA+AGG 0.202451 2_2:-15426781 Msa0240460:CDS
GAAGACTCACTTCTTGAATT+AGG 0.211364 2_2:+15427479 None:intergenic
CATAATCTTTATTGTGTTCA+TGG 0.219086 2_2:-15427164 Msa0240460:CDS
ATTGCATACCTAATTATTTC+TGG 0.228186 2_2:-15429014 Msa0240460:CDS
ATCCAGTTGGATTGGTTATA+TGG 0.235123 2_2:-15425698 Msa0240460:CDS
CAAACAATTAAAATATTTCT+TGG 0.237519 2_2:+15426346 None:intergenic
TTGGTACAGGAAACAATTTC+TGG 0.238946 2_2:-15425794 Msa0240460:CDS
CAATAAAGATTATGTATAAT+TGG 0.241871 2_2:+15427173 None:intergenic
GCTGTTCTCATTAAGGTTCT+TGG 0.262512 2_2:-15426774 Msa0240460:CDS
ATGTGGGTGACCTCGCTTCC+TGG 0.264483 2_2:-15427235 Msa0240460:CDS
TTGTTGTGTCAGCTACTAAA+TGG 0.270670 2_2:-15429462 Msa0240460:CDS
CAGTCCATTGTAAGATAAAA+AGG 0.273035 2_2:-15424331 Msa0240460:three_prime_UTR
GTAGCTGACACAACAAAATT+AGG 0.287451 2_2:+15429469 None:intergenic
AGCCCATATAATGAAGATTA+TGG 0.296364 2_2:+15429420 None:intergenic
GTGGTATAGTGGTTGGATTT+TGG 0.304110 2_2:-15425620 Msa0240460:CDS
TGAGTTATTTCTTGTAACTA+TGG 0.312971 2_2:-15429569 Msa0240460:exon
GGACTCCGTTCGGGCGGGAT+TGG 0.318769 2_2:-15427679 Msa0240460:CDS
TTCAGCAGTGGAACTTCCTT+TGG 0.321244 2_2:-15429337 Msa0240460:CDS
GATCCTCCCCAGAAATAATT+AGG 0.323576 2_2:+15429006 None:intergenic
ATCCTTAAAAGGACTCTATA+AGG 0.325913 2_2:-15424301 Msa0240460:three_prime_UTR
ATCCTTATCAATGGACCATT+TGG 0.329104 2_2:-15428644 Msa0240460:CDS
TTCCATAATCTTCATTATAT+GGG 0.341924 2_2:-15429422 Msa0240460:CDS
GTTTCTTCTAGCCCTTTAGA+TGG 0.344014 2_2:-15426810 Msa0240460:CDS
GTTGATAAAATTGAGCAAAA+TGG 0.345926 2_2:-15425546 Msa0240460:CDS
TGAATCCATGTCAGAGAAAT+GGG 0.346682 2_2:-15424686 Msa0240460:CDS
TGGAACCCATGATAATATTA+AGG 0.348435 2_2:+15429684 None:intergenic
AAACAAGTTTATAAGGGTTA+TGG 0.350301 2_2:+15424200 None:intergenic
CTTGTAGTCTGCATGGTTGC+AGG 0.353731 2_2:-15425657 Msa0240460:CDS
TCCTTATCAATGGACCATTT+GGG 0.354970 2_2:-15428643 Msa0240460:CDS
TCCTTGTGGCACTGTGGAAA+TGG 0.355192 2_2:-15427017 Msa0240460:CDS
TACCGCCTGCCACTAATATA+AGG 0.356412 2_2:+15426440 None:intergenic
CATTTACTGTCCTTCTTGAT+TGG 0.357857 2_2:+15427059 None:intergenic
TTGAATCCATGTCAGAGAAA+TGG 0.358458 2_2:-15424687 Msa0240460:CDS
TGCATGGATTGTTCACAAAA+TGG 0.360348 2_2:-15429366 Msa0240460:CDS
GGCTCTAGGCCAGACTTTAA+AGG 0.367135 2_2:-15425462 Msa0240460:intron
TTATTAGAATGGAAAGATAT+TGG 0.372165 2_2:-15427304 Msa0240460:CDS
CTATATGTTCCCTTCGTTGA+AGG 0.376889 2_2:-15424075 Msa0240460:three_prime_UTR
CCCCTTTGCAGTTATTAGAA+TGG 0.380554 2_2:-15427315 Msa0240460:intron
CTATGTTATTGAGTGGCTAA+TGG 0.381925 2_2:-15427509 Msa0240460:CDS
AAGGTACTATAATCCTTAAA+AGG 0.385912 2_2:-15424312 Msa0240460:three_prime_UTR
CAAAGCTATGACTGTGGAAA+TGG 0.386950 2_2:+15424554 None:intergenic
TTTCTACCTTAATATTATCA+TGG 0.389786 2_2:-15429690 Msa0240460:five_prime_UTR
TCATTAAGGTTCTTGGCAAA+TGG 0.391972 2_2:-15426767 Msa0240460:CDS
CTTGAAGGAAAATGAAGCTT+AGG 0.393980 2_2:+15426871 None:intergenic
ATATTAGTGGCAGGCGGTAT+TGG 0.396276 2_2:-15426436 Msa0240460:CDS
GCCACTTACATCAAGTGATA+TGG 0.399229 2_2:+15426633 None:intergenic
GCTGATAACTCCTGCTAGAT+TGG 0.399708 2_2:+15427276 None:intergenic
CAAGTGTTGCACAAGAAATC+AGG 0.401849 2_2:-15424615 Msa0240460:CDS
CAGCTACTAAATGGACTCTT+AGG 0.404900 2_2:-15429453 Msa0240460:CDS
TTGCATACCTAATTATTTCT+GGG 0.411386 2_2:-15429013 Msa0240460:CDS
GTCTTCCATCTTTCCATCAT+AGG 0.420077 2_2:+15424516 None:intergenic
CTATATAAATCCAGTTGGAT+TGG 0.422614 2_2:-15425706 Msa0240460:CDS
AGTCCTTTGCTTTCTAAGAA+AGG 0.424385 2_2:-15429526 Msa0240460:CDS
TATGTCATTTCATCTACCTT+AGG 0.424790 2_2:-15425762 Msa0240460:CDS
CACCATATAACCAATCCAAC+TGG 0.430042 2_2:+15425696 None:intergenic
AGGTTCTTGGCAAATGGACC+GGG 0.430067 2_2:-15426761 Msa0240460:CDS
TAATGATAATATTCACATAA+AGG 0.431733 2_2:+15424250 None:intergenic
AGAAATGCAATTGCAAGAAC+AGG 0.433105 2_2:+15429041 None:intergenic
AAGGTTCTTGGCAAATGGAC+CGG 0.434194 2_2:-15426762 Msa0240460:CDS
AAAGTCCATAGGCGAAATCT+TGG 0.434354 2_2:+15428671 None:intergenic
CTCTAGCTTCCTTCCTATGA+TGG 0.436112 2_2:-15424529 Msa0240460:exon
GTACGAAAACCTTATATTAG+TGG 0.439883 2_2:-15426449 Msa0240460:CDS
GAAAATATACCTTTAAAGTC+TGG 0.441652 2_2:+15425453 None:intergenic
TTTCTATGCTTATACTATGC+AGG 0.442358 2_2:-15428561 Msa0240460:CDS
TGATTATGGAATGTCTGGTT+TGG 0.443470 2_2:-15425817 Msa0240460:CDS
GCTTCGGTTGAGGGGCCATA+TGG 0.449802 2_2:-15426666 Msa0240460:CDS
CCTAGTGATTATGGAATGTC+TGG 0.452709 2_2:-15425822 Msa0240460:CDS
CCCCAAATGGTCCATTGATA+AGG 0.454422 2_2:+15428642 None:intergenic
AAATTCCACGTTCGCACTCC+AGG 0.454972 2_2:+15427217 None:intergenic
ATGCTGCAAAATATCATGTA+TGG 0.457558 2_2:-15427576 Msa0240460:CDS
GTGGTAACAGCTTCGGTTGA+GGG 0.460759 2_2:-15426675 Msa0240460:CDS
AGAACAGATCCCCTTGAAAT+CGG 0.461594 2_2:+15427628 None:intergenic
TTGTAGCTGGTTTGTTGATG+TGG 0.462418 2_2:-15427252 Msa0240460:CDS
GTTTCTGCAACAGAGCTCAT+TGG 0.463709 2_2:-15428617 Msa0240460:CDS
ATCTTCGGTGGTATAGTGGT+TGG 0.467954 2_2:-15425627 Msa0240460:CDS
TAGGCGAAATCTTGGATACT+TGG 0.468997 2_2:+15428679 None:intergenic
ACAGGAAACAATTTCTGGTC+TGG 0.469821 2_2:-15425789 Msa0240460:CDS
TTCTACCTTAATATTATCAT+GGG 0.470108 2_2:-15429689 Msa0240460:five_prime_UTR
AAGTTAACTACCATACAGTA+TGG 0.471321 2_2:-15425483 Msa0240460:CDS
TTCTCCATCGTGTGAGGGAT+GGG 0.474532 2_2:-15426381 Msa0240460:CDS
ACGATAATTCCCGAACTTGA+AGG 0.476050 2_2:+15426856 None:intergenic
AGTATCCAAGATTTCGCCTA+TGG 0.476533 2_2:-15428676 Msa0240460:CDS
CACATTAAATTTCATTTCAG+TGG 0.478013 2_2:-15429748 Msa0240460:five_prime_UTR
GTTGCAGGTGTAGTTATCTT+CGG 0.483407 2_2:-15425642 Msa0240460:CDS
TGTAGCTGGTTTGTTGATGT+GGG 0.488112 2_2:-15427251 Msa0240460:CDS
CGGGATTGGATTAATGTGCT+TGG 0.488988 2_2:-15427665 Msa0240460:CDS
AATATTAAGGTAGAAATATG+AGG 0.489639 2_2:+15429697 None:intergenic
AAATGGAAGATGGGGTGATA+AGG 0.493095 2_2:+15424571 None:intergenic
CGCTTCCTGGAGTGCGAACG+TGG 0.494322 2_2:-15427222 Msa0240460:CDS
GGAACTTCCTTTGGAATCAC+AGG 0.496264 2_2:-15429328 Msa0240460:intron
GTGTTCATGGCTTTGCATAT+TGG 0.498872 2_2:-15427151 Msa0240460:CDS
TGGTTATATGGTGGTACAAA+GGG 0.499086 2_2:-15425686 Msa0240460:CDS
GGAGTTATCAGCCTTGTAGC+TGG 0.499164 2_2:-15427265 Msa0240460:CDS
TATGGAATGTCTGGTTTGGT+TGG 0.500105 2_2:-15425813 Msa0240460:CDS
GGAAAAGCAAAGTTCTCTAA+AGG 0.503179 2_2:-15425589 Msa0240460:CDS
GAAGCTGTTACCACCGTATG+AGG 0.505127 2_2:+15426684 None:intergenic
ATTGGTGTTGCCAATCTAGC+AGG 0.509235 2_2:-15427286 Msa0240460:CDS
AGTTATCTTCGGTGGTATAG+TGG 0.510123 2_2:-15425631 Msa0240460:CDS
TATGGTACTTCGTGTCCATA+TGG 0.512922 2_2:+15426651 None:intergenic
TCCTTCCTATGATGGAAAGA+TGG 0.519596 2_2:-15424521 Msa0240460:three_prime_UTR
AAGTAAGATCACAAAGCCTA+AGG 0.519858 2_2:+15425746 None:intergenic
GGTGGTAACAGCTTCGGTTG+AGG 0.520485 2_2:-15426676 Msa0240460:CDS
CACTGAAATGAAATTTAATG+TGG 0.520500 2_2:+15429749 None:intergenic
ATGTCTGGTTTGGTTGGTAC+AGG 0.521130 2_2:-15425807 Msa0240460:CDS
TTGAAGGAAAATGAAGCTTA+GGG 0.521409 2_2:+15426872 None:intergenic
GCAAAATATCATGTATGGCT+AGG 0.522260 2_2:-15427571 Msa0240460:CDS
TGAGGTTCTGCCAATCAAGA+AGG 0.523056 2_2:-15427069 Msa0240460:CDS
TATATTGTATATATAGTAGC+AGG 0.523200 2_2:-15424457 Msa0240460:three_prime_UTR
TCATACGGTGGTAACAGCTT+CGG 0.525366 2_2:-15426682 Msa0240460:CDS
TGCTGATGACTAATCTCTCT+CGG 0.525459 2_2:+15424430 None:intergenic
AATCATATTTAAGATATTGT+CGG 0.526904 2_2:-15424051 Msa0240460:three_prime_UTR
AATATGATTACCTTCAACGA+AGG 0.530107 2_2:+15424065 None:intergenic
TTTATTTATACCGATTTCAA+GGG 0.530400 2_2:-15427638 Msa0240460:CDS
ATTTACTATATAAATCCAGT+TGG 0.531760 2_2:-15425711 Msa0240460:CDS
ATTCTCCATCGTGTGAGGGA+TGG 0.535286 2_2:-15426382 Msa0240460:CDS
TGGCCTAGAGCCATACTGTA+TGG 0.535994 2_2:+15425473 None:intergenic
GTTGCAGAAACAACCCCAAA+TGG 0.541339 2_2:+15428629 None:intergenic
TTTATCTGTTCAGCCTCATA+CGG 0.542802 2_2:-15426697 Msa0240460:CDS
ACTTCTTTCGACCGTTGACA+TGG 0.543973 2_2:-15426296 Msa0240460:CDS
TCACCTTTCTTAGAAAGCAA+AGG 0.544082 2_2:+15429523 None:intergenic
GACTCTTCTATGTTATTGAG+TGG 0.545334 2_2:-15427516 Msa0240460:CDS
GCAACACTTGACTGAAGAGT+TGG 0.545843 2_2:+15424628 None:intergenic
ATGACTGTGGAAATGGAAGA+TGG 0.548444 2_2:+15424561 None:intergenic
GAAAACCTTATATTAGTGGC+AGG 0.550053 2_2:-15426445 Msa0240460:CDS
CTACCATACAGTATGGCTCT+AGG 0.555352 2_2:-15425476 Msa0240460:CDS
TGCATACCTAATTATTTCTG+GGG 0.557842 2_2:-15429012 Msa0240460:CDS
GATGTTGGTATTCTAGTTTG+TGG 0.558214 2_2:-15424655 Msa0240460:CDS
AGAAATAATTAGGTATGCAA+TGG 0.558493 2_2:+15429016 None:intergenic
ACACTTGACTGAAGAGTTGG+AGG 0.558505 2_2:+15424631 None:intergenic
TTGGTTATATGGTGGTACAA+AGG 0.558838 2_2:-15425687 Msa0240460:CDS
ATGGCCCCATTTCTCTGACA+TGG 0.558908 2_2:+15424681 None:intergenic
AATGAAATTTAATGTGGGGA+TGG 0.559532 2_2:+15429755 None:intergenic
ATGAAATTTAATGTGGGGAT+GGG 0.559541 2_2:+15429756 None:intergenic
GGGCTAGAAGAAACACTGAA+TGG 0.559675 2_2:+15426819 None:intergenic
ATACCTAATTATTTCTGGGG+AGG 0.562304 2_2:-15429009 Msa0240460:CDS
GGGAATTATCGTGGCTTCAG+TGG 0.567364 2_2:-15426845 Msa0240460:CDS
TGTTATTATCTGCAGGAAGA+GGG 0.567707 2_2:-15425888 Msa0240460:intron
CCAGACATTCCATAATCACT+AGG 0.567995 2_2:+15425822 None:intergenic
TTCAAGTTCGGGAATTATCG+TGG 0.568443 2_2:-15426854 Msa0240460:CDS
ATCTGTTCAGCCTCATACGG+TGG 0.568522 2_2:-15426694 Msa0240460:CDS
CAATAACATAGAAGAGTCCA+TGG 0.569129 2_2:+15427521 None:intergenic
AAATGGCTTAATTTCAGCAG+TGG 0.569517 2_2:-15429349 Msa0240460:CDS
TTTCCATTGGTGAATGGTGA+AGG 0.571228 2_2:+15424490 None:intergenic
TCCATCTTTCCATCATAGGA+AGG 0.572392 2_2:+15424520 None:intergenic
TTAATCCAATCCCGCCCGAA+CGG 0.573743 2_2:+15427674 None:intergenic
AAAATATTTCTTGGTCGACA+AGG 0.574465 2_2:+15426355 None:intergenic
ACATCAACAAACCAGCTACA+AGG 0.574690 2_2:+15427254 None:intergenic
ATGTCAACGGTCGAAAGAAG+TGG 0.576179 2_2:+15426298 None:intergenic
TGTACATATCTTCGTCACTC+GGG 0.579762 2_2:-15426233 Msa0240460:CDS
TAATCACTAGGCATAGGAAA+GGG 0.580384 2_2:+15425834 None:intergenic
TTATGCTTGATCGATTTCTG+AGG 0.584264 2_2:-15427087 Msa0240460:CDS
TGACTGTGGAAATGGAAGAT+GGG 0.586819 2_2:+15424562 None:intergenic
GGATAAGTCCAATAACATCA+AGG 0.590579 2_2:-15425568 Msa0240460:CDS
TGGTAACAGCTTCGGTTGAG+GGG 0.591607 2_2:-15426674 Msa0240460:CDS
CCTTATCAATGGACCATTTG+GGG 0.593226 2_2:-15428642 Msa0240460:CDS
TCGGGAATCAGATCCTCCAT+TGG 0.593505 2_2:-15426215 Msa0240460:intron
AATGGTCCATTGATAAGGAT+CGG 0.593738 2_2:+15428647 None:intergenic
CTCTATAAGGAACTCTGAGT+GGG 0.593858 2_2:-15424288 Msa0240460:three_prime_UTR
ATGTACATATCTTCGTCACT+CGG 0.595377 2_2:-15426234 Msa0240460:CDS
AAATGGCTCTGTGGATCACA+AGG 0.597424 2_2:-15425529 Msa0240460:CDS
ACAGATTGTTTCCATGTCAA+CGG 0.597655 2_2:+15426285 None:intergenic
ATTCCATAATCACTAGGCAT+AGG 0.598212 2_2:+15425828 None:intergenic
ACTGAAATGAAATTTAATGT+GGG 0.600368 2_2:+15429750 None:intergenic
CGATATTCTCCATCGTGTGA+GGG 0.600683 2_2:-15426386 Msa0240460:CDS
TCGCTCAATATAGCAAGGAA+AGG 0.600792 2_2:+15426406 None:intergenic
GTTATTGAGTGGCTAATGGA+AGG 0.601090 2_2:-15427505 Msa0240460:CDS
GCGATATTCTCCATCGTGTG+AGG 0.601408 2_2:-15426387 Msa0240460:CDS
ATAATCACTAGGCATAGGAA+AGG 0.604094 2_2:+15425833 None:intergenic
GGATGGGATAATATAGTAGA+GGG 0.606266 2_2:+15429772 None:intergenic
ATATGATTACCTTCAACGAA+GGG 0.606366 2_2:+15424066 None:intergenic
GGGATGGGATAATATAGTAG+AGG 0.606426 2_2:+15429771 None:intergenic
GGTTCTTGGCAAATGGACCG+GGG 0.607531 2_2:-15426760 Msa0240460:CDS
GCTACTACTTGTAGTCTGCA+TGG 0.612275 2_2:-15425664 Msa0240460:CDS
TCATCGAGGTGCCTTCCTTG+TGG 0.616387 2_2:-15427031 Msa0240460:CDS
AAGAAAGGTGATGAAACTGA+TGG 0.618638 2_2:-15429511 Msa0240460:CDS
CGTTCGCACTCCAGGAAGCG+AGG 0.620245 2_2:+15427225 None:intergenic
CAGTTGGATTGGTTATATGG+TGG 0.622983 2_2:-15425695 Msa0240460:CDS
GAATATCGCTCAATATAGCA+AGG 0.623134 2_2:+15426401 None:intergenic
GACTGTGGAAATGGAAGATG+GGG 0.624675 2_2:+15424563 None:intergenic
CGAAAGGGATATCTATGAAG+CGG 0.625285 2_2:+15427602 None:intergenic
TGTATTACCTGTGATTCCAA+AGG 0.625397 2_2:+15429321 None:intergenic
TTATTTATACCGATTTCAAG+GGG 0.626114 2_2:-15427637 Msa0240460:CDS
AGAGATCAAAGCTATGACTG+TGG 0.626232 2_2:+15424548 None:intergenic
TTACCATCAGAATCTGTGCA+TGG 0.626896 2_2:-15429382 Msa0240460:CDS
GCAGGTGTAGTTATCTTCGG+TGG 0.630037 2_2:-15425639 Msa0240460:CDS
ACTCTATAAGGAACTCTGAG+TGG 0.632677 2_2:-15424289 Msa0240460:three_prime_UTR
ACCATTTCCACAGTGCCACA+AGG 0.634007 2_2:+15427016 None:intergenic
AATCCATGCACAGATTCTGA+TGG 0.634212 2_2:+15429379 None:intergenic
AAAGTTAGACTAACCAATGG+AGG 0.635530 2_2:+15426202 None:intergenic
TAAGGATCGGAAAAGTCCAT+AGG 0.639419 2_2:+15428660 None:intergenic
GTTCTTGGCAAATGGACCGG+GGG 0.642988 2_2:-15426759 Msa0240460:CDS
TTTCCACAGTGCCACAAGGA+AGG 0.647154 2_2:+15427020 None:intergenic
AGTTATCATTTAGAGCCAAG+AGG 0.648631 2_2:-15428517 Msa0240460:intron
ATACCTTCACCATTCACCAA+TGG 0.648646 2_2:-15424493 Msa0240460:three_prime_UTR
TTTACTTTATCAGAAAAGCG+TGG 0.652331 2_2:+15426262 None:intergenic
AAATGGGGCCATGTTGATGT+TGG 0.654368 2_2:-15424670 Msa0240460:CDS
TTAAGAGAAAGAATCACTGA+AGG 0.655743 2_2:-15426735 Msa0240460:CDS
GTGCCTTCCTTGTGGCACTG+TGG 0.660437 2_2:-15427023 Msa0240460:CDS
AATTGAGCAAAATGGCTCTG+TGG 0.663882 2_2:-15425538 Msa0240460:CDS
GAATCCATGTCAGAGAAATG+GGG 0.666449 2_2:-15424685 Msa0240460:CDS
GTTTCCCATCCCTCACACGA+TGG 0.667021 2_2:+15426377 None:intergenic
CTAGAATACCAACATCAACA+TGG 0.673063 2_2:+15424662 None:intergenic
AACCTTATATTAGTGGCAGG+CGG 0.680461 2_2:-15426442 Msa0240460:CDS
TTCTTGGCAAATGGACCGGG+GGG 0.692411 2_2:-15426758 Msa0240460:CDS
CTGAAATGAAATTTAATGTG+GGG 0.708329 2_2:+15429751 None:intergenic
ATGGCTAGGACACCTCACAA+TGG 0.732994 2_2:-15427557 Msa0240460:CDS
CAGTAAATGTAATCTCATCG+AGG 0.756992 2_2:-15427045 Msa0240460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCTTTTATTAGTTTATTT+GGG + chr2_2:15425459-15425478 None:intergenic 10.0%
!!! AAGAAATATTTTAATTGTTT+GGG - chr2_2:15427465-15427484 Msa0240460:intron 10.0%
!!! AAAAAATGTCATATTTTTAT+CGG - chr2_2:15428747-15428766 Msa0240460:intron 10.0%
!!! AATTTCTGAAAATAAAGAAA+TGG + chr2_2:15425333-15425352 None:intergenic 15.0%
!!! GTTTCTTTTATTAGTTTATT+TGG + chr2_2:15425460-15425479 None:intergenic 15.0%
!!! CTTTTTAATTTTTCAGTTTA+TGG + chr2_2:15425625-15425644 None:intergenic 15.0%
!! TCTTTAATAAAAACAAACTA+GGG + chr2_2:15425765-15425784 None:intergenic 15.0%
!! AAAGTTAAAACTCTTAAAAT+GGG + chr2_2:15425880-15425899 None:intergenic 15.0%
!! AAAAGTTAAAACTCTTAAAA+TGG + chr2_2:15425881-15425900 None:intergenic 15.0%
!! ATTATGTAAAGATAAGTAAA+TGG + chr2_2:15426468-15426487 None:intergenic 15.0%
!! TTACTTATCTTTACATAATT+TGG - chr2_2:15426469-15426488 Msa0240460:intron 15.0%
!! CAATAAAGATTATGTATAAT+TGG + chr2_2:15426639-15426658 None:intergenic 15.0%
!! CAAACAATTAAAATATTTCT+TGG + chr2_2:15427466-15427485 None:intergenic 15.0%
!!! CAAGAAATATTTTAATTGTT+TGG - chr2_2:15427464-15427483 Msa0240460:intron 15.0%
!! TAATGATAATATTCACATAA+AGG + chr2_2:15429562-15429581 None:intergenic 15.0%
!! AAAGAAAAACAAGTTTATAA+GGG + chr2_2:15429618-15429637 None:intergenic 15.0%
!! TAAAGAAAAACAAGTTTATA+AGG + chr2_2:15429619-15429638 None:intergenic 15.0%
!! AATAATATGTGCTTATAATT+TGG + chr2_2:15429655-15429674 None:intergenic 15.0%
!!! AATCATATTTAAGATATTGT+CGG - chr2_2:15429758-15429777 Msa0240460:five_prime_UTR 15.0%
!! ACTGAAATGAAATTTAATGT+GGG + chr2_2:15424062-15424081 None:intergenic 20.0%
!! AATATTAAGGTAGAAATATG+AGG + chr2_2:15424115-15424134 None:intergenic 20.0%
!! TTTCTACCTTAATATTATCA+TGG - chr2_2:15424119-15424138 Msa0240460:three_prime_UTR 20.0%
!! TTCTACCTTAATATTATCAT+GGG - chr2_2:15424120-15424139 Msa0240460:three_prime_UTR 20.0%
!! AACACATAAAAATAGTAAGT+GGG + chr2_2:15424175-15424194 None:intergenic 20.0%
!! AAACACATAAAAATAGTAAG+TGG + chr2_2:15424176-15424195 None:intergenic 20.0%
!! TTTCCATAATCTTCATTATA+TGG - chr2_2:15424386-15424405 Msa0240460:three_prime_UTR 20.0%
!! TTCCATAATCTTCATTATAT+GGG - chr2_2:15424387-15424406 Msa0240460:three_prime_UTR 20.0%
!! ACATAATAATGAAACATGAT+TGG + chr2_2:15424916-15424935 None:intergenic 20.0%
!!! GAAATTAATTCGAGTTTAAT+TGG + chr2_2:15425047-15425066 None:intergenic 20.0%
!!! TTTTGATATTGTTTTTGACA+TGG - chr2_2:15425083-15425102 Msa0240460:intron 20.0%
!!! TTTTTTTGGCATATGTTATT+TGG - chr2_2:15425223-15425242 Msa0240460:intron 20.0%
!!! TTTTTTGGCATATGTTATTT+GGG - chr2_2:15425224-15425243 Msa0240460:intron 20.0%
!!! ATGCAAATTACTTTGTTTAA+TGG - chr2_2:15425362-15425381 Msa0240460:intron 20.0%
!! TAAAGAAAAAAATTCATGCA+TGG + chr2_2:15425388-15425407 None:intergenic 20.0%
!! ATTCCAATATGAATTGAAAT+TGG - chr2_2:15425525-15425544 Msa0240460:CDS 20.0%
!! CTCTTTAATAAAAACAAACT+AGG + chr2_2:15425766-15425785 None:intergenic 20.0%
!! AAGTTAAAACTCTTAAAATG+GGG + chr2_2:15425879-15425898 None:intergenic 20.0%
!!! AAAAATCAATTTGAAGCAAA+AGG + chr2_2:15425941-15425960 None:intergenic 20.0%
!! ATATGATAAGTTAATTTACC+TGG - chr2_2:15426065-15426084 Msa0240460:intron 20.0%
!!! TTTTATTTATACCGATTTCA+AGG - chr2_2:15426170-15426189 Msa0240460:intron 20.0%
!!! TTTATTTATACCGATTTCAA+GGG - chr2_2:15426171-15426190 Msa0240460:intron 20.0%
!! TTATTAGAATGGAAAGATAT+TGG - chr2_2:15426505-15426524 Msa0240460:intron 20.0%
!! TCAAGCATAAAAAGAAATAT+TGG + chr2_2:15426712-15426731 None:intergenic 20.0%
!! AAATAAGTATACTTACTTTG+TGG + chr2_2:15426829-15426848 None:intergenic 20.0%
!! TATATTGTCACTGTTATATA+TGG + chr2_2:15426886-15426905 None:intergenic 20.0%
!! ATTTACTATATAAATCCAGT+TGG - chr2_2:15428098-15428117 Msa0240460:intron 20.0%
!! TCTTAATATCAATACATGAA+AGG - chr2_2:15428403-15428422 Msa0240460:intron 20.0%
!! GATACAAAACTAAATCAAAT+CGG - chr2_2:15428480-15428499 Msa0240460:intron 20.0%
!! ATGATTCATAAGAATGAATT+GGG + chr2_2:15428575-15428594 None:intergenic 20.0%
!! AATGATTCATAAGAATGAAT+TGG + chr2_2:15428576-15428595 None:intergenic 20.0%
!!! ATAGTAAGATACTTTTTTTG+TGG - chr2_2:15428637-15428656 Msa0240460:CDS 20.0%
!! TATATTGTATATATAGTAGC+AGG - chr2_2:15429352-15429371 Msa0240460:CDS 20.0%
!!! AATATTTTGCACTTGTAATA+TGG - chr2_2:15429414-15429433 Msa0240460:CDS 20.0%
! CTGAAATGAAATTTAATGTG+GGG + chr2_2:15424061-15424080 None:intergenic 25.0%
! CACTGAAATGAAATTTAATG+TGG + chr2_2:15424063-15424082 None:intergenic 25.0%
! CACATTAAATTTCATTTCAG+TGG - chr2_2:15424061-15424080 Msa0240460:three_prime_UTR 25.0%
! TGAGGATCATAAAAAATGTT+GGG + chr2_2:15424097-15424116 None:intergenic 25.0%
! ATGAGGATCATAAAAAATGT+TGG + chr2_2:15424098-15424117 None:intergenic 25.0%
! GGAAAACAATAAAAACATTG+TGG + chr2_2:15424148-15424167 None:intergenic 25.0%
!!! TGAGTTATTTCTTGTAACTA+TGG - chr2_2:15424240-15424259 Msa0240460:three_prime_UTR 25.0%
!!! TGATTTCTTGCTTTTTGTTT+TGG - chr2_2:15424529-15424548 Msa0240460:exon 25.0%
!!! AATCTTGTTTTTTCACTATG+TGG - chr2_2:15424682-15424701 Msa0240460:CDS 25.0%
! AGAAATAATTAGGTATGCAA+TGG + chr2_2:15424796-15424815 None:intergenic 25.0%
! ATTGCATACCTAATTATTTC+TGG - chr2_2:15424795-15424814 Msa0240460:intron 25.0%
!! TTGCATACCTAATTATTTCT+GGG - chr2_2:15424796-15424815 Msa0240460:intron 25.0%
!! GATATCTGTAGACATATTTT+AGG + chr2_2:15424957-15424976 None:intergenic 25.0%
!!! CATTGGAATTGTCATTTTTT+TGG - chr2_2:15425209-15425228 Msa0240460:intron 25.0%
!!! TAATTTTTCAGTTTATGGAG+AGG + chr2_2:15425620-15425639 None:intergenic 25.0%
! AGAAAAATATTTGCAAACTC+TGG + chr2_2:15425718-15425737 None:intergenic 25.0%
!!! CTAACTCATTTTTACAAAAC+CGG + chr2_2:15425855-15425874 None:intergenic 25.0%
! TTAAAACAAGAATCTTGACA+TGG - chr2_2:15425899-15425918 Msa0240460:intron 25.0%
! AAATTACATGATCATTGCAA+AGG + chr2_2:15426032-15426051 None:intergenic 25.0%
! GAAAAAAAGTTAAGTAAACC+AGG + chr2_2:15426086-15426105 None:intergenic 25.0%
!!! TTATTTATACCGATTTCAAG+GGG - chr2_2:15426172-15426191 Msa0240460:intron 25.0%
! CATAATCTTTATTGTGTTCA+TGG - chr2_2:15426645-15426664 Msa0240460:CDS 25.0%
!!! TGTGATTTTTTCCATCTAAA+GGG + chr2_2:15427013-15427032 None:intergenic 25.0%
!!! ATGTGATTTTTTCCATCTAA+AGG + chr2_2:15427014-15427033 None:intergenic 25.0%
!! AGTTAGCTTAAAATCTACTT+TGG + chr2_2:15427273-15427292 None:intergenic 25.0%
!! TGTGTTCATTTTGTTCTATT+AGG - chr2_2:15427338-15427357 Msa0240460:intron 25.0%
! CCTTTCTATTATTCAAAGTT+AGG + chr2_2:15427755-15427774 None:intergenic 25.0%
! CCTAACTTTGAATAATAGAA+AGG - chr2_2:15427752-15427771 Msa0240460:intron 25.0%
!!! CTTTTGAATGTTTAAAACCA+CGG - chr2_2:15427870-15427889 Msa0240460:intron 25.0%
!! ATTTGATTGTTATTATCTGC+AGG - chr2_2:15427914-15427933 Msa0240460:intron 25.0%
! TTTATCAACCTTGATGTTAT+TGG + chr2_2:15428252-15428271 None:intergenic 25.0%
!! GTTGATAAAATTGAGCAAAA+TGG - chr2_2:15428263-15428282 Msa0240460:intron 25.0%
!!! GAAAATATACCTTTAAAGTC+TGG + chr2_2:15428359-15428378 None:intergenic 25.0%
!! AGTACCTTTTTATCTTACAA+TGG + chr2_2:15429485-15429504 None:intergenic 25.0%
!! AAGGTACTATAATCCTTAAA+AGG - chr2_2:15429497-15429516 Msa0240460:CDS 25.0%
! AAACAAGTTTATAAGGGTTA+TGG + chr2_2:15429612-15429631 None:intergenic 25.0%
ATGAAATTTAATGTGGGGAT+GGG + chr2_2:15424056-15424075 None:intergenic 30.0%
AATGAAATTTAATGTGGGGA+TGG + chr2_2:15424057-15424076 None:intergenic 30.0%
TGGAACCCATGATAATATTA+AGG + chr2_2:15424128-15424147 None:intergenic 30.0%
TAAAAATAGTAAGTGGGAGA+AGG + chr2_2:15424169-15424188 None:intergenic 30.0%
AGCCCATATAATGAAGATTA+TGG + chr2_2:15424392-15424411 None:intergenic 30.0%
!!! CTTGCTTTTTGTTTTGGTTT+TGG - chr2_2:15424535-15424554 Msa0240460:exon 30.0%
!! TGCATACCTAATTATTTCTG+GGG - chr2_2:15424797-15424816 Msa0240460:intron 30.0%
TATGTAGAAATCACATACTC+AGG + chr2_2:15424834-15424853 None:intergenic 30.0%
ATTAATCCAATGCACAGATA+AGG + chr2_2:15424861-15424880 None:intergenic 30.0%
! GTTTTTGACATGGATTTTGA+TGG - chr2_2:15425093-15425112 Msa0240460:intron 30.0%
TTTCTATGCTTATACTATGC+AGG - chr2_2:15425248-15425267 Msa0240460:intron 30.0%
TAGTGAGATTAAGATAACAC+TGG - chr2_2:15425493-15425512 Msa0240460:CDS 30.0%
CCTCCAATTTCAATTCATAT+TGG + chr2_2:15425531-15425550 None:intergenic 30.0%
CCAATATGAATTGAAATTGG+AGG - chr2_2:15425528-15425547 Msa0240460:CDS 30.0%
GCATAGAAGTCTCAAAATTT+GGG + chr2_2:15425661-15425680 None:intergenic 30.0%
AGCATAGAAGTCTCAAAATT+TGG + chr2_2:15425662-15425681 None:intergenic 30.0%
TTTATTAAAGAGTCCCACAT+CGG - chr2_2:15425774-15425793 Msa0240460:CDS 30.0%
TCTGAACACGTGTTTATAAA+TGG - chr2_2:15425809-15425828 Msa0240460:CDS 30.0%
CTGAACACGTGTTTATAAAT+GGG - chr2_2:15425810-15425829 Msa0240460:CDS 30.0%
TGAACACGTGTTTATAAATG+GGG - chr2_2:15425811-15425830 Msa0240460:CDS 30.0%
!! CGGTTTTGTAAAAATGAGTT+AGG - chr2_2:15425853-15425872 Msa0240460:CDS 30.0%
GTCAGTAATACTTAAGACAA+AGG + chr2_2:15425965-15425984 None:intergenic 30.0%
! TTGCACATGTTGGAAATTTT+GGG - chr2_2:15426109-15426128 Msa0240460:intron 30.0%
ATGCTGCAAAATATCATGTA+TGG - chr2_2:15426233-15426252 Msa0240460:CDS 30.0%
TGTTATCCTAAATCCTTCAA+AGG - chr2_2:15426410-15426429 Msa0240460:CDS 30.0%
TAATCAACAACTACCTTTGA+AGG + chr2_2:15426426-15426445 None:intergenic 30.0%
! CAAAGGTAGTTGTTGATTAT+TGG - chr2_2:15426427-15426446 Msa0240460:CDS 30.0%
TCCATTCTAATAACTGCAAA+GGG + chr2_2:15426498-15426517 None:intergenic 30.0%
TTCCATTCTAATAACTGCAA+AGG + chr2_2:15426499-15426518 None:intergenic 30.0%
TTGAAGGAAAATGAAGCTTA+GGG + chr2_2:15426940-15426959 None:intergenic 30.0%
TTAAGAGAAAGAATCACTGA+AGG - chr2_2:15427074-15427093 Msa0240460:CDS 30.0%
GTACGAAAACCTTATATTAG+TGG - chr2_2:15427360-15427379 Msa0240460:intron 30.0%
AAAATATTTCTTGGTCGACA+AGG + chr2_2:15427457-15427476 None:intergenic 30.0%
TTTACTTTATCAGAAAAGCG+TGG + chr2_2:15427550-15427569 None:intergenic 30.0%
TAGAAAGTTAGACTAACCAA+TGG + chr2_2:15427613-15427632 None:intergenic 30.0%
!! TTTCTTCGATTTGTGTCTTT+TGG - chr2_2:15427648-15427667 Msa0240460:CDS 30.0%
! TATGTCATTTCATCTACCTT+AGG - chr2_2:15428047-15428066 Msa0240460:intron 30.0%
CTATATAAATCCAGTTGGAT+TGG - chr2_2:15428103-15428122 Msa0240460:intron 30.0%
AAGTTAACTACCATACAGTA+TGG - chr2_2:15428326-15428345 Msa0240460:intron 30.0%
! TTTTATCGGTAGTGTATCTT+AGG - chr2_2:15428761-15428780 Msa0240460:intron 30.0%
CGATTCACGATTTGAAAAAT+TGG - chr2_2:15428799-15428818 Msa0240460:intron 30.0%
TGTAAAAAAGGGACTAATAC+TGG + chr2_2:15429056-15429075 None:intergenic 30.0%
! ATATATGCATGCTTTTCCAT+TGG + chr2_2:15429335-15429354 None:intergenic 30.0%
CAGTCCATTGTAAGATAAAA+AGG - chr2_2:15429478-15429497 Msa0240460:CDS 30.0%
ATCCTTAAAAGGACTCTATA+AGG - chr2_2:15429508-15429527 Msa0240460:CDS 30.0%
! TTCCTTATAGAGTCCTTTTA+AGG + chr2_2:15429513-15429532 None:intergenic 30.0%
ATATGATTACCTTCAACGAA+GGG + chr2_2:15429746-15429765 None:intergenic 30.0%
AATATGATTACCTTCAACGA+AGG + chr2_2:15429747-15429766 None:intergenic 30.0%
GGATGGGATAATATAGTAGA+GGG + chr2_2:15424040-15424059 None:intergenic 35.0%
! AGTCCTTTGCTTTCTAAGAA+AGG - chr2_2:15424283-15424302 Msa0240460:three_prime_UTR 35.0%
TCACCTTTCTTAGAAAGCAA+AGG + chr2_2:15424289-15424308 None:intergenic 35.0%
AAGAAAGGTGATGAAACTGA+TGG - chr2_2:15424298-15424317 Msa0240460:three_prime_UTR 35.0%
GTAGCTGACACAACAAAATT+AGG + chr2_2:15424343-15424362 None:intergenic 35.0%
TTGTTGTGTCAGCTACTAAA+TGG - chr2_2:15424347-15424366 Msa0240460:three_prime_UTR 35.0%
! TGCATGGATTGTTCACAAAA+TGG - chr2_2:15424443-15424462 Msa0240460:three_prime_UTR 35.0%
AAATGGCTTAATTTCAGCAG+TGG - chr2_2:15424460-15424479 Msa0240460:three_prime_UTR 35.0%
TGTATTACCTGTGATTCCAA+AGG + chr2_2:15424491-15424510 None:intergenic 35.0%
AGAAATGCAATTGCAAGAAC+AGG + chr2_2:15424771-15424790 None:intergenic 35.0%
!! ATACCTAATTATTTCTGGGG+AGG - chr2_2:15424800-15424819 Msa0240460:intron 35.0%
TACTTTCCTTATCTGTGCAT+TGG - chr2_2:15424852-15424871 Msa0240460:intron 35.0%
! ACTTTTCCGATCCTTATCAA+TGG - chr2_2:15425156-15425175 Msa0240460:intron 35.0%
AATGGTCCATTGATAAGGAT+CGG + chr2_2:15425165-15425184 None:intergenic 35.0%
ATCCTTATCAATGGACCATT+TGG - chr2_2:15425165-15425184 Msa0240460:intron 35.0%
TCCTTATCAATGGACCATTT+GGG - chr2_2:15425166-15425185 Msa0240460:intron 35.0%
! AGTTATCATTTAGAGCCAAG+AGG - chr2_2:15425292-15425311 Msa0240460:intron 35.0%
TTCTAAACTGTAGTACCTCT+TGG + chr2_2:15425310-15425329 None:intergenic 35.0%
TTGACAGTGCTTATTAACCA+CGG - chr2_2:15425586-15425605 Msa0240460:CDS 35.0%
!!! ATTTTGAGACTTCTATGCTG+AGG - chr2_2:15425663-15425682 Msa0240460:CDS 35.0%
ACTGACAATAGTCATTAGCA+TGG - chr2_2:15425979-15425998 Msa0240460:intron 35.0%
!!! TTTTTTCAGCTTGCACATGT+TGG - chr2_2:15426099-15426118 Msa0240460:intron 35.0%
! CTTGCACATGTTGGAAATTT+TGG - chr2_2:15426108-15426127 Msa0240460:intron 35.0%
! ATTTTGCAGCATGTTCGAAA+GGG + chr2_2:15426225-15426244 None:intergenic 35.0%
! TATTTTGCAGCATGTTCGAA+AGG + chr2_2:15426226-15426245 None:intergenic 35.0%
GCAAAATATCATGTATGGCT+AGG - chr2_2:15426238-15426257 Msa0240460:CDS 35.0%
GAGTAAAAATCACCATTGTG+AGG + chr2_2:15426267-15426286 None:intergenic 35.0%
! ATGGTGATTTTTACTCTCCA+TGG - chr2_2:15426271-15426290 Msa0240460:CDS 35.0%
CAATAACATAGAAGAGTCCA+TGG + chr2_2:15426291-15426310 None:intergenic 35.0%
GACTCTTCTATGTTATTGAG+TGG - chr2_2:15426293-15426312 Msa0240460:CDS 35.0%
CTATGTTATTGAGTGGCTAA+TGG - chr2_2:15426300-15426319 Msa0240460:CDS 35.0%
GAAGACTCACTTCTTGAATT+AGG + chr2_2:15426333-15426352 None:intergenic 35.0%
! CAACTACCTTTGAAGGATTT+AGG + chr2_2:15426419-15426438 None:intergenic 35.0%
CATTCTAATAACTGCAAAGG+GGG + chr2_2:15426496-15426515 None:intergenic 35.0%
CCATTCTAATAACTGCAAAG+GGG + chr2_2:15426497-15426516 None:intergenic 35.0%
!!! TGGCGACTTTATTTTTGCTA+TGG - chr2_2:15426678-15426697 Msa0240460:CDS 35.0%
!!! TTTATTTTTGCTATGGCTGC+TGG - chr2_2:15426685-15426704 Msa0240460:CDS 35.0%
! TTATGCTTGATCGATTTCTG+AGG - chr2_2:15426722-15426741 Msa0240460:CDS 35.0%
CATTTACTGTCCTTCTTGAT+TGG + chr2_2:15426753-15426772 None:intergenic 35.0%
CAGTAAATGTAATCTCATCG+AGG - chr2_2:15426764-15426783 Msa0240460:CDS 35.0%
CTTGAAGGAAAATGAAGCTT+AGG + chr2_2:15426941-15426960 None:intergenic 35.0%
!! GCTTCATTTTCCTTCAAGTT+CGG - chr2_2:15426943-15426962 Msa0240460:intron 35.0%
!! CTTCATTTTCCTTCAAGTTC+GGG - chr2_2:15426944-15426963 Msa0240460:intron 35.0%
! TCACATTGCTGTTCTCATTA+AGG - chr2_2:15427028-15427047 Msa0240460:CDS 35.0%
TCATTAAGGTTCTTGGCAAA+TGG - chr2_2:15427042-15427061 Msa0240460:CDS 35.0%
TTTATCTGTTCAGCCTCATA+CGG - chr2_2:15427112-15427131 Msa0240460:CDS 35.0%
ACCATATCACTTGATGTAAG+TGG - chr2_2:15427175-15427194 Msa0240460:CDS 35.0%
GAAAACCTTATATTAGTGGC+AGG - chr2_2:15427364-15427383 Msa0240460:intron 35.0%
GAATATCGCTCAATATAGCA+AGG + chr2_2:15427411-15427430 None:intergenic 35.0%
ACAGATTGTTTCCATGTCAA+CGG + chr2_2:15427527-15427546 None:intergenic 35.0%
ATGTACATATCTTCGTCACT+CGG - chr2_2:15427575-15427594 Msa0240460:CDS 35.0%
AAAGTTAGACTAACCAATGG+AGG + chr2_2:15427610-15427629 None:intergenic 35.0%
! TTGTTATTATCTGCAGGAAG+AGG - chr2_2:15427920-15427939 Msa0240460:intron 35.0%
TGTTATTATCTGCAGGAAGA+GGG - chr2_2:15427921-15427940 Msa0240460:intron 35.0%
! AAGGGACAGAGTGATTTTAT+TGG + chr2_2:15427960-15427979 None:intergenic 35.0%
TAATCACTAGGCATAGGAAA+GGG + chr2_2:15427978-15427997 None:intergenic 35.0%
ATAATCACTAGGCATAGGAA+AGG + chr2_2:15427979-15427998 None:intergenic 35.0%
TTTCCTATGCCTAGTGATTA+TGG - chr2_2:15427978-15427997 Msa0240460:intron 35.0%
ATTCCATAATCACTAGGCAT+AGG + chr2_2:15427984-15428003 None:intergenic 35.0%
TGATTATGGAATGTCTGGTT+TGG - chr2_2:15427992-15428011 Msa0240460:intron 35.0%
TTGGTACAGGAAACAATTTC+TGG - chr2_2:15428015-15428034 Msa0240460:intron 35.0%
AAGTAAGATCACAAAGCCTA+AGG + chr2_2:15428066-15428085 None:intergenic 35.0%
!! ATCCAGTTGGATTGGTTATA+TGG - chr2_2:15428111-15428130 Msa0240460:intron 35.0%
TTGGTTATATGGTGGTACAA+AGG - chr2_2:15428122-15428141 Msa0240460:intron 35.0%
TGGTTATATGGTGGTACAAA+GGG - chr2_2:15428123-15428142 Msa0240460:intron 35.0%
GGAAAAGCAAAGTTCTCTAA+AGG - chr2_2:15428220-15428239 Msa0240460:intron 35.0%
GGATAAGTCCAATAACATCA+AGG - chr2_2:15428241-15428260 Msa0240460:intron 35.0%
TACATGAAAGGACTATTGTG+TGG - chr2_2:15428415-15428434 Msa0240460:intron 35.0%
ATCAAATCGGTATGAATCTC+TGG - chr2_2:15428493-15428512 Msa0240460:intron 35.0%
TGTCTGACTACACTAAGTTT+AGG + chr2_2:15428600-15428619 None:intergenic 35.0%
TCGTGAATCGAATCTTACTA+TGG + chr2_2:15428789-15428808 None:intergenic 35.0%
TGCAAAATAAGCTCAAAGCA+AGG + chr2_2:15428860-15428879 None:intergenic 35.0%
CGATTCACGATTTGAAAAGT+AGG - chr2_2:15428903-15428922 Msa0240460:intron 35.0%
!!! TTAGTCCCTTTTTTACAACG+TGG - chr2_2:15429059-15429078 Msa0240460:CDS 35.0%
CTCTTCCACGTTGTAAAAAA+GGG + chr2_2:15429067-15429086 None:intergenic 35.0%
TTGAATCCATGTCAGAGAAA+TGG - chr2_2:15429122-15429141 Msa0240460:intron 35.0%
TGAATCCATGTCAGAGAAAT+GGG - chr2_2:15429123-15429142 Msa0240460:intron 35.0%
CTAGAATACCAACATCAACA+TGG + chr2_2:15429150-15429169 None:intergenic 35.0%
!! GATGTTGGTATTCTAGTTTG+TGG - chr2_2:15429154-15429173 Msa0240460:intron 35.0%
GGGATGGGATAATATAGTAG+AGG + chr2_2:15424041-15424060 None:intergenic 40.0%
! CAGCTACTAAATGGACTCTT+AGG - chr2_2:15424356-15424375 Msa0240460:three_prime_UTR 40.0%
TTACCATCAGAATCTGTGCA+TGG - chr2_2:15424427-15424446 Msa0240460:three_prime_UTR 40.0%
AATCCATGCACAGATTCTGA+TGG + chr2_2:15424433-15424452 None:intergenic 40.0%
AAACTACTTGTGTGTTGTGC+AGG - chr2_2:15424720-15424739 Msa0240460:intron 40.0%
GATCCTCCCCAGAAATAATT+AGG + chr2_2:15424806-15424825 None:intergenic 40.0%
!! TTGACATGGATTTTGATGGC+AGG - chr2_2:15425097-15425116 Msa0240460:intron 40.0%
TAGGCGAAATCTTGGATACT+TGG + chr2_2:15425133-15425152 None:intergenic 40.0%
AGTATCCAAGATTTCGCCTA+TGG - chr2_2:15425133-15425152 Msa0240460:intron 40.0%
AAAGTCCATAGGCGAAATCT+TGG + chr2_2:15425141-15425160 None:intergenic 40.0%
TAAGGATCGGAAAAGTCCAT+AGG + chr2_2:15425152-15425171 None:intergenic 40.0%
CCTTATCAATGGACCATTTG+GGG - chr2_2:15425167-15425186 Msa0240460:intron 40.0%
AACCTCTTGAAACCAGTCTT+TGG - chr2_2:15425407-15425426 Msa0240460:intron 40.0%
!! TACCAAAGACTGGTTTCAAG+AGG + chr2_2:15425412-15425431 None:intergenic 40.0%
AACCAGTCTTTGGTACGTTA+AGG - chr2_2:15425417-15425436 Msa0240460:intron 40.0%
TTCCTTAACGTACCAAAGAC+TGG + chr2_2:15425422-15425441 None:intergenic 40.0%
CAGTTTATGGAGAGGATTGT+TGG + chr2_2:15425612-15425631 None:intergenic 40.0%
! AGCCATATTTTGTCCGATGT+GGG + chr2_2:15425790-15425809 None:intergenic 40.0%
AGAACAGATCCCCTTGAAAT+CGG + chr2_2:15426184-15426203 None:intergenic 40.0%
CGAAAGGGATATCTATGAAG+CGG + chr2_2:15426210-15426229 None:intergenic 40.0%
GTTATTGAGTGGCTAATGGA+AGG - chr2_2:15426304-15426323 Msa0240460:CDS 40.0%
CCCCTTTGCAGTTATTAGAA+TGG - chr2_2:15426494-15426513 Msa0240460:intron 40.0%
ACATCAACAAACCAGCTACA+AGG + chr2_2:15426558-15426577 None:intergenic 40.0%
!! TTGTAGCTGGTTTGTTGATG+TGG - chr2_2:15426557-15426576 Msa0240460:intron 40.0%
!! TGTAGCTGGTTTGTTGATGT+GGG - chr2_2:15426558-15426577 Msa0240460:intron 40.0%
! GTGTTCATGGCTTTGCATAT+TGG - chr2_2:15426658-15426677 Msa0240460:CDS 40.0%
ACGATAATTCCCGAACTTGA+AGG + chr2_2:15426956-15426975 None:intergenic 40.0%
! TTCAAGTTCGGGAATTATCG+TGG - chr2_2:15426955-15426974 Msa0240460:intron 40.0%
GTTTCTTCTAGCCCTTTAGA+TGG - chr2_2:15426999-15427018 Msa0240460:CDS 40.0%
GCTGTTCTCATTAAGGTTCT+TGG - chr2_2:15427035-15427054 Msa0240460:CDS 40.0%
TATGGTACTTCGTGTCCATA+TGG + chr2_2:15427161-15427180 None:intergenic 40.0%
GCCACTTACATCAAGTGATA+TGG + chr2_2:15427179-15427198 None:intergenic 40.0%
AACCTTATATTAGTGGCAGG+CGG - chr2_2:15427367-15427386 Msa0240460:intron 40.0%
TCGCTCAATATAGCAAGGAA+AGG + chr2_2:15427406-15427425 None:intergenic 40.0%
TGTACATATCTTCGTCACTC+GGG - chr2_2:15427576-15427595 Msa0240460:CDS 40.0%
! ATGTTTAAAACCACGGTCGT+CGG - chr2_2:15427877-15427896 Msa0240460:intron 40.0%
CCAGACATTCCATAATCACT+AGG + chr2_2:15427990-15428009 None:intergenic 40.0%
CCTAGTGATTATGGAATGTC+TGG - chr2_2:15427987-15428006 Msa0240460:intron 40.0%
!! TATGGAATGTCTGGTTTGGT+TGG - chr2_2:15427996-15428015 Msa0240460:intron 40.0%
!! ACAGGAAACAATTTCTGGTC+TGG - chr2_2:15428020-15428039 Msa0240460:intron 40.0%
CACCATATAACCAATCCAAC+TGG + chr2_2:15428116-15428135 None:intergenic 40.0%
!! CAGTTGGATTGGTTATATGG+TGG - chr2_2:15428114-15428133 Msa0240460:intron 40.0%
GTTGCAGGTGTAGTTATCTT+CGG - chr2_2:15428167-15428186 Msa0240460:intron 40.0%
AGTTATCTTCGGTGGTATAG+TGG - chr2_2:15428178-15428197 Msa0240460:intron 40.0%
! GTGGTATAGTGGTTGGATTT+TGG - chr2_2:15428189-15428208 Msa0240460:intron 40.0%
!! TGGTTGGATTTTGGCATATG+TGG - chr2_2:15428198-15428217 Msa0240460:intron 40.0%
!! GGTTGGATTTTGGCATATGT+GGG - chr2_2:15428199-15428218 Msa0240460:intron 40.0%
! AATTGAGCAAAATGGCTCTG+TGG - chr2_2:15428271-15428290 Msa0240460:intron 40.0%
TGGGATTCACCATAGAGAAT+CGG + chr2_2:15428556-15428575 None:intergenic 40.0%
CCTCTTCCACGTTGTAAAAA+AGG + chr2_2:15429068-15429087 None:intergenic 40.0%
!!! CCTTTTTTACAACGTGGAAG+AGG - chr2_2:15429065-15429084 Msa0240460:CDS 40.0%
GAATCCATGTCAGAGAAATG+GGG - chr2_2:15429124-15429143 Msa0240460:intron 40.0%
! CAAGTGTTGCACAAGAAATC+AGG - chr2_2:15429194-15429213 Msa0240460:intron 40.0%
AAATGGAAGATGGGGTGATA+AGG + chr2_2:15429241-15429260 None:intergenic 40.0%
TGACTGTGGAAATGGAAGAT+GGG + chr2_2:15429250-15429269 None:intergenic 40.0%
ATGACTGTGGAAATGGAAGA+TGG + chr2_2:15429251-15429270 None:intergenic 40.0%
CAAAGCTATGACTGTGGAAA+TGG + chr2_2:15429258-15429277 None:intergenic 40.0%
AGAGATCAAAGCTATGACTG+TGG + chr2_2:15429264-15429283 None:intergenic 40.0%
! TCCTTCCTATGATGGAAAGA+TGG - chr2_2:15429288-15429307 Msa0240460:intron 40.0%
TCCATCTTTCCATCATAGGA+AGG + chr2_2:15429292-15429311 None:intergenic 40.0%
GTCTTCCATCTTTCCATCAT+AGG + chr2_2:15429296-15429315 None:intergenic 40.0%
ATACCTTCACCATTCACCAA+TGG - chr2_2:15429316-15429335 Msa0240460:intron 40.0%
TTTCCATTGGTGAATGGTGA+AGG + chr2_2:15429322-15429341 None:intergenic 40.0%
! CATGCTTTTCCATTGGTGAA+TGG + chr2_2:15429328-15429347 None:intergenic 40.0%
TGCTGATGACTAATCTCTCT+CGG + chr2_2:15429382-15429401 None:intergenic 40.0%
ACTCTATAAGGAACTCTGAG+TGG - chr2_2:15429520-15429539 Msa0240460:CDS 40.0%
CTCTATAAGGAACTCTGAGT+GGG - chr2_2:15429521-15429540 Msa0240460:CDS 40.0%
CTATATGTTCCCTTCGTTGA+AGG - chr2_2:15429734-15429753 Msa0240460:five_prime_UTR 40.0%
TTCAGCAGTGGAACTTCCTT+TGG - chr2_2:15424472-15424491 Msa0240460:three_prime_UTR 45.0%
!! GGAACTTCCTTTGGAATCAC+AGG - chr2_2:15424481-15424500 Msa0240460:three_prime_UTR 45.0%
CCCCAAATGGTCCATTGATA+AGG + chr2_2:15425170-15425189 None:intergenic 45.0%
GTTGCAGAAACAACCCCAAA+TGG + chr2_2:15425183-15425202 None:intergenic 45.0%
GTTTCTGCAACAGAGCTCAT+TGG - chr2_2:15425192-15425211 Msa0240460:intron 45.0%
GTCCCACATCGGACAAAATA+TGG - chr2_2:15425785-15425804 Msa0240460:CDS 45.0%
! GAGCCATATTTTGTCCGATG+TGG + chr2_2:15425791-15425810 None:intergenic 45.0%
GTAATCCTCATCTCACAAGC+CGG - chr2_2:15425833-15425852 Msa0240460:CDS 45.0%
!!! GGAAATTTTGGGACTCCGTT+CGG - chr2_2:15426120-15426139 Msa0240460:intron 45.0%
!!! GAAATTTTGGGACTCCGTTC+GGG - chr2_2:15426121-15426140 Msa0240460:intron 45.0%
CGGGATTGGATTAATGTGCT+TGG - chr2_2:15426144-15426163 Msa0240460:intron 45.0%
!! ATTGGTGTTGCCAATCTAGC+AGG - chr2_2:15426523-15426542 Msa0240460:intron 45.0%
GCTGATAACTCCTGCTAGAT+TGG + chr2_2:15426536-15426555 None:intergenic 45.0%
TGAGGTTCTGCCAATCAAGA+AGG - chr2_2:15426740-15426759 Msa0240460:CDS 45.0%
GGGCTAGAAGAAACACTGAA+TGG + chr2_2:15426993-15427012 None:intergenic 45.0%
AAGGTTCTTGGCAAATGGAC+CGG - chr2_2:15427047-15427066 Msa0240460:CDS 45.0%
GATTCTTTCTCTTAACCCCC+CGG + chr2_2:15427069-15427088 None:intergenic 45.0%
TCATACGGTGGTAACAGCTT+CGG - chr2_2:15427127-15427146 Msa0240460:CDS 45.0%
TACCGCCTGCCACTAATATA+AGG + chr2_2:15427372-15427391 None:intergenic 45.0%
ATATTAGTGGCAGGCGGTAT+TGG - chr2_2:15427373-15427392 Msa0240460:intron 45.0%
CGATATTCTCCATCGTGTGA+GGG - chr2_2:15427423-15427442 Msa0240460:intron 45.0%
ATGTCAACGGTCGAAAGAAG+TGG + chr2_2:15427514-15427533 None:intergenic 45.0%
ACTTCTTTCGACCGTTGACA+TGG - chr2_2:15427513-15427532 Msa0240460:CDS 45.0%
GTCGTAGATGTAGGCACAAT+TGG - chr2_2:15427796-15427815 Msa0240460:intron 45.0%
!! ATGTCTGGTTTGGTTGGTAC+AGG - chr2_2:15428002-15428021 Msa0240460:intron 45.0%
GCTACTACTTGTAGTCTGCA+TGG - chr2_2:15428145-15428164 Msa0240460:intron 45.0%
ATCTTCGGTGGTATAGTGGT+TGG - chr2_2:15428182-15428201 Msa0240460:intron 45.0%
! AAATGGCTCTGTGGATCACA+AGG - chr2_2:15428280-15428299 Msa0240460:intron 45.0%
CTACCATACAGTATGGCTCT+AGG - chr2_2:15428333-15428352 Msa0240460:intron 45.0%
TCTTGAGTCCCGATTCTCTA+TGG - chr2_2:15428544-15428563 Msa0240460:CDS 45.0%
GGGATTCACCATAGAGAATC+GGG + chr2_2:15428555-15428574 None:intergenic 45.0%
CGTGGAAGAGGTTACTGATA+TGG - chr2_2:15429077-15429096 Msa0240460:intron 45.0%
AAATGGGGCCATGTTGATGT+TGG - chr2_2:15429139-15429158 Msa0240460:intron 45.0%
ACACTTGACTGAAGAGTTGG+AGG + chr2_2:15429181-15429200 None:intergenic 45.0%
GCAACACTTGACTGAAGAGT+TGG + chr2_2:15429184-15429203 None:intergenic 45.0%
GACTGTGGAAATGGAAGATG+GGG + chr2_2:15429249-15429268 None:intergenic 45.0%
! CTCTAGCTTCCTTCCTATGA+TGG - chr2_2:15429280-15429299 Msa0240460:intron 45.0%
!! CAAAACCGGCTTGTGAGATG+AGG + chr2_2:15425841-15425860 None:intergenic 50.0%
TTAATCCAATCCCGCCCGAA+CGG + chr2_2:15426138-15426157 None:intergenic 50.0%
ATGGCTAGGACACCTCACAA+TGG - chr2_2:15426252-15426271 Msa0240460:CDS 50.0%
! GGAGTTATCAGCCTTGTAGC+TGG - chr2_2:15426544-15426563 Msa0240460:intron 50.0%
AAATTCCACGTTCGCACTCC+AGG + chr2_2:15426595-15426614 None:intergenic 50.0%
TTTCCACAGTGCCACAAGGA+AGG + chr2_2:15426792-15426811 None:intergenic 50.0%
TCCTTGTGGCACTGTGGAAA+TGG - chr2_2:15426792-15426811 Msa0240460:CDS 50.0%
ACCATTTCCACAGTGCCACA+AGG + chr2_2:15426796-15426815 None:intergenic 50.0%
GGGAATTATCGTGGCTTCAG+TGG - chr2_2:15426964-15426983 Msa0240460:intron 50.0%
AGGTTCTTGGCAAATGGACC+GGG - chr2_2:15427048-15427067 Msa0240460:CDS 50.0%
ATCTGTTCAGCCTCATACGG+TGG - chr2_2:15427115-15427134 Msa0240460:CDS 50.0%
GAAGCTGTTACCACCGTATG+AGG + chr2_2:15427128-15427147 None:intergenic 50.0%
GTGGTAACAGCTTCGGTTGA+GGG - chr2_2:15427134-15427153 Msa0240460:CDS 50.0%
TGGTAACAGCTTCGGTTGAG+GGG - chr2_2:15427135-15427154 Msa0240460:CDS 50.0%
GCGATATTCTCCATCGTGTG+AGG - chr2_2:15427422-15427441 Msa0240460:intron 50.0%
ATTCTCCATCGTGTGAGGGA+TGG - chr2_2:15427427-15427446 Msa0240460:intron 50.0%
TTCTCCATCGTGTGAGGGAT+GGG - chr2_2:15427428-15427447 Msa0240460:intron 50.0%
TCGGGAATCAGATCCTCCAT+TGG - chr2_2:15427594-15427613 Msa0240460:CDS 50.0%
CATCTACGACTGCAGAGAGT+GGG + chr2_2:15427786-15427805 None:intergenic 50.0%
ACATCTACGACTGCAGAGAG+TGG + chr2_2:15427787-15427806 None:intergenic 50.0%
CTCTCTGCAGTCGTAGATGT+AGG - chr2_2:15427787-15427806 Msa0240460:intron 50.0%
CTTGTAGTCTGCATGGTTGC+AGG - chr2_2:15428152-15428171 Msa0240460:intron 50.0%
GCAGGTGTAGTTATCTTCGG+TGG - chr2_2:15428170-15428189 Msa0240460:intron 50.0%
TGGCCTAGAGCCATACTGTA+TGG + chr2_2:15428339-15428358 None:intergenic 50.0%
!! GGCTCTAGGCCAGACTTTAA+AGG - chr2_2:15428347-15428366 Msa0240460:intron 50.0%
ATGGCCCCATTTCTCTGACA+TGG + chr2_2:15429131-15429150 None:intergenic 50.0%
ATGGAGAGGATTGTTGGCCG+TGG + chr2_2:15425606-15425625 None:intergenic 55.0%
!!! ATTTTGGGACTCCGTTCGGG+CGG - chr2_2:15426124-15426143 Msa0240460:intron 55.0%
! TCATCGAGGTGCCTTCCTTG+TGG - chr2_2:15426778-15426797 Msa0240460:CDS 55.0%
GGTTCTTGGCAAATGGACCG+GGG - chr2_2:15427049-15427068 Msa0240460:CDS 55.0%
GTTCTTGGCAAATGGACCGG+GGG - chr2_2:15427050-15427069 Msa0240460:CDS 55.0%
TTCTTGGCAAATGGACCGGG+GGG - chr2_2:15427051-15427070 Msa0240460:CDS 55.0%
GGTGGTAACAGCTTCGGTTG+AGG - chr2_2:15427133-15427152 Msa0240460:CDS 55.0%
GTTTCCCATCCCTCACACGA+TGG + chr2_2:15427435-15427454 None:intergenic 55.0%
AGAATAGTGACCGACGACCG+TGG + chr2_2:15427890-15427909 None:intergenic 55.0%
!!! TTTTGGGACTCCGTTCGGGC+GGG - chr2_2:15426125-15426144 Msa0240460:intron 60.0%
ATGTGGGTGACCTCGCTTCC+TGG - chr2_2:15426574-15426593 Msa0240460:intron 60.0%
GTGCCTTCCTTGTGGCACTG+TGG - chr2_2:15426786-15426805 Msa0240460:CDS 60.0%
GCTTCGGTTGAGGGGCCATA+TGG - chr2_2:15427143-15427162 Msa0240460:CDS 60.0%
CGTTCGCACTCCAGGAAGCG+AGG + chr2_2:15426587-15426606 None:intergenic 65.0%
CGCTTCCTGGAGTGCGAACG+TGG - chr2_2:15426587-15426606 Msa0240460:intron 65.0%
GGACTCCGTTCGGGCGGGAT+TGG - chr2_2:15426130-15426149 Msa0240460:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 15424027 15429804 15424027 ID=Msa0240460;Name=Msa0240460
chr2_2 mRNA 15424027 15429804 15424027 ID=Msa0240460-mRNA-1;Parent=Msa0240460;Name=Msa0240460-mRNA-1;_AED=0.06;_eAED=0.06;_QI=232|1|1|1|1|1|9|519|740
chr2_2 exon 15424027 15424715 15424027 ID=Msa0240460-mRNA-1:exon:6456;Parent=Msa0240460-mRNA-1
chr2_2 exon 15425463 15425895 15425463 ID=Msa0240460-mRNA-1:exon:6455;Parent=Msa0240460-mRNA-1
chr2_2 exon 15426216 15426471 15426216 ID=Msa0240460-mRNA-1:exon:6454;Parent=Msa0240460-mRNA-1
chr2_2 exon 15426642 15426909 15426642 ID=Msa0240460-mRNA-1:exon:6453;Parent=Msa0240460-mRNA-1
chr2_2 exon 15426999 15427326 15426999 ID=Msa0240460-mRNA-1:exon:6452;Parent=Msa0240460-mRNA-1
chr2_2 exon 15427489 15427723 15427489 ID=Msa0240460-mRNA-1:exon:6451;Parent=Msa0240460-mRNA-1
chr2_2 exon 15428518 15428712 15428518 ID=Msa0240460-mRNA-1:exon:6450;Parent=Msa0240460-mRNA-1
chr2_2 exon 15428996 15429089 15428996 ID=Msa0240460-mRNA-1:exon:6449;Parent=Msa0240460-mRNA-1
chr2_2 exon 15429329 15429804 15429329 ID=Msa0240460-mRNA-1:exon:6448;Parent=Msa0240460-mRNA-1
chr2_2 five_prime_UTR 15429573 15429804 15429573 ID=Msa0240460-mRNA-1:five_prime_utr;Parent=Msa0240460-mRNA-1
chr2_2 CDS 15429329 15429572 15429329 ID=Msa0240460-mRNA-1:cds;Parent=Msa0240460-mRNA-1
chr2_2 CDS 15428996 15429089 15428996 ID=Msa0240460-mRNA-1:cds;Parent=Msa0240460-mRNA-1
chr2_2 CDS 15428518 15428712 15428518 ID=Msa0240460-mRNA-1:cds;Parent=Msa0240460-mRNA-1
chr2_2 CDS 15427489 15427723 15427489 ID=Msa0240460-mRNA-1:cds;Parent=Msa0240460-mRNA-1
chr2_2 CDS 15426999 15427326 15426999 ID=Msa0240460-mRNA-1:cds;Parent=Msa0240460-mRNA-1
chr2_2 CDS 15426642 15426909 15426642 ID=Msa0240460-mRNA-1:cds;Parent=Msa0240460-mRNA-1
chr2_2 CDS 15426216 15426471 15426216 ID=Msa0240460-mRNA-1:cds;Parent=Msa0240460-mRNA-1
chr2_2 CDS 15425463 15425895 15425463 ID=Msa0240460-mRNA-1:cds;Parent=Msa0240460-mRNA-1
chr2_2 CDS 15424546 15424715 15424546 ID=Msa0240460-mRNA-1:cds;Parent=Msa0240460-mRNA-1
chr2_2 three_prime_UTR 15424027 15424545 15424027 ID=Msa0240460-mRNA-1:three_prime_utr;Parent=Msa0240460-mRNA-1
Gene Sequence

>Msa0240460

ATGGAGAAAAATTCTGTTGATTATAGTCCTTTGCTTTCTAAGAAAGGTGATGAAACTGATGGTTATGTTAAAAAAAATTCACCTAATTTTGTTGTGTCAGCTACTAAATGGACTCTTAGGACTTTGATTTCCATAATCTTCATTATATGGGCTGCTTTCATTTTTCTGTTACCATCAGAATCTGTGCATGGATTGTTCACAAAATGGCTTAATTTCAGCAGTGGAACTTCCTTTGGAATCACAGGAAGCATTTTACTGATTCTCAGTGCTCCTGTTCTTGCAATTGCATTTCTTGCCATTGCATACCTAATTATTTCTGGGGAGGATCAGCTTCCTGAGAAGAAGACTTCCAAGTATCCAAGATTTCGCCTATGGACTTTTCCGATCCTTATCAATGGACCATTTGGGGTTGTTTCTGCAACAGAGCTCATTGGAATTGTCATTTTTTTGGCATATGTTATTTGGGCTTTCTATGCTTATACTATGCAGGCTCTTGCAGCTATGTCTTATCAGTTATCATTTAGAGCCAAGAGCTTGCACATGTTGGAAATTTTGGGACTCCGTTCGGGCGGGATTGGATTAATGTGCTTGGCGTTTTTATTTATACCGATTTCAAGGGGATCTGTTCTTCTCCGCTTCATAGATATCCCTTTCGAACATGCTGCAAAATATCATGTATGGCTAGGACACCTCACAATGGTGATTTTTACTCTCCATGGACTCTTCTATGTTATTGAGTGGCTAATGGAAGGTCACCTAATTCAAGAATTATTAGAATGGAAAGATATTGGTGTTGCCAATCTAGCAGGAGTTATCAGCCTTGTAGCTGGTTTGTTGATGTGGGTGACCTCGCTTCCTGGAGTGCGAACGTGGAATTTTGAGCTGTTTTTCTACACTCACCAATTATACATAATCTTTATTGTGTTCATGGCTTTGCATATTGGCGACTTTATTTTTGCTATGGCTGCTGGACCAATATTTCTTTTTATGCTTGATCGATTTCTGAGGTTCTGCCAATCAAGAAGGACAGTAAATGTAATCTCATCGAGGTGCCTTCCTTGTGGCACTGTGGAAATGGTTCTGTCAAAACCACAAAATTTGAGATACAATGCCCTAAGCTTCATTTTCCTTCAAGTTCGGGAATTATCGTGGCTTCAGTGGCATCCATTCAGTGTTTCTTCTAGCCCTTTAGATGGAAAAAATCACATTGCTGTTCTCATTAAGGTTCTTGGCAAATGGACCGGGGGGTTAAGAGAAAGAATCACTGAAGGTGATGCAACAGAAAATTTATCTGTTCAGCCTCATACGGTGGTAACAGCTTCGGTTGAGGGGCCATATGGACACGAAGTACCATATCACTTGATGTACGAAAACCTTATATTAGTGGCAGGCGGTATTGGACTTTCGCCTTTCCTTGCTATATTGAGCGATATTCTCCATCGTGTGAGGGATGGGAAACCTTGTCGACCAAGAAATATTTTAATTGTTTGGGCAGTGAAAAAGTCAAATGAGCTTCCACTTCTTTCGACCGTTGACATGGAAACAATCTGTCCACGCTTTTCTGATAAAGTAAATATCAATGTACATATCTTCGTCACTCGGGAATCAGATCCTCCATTGGAAGAGGGATACAATTACAAACCAATAAAATCACTCTGTCCCTTTCCTATGCCTAGTGATTATGGAATGTCTGGTTTGGTTGGTACAGGAAACAATTTCTGGTCTGGACTATATGTCATTTCATCTACCTTAGGCTTTGTGATCTTACTTGCTTTGTTGAATATTTACTATATAAATCCAGTTGGATTGGTTATATGGTGGTACAAAGGGCTACTACTTGTAGTCTGCATGGTTGCAGGTGTAGTTATCTTCGGTGGTATAGTGGTTGGATTTTGGCATATGTGGGAAAAGCAAAGTTCTCTAAAGGATAAGTCCAATAACATCAAGGTTGATAAAATTGAGCAAAATGGCTCTGTGGATCACAAGGATCTAAGTCAATACAATATTGCAAAGTTAACTACCATACAGTATGGCTCTAGGCCAGACTTTAAAGAGATTTTTGAATCCATGTCAGAGAAATGGGGCCATGTTGATGTTGGTATTCTAGTTTGTGGTCCTCCAACTCTTCAGTCAAGTGTTGCACAAGAAATCAGGTCACATAGTTTAACAAGAGAACCTTATCACCCCATCTTCCATTTCCACAGTCATAGCTTTGATCTCTAG
Protein sequence

>Msa0240460

MEKNSVDYSPLLSKKGDETDGYVKKNSPNFVVSATKWTLRTLISIIFIIWAAFIFLLPSESVHGLFTKWLNFSSGTSFGITGSILLILSAPVLAIAFLAIAYLIISGEDQLPEKKTSKYPRFRLWTFPILINGPFGVVSATELIGIVIFLAYVIWAFYAYTMQALAAMSYQLSFRAKSLHMLEILGLRSGGIGLMCLAFLFIPISRGSVLLRFIDIPFEHAAKYHVWLGHLTMVIFTLHGLFYVIEWLMEGHLIQELLEWKDIGVANLAGVISLVAGLLMWVTSLPGVRTWNFELFFYTHQLYIIFIVFMALHIGDFIFAMAAGPIFLFMLDRFLRFCQSRRTVNVISSRCLPCGTVEMVLSKPQNLRYNALSFIFLQVRELSWLQWHPFSVSSSPLDGKNHIAVLIKVLGKWTGGLRERITEGDATENLSVQPHTVVTASVEGPYGHEVPYHLMYENLILVAGGIGLSPFLAILSDILHRVRDGKPCRPRNILIVWAVKKSNELPLLSTVDMETICPRFSDKVNINVHIFVTRESDPPLEEGYNYKPIKSLCPFPMPSDYGMSGLVGTGNNFWSGLYVISSTLGFVILLALLNIYYINPVGLVIWWYKGLLLVVCMVAGVVIFGGIVVGFWHMWEKQSSLKDKSNNIKVDKIEQNGSVDHKDLSQYNIAKLTTIQYGSRPDFKEIFESMSEKWGHVDVGILVCGPPTLQSSVAQEIRSHSLTREPYHPIFHFHSHSFDL*