Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1181660 | sp|P82787|DEF19_ARATH | 50.000 | 74 | 34 | 1 | 9 | 79 | 5 | 78 | 1.03e-17 | 75.1 |
| Msa1181660 | sp|P82787|DEF19_ARATH | 54.717 | 53 | 24 | 0 | 84 | 136 | 26 | 78 | 3.07e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1181660 | I3SZ44 | 93.382 | 136 | 9 | 0 | 1 | 136 | 1 | 136 | 4.53e-87 | 259 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004590 | Msa1181660 | 0.819359 | 1.210548e-52 | -8.615850e-47 |
| Msa0010150 | Msa1181660 | 0.829079 | 6.291743e-55 | -8.615850e-47 |
| Msa0048950 | Msa1181660 | 0.817843 | 2.672097e-52 | -8.615850e-47 |
| Msa0057860 | Msa1181660 | 0.815807 | 7.650423e-52 | -8.615850e-47 |
| Msa0059880 | Msa1181660 | 0.837923 | 3.903148e-57 | -8.615850e-47 |
| Msa0102920 | Msa1181660 | 0.809777 | 1.600172e-50 | -8.615850e-47 |
| Msa0603950 | Msa1181660 | 0.800734 | 1.254442e-48 | -8.615850e-47 |
| Msa0610190 | Msa1181660 | 0.804973 | 1.670076e-49 | -8.615850e-47 |
| Msa0631700 | Msa1181660 | 0.814295 | 1.657070e-51 | -8.615850e-47 |
| Msa0643190 | Msa1181660 | 0.831247 | 1.860354e-55 | -8.615850e-47 |
| Msa0670360 | Msa1181660 | 0.825585 | 4.327078e-54 | -8.615850e-47 |
| Msa0735340 | Msa1181660 | 0.805564 | 1.256127e-49 | -8.615850e-47 |
| Msa0751960 | Msa1181660 | 0.803619 | 3.196898e-49 | -8.615850e-47 |
| Msa0768670 | Msa1181660 | 0.803452 | 3.463543e-49 | -8.615850e-47 |
| Msa0777070 | Msa1181660 | 0.830852 | 2.325782e-55 | -8.615850e-47 |
| Msa0777250 | Msa1181660 | 0.812579 | 3.949713e-51 | -8.615850e-47 |
| Msa0814160 | Msa1181660 | 0.829733 | 4.364506e-55 | -8.615850e-47 |
| Msa0814230 | Msa1181660 | 0.819748 | 9.868099e-53 | -8.615850e-47 |
| Msa0143150 | Msa1181660 | 0.807682 | 4.485652e-50 | -8.615850e-47 |
| Msa0147680 | Msa1181660 | 0.830913 | 2.246694e-55 | -8.615850e-47 |
| Msa0150910 | Msa1181660 | 0.832464 | 9.315825e-56 | -8.615850e-47 |
| Msa0150920 | Msa1181660 | 0.825346 | 4.927771e-54 | -8.615850e-47 |
| Msa0160580 | Msa1181660 | 0.809279 | 2.046930e-50 | -8.615850e-47 |
| Msa0190670 | Msa1181660 | 0.816705 | 4.819475e-52 | -8.615850e-47 |
| Msa0194230 | Msa1181660 | 0.806828 | 6.806835e-50 | -8.615850e-47 |
| Msa0207640 | Msa1181660 | 0.806589 | 7.644308e-50 | -8.615850e-47 |
| Msa0210850 | Msa1181660 | 0.801759 | 7.737619e-49 | -8.615850e-47 |
| Msa0212550 | Msa1181660 | 0.812553 | 4.000524e-51 | -8.615850e-47 |
| Msa0366510 | Msa1181660 | 0.822974 | 1.777285e-53 | -8.615850e-47 |
| Msa0391600 | Msa1181660 | 0.802612 | 5.165260e-49 | -8.615850e-47 |
| Msa0393820 | Msa1181660 | 0.806053 | 9.917004e-50 | -8.615850e-47 |
| Msa0396870 | Msa1181660 | 0.822758 | 1.996197e-53 | -8.615850e-47 |
| Msa0414480 | Msa1181660 | 0.805074 | 1.590899e-49 | -8.615850e-47 |
| Msa0464310 | Msa1181660 | 0.809710 | 1.654106e-50 | -8.615850e-47 |
| Msa0472390 | Msa1181660 | 0.802338 | 5.882841e-49 | -8.615850e-47 |
| Msa0985700 | Msa1181660 | 0.808290 | 3.330354e-50 | -8.615850e-47 |
| Msa0987640 | Msa1181660 | 0.810901 | 9.155496e-51 | -8.615850e-47 |
| Msa1006030 | Msa1181660 | 0.800291 | 1.544395e-48 | -8.615850e-47 |
| Msa1006170 | Msa1181660 | 0.808492 | 3.015909e-50 | -8.615850e-47 |
| Msa1021620 | Msa1181660 | 0.806592 | 7.631618e-50 | -8.615850e-47 |
| Msa1024350 | Msa1181660 | 0.831753 | 1.396296e-55 | -8.615850e-47 |
| Msa1061670 | Msa1181660 | 0.816334 | 5.833564e-52 | -8.615850e-47 |
| Msa1064930 | Msa1181660 | 0.811211 | 7.841181e-51 | -8.615850e-47 |
| Msa1064940 | Msa1181660 | 0.834216 | 3.407273e-56 | -8.615850e-47 |
| Msa1087370 | Msa1181660 | 0.816534 | 5.263873e-52 | -8.615850e-47 |
| Msa1087380 | Msa1181660 | 0.814525 | 1.473872e-51 | -8.615850e-47 |
| Msa1098100 | Msa1181660 | 0.800819 | 1.205180e-48 | -8.615850e-47 |
| Msa1103450 | Msa1181660 | 0.800973 | 1.120915e-48 | -8.615850e-47 |
| Msa1106960 | Msa1181660 | 0.811127 | 8.179001e-51 | -8.615850e-47 |
| Msa0272210 | Msa1181660 | 0.801356 | 9.358764e-49 | -8.615850e-47 |
| Msa0274250 | Msa1181660 | 0.819263 | 1.273324e-52 | -8.615850e-47 |
| Msa0274260 | Msa1181660 | 0.831298 | 1.807160e-55 | -8.615850e-47 |
| Msa0314440 | Msa1181660 | 0.804127 | 2.507784e-49 | -8.615850e-47 |
| Msa0326770 | Msa1181660 | 0.801293 | 9.638968e-49 | -8.615850e-47 |
| Msa0346170 | Msa1181660 | 0.818628 | 1.774787e-52 | -8.615850e-47 |
| Msa0347320 | Msa1181660 | 0.805029 | 1.626070e-49 | -8.615850e-47 |
| Msa1109890 | Msa1181660 | 0.810408 | 1.170250e-50 | -8.615850e-47 |
| Msa1138110 | Msa1181660 | 0.807219 | 5.625050e-50 | -8.615850e-47 |
| Msa1148210 | Msa1181660 | 0.801130 | 1.041258e-48 | -8.615850e-47 |
| Msa1181660 | Msa1214960 | 0.819371 | 1.202832e-52 | -8.615850e-47 |
| Msa1181660 | Msa1262650 | 0.803799 | 2.933416e-49 | -8.615850e-47 |
| Msa1181660 | Msa1269050 | 0.807963 | 3.910686e-50 | -8.615850e-47 |
| Msa1181660 | Msa1309390 | 0.823244 | 1.537166e-53 | -8.615850e-47 |
| Msa1181660 | Msa1323030 | 0.828479 | 8.788188e-55 | -8.615850e-47 |
| Msa1181660 | Msa1323160 | 0.801916 | 7.182521e-49 | -8.615850e-47 |
| Msa1181660 | Msa1343590 | 0.820499 | 6.641219e-53 | -8.615850e-47 |
| Msa1181660 | Msa1349420 | 0.805235 | 1.472323e-49 | -8.615850e-47 |
| Msa1181660 | Msa1373560 | 0.820188 | 7.828503e-53 | -8.615850e-47 |
| Msa1181660 | Msa1386120 | 0.808600 | 2.860170e-50 | -8.615850e-47 |
| Msa1181660 | Msa1411550 | 0.802630 | 5.122423e-49 | -8.615850e-47 |
| Msa1181660 | Msa1427670 | 0.808512 | 2.986110e-50 | -8.615850e-47 |
| Msa1181660 | Msa1445900 | 0.818204 | 2.214407e-52 | -8.615850e-47 |
| Msa1181660 | Msa1449770 | 0.803672 | 3.117381e-49 | -8.615850e-47 |
| Msa1181660 | Msa1459610 | 0.822909 | 1.840536e-53 | -8.615850e-47 |
| Msa0515130 | Msa1181660 | 0.818156 | 2.270397e-52 | -8.615850e-47 |
| Msa0515150 | Msa1181660 | 0.815272 | 1.006644e-51 | -8.615850e-47 |
| Msa0535570 | Msa1181660 | 0.827856 | 1.241533e-54 | -8.615850e-47 |
| Msa0591490 | Msa1181660 | 0.828540 | 8.494686e-55 | -8.615850e-47 |
| Msa0594330 | Msa1181660 | 0.821727 | 3.461265e-53 | -8.615850e-47 |
| Msa0602050 | Msa1181660 | 0.830740 | 2.476622e-55 | -8.615850e-47 |
| Msa0854840 | Msa1181660 | 0.843496 | 1.352262e-58 | -8.615850e-47 |
| Msa0861730 | Msa1181660 | 0.804742 | 1.867035e-49 | -8.615850e-47 |
| Msa0883640 | Msa1181660 | 0.808058 | 3.732653e-50 | -8.615850e-47 |
| Msa0893840 | Msa1181660 | 0.812533 | 4.041362e-51 | -8.615850e-47 |
| Msa0896920 | Msa1181660 | 0.801321 | 9.515698e-49 | -8.615850e-47 |
| Msa0902340 | Msa1181660 | 0.833147 | 6.302590e-56 | -8.615850e-47 |
| Msa0910830 | Msa1181660 | 0.821172 | 4.650658e-53 | -8.615850e-47 |
| Msa0913550 | Msa1181660 | 0.810568 | 1.080295e-50 | -8.615850e-47 |
| Msa0932930 | Msa1181660 | 0.810776 | 9.741612e-51 | -8.615850e-47 |
| Msa0951150 | Msa1181660 | 0.809390 | 1.937461e-50 | -8.615850e-47 |
| Msa0960090 | Msa1181660 | 0.809346 | 1.980216e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1181660 | MtrunA17_Chr8g0339681 | 93.382 | 136 | 9 | 0 | 1 | 136 | 1 | 136 | 8.73e-91 | 259 |
| Msa1181660 | MtrunA17_Chr8g0339701 | 88.608 | 79 | 9 | 0 | 1 | 79 | 1 | 79 | 1.77e-48 | 150 |
| Msa1181660 | MtrunA17_Chr8g0339701 | 63.235 | 68 | 25 | 0 | 69 | 136 | 12 | 79 | 3.22e-26 | 94.0 |
| Msa1181660 | MtrunA17_Chr8g0339721 | 68.354 | 79 | 25 | 0 | 1 | 79 | 1 | 79 | 6.85e-28 | 98.2 |
| Msa1181660 | MtrunA17_Chr8g0339721 | 64.815 | 54 | 19 | 0 | 83 | 136 | 26 | 79 | 2.79e-21 | 81.6 |
| Msa1181660 | MtrunA17_Chr8g0339691 | 82.353 | 51 | 9 | 0 | 27 | 77 | 1 | 51 | 1.34e-26 | 95.5 |
| Msa1181660 | MtrunA17_Chr8g0339691 | 74.510 | 51 | 13 | 0 | 84 | 134 | 1 | 51 | 3.28e-23 | 87.0 |
| Msa1181660 | MtrunA17_Chr8g0339741 | 55.000 | 80 | 35 | 1 | 1 | 79 | 1 | 80 | 8.77e-24 | 87.8 |
| Msa1181660 | MtrunA17_Chr8g0339741 | 52.727 | 55 | 25 | 1 | 83 | 136 | 26 | 80 | 6.59e-14 | 62.8 |
| Msa1181660 | MtrunA17_Chr8g0339711 | 53.750 | 80 | 35 | 2 | 1 | 79 | 1 | 79 | 1.96e-20 | 79.3 |
| Msa1181660 | MtrunA17_Chr8g0339711 | 60.000 | 55 | 21 | 1 | 83 | 136 | 25 | 79 | 4.94e-16 | 68.2 |
| Msa1181660 | MtrunA17_Chr3g0084701 | 51.899 | 79 | 36 | 1 | 1 | 79 | 1 | 77 | 2.04e-19 | 76.6 |
| Msa1181660 | MtrunA17_Chr8g0339651 | 49.367 | 79 | 35 | 3 | 4 | 79 | 13 | 89 | 2.42e-18 | 74.3 |
| Msa1181660 | MtrunA17_Chr8g0339751 | 58.228 | 79 | 32 | 1 | 1 | 79 | 1 | 78 | 2.62e-18 | 73.9 |
| Msa1181660 | MtrunA17_Chr8g0339751 | 59.649 | 57 | 22 | 1 | 80 | 136 | 23 | 78 | 1.46e-16 | 69.3 |
| Msa1181660 | MtrunA17_Chr8g0345161 | 51.948 | 77 | 33 | 2 | 3 | 79 | 4 | 76 | 2.98e-17 | 71.2 |
| Msa1181660 | MtrunA17_Chr8g0357271 | 51.852 | 81 | 34 | 4 | 1 | 79 | 1 | 78 | 3.12e-16 | 68.6 |
| Msa1181660 | MtrunA17_Chr7g0260561 | 43.902 | 82 | 40 | 4 | 1 | 79 | 1 | 79 | 4.72e-16 | 68.2 |
| Msa1181660 | MtrunA17_Chr8g0339571 | 48.101 | 79 | 38 | 2 | 1 | 79 | 9 | 84 | 1.26e-13 | 62.0 |
| Msa1181660 | MtrunA17_Chr8g0339481 | 45.000 | 80 | 43 | 1 | 1 | 79 | 1 | 80 | 5.68e-13 | 60.1 |
| Msa1181660 | MtrunA17_Chr8g0339501 | 33.607 | 122 | 61 | 3 | 1 | 121 | 1 | 103 | 5.96e-13 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1181660 | AT1G19610.1 | 50.000 | 74 | 34 | 1 | 9 | 79 | 5 | 78 | 1.05e-18 | 75.1 |
| Msa1181660 | AT1G19610.1 | 54.717 | 53 | 24 | 0 | 84 | 136 | 26 | 78 | 3.12e-12 | 58.5 |
| Msa1181660 | AT2G26020.1 | 41.772 | 79 | 41 | 1 | 6 | 79 | 2 | 80 | 5.09e-12 | 58.2 |
| Msa1181660 | AT5G44420.1 | 39.241 | 79 | 43 | 1 | 6 | 79 | 2 | 80 | 7.05e-11 | 55.1 |
Find 24 sgRNAs with CRISPR-Local
Find 39 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGTCTTTCACAAAGTTT+TGG | 0.275703 | 8_1:+16112160 | None:intergenic |
| GCTTGTCATCGTCAAGGCTT+TGG | 0.378692 | 8_1:-16112444 | Msa1181660:CDS |
| TGCTTGTCACCGTCAAGGCT+TGG | 0.420072 | 8_1:-16112059 | Msa1181660:CDS |
| ATGCAATACCCAAGCCTTGA+CGG | 0.445877 | 8_1:+16112050 | None:intergenic |
| GCTTGTCACCGTCAAGGCTT+GGG | 0.447874 | 8_1:-16112058 | Msa1181660:CDS |
| AATGTGGAGCATGCTACTTT+TGG | 0.453095 | 8_1:-16112468 | Msa1181660:CDS |
| AAGCGAAGTAAAACATGGTC+AGG | 0.480655 | 8_1:-16112531 | Msa1181660:CDS |
| AGACGAAGCAAAACATGGTC+AGG | 0.500469 | 8_1:-16112145 | Msa1181660:CDS |
| AATGTGGAGCATGCAACTTC+TGG | 0.503666 | 8_1:-16112082 | Msa1181660:CDS |
| CAGTTTCCTGTGTTAAGACA+AGG | 0.529102 | 8_1:+16112507 | None:intergenic |
| GTTGTAGAATTTACTAGCAG+AGG | 0.536081 | 8_1:+16112730 | None:intergenic |
| TGATTAATTTGTACCACATG+TGG | 0.540054 | 8_1:+16112670 | None:intergenic |
| TTTGGTGCTTGTCATCGTCA+AGG | 0.545774 | 8_1:-16112450 | Msa1181660:CDS |
| ACATGTGGAAATCAAGAGAA+AGG | 0.550595 | 8_1:+16112685 | None:intergenic |
| TCTGGTGCTTGTCACCGTCA+AGG | 0.563470 | 8_1:-16112064 | Msa1181660:CDS |
| TTTCTCTTGATTTCCACATG+TGG | 0.580296 | 8_1:-16112683 | Msa1181660:intron |
| TAAAAGACAATGCATTAATG+TGG | 0.585322 | 8_1:-16112484 | Msa1181660:CDS |
| CAATGTCCTGAGTTAAGACA+AGG | 0.599143 | 8_1:+16112121 | None:intergenic |
| GTGAAAGACGAAGCAAAACA+TGG | 0.629517 | 8_1:-16112150 | Msa1181660:CDS |
| TCAGGACCTTGTCTTAACTC+AGG | 0.650744 | 8_1:-16112127 | Msa1181660:CDS |
| TAAAAGACAGTGCATCAATG+TGG | 0.668011 | 8_1:-16112098 | Msa1181660:CDS |
| GTCAAAAGCGAAGTAAAACA+TGG | 0.672829 | 8_1:-16112536 | Msa1181660:CDS |
| TGGAAATCAAGAGAAAGGCA+AGG | 0.676802 | 8_1:+16112690 | None:intergenic |
| TCAGGACCTTGTCTTAACAC+AGG | 0.703356 | 8_1:-16112513 | Msa1181660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGAGAAATTATTAATAT+AGG | + | chr8_1:16112125-16112144 | None:intergenic | 10.0% |
| !! | AACAATAAAGCAAATTAATT+AGG | + | chr8_1:16112167-16112186 | None:intergenic | 15.0% |
| !!! | TAATTGTTATATTATGGTTT+TGG | + | chr8_1:16112425-16112444 | None:intergenic | 15.0% |
| !!! | GCATTTTAATTGTTATATTA+TGG | + | chr8_1:16112431-16112450 | None:intergenic | 15.0% |
| !! | AAATGAACAATTATTAACAT+AGG | + | chr8_1:16112519-16112538 | None:intergenic | 15.0% |
| !! | AAATTAAGAACACAAAAATA+TGG | + | chr8_1:16112548-16112567 | None:intergenic | 15.0% |
| !!! | TTTTTTCTTTTTATATGTAG+AGG | - | chr8_1:16112576-16112595 | Msa1181660:intron | 15.0% |
| !! | ATTAATTAGGAACATAGATA+AGG | + | chr8_1:16112154-16112173 | None:intergenic | 20.0% |
| ! | TAAAAGACAATGCATTAATG+TGG | - | chr8_1:16112280-16112299 | Msa1181660:intron | 25.0% |
| ! | AATGTTAACGATATACTCTT+TGG | + | chr8_1:16112377-16112396 | None:intergenic | 25.0% |
| !! | TTTCTTTTTATATGTAGAGG+TGG | - | chr8_1:16112579-16112598 | Msa1181660:intron | 25.0% |
| !! | TGATTAATTTGTACCACATG+TGG | + | chr8_1:16112097-16112116 | None:intergenic | 30.0% |
| GTTGTAGAATTTACTAGCAG+AGG | + | chr8_1:16112037-16112056 | None:intergenic | 35.0% | |
| ACATGTGGAAATCAAGAGAA+AGG | + | chr8_1:16112082-16112101 | None:intergenic | 35.0% | |
| TTTCTCTTGATTTCCACATG+TGG | - | chr8_1:16112081-16112100 | Msa1181660:CDS | 35.0% | |
| TTCTTGCTTTCTATGTGTAG+AGG | - | chr8_1:16112190-16112209 | Msa1181660:intron | 35.0% | |
| GTCAAAAGCGAAGTAAAACA+TGG | - | chr8_1:16112228-16112247 | Msa1181660:intron | 35.0% | |
| TTATTTGCACCACATGTATC+TGG | + | chr8_1:16112488-16112507 | None:intergenic | 35.0% | |
| ! | CTTCGTCTTTCACAAAGTTT+TGG | + | chr8_1:16112607-16112626 | None:intergenic | 35.0% |
| TAAAAGACAGTGCATCAATG+TGG | - | chr8_1:16112666-16112685 | Msa1181660:intron | 35.0% | |
| TGGAAATCAAGAGAAAGGCA+AGG | + | chr8_1:16112077-16112096 | None:intergenic | 40.0% | |
| TTGCTTTCTATGTGTAGAGG+TGG | - | chr8_1:16112193-16112212 | Msa1181660:intron | 40.0% | |
| AAGCGAAGTAAAACATGGTC+AGG | - | chr8_1:16112233-16112252 | Msa1181660:intron | 40.0% | |
| CAGTTTCCTGTGTTAAGACA+AGG | + | chr8_1:16112260-16112279 | None:intergenic | 40.0% | |
| !!! | AATGTGGAGCATGCTACTTT+TGG | - | chr8_1:16112296-16112315 | Msa1181660:intron | 40.0% |
| GTGAAAGACGAAGCAAAACA+TGG | - | chr8_1:16112614-16112633 | Msa1181660:intron | 40.0% | |
| CAATGTCCTGAGTTAAGACA+AGG | + | chr8_1:16112646-16112665 | None:intergenic | 40.0% | |
| TCAGGACCTTGTCTTAACAC+AGG | - | chr8_1:16112251-16112270 | Msa1181660:intron | 45.0% | |
| !! | TTTGGTGCTTGTCATCGTCA+AGG | - | chr8_1:16112314-16112333 | Msa1181660:intron | 45.0% |
| ATGTCACCTCCAGATACATG+TGG | - | chr8_1:16112476-16112495 | Msa1181660:CDS | 45.0% | |
| TTTGCACCACATGTATCTGG+AGG | + | chr8_1:16112485-16112504 | None:intergenic | 45.0% | |
| AGACGAAGCAAAACATGGTC+AGG | - | chr8_1:16112619-16112638 | Msa1181660:intron | 45.0% | |
| TCAGGACCTTGTCTTAACTC+AGG | - | chr8_1:16112637-16112656 | Msa1181660:intron | 45.0% | |
| AATGTGGAGCATGCAACTTC+TGG | - | chr8_1:16112682-16112701 | Msa1181660:intron | 45.0% | |
| ATGCAATACCCAAGCCTTGA+CGG | + | chr8_1:16112717-16112736 | None:intergenic | 45.0% | |
| GCTTGTCATCGTCAAGGCTT+TGG | - | chr8_1:16112320-16112339 | Msa1181660:intron | 50.0% | |
| TCTGGTGCTTGTCACCGTCA+AGG | - | chr8_1:16112700-16112719 | Msa1181660:CDS | 55.0% | |
| TGCTTGTCACCGTCAAGGCT+TGG | - | chr8_1:16112705-16112724 | Msa1181660:CDS | 55.0% | |
| GCTTGTCACCGTCAAGGCTT+GGG | - | chr8_1:16112706-16112725 | Msa1181660:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 16112027 | 16112759 | 16112027 | ID=Msa1181660;Name=Msa1181660 |
| chr8_1 | mRNA | 16112027 | 16112759 | 16112027 | ID=Msa1181660-mRNA-1;Parent=Msa1181660;Name=Msa1181660-mRNA-1;_AED=0.43;_eAED=0.43;_QI=0|0|0|1|1|1|3|0|136 |
| chr8_1 | exon | 16112684 | 16112759 | 16112684 | ID=Msa1181660-mRNA-1:exon:6065;Parent=Msa1181660-mRNA-1 |
| chr8_1 | exon | 16112406 | 16112576 | 16112406 | ID=Msa1181660-mRNA-1:exon:6064;Parent=Msa1181660-mRNA-1 |
| chr8_1 | exon | 16112027 | 16112190 | 16112027 | ID=Msa1181660-mRNA-1:exon:6063;Parent=Msa1181660-mRNA-1 |
| chr8_1 | CDS | 16112684 | 16112759 | 16112684 | ID=Msa1181660-mRNA-1:cds;Parent=Msa1181660-mRNA-1 |
| chr8_1 | CDS | 16112406 | 16112576 | 16112406 | ID=Msa1181660-mRNA-1:cds;Parent=Msa1181660-mRNA-1 |
| chr8_1 | CDS | 16112027 | 16112190 | 16112027 | ID=Msa1181660-mRNA-1:cds;Parent=Msa1181660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
