Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209080 | XP_024632301.1 | 99.359 | 156 | 1 | 0 | 1 | 156 | 1 | 156 | 1.28e-111 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209080 | sp|P49592|NC2B_ARATH | 79.870 | 154 | 29 | 1 | 1 | 152 | 1 | 154 | 3.75e-88 | 257 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209080 | I3S9B6 | 99.359 | 156 | 1 | 0 | 1 | 156 | 1 | 156 | 6.11e-112 | 323 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0209080 | TF | NF-YB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0209080 | 0.815751 | 7.875693e-52 | -8.615850e-47 |
| Msa0008200 | Msa0209080 | 0.808551 | 2.929467e-50 | -8.615850e-47 |
| Msa0008840 | Msa0209080 | 0.810037 | 1.406606e-50 | -8.615850e-47 |
| Msa0010490 | Msa0209080 | 0.838685 | 2.483560e-57 | -8.615850e-47 |
| Msa0010500 | Msa0209080 | 0.839446 | 1.577019e-57 | -8.615850e-47 |
| Msa0017320 | Msa0209080 | 0.838666 | 2.510690e-57 | -8.615850e-47 |
| Msa0020390 | Msa0209080 | 0.854554 | 1.139513e-61 | -8.615850e-47 |
| Msa0020410 | Msa0209080 | 0.825315 | 5.013603e-54 | -8.615850e-47 |
| Msa0029260 | Msa0209080 | 0.843640 | 1.237666e-58 | -8.615850e-47 |
| Msa0030300 | Msa0209080 | 0.827278 | 1.708812e-54 | -8.615850e-47 |
| Msa0032470 | Msa0209080 | 0.801260 | 9.791269e-49 | -8.615850e-47 |
| Msa0033880 | Msa0209080 | 0.822548 | 2.233926e-53 | -8.615850e-47 |
| Msa0036540 | Msa0209080 | 0.824064 | 9.882259e-54 | -8.615850e-47 |
| Msa0038870 | Msa0209080 | 0.821857 | 3.229775e-53 | -8.615850e-47 |
| Msa0043860 | Msa0209080 | 0.820879 | 5.432094e-53 | -8.615850e-47 |
| Msa0049390 | Msa0209080 | 0.809957 | 1.463536e-50 | -8.615850e-47 |
| Msa0051740 | Msa0209080 | 0.802631 | 5.120149e-49 | -8.615850e-47 |
| Msa0055100 | Msa0209080 | 0.820089 | 8.245653e-53 | -8.615850e-47 |
| Msa0055150 | Msa0209080 | 0.817549 | 3.113440e-52 | -8.615850e-47 |
| Msa0057750 | Msa0209080 | 0.815642 | 8.328463e-52 | -8.615850e-47 |
| Msa0059950 | Msa0209080 | 0.833667 | 4.675061e-56 | -8.615850e-47 |
| Msa0065650 | Msa0209080 | 0.825530 | 4.459081e-54 | -8.615850e-47 |
| Msa0068020 | Msa0209080 | 0.833651 | 4.718726e-56 | -8.615850e-47 |
| Msa0071250 | Msa0209080 | 0.823233 | 1.546840e-53 | -8.615850e-47 |
| Msa0074750 | Msa0209080 | 0.815291 | 9.969497e-52 | -8.615850e-47 |
| Msa0077900 | Msa0209080 | 0.815224 | 1.031592e-51 | -8.615850e-47 |
| Msa0080730 | Msa0209080 | 0.819302 | 1.247360e-52 | -8.615850e-47 |
| Msa0081650 | Msa0209080 | 0.816173 | 6.337173e-52 | -8.615850e-47 |
| Msa0086420 | Msa0209080 | 0.815318 | 9.829098e-52 | -8.615850e-47 |
| Msa0090550 | Msa0209080 | 0.825512 | 4.501320e-54 | -8.615850e-47 |
| Msa0093010 | Msa0209080 | 0.843908 | 1.049055e-58 | -8.615850e-47 |
| Msa0095360 | Msa0209080 | 0.800148 | 1.650940e-48 | -8.615850e-47 |
| Msa0095770 | Msa0209080 | 0.801313 | 9.550167e-49 | -8.615850e-47 |
| Msa0101180 | Msa0209080 | 0.808432 | 3.106884e-50 | -8.615850e-47 |
| Msa0103070 | Msa0209080 | 0.814623 | 1.402275e-51 | -8.615850e-47 |
| Msa0103790 | Msa0209080 | 0.850890 | 1.266871e-60 | -8.615850e-47 |
| Msa0104230 | Msa0209080 | 0.807476 | 4.962537e-50 | -8.615850e-47 |
| Msa0106620 | Msa0209080 | 0.802919 | 4.464152e-49 | -8.615850e-47 |
| Msa0106710 | Msa0209080 | 0.817772 | 2.773102e-52 | -8.615850e-47 |
| Msa0106850 | Msa0209080 | 0.804622 | 1.977767e-49 | -8.615850e-47 |
| Msa0111080 | Msa0209080 | 0.830887 | 2.279437e-55 | -8.615850e-47 |
| Msa0115190 | Msa0209080 | 0.812094 | 5.039486e-51 | -8.615850e-47 |
| Msa0118540 | Msa0209080 | 0.836748 | 7.802115e-57 | -8.615850e-47 |
| Msa0119900 | Msa0209080 | 0.816297 | 5.947050e-52 | -8.615850e-47 |
| Msa0121820 | Msa0209080 | 0.820046 | 8.433871e-53 | -8.615850e-47 |
| Msa0126880 | Msa0209080 | 0.824525 | 7.700264e-54 | -8.615850e-47 |
| Msa0127850 | Msa0209080 | 0.830458 | 2.903497e-55 | -8.615850e-47 |
| Msa0138020 | Msa0209080 | 0.812592 | 3.924206e-51 | -8.615850e-47 |
| Msa0140110 | Msa0209080 | 0.805913 | 1.061193e-49 | -8.615850e-47 |
| Msa0142500 | Msa0209080 | 0.807355 | 5.262837e-50 | -8.615850e-47 |
| Msa0144430 | Msa0209080 | 0.800037 | 1.738861e-48 | -8.615850e-47 |
| Msa0146080 | Msa0209080 | 0.816822 | 4.535798e-52 | -8.615850e-47 |
| Msa0150230 | Msa0209080 | 0.830252 | 3.261395e-55 | -8.615850e-47 |
| Msa0150260 | Msa0209080 | 0.839074 | 1.969187e-57 | -8.615850e-47 |
| Msa0154920 | Msa0209080 | 0.833279 | 5.841318e-56 | -8.615850e-47 |
| Msa0156700 | Msa0209080 | 0.803915 | 2.775267e-49 | -8.615850e-47 |
| Msa0159420 | Msa0209080 | 0.852724 | 3.825456e-61 | -8.615850e-47 |
| Msa0167980 | Msa0209080 | 0.853879 | 1.784485e-61 | -8.615850e-47 |
| Msa0169300 | Msa0209080 | 0.843336 | 1.491712e-58 | -8.615850e-47 |
| Msa0174000 | Msa0209080 | 0.814330 | 1.628019e-51 | -8.615850e-47 |
| Msa0174260 | Msa0209080 | 0.819950 | 8.874245e-53 | -8.615850e-47 |
| Msa0175200 | Msa0209080 | 0.816292 | 5.962499e-52 | -8.615850e-47 |
| Msa0175540 | Msa0209080 | 0.806849 | 6.735053e-50 | -8.615850e-47 |
| Msa0183850 | Msa0209080 | 0.810063 | 1.388884e-50 | -8.615850e-47 |
| Msa0183870 | Msa0209080 | 0.831841 | 1.327923e-55 | -8.615850e-47 |
| Msa0187490 | Msa0209080 | 0.849212 | 3.739030e-60 | -8.615850e-47 |
| Msa0189520 | Msa0209080 | 0.819795 | 9.625300e-53 | -8.615850e-47 |
| Msa0190120 | Msa0209080 | 0.826476 | 2.657082e-54 | -8.615850e-47 |
| Msa0190590 | Msa0209080 | 0.849882 | 2.431424e-60 | -8.615850e-47 |
| Msa0191070 | Msa0209080 | 0.815304 | 9.899051e-52 | -8.615850e-47 |
| Msa0196670 | Msa0209080 | 0.801027 | 1.092685e-48 | -8.615850e-47 |
| Msa0197610 | Msa0209080 | 0.832786 | 7.750334e-56 | -8.615850e-47 |
| Msa0207040 | Msa0209080 | -0.804676 | 1.926491e-49 | -8.615850e-47 |
| Msa0209080 | Msa0209500 | 0.833429 | 5.359814e-56 | -8.615850e-47 |
| Msa0209080 | Msa0219100 | 0.818874 | 1.561054e-52 | -8.615850e-47 |
| Msa0209080 | Msa0229360 | 0.812773 | 3.581522e-51 | -8.615850e-47 |
| Msa0209080 | Msa0231790 | 0.818090 | 2.349556e-52 | -8.615850e-47 |
| Msa0209080 | Msa0233370 | 0.837195 | 5.998206e-57 | -8.615850e-47 |
| Msa0209080 | Msa0237960 | 0.806281 | 8.876134e-50 | -8.615850e-47 |
| Msa0209080 | Msa0243090 | 0.803380 | 3.584000e-49 | -8.615850e-47 |
| Msa0209080 | Msa0244980 | 0.824210 | 9.131662e-54 | -8.615850e-47 |
| Msa0209080 | Msa0251770 | 0.805356 | 1.388954e-49 | -8.615850e-47 |
| Msa0209080 | Msa0257490 | 0.854215 | 1.427415e-61 | -8.615850e-47 |
| Msa0209080 | Msa0269470 | 0.852908 | 3.389580e-61 | -8.615850e-47 |
| Msa0209080 | Msa0271360 | 0.825262 | 5.159445e-54 | -8.615850e-47 |
| Msa0209080 | Msa0271890 | 0.810012 | 1.424023e-50 | -8.615850e-47 |
| Msa0209080 | Msa0275360 | 0.826203 | 3.086166e-54 | -8.615850e-47 |
| Msa0209080 | Msa0283420 | 0.819666 | 1.030331e-52 | -8.615850e-47 |
| Msa0209080 | Msa0284450 | 0.808506 | 2.995488e-50 | -8.615850e-47 |
| Msa0209080 | Msa0296790 | 0.849214 | 3.733000e-60 | -8.615850e-47 |
| Msa0209080 | Msa0296920 | 0.850560 | 1.568812e-60 | -8.615850e-47 |
| Msa0209080 | Msa0310860 | 0.807075 | 6.033584e-50 | -8.615850e-47 |
| Msa0209080 | Msa0311720 | 0.850258 | 1.907293e-60 | -8.615850e-47 |
| Msa0209080 | Msa0317960 | 0.801047 | 1.082689e-48 | -8.615850e-47 |
| Msa0209080 | Msa0320430 | 0.812607 | 3.894452e-51 | -8.615850e-47 |
| Msa0209080 | Msa0321690 | 0.815500 | 8.957170e-52 | -8.615850e-47 |
| Msa0209080 | Msa0324240 | 0.803438 | 3.486290e-49 | -8.615850e-47 |
| Msa0209080 | Msa0326750 | 0.819449 | 1.154533e-52 | -8.615850e-47 |
| Msa0209080 | Msa0339910 | 0.814097 | 1.832798e-51 | -8.615850e-47 |
| Msa0209080 | Msa0347750 | 0.807025 | 6.183537e-50 | -8.615850e-47 |
| Msa0209080 | Msa0365700 | 0.829200 | 5.880009e-55 | -8.615850e-47 |
| Msa0209080 | Msa0365860 | 0.812996 | 3.199564e-51 | -8.615850e-47 |
| Msa0209080 | Msa0370250 | 0.801340 | 9.429056e-49 | -8.615850e-47 |
| Msa0209080 | Msa0376910 | 0.810597 | 1.064980e-50 | -8.615850e-47 |
| Msa0209080 | Msa0378970 | 0.804424 | 2.174758e-49 | -8.615850e-47 |
| Msa0209080 | Msa0379570 | 0.804304 | 2.303243e-49 | -8.615850e-47 |
| Msa0209080 | Msa0380100 | 0.839298 | 1.722506e-57 | -8.615850e-47 |
| Msa0209080 | Msa0382370 | 0.817759 | 2.791310e-52 | -8.615850e-47 |
| Msa0209080 | Msa0384670 | 0.811301 | 7.498661e-51 | -8.615850e-47 |
| Msa0209080 | Msa0384880 | 0.824909 | 6.251310e-54 | -8.615850e-47 |
| Msa0209080 | Msa0385490 | 0.805022 | 1.631202e-49 | -8.615850e-47 |
| Msa0209080 | Msa0385500 | 0.845385 | 4.196829e-59 | -8.615850e-47 |
| Msa0209080 | Msa0386040 | 0.804676 | 1.926961e-49 | -8.615850e-47 |
| Msa0209080 | Msa0389210 | 0.825427 | 4.716518e-54 | -8.615850e-47 |
| Msa0209080 | Msa0394690 | 0.805911 | 1.061840e-49 | -8.615850e-47 |
| Msa0209080 | Msa0403770 | 0.851712 | 7.425426e-61 | -8.615850e-47 |
| Msa0209080 | Msa0415430 | 0.802032 | 6.799490e-49 | -8.615850e-47 |
| Msa0209080 | Msa0418400 | 0.805662 | 1.197842e-49 | -8.615850e-47 |
| Msa0209080 | Msa0427580 | 0.828272 | 9.859641e-55 | -8.615850e-47 |
| Msa0209080 | Msa0427860 | -0.819396 | 1.187042e-52 | -8.615850e-47 |
| Msa0209080 | Msa0432160 | 0.809158 | 2.172436e-50 | -8.615850e-47 |
| Msa0209080 | Msa0434570 | 0.812687 | 3.739493e-51 | -8.615850e-47 |
| Msa0209080 | Msa0434770 | 0.812409 | 4.301975e-51 | -8.615850e-47 |
| Msa0209080 | Msa0435220 | 0.812623 | 3.862471e-51 | -8.615850e-47 |
| Msa0209080 | Msa0436190 | 0.806875 | 6.651761e-50 | -8.615850e-47 |
| Msa0209080 | Msa0442610 | 0.817929 | 2.555170e-52 | -8.615850e-47 |
| Msa0209080 | Msa0450140 | 0.803551 | 3.302932e-49 | -8.615850e-47 |
| Msa0209080 | Msa0450400 | -0.805015 | 1.637149e-49 | -8.615850e-47 |
| Msa0209080 | Msa0460100 | 0.842516 | 2.465166e-58 | -8.615850e-47 |
| Msa0209080 | Msa0474090 | -0.810518 | 1.107435e-50 | -8.615850e-47 |
| Msa0209080 | Msa0476680 | 0.806584 | 7.662881e-50 | -8.615850e-47 |
| Msa0209080 | Msa0479330 | 0.815438 | 9.244929e-52 | -8.615850e-47 |
| Msa0209080 | Msa0481030 | 0.805293 | 1.431627e-49 | -8.615850e-47 |
| Msa0209080 | Msa0481810 | 0.800191 | 1.618159e-48 | -8.615850e-47 |
| Msa0209080 | Msa0482180 | 0.804503 | 2.093484e-49 | -8.615850e-47 |
| Msa0209080 | Msa0482940 | 0.836883 | 7.208263e-57 | -8.615850e-47 |
| Msa0209080 | Msa0483040 | 0.807989 | 3.860019e-50 | -8.615850e-47 |
| Msa0209080 | Msa0485490 | 0.802813 | 4.694526e-49 | -8.615850e-47 |
| Msa0209080 | Msa0485710 | 0.841223 | 5.413594e-58 | -8.615850e-47 |
| Msa0209080 | Msa0491000 | 0.806205 | 9.211152e-50 | -8.615850e-47 |
| Msa0209080 | Msa0511770 | 0.826681 | 2.374077e-54 | -8.615850e-47 |
| Msa0209080 | Msa0518170 | 0.849602 | 2.910467e-60 | -8.615850e-47 |
| Msa0209080 | Msa0518950 | 0.804887 | 1.741167e-49 | -8.615850e-47 |
| Msa0209080 | Msa0520270 | 0.804119 | 2.516980e-49 | -8.615850e-47 |
| Msa0209080 | Msa0521010 | 0.804623 | 1.976570e-49 | -8.615850e-47 |
| Msa0209080 | Msa0524600 | 0.818379 | 2.021669e-52 | -8.615850e-47 |
| Msa0209080 | Msa0527740 | 0.825352 | 4.911452e-54 | -8.615850e-47 |
| Msa0209080 | Msa0531250 | 0.813872 | 2.053782e-51 | -8.615850e-47 |
| Msa0209080 | Msa0532980 | 0.809788 | 1.591343e-50 | -8.615850e-47 |
| Msa0209080 | Msa0534050 | 0.802453 | 5.570496e-49 | -8.615850e-47 |
| Msa0209080 | Msa0534410 | 0.812575 | 3.956324e-51 | -8.615850e-47 |
| Msa0209080 | Msa0542290 | 0.816885 | 4.389876e-52 | -8.615850e-47 |
| Msa0209080 | Msa0542560 | 0.844574 | 6.948280e-59 | -8.615850e-47 |
| Msa0209080 | Msa0544840 | 0.844108 | 9.270618e-59 | -8.615850e-47 |
| Msa0209080 | Msa0546570 | 0.803433 | 3.494681e-49 | -8.615850e-47 |
| Msa0209080 | Msa0547160 | 0.847199 | 1.345054e-59 | -8.615850e-47 |
| Msa0209080 | Msa0549780 | 0.810197 | 1.299207e-50 | -8.615850e-47 |
| Msa0209080 | Msa0556790 | 0.811153 | 8.071378e-51 | -8.615850e-47 |
| Msa0209080 | Msa0560500 | 0.804380 | 2.221249e-49 | -8.615850e-47 |
| Msa0209080 | Msa0580230 | 0.800938 | 1.139640e-48 | -8.615850e-47 |
| Msa0209080 | Msa0588090 | 0.807497 | 4.910899e-50 | -8.615850e-47 |
| Msa0209080 | Msa0588260 | 0.803840 | 2.877432e-49 | -8.615850e-47 |
| Msa0209080 | Msa0590650 | 0.814395 | 1.574822e-51 | -8.615850e-47 |
| Msa0209080 | Msa0600450 | 0.846098 | 2.688080e-59 | -8.615850e-47 |
| Msa0209080 | Msa0603570 | 0.805152 | 1.532379e-49 | -8.615850e-47 |
| Msa0209080 | Msa0604290 | 0.813097 | 3.041831e-51 | -8.615850e-47 |
| Msa0209080 | Msa0607690 | 0.834545 | 2.817136e-56 | -8.615850e-47 |
| Msa0209080 | Msa0610130 | 0.808733 | 2.679440e-50 | -8.615850e-47 |
| Msa0209080 | Msa0610180 | 0.811173 | 7.990995e-51 | -8.615850e-47 |
| Msa0209080 | Msa0615680 | 0.805428 | 1.341473e-49 | -8.615850e-47 |
| Msa0209080 | Msa0618950 | 0.813511 | 2.466770e-51 | -8.615850e-47 |
| Msa0209080 | Msa0618970 | 0.813691 | 2.251655e-51 | -8.615850e-47 |
| Msa0209080 | Msa0620330 | 0.801459 | 8.914316e-49 | -8.615850e-47 |
| Msa0209080 | Msa0628290 | 0.831603 | 1.519882e-55 | -8.615850e-47 |
| Msa0209080 | Msa0628420 | 0.821016 | 5.051278e-53 | -8.615850e-47 |
| Msa0209080 | Msa0630950 | 0.813903 | 2.021698e-51 | -8.615850e-47 |
| Msa0209080 | Msa0631350 | 0.819678 | 1.023653e-52 | -8.615850e-47 |
| Msa0209080 | Msa0640940 | 0.828874 | 7.053764e-55 | -8.615850e-47 |
| Msa0209080 | Msa0642970 | 0.812855 | 3.436691e-51 | -8.615850e-47 |
| Msa0209080 | Msa0652300 | 0.802710 | 4.930732e-49 | -8.615850e-47 |
| Msa0209080 | Msa0654620 | 0.801487 | 8.798531e-49 | -8.615850e-47 |
| Msa0209080 | Msa0656960 | 0.800483 | 1.411016e-48 | -8.615850e-47 |
| Msa0209080 | Msa0657120 | 0.816170 | 6.348379e-52 | -8.615850e-47 |
| Msa0209080 | Msa0662630 | 0.855232 | 7.244730e-62 | -8.615850e-47 |
| Msa0209080 | Msa0669720 | 0.838452 | 2.851458e-57 | -8.615850e-47 |
| Msa0209080 | Msa0669760 | 0.824400 | 8.241411e-54 | -8.615850e-47 |
| Msa0209080 | Msa0679360 | 0.844700 | 6.426289e-59 | -8.615850e-47 |
| Msa0209080 | Msa0682680 | 0.811685 | 6.187665e-51 | -8.615850e-47 |
| Msa0209080 | Msa0683140 | 0.801136 | 1.038363e-48 | -8.615850e-47 |
| Msa0209080 | Msa0686080 | 0.812359 | 4.412366e-51 | -8.615850e-47 |
| Msa0209080 | Msa0689320 | 0.823728 | 1.184949e-53 | -8.615850e-47 |
| Msa0209080 | Msa0689500 | 0.800603 | 1.333963e-48 | -8.615850e-47 |
| Msa0209080 | Msa0693210 | 0.802358 | 5.825802e-49 | -8.615850e-47 |
| Msa0209080 | Msa0694840 | 0.805874 | 1.081438e-49 | -8.615850e-47 |
| Msa0209080 | Msa0697720 | 0.832030 | 1.192666e-55 | -8.615850e-47 |
| Msa0209080 | Msa0701100 | 0.824853 | 6.444358e-54 | -8.615850e-47 |
| Msa0209080 | Msa0703910 | 0.817776 | 2.766984e-52 | -8.615850e-47 |
| Msa0209080 | Msa0705390 | 0.822986 | 1.766185e-53 | -8.615850e-47 |
| Msa0209080 | Msa0705990 | 0.833142 | 6.319772e-56 | -8.615850e-47 |
| Msa0209080 | Msa0719180 | 0.836630 | 8.359176e-57 | -8.615850e-47 |
| Msa0209080 | Msa0726080 | 0.846248 | 2.447026e-59 | -8.615850e-47 |
| Msa0209080 | Msa0741440 | 0.808933 | 2.427842e-50 | -8.615850e-47 |
| Msa0209080 | Msa0743530 | 0.819440 | 1.159889e-52 | -8.615850e-47 |
| Msa0209080 | Msa0746170 | 0.808508 | 2.991782e-50 | -8.615850e-47 |
| Msa0209080 | Msa0746210 | 0.806813 | 6.854588e-50 | -8.615850e-47 |
| Msa0209080 | Msa0750850 | 0.819103 | 1.384517e-52 | -8.615850e-47 |
| Msa0209080 | Msa0760350 | 0.808797 | 2.596367e-50 | -8.615850e-47 |
| Msa0209080 | Msa0765180 | 0.817691 | 2.891693e-52 | -8.615850e-47 |
| Msa0209080 | Msa0769970 | 0.801790 | 7.623474e-49 | -8.615850e-47 |
| Msa0209080 | Msa0792780 | 0.813299 | 2.746592e-51 | -8.615850e-47 |
| Msa0209080 | Msa0800370 | 0.869377 | 3.241805e-66 | -8.615850e-47 |
| Msa0209080 | Msa0801730 | 0.819114 | 1.376208e-52 | -8.615850e-47 |
| Msa0209080 | Msa0813260 | 0.802466 | 5.537309e-49 | -8.615850e-47 |
| Msa0209080 | Msa0822170 | 0.825668 | 4.133587e-54 | -8.615850e-47 |
| Msa0209080 | Msa0822180 | 0.839010 | 2.046090e-57 | -8.615850e-47 |
| Msa0209080 | Msa0822310 | -0.801944 | 7.089173e-49 | -8.615850e-47 |
| Msa0209080 | Msa0822500 | 0.812394 | 4.334802e-51 | -8.615850e-47 |
| Msa0209080 | Msa0823500 | 0.812529 | 4.050614e-51 | -8.615850e-47 |
| Msa0209080 | Msa0827280 | 0.810026 | 1.414273e-50 | -8.615850e-47 |
| Msa0209080 | Msa0829220 | 0.807682 | 4.485962e-50 | -8.615850e-47 |
| Msa0209080 | Msa0831100 | 0.813808 | 2.121815e-51 | -8.615850e-47 |
| Msa0209080 | Msa0832030 | 0.811392 | 7.165287e-51 | -8.615850e-47 |
| Msa0209080 | Msa0833190 | -0.857140 | 1.999355e-62 | -8.615850e-47 |
| Msa0209080 | Msa0838370 | 0.803404 | 3.543318e-49 | -8.615850e-47 |
| Msa0209080 | Msa0844610 | 0.803448 | 3.470192e-49 | -8.615850e-47 |
| Msa0209080 | Msa0846230 | 0.850040 | 2.195137e-60 | -8.615850e-47 |
| Msa0209080 | Msa0847470 | 0.809825 | 1.562816e-50 | -8.615850e-47 |
| Msa0209080 | Msa0858440 | 0.807991 | 3.857017e-50 | -8.615850e-47 |
| Msa0209080 | Msa0861470 | 0.838145 | 3.422428e-57 | -8.615850e-47 |
| Msa0209080 | Msa0861570 | 0.833449 | 5.298141e-56 | -8.615850e-47 |
| Msa0209080 | Msa0862500 | 0.811605 | 6.438447e-51 | -8.615850e-47 |
| Msa0209080 | Msa0866400 | 0.807563 | 4.755408e-50 | -8.615850e-47 |
| Msa0209080 | Msa0879850 | 0.819150 | 1.351119e-52 | -8.615850e-47 |
| Msa0209080 | Msa0879860 | 0.849990 | 2.267577e-60 | -8.615850e-47 |
| Msa0209080 | Msa0897200 | 0.801282 | 9.690417e-49 | -8.615850e-47 |
| Msa0209080 | Msa0944200 | 0.820969 | 5.177613e-53 | -8.615850e-47 |
| Msa0209080 | Msa0944610 | 0.828842 | 7.181685e-55 | -8.615850e-47 |
| Msa0209080 | Msa0963090 | -0.813356 | 2.667958e-51 | -8.615850e-47 |
| Msa0209080 | Msa0970600 | 0.801850 | 7.413083e-49 | -8.615850e-47 |
| Msa0209080 | Msa0974950 | 0.878058 | 3.816675e-69 | -8.615850e-47 |
| Msa0209080 | Msa0980020 | 0.807322 | 5.349191e-50 | -8.615850e-47 |
| Msa0209080 | Msa0980540 | 0.815500 | 8.957170e-52 | -8.615850e-47 |
| Msa0209080 | Msa0993240 | 0.802345 | 5.863387e-49 | -8.615850e-47 |
| Msa0209080 | Msa0994370 | 0.860530 | 1.937220e-63 | -8.615850e-47 |
| Msa0209080 | Msa1001390 | 0.820001 | 8.639267e-53 | -8.615850e-47 |
| Msa0209080 | Msa1025260 | 0.818754 | 1.661857e-52 | -8.615850e-47 |
| Msa0209080 | Msa1028760 | -0.812274 | 4.603574e-51 | -8.615850e-47 |
| Msa0209080 | Msa1037520 | 0.811916 | 5.509171e-51 | -8.615850e-47 |
| Msa0209080 | Msa1039900 | 0.807409 | 5.126995e-50 | -8.615850e-47 |
| Msa0209080 | Msa1042660 | 0.824485 | 7.870304e-54 | -8.615850e-47 |
| Msa0209080 | Msa1059470 | 0.815218 | 1.034921e-51 | -8.615850e-47 |
| Msa0209080 | Msa1063420 | 0.819266 | 1.270968e-52 | -8.615850e-47 |
| Msa0209080 | Msa1063510 | 0.811463 | 6.913669e-51 | -8.615850e-47 |
| Msa0209080 | Msa1067890 | -0.805663 | 1.197243e-49 | -8.615850e-47 |
| Msa0209080 | Msa1071320 | 0.840929 | 6.465007e-58 | -8.615850e-47 |
| Msa0209080 | Msa1077070 | 0.804003 | 2.660597e-49 | -8.615850e-47 |
| Msa0209080 | Msa1081790 | -0.810411 | 1.167979e-50 | -8.615850e-47 |
| Msa0209080 | Msa1089320 | 0.834831 | 2.387278e-56 | -8.615850e-47 |
| Msa0209080 | Msa1093100 | 0.830888 | 2.278963e-55 | -8.615850e-47 |
| Msa0209080 | Msa1096070 | 0.807406 | 5.133305e-50 | -8.615850e-47 |
| Msa0209080 | Msa1109350 | 0.818925 | 1.519438e-52 | -8.615850e-47 |
| Msa0209080 | Msa1111870 | 0.809104 | 2.231520e-50 | -8.615850e-47 |
| Msa0209080 | Msa1113230 | -0.808370 | 3.202502e-50 | -8.615850e-47 |
| Msa0209080 | Msa1120810 | 0.806433 | 8.246617e-50 | -8.615850e-47 |
| Msa0209080 | Msa1125790 | -0.811359 | 7.284656e-51 | -8.615850e-47 |
| Msa0209080 | Msa1130530 | 0.800323 | 1.520931e-48 | -8.615850e-47 |
| Msa0209080 | Msa1131490 | 0.807440 | 5.048760e-50 | -8.615850e-47 |
| Msa0209080 | Msa1133230 | 0.821413 | 4.092027e-53 | -8.615850e-47 |
| Msa0209080 | Msa1133250 | 0.803299 | 3.724458e-49 | -8.615850e-47 |
| Msa0209080 | Msa1152520 | 0.814529 | 1.470525e-51 | -8.615850e-47 |
| Msa0209080 | Msa1158640 | -0.820976 | 5.160360e-53 | -8.615850e-47 |
| Msa0209080 | Msa1158770 | 0.802560 | 5.294502e-49 | -8.615850e-47 |
| Msa0209080 | Msa1165780 | 0.826798 | 2.225759e-54 | -8.615850e-47 |
| Msa0209080 | Msa1176360 | 0.829354 | 5.395404e-55 | -8.615850e-47 |
| Msa0209080 | Msa1178580 | 0.821077 | 4.891913e-53 | -8.615850e-47 |
| Msa0209080 | Msa1188600 | -0.800309 | 1.530840e-48 | -8.615850e-47 |
| Msa0209080 | Msa1196610 | -0.801163 | 1.024901e-48 | -8.615850e-47 |
| Msa0209080 | Msa1200320 | 0.806287 | 8.852583e-50 | -8.615850e-47 |
| Msa0209080 | Msa1202580 | 0.811828 | 5.760020e-51 | -8.615850e-47 |
| Msa0209080 | Msa1203880 | 0.809647 | 1.706431e-50 | -8.615850e-47 |
| Msa0209080 | Msa1205480 | 0.803294 | 3.733415e-49 | -8.615850e-47 |
| Msa0209080 | Msa1205590 | 0.819951 | 8.870083e-53 | -8.615850e-47 |
| Msa0209080 | Msa1206650 | 0.878847 | 2.016730e-69 | -8.615850e-47 |
| Msa0209080 | Msa1207310 | 0.825471 | 4.604514e-54 | -8.615850e-47 |
| Msa0209080 | Msa1211830 | 0.806923 | 6.498559e-50 | -8.615850e-47 |
| Msa0209080 | Msa1212950 | 0.807476 | 4.962537e-50 | -8.615850e-47 |
| Msa0209080 | Msa1221330 | 0.802871 | 4.567221e-49 | -8.615850e-47 |
| Msa0209080 | Msa1233850 | 0.842523 | 2.455700e-58 | -8.615850e-47 |
| Msa0209080 | Msa1240970 | 0.810084 | 1.374211e-50 | -8.615850e-47 |
| Msa0209080 | Msa1242920 | -0.825325 | 4.986159e-54 | -8.615850e-47 |
| Msa0209080 | Msa1250110 | 0.804478 | 2.118935e-49 | -8.615850e-47 |
| Msa0209080 | Msa1254730 | 0.814042 | 1.884284e-51 | -8.615850e-47 |
| Msa0209080 | Msa1256770 | 0.805286 | 1.436733e-49 | -8.615850e-47 |
| Msa0209080 | Msa1258370 | 0.801284 | 9.681463e-49 | -8.615850e-47 |
| Msa0209080 | Msa1258780 | 0.818764 | 1.653126e-52 | -8.615850e-47 |
| Msa0209080 | Msa1270660 | 0.838198 | 3.316614e-57 | -8.615850e-47 |
| Msa0209080 | Msa1270730 | 0.815572 | 8.631010e-52 | -8.615850e-47 |
| Msa0209080 | Msa1276150 | 0.819990 | 8.689525e-53 | -8.615850e-47 |
| Msa0209080 | Msa1276970 | 0.817498 | 3.195895e-52 | -8.615850e-47 |
| Msa0209080 | Msa1288510 | 0.809413 | 1.915750e-50 | -8.615850e-47 |
| Msa0209080 | Msa1296830 | 0.828112 | 1.077477e-54 | -8.615850e-47 |
| Msa0209080 | Msa1298100 | 0.806128 | 9.560689e-50 | -8.615850e-47 |
| Msa0209080 | Msa1299820 | -0.811474 | 6.874586e-51 | -8.615850e-47 |
| Msa0209080 | Msa1303580 | 0.822845 | 1.905044e-53 | -8.615850e-47 |
| Msa0209080 | Msa1307180 | 0.868210 | 7.731093e-66 | -8.615850e-47 |
| Msa0209080 | Msa1315750 | 0.801957 | 7.047055e-49 | -8.615850e-47 |
| Msa0209080 | Msa1316360 | 0.869027 | 4.211970e-66 | -8.615850e-47 |
| Msa0209080 | Msa1316440 | 0.819576 | 1.079913e-52 | -8.615850e-47 |
| Msa0209080 | Msa1330270 | 0.827611 | 1.422168e-54 | -8.615850e-47 |
| Msa0209080 | Msa1331350 | 0.829679 | 4.498875e-55 | -8.615850e-47 |
| Msa0209080 | Msa1336560 | 0.870761 | 1.143063e-66 | -8.615850e-47 |
| Msa0209080 | Msa1339190 | 0.806372 | 8.492141e-50 | -8.615850e-47 |
| Msa0209080 | Msa1346840 | 0.802303 | 5.980910e-49 | -8.615850e-47 |
| Msa0209080 | Msa1351540 | 0.820078 | 8.293938e-53 | -8.615850e-47 |
| Msa0209080 | Msa1352890 | 0.837909 | 3.934758e-57 | -8.615850e-47 |
| Msa0209080 | Msa1355890 | 0.822575 | 2.201297e-53 | -8.615850e-47 |
| Msa0209080 | Msa1360140 | 0.802611 | 5.166904e-49 | -8.615850e-47 |
| Msa0209080 | Msa1364210 | 0.839657 | 1.389655e-57 | -8.615850e-47 |
| Msa0209080 | Msa1369890 | 0.817425 | 3.319301e-52 | -8.615850e-47 |
| Msa0209080 | Msa1370590 | 0.842583 | 2.366637e-58 | -8.615850e-47 |
| Msa0209080 | Msa1371240 | 0.852494 | 4.450755e-61 | -8.615850e-47 |
| Msa0209080 | Msa1372290 | 0.802535 | 5.358238e-49 | -8.615850e-47 |
| Msa0209080 | Msa1376650 | 0.801530 | 8.622506e-49 | -8.615850e-47 |
| Msa0209080 | Msa1381480 | 0.811384 | 7.193503e-51 | -8.615850e-47 |
| Msa0209080 | Msa1382020 | 0.825395 | 4.798949e-54 | -8.615850e-47 |
| Msa0209080 | Msa1384100 | 0.840813 | 6.933656e-58 | -8.615850e-47 |
| Msa0209080 | Msa1384710 | 0.801780 | 7.659868e-49 | -8.615850e-47 |
| Msa0209080 | Msa1389850 | 0.824919 | 6.216649e-54 | -8.615850e-47 |
| Msa0209080 | Msa1395600 | -0.825390 | 4.811358e-54 | -8.615850e-47 |
| Msa0209080 | Msa1395730 | 0.800790 | 1.221403e-48 | -8.615850e-47 |
| Msa0209080 | Msa1397120 | 0.802426 | 5.643131e-49 | -8.615850e-47 |
| Msa0209080 | Msa1407190 | 0.831494 | 1.617336e-55 | -8.615850e-47 |
| Msa0209080 | Msa1407970 | 0.811631 | 6.357764e-51 | -8.615850e-47 |
| Msa0209080 | Msa1411950 | 0.809954 | 1.465519e-50 | -8.615850e-47 |
| Msa0209080 | Msa1416260 | 0.829697 | 4.451504e-55 | -8.615850e-47 |
| Msa0209080 | Msa1421900 | 0.809149 | 2.182561e-50 | -8.615850e-47 |
| Msa0209080 | Msa1426570 | 0.803434 | 3.492582e-49 | -8.615850e-47 |
| Msa0209080 | Msa1428780 | 0.817305 | 3.532362e-52 | -8.615850e-47 |
| Msa0209080 | Msa1432130 | 0.816920 | 4.311275e-52 | -8.615850e-47 |
| Msa0209080 | Msa1435170 | -0.825730 | 3.996602e-54 | -8.615850e-47 |
| Msa0209080 | Msa1436520 | 0.818792 | 1.629349e-52 | -8.615850e-47 |
| Msa0209080 | Msa1437270 | 0.807398 | 5.155451e-50 | -8.615850e-47 |
| Msa0209080 | Msa1442790 | 0.811617 | 6.402015e-51 | -8.615850e-47 |
| Msa0209080 | Msa1444120 | 0.833437 | 5.336604e-56 | -8.615850e-47 |
| Msa0209080 | Msa1445940 | 0.817098 | 3.932404e-52 | -8.615850e-47 |
| Msa0209080 | Msa1446080 | 0.804715 | 1.891135e-49 | -8.615850e-47 |
| Msa0209080 | Msa1447890 | 0.848452 | 6.074427e-60 | -8.615850e-47 |
| Msa0209080 | Msa1454450 | 0.820316 | 7.313666e-53 | -8.615850e-47 |
| Msa0209080 | Msa1454680 | 0.821754 | 3.412477e-53 | -8.615850e-47 |
| Msa0209080 | Msa1458810 | 0.801604 | 8.325271e-49 | -8.615850e-47 |
| Msa0209080 | Msa1459960 | 0.800977 | 1.118646e-48 | -8.615850e-47 |
| Msa0209080 | Msa1463600 | 0.817367 | 3.421756e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209080 | MtrunA17_Chr2g0307551 | 99.359 | 156 | 1 | 0 | 1 | 156 | 1 | 156 | 1.18e-115 | 323 |
| Msa0209080 | MtrunA17_Chr4g0062271 | 84.967 | 153 | 23 | 0 | 1 | 153 | 1 | 153 | 9.34e-98 | 278 |
| Msa0209080 | MtrunA17_Chr1g0185911 | 33.645 | 107 | 71 | 0 | 8 | 114 | 26 | 132 | 2.06e-19 | 80.1 |
| Msa0209080 | MtrunA17_Chr7g0263601 | 32.432 | 111 | 73 | 1 | 12 | 120 | 27 | 137 | 1.07e-17 | 75.5 |
| Msa0209080 | MtrunA17_Chr4g0076381 | 39.744 | 78 | 47 | 0 | 12 | 89 | 59 | 136 | 1.70e-17 | 76.3 |
| Msa0209080 | MtrunA17_Chr1g0195851 | 37.179 | 78 | 49 | 0 | 12 | 89 | 37 | 114 | 2.16e-17 | 75.1 |
| Msa0209080 | MtrunA17_Chr1g0191981 | 35.443 | 79 | 51 | 0 | 13 | 91 | 6 | 84 | 1.59e-16 | 71.2 |
| Msa0209080 | MtrunA17_Chr3g0102351 | 37.179 | 78 | 49 | 0 | 12 | 89 | 28 | 105 | 3.14e-16 | 72.0 |
| Msa0209080 | MtrunA17_Chr1g0165041 | 30.337 | 89 | 62 | 0 | 11 | 99 | 6 | 94 | 3.34e-16 | 72.0 |
| Msa0209080 | MtrunA17_Chr5g0446491 | 34.118 | 85 | 56 | 0 | 7 | 91 | 19 | 103 | 7.31e-16 | 70.9 |
| Msa0209080 | MtrunA17_Chr8g0384451 | 30.088 | 113 | 73 | 1 | 12 | 124 | 41 | 147 | 2.66e-15 | 70.1 |
| Msa0209080 | MtrunA17_Chr4g0067091 | 37.179 | 78 | 49 | 0 | 12 | 89 | 23 | 100 | 2.67e-15 | 70.1 |
| Msa0209080 | MtrunA17_Chr2g0296321 | 33.333 | 105 | 64 | 1 | 12 | 110 | 67 | 171 | 1.18e-14 | 68.9 |
| Msa0209080 | MtrunA17_Chr2g0290491 | 33.333 | 78 | 52 | 0 | 12 | 89 | 18 | 95 | 1.55e-14 | 67.0 |
| Msa0209080 | MtrunA17_Chr8g0382931 | 32.143 | 84 | 57 | 0 | 5 | 88 | 22 | 105 | 2.53e-14 | 67.4 |
| Msa0209080 | MtrunA17_Chr4g0076321 | 35.135 | 74 | 48 | 0 | 16 | 89 | 24 | 97 | 2.12e-13 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209080 | AT5G23090.5 | 79.870 | 154 | 29 | 1 | 1 | 152 | 1 | 154 | 3.81e-89 | 257 |
| Msa0209080 | AT5G23090.2 | 79.870 | 154 | 29 | 1 | 1 | 152 | 1 | 154 | 3.81e-89 | 257 |
| Msa0209080 | AT5G23090.1 | 79.870 | 154 | 29 | 1 | 1 | 152 | 1 | 154 | 3.81e-89 | 257 |
| Msa0209080 | AT5G23090.4 | 79.221 | 154 | 29 | 2 | 1 | 152 | 1 | 153 | 1.81e-86 | 250 |
| Msa0209080 | AT5G08190.1 | 83.803 | 142 | 23 | 0 | 1 | 142 | 1 | 142 | 1.10e-79 | 233 |
| Msa0209080 | AT5G08190.2 | 83.099 | 142 | 23 | 1 | 1 | 142 | 1 | 141 | 4.82e-77 | 226 |
| Msa0209080 | AT5G23090.3 | 71.429 | 154 | 29 | 2 | 1 | 152 | 1 | 141 | 3.72e-75 | 221 |
| Msa0209080 | AT2G38880.11 | 35.484 | 93 | 58 | 1 | 12 | 102 | 22 | 114 | 2.07e-18 | 77.4 |
| Msa0209080 | AT2G38880.8 | 35.484 | 93 | 58 | 1 | 12 | 102 | 22 | 114 | 2.07e-18 | 77.4 |
| Msa0209080 | AT2G38880.7 | 36.471 | 85 | 52 | 1 | 12 | 94 | 22 | 106 | 3.55e-18 | 76.3 |
| Msa0209080 | AT2G38880.2 | 36.471 | 85 | 52 | 1 | 12 | 94 | 22 | 106 | 3.85e-18 | 76.3 |
| Msa0209080 | AT2G38880.1 | 36.471 | 85 | 52 | 1 | 12 | 94 | 22 | 106 | 3.85e-18 | 76.3 |
| Msa0209080 | AT2G38880.5 | 36.471 | 85 | 52 | 1 | 12 | 94 | 22 | 106 | 3.85e-18 | 76.3 |
| Msa0209080 | AT2G38880.4 | 36.471 | 85 | 52 | 1 | 12 | 94 | 22 | 106 | 4.47e-18 | 75.1 |
| Msa0209080 | AT2G38880.3 | 36.471 | 85 | 52 | 1 | 12 | 94 | 22 | 106 | 5.89e-18 | 75.9 |
| Msa0209080 | AT2G38880.9 | 32.292 | 96 | 65 | 0 | 12 | 107 | 22 | 117 | 5.33e-17 | 73.6 |
| Msa0209080 | AT2G38880.10 | 32.292 | 96 | 65 | 0 | 12 | 107 | 22 | 117 | 5.33e-17 | 73.6 |
| Msa0209080 | AT2G38880.6 | 32.292 | 96 | 65 | 0 | 12 | 107 | 22 | 117 | 5.33e-17 | 73.6 |
| Msa0209080 | AT2G37060.2 | 38.750 | 80 | 49 | 0 | 12 | 91 | 31 | 110 | 5.42e-17 | 73.9 |
| Msa0209080 | AT2G37060.3 | 38.750 | 80 | 49 | 0 | 12 | 91 | 31 | 110 | 5.42e-17 | 73.9 |
| Msa0209080 | AT2G37060.1 | 38.750 | 80 | 49 | 0 | 12 | 91 | 31 | 110 | 5.42e-17 | 73.9 |
| Msa0209080 | AT3G53340.5 | 32.558 | 129 | 81 | 2 | 12 | 134 | 30 | 158 | 6.28e-17 | 73.9 |
| Msa0209080 | AT3G53340.1 | 32.558 | 129 | 81 | 2 | 12 | 134 | 30 | 158 | 6.28e-17 | 73.9 |
| Msa0209080 | AT3G53340.4 | 39.744 | 78 | 47 | 0 | 12 | 89 | 30 | 107 | 2.96e-16 | 70.9 |
| Msa0209080 | AT4G14540.1 | 31.818 | 88 | 60 | 0 | 12 | 99 | 22 | 109 | 3.75e-16 | 71.6 |
| Msa0209080 | AT5G47670.2 | 38.462 | 78 | 48 | 0 | 12 | 89 | 30 | 107 | 5.97e-16 | 72.0 |
| Msa0209080 | AT5G47670.1 | 37.500 | 80 | 50 | 0 | 12 | 91 | 59 | 138 | 1.00e-15 | 72.0 |
| Msa0209080 | AT5G47670.3 | 37.500 | 80 | 50 | 0 | 12 | 91 | 59 | 138 | 1.00e-15 | 72.0 |
| Msa0209080 | AT3G53340.3 | 34.737 | 95 | 62 | 0 | 12 | 106 | 30 | 124 | 1.09e-15 | 70.1 |
| Msa0209080 | AT3G53340.2 | 34.737 | 95 | 62 | 0 | 12 | 106 | 30 | 124 | 1.09e-15 | 70.1 |
| Msa0209080 | AT5G47640.1 | 33.735 | 83 | 55 | 0 | 7 | 89 | 23 | 105 | 4.51e-15 | 69.3 |
| Msa0209080 | AT1G21970.1 | 35.000 | 80 | 52 | 0 | 12 | 91 | 60 | 139 | 1.01e-14 | 69.3 |
| Msa0209080 | AT1G09030.1 | 33.750 | 80 | 53 | 0 | 12 | 91 | 4 | 83 | 3.17e-14 | 65.9 |
| Msa0209080 | AT2G13570.1 | 35.065 | 77 | 50 | 0 | 12 | 88 | 37 | 113 | 8.91e-14 | 66.2 |
| Msa0209080 | AT2G47810.1 | 32.895 | 76 | 51 | 0 | 12 | 87 | 52 | 127 | 3.99e-13 | 63.5 |
Find 64 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTTAATGTAATTAATTAA+TGG | 0.241152 | 2_1:-45876917 | Msa0209080:three_prime_UTR |
| GAGCATGTATTGAAAGCTTT+AGG | 0.251459 | 2_1:-45879264 | Msa0209080:CDS |
| TTATATCAGGTTCTTGGATT+TGG | 0.252299 | 2_1:-45878230 | Msa0209080:intron |
| AAGTTTAGAGAACTAACTTT+AGG | 0.270141 | 2_1:-45877086 | Msa0209080:exon |
| TCATATTTATATCAGGTTCT+TGG | 0.296989 | 2_1:-45878236 | Msa0209080:intron |
| ACTAATTGAATTTGAAGATC+TGG | 0.306860 | 2_1:+45880611 | None:intergenic |
| TAATTATAATAAACTATAAT+AGG | 0.328224 | 2_1:+45876772 | None:intergenic |
| CTGCAGCAAGACTCTATAAA+AGG | 0.332402 | 2_1:-45877238 | Msa0209080:intron |
| GAACACTCTTTCTCGTTGTT+TGG | 0.347353 | 2_1:-45880743 | Msa0209080:five_prime_UTR |
| AACATTCAATTAACAAATCC+TGG | 0.352577 | 2_1:+45880209 | None:intergenic |
| AGTTTAGAGAACTAACTTTA+GGG | 0.366270 | 2_1:-45877085 | Msa0209080:exon |
| AGCATGTATTGAAAGCTTTA+GGG | 0.375222 | 2_1:-45879263 | Msa0209080:CDS |
| TCTAAACTTTGGTCAGCATC+TGG | 0.377371 | 2_1:+45877100 | None:intergenic |
| TTGGTCAGCATCTGGTTGAT+TGG | 0.384189 | 2_1:+45877108 | None:intergenic |
| AGACTCACCGATTGAATTTG+AGG | 0.395504 | 2_1:+45880558 | None:intergenic |
| TATCACTAACAGAACACAAA+TGG | 0.404771 | 2_1:+45876949 | None:intergenic |
| AAAGTTAGTTCTCTAAACTT+TGG | 0.415113 | 2_1:+45877089 | None:intergenic |
| TTCTTATCCTCAAATTCAAT+CGG | 0.439159 | 2_1:-45880565 | Msa0209080:intron |
| TAATACAAAGATGGAGCCTA+TGG | 0.442593 | 2_1:-45880438 | Msa0209080:exon |
| ATCACTAACAGAACACAAAT+GGG | 0.449836 | 2_1:+45876950 | None:intergenic |
| CTAATTGAATTTGAAGATCT+GGG | 0.451944 | 2_1:+45880612 | None:intergenic |
| CTCTGCTAATGCTTGTTCCT+CGG | 0.457821 | 2_1:+45877186 | None:intergenic |
| AAGAGAAGATGAAGAGATGA+GGG | 0.481364 | 2_1:+45880682 | None:intergenic |
| AAAGCTTTCAATACATGCTC+AGG | 0.488874 | 2_1:+45879267 | None:intergenic |
| TCTCTTGCAACACGGACATC+AGG | 0.499892 | 2_1:+45880235 | None:intergenic |
| GAGGCACGTGCTAGAATGAA+TGG | 0.500006 | 2_1:-45877145 | Msa0209080:CDS |
| CTCAGCTGCACCACTCCACT+TGG | 0.501295 | 2_1:+45877213 | None:intergenic |
| TACGTACTGGATGGATAAGA+AGG | 0.517573 | 2_1:+45880718 | None:intergenic |
| GAAGATGAAGAGATGAGGGT+TGG | 0.517884 | 2_1:+45880686 | None:intergenic |
| AAACTCATTCACTACTGTGC+TGG | 0.521490 | 2_1:-45876990 | Msa0209080:three_prime_UTR |
| TATGTAACAGAGAGGAAAGA+AGG | 0.521621 | 2_1:-45879299 | Msa0209080:CDS |
| CATTTGACTCTGATGAGACA+AGG | 0.522038 | 2_1:+45879325 | None:intergenic |
| GAAGATGCTTCGCTACCTAA+AGG | 0.522042 | 2_1:-45880395 | Msa0209080:intron |
| AAAGAGAAGATGAAGAGATG+AGG | 0.525840 | 2_1:+45880681 | None:intergenic |
| TTGTTAATTGAATGTTGTGT+AGG | 0.530693 | 2_1:-45880202 | Msa0209080:intron |
| TCATAATAATAATACAAAGA+TGG | 0.534014 | 2_1:-45880447 | Msa0209080:exon |
| AAGCATTAGCAGAGCAGCAA+AGG | 0.547129 | 2_1:-45877177 | Msa0209080:CDS |
| GATTTAGCAACAATATCCAT+AGG | 0.550892 | 2_1:+45880422 | None:intergenic |
| AATGGGGAGCACATCTACAT+AGG | 0.563367 | 2_1:+45876967 | None:intergenic |
| CATATAATTCTAAATAGACA+AGG | 0.573633 | 2_1:+45876881 | None:intergenic |
| ATCTGGTTGATTGGAAGTAA+CGG | 0.576071 | 2_1:+45877117 | None:intergenic |
| TGGATTTGGCGAGTACATTG+AGG | 0.592411 | 2_1:-45878216 | Msa0209080:CDS |
| GGATATTGTTGCTAAATCAA+AGG | 0.593602 | 2_1:-45880417 | Msa0209080:CDS |
| ACATTCAATTAACAAATCCT+GGG | 0.595298 | 2_1:+45880210 | None:intergenic |
| AGCATATGAACAACACAAGA+TGG | 0.603905 | 2_1:-45878183 | Msa0209080:CDS |
| AATCGAGCTAAATTACCCAC+AGG | 0.617452 | 2_1:+45877020 | None:intergenic |
| GCATGTATTGAAAGCTTTAG+GGG | 0.617694 | 2_1:-45879262 | Msa0209080:intron |
| CCTGGGTATCTCTTGCAACA+CGG | 0.619026 | 2_1:+45880227 | None:intergenic |
| CCGTGTTGCAAGAGATACCC+AGG | 0.621479 | 2_1:-45880227 | Msa0209080:CDS |
| CATCTCTGACTCTTACCTGT+GGG | 0.621607 | 2_1:-45877035 | Msa0209080:three_prime_UTR |
| GCATCTCTGACTCTTACCTG+TGG | 0.621691 | 2_1:-45877036 | Msa0209080:three_prime_UTR |
| CTTGCAACACGGACATCAGG+TGG | 0.632584 | 2_1:+45880238 | None:intergenic |
| ATAAAAGGTGCCAAGTGGAG+TGG | 0.637786 | 2_1:-45877223 | Msa0209080:CDS |
| GCAGCAAAGGATGTTTGCAG+AGG | 0.645184 | 2_1:-45877164 | Msa0209080:CDS |
| ACTCTATAAAAGGTGCCAAG+TGG | 0.653102 | 2_1:-45877228 | Msa0209080:CDS |
| ATATAATTCTAAATAGACAA+GGG | 0.661018 | 2_1:+45876882 | None:intergenic |
| GCACGTGCTAGAATGAATGG+AGG | 0.666011 | 2_1:-45877142 | Msa0209080:CDS |
| CACGTGCTAGAATGAATGGA+GGG | 0.684842 | 2_1:-45877141 | Msa0209080:CDS |
| AAGCGCGTGCATGATGACGA+AGG | 0.689936 | 2_1:-45880776 | Msa0209080:five_prime_UTR |
| ACAACACAAGATGGAGACAG+TGG | 0.698542 | 2_1:-45878174 | Msa0209080:intron |
| AAATGAAGTATGTAACAGAG+AGG | 0.704349 | 2_1:-45879307 | Msa0209080:CDS |
| ATTGAATTTGAAGATCTGGG+AGG | 0.725458 | 2_1:+45880615 | None:intergenic |
| TCACTAACAGAACACAAATG+GGG | 0.727901 | 2_1:+45876951 | None:intergenic |
| TGGTGCAGCTGAGATGACCG+AGG | 0.734859 | 2_1:-45877203 | Msa0209080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTTTTTAAAATAAA+AGG | - | chr2_1:45878661-45878680 | Msa0209080:intron | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr2_1:45878841-45878860 | Msa0209080:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr2_1:45878840-45878859 | Msa0209080:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr2_1:45878841-45878860 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr2_1:45878840-45878859 | None:intergenic | 0.0% |
| !! | ATAAAAAAAATTATACCTTT+AGG | + | chr2_1:45877180-45877199 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTAAAATAAAAGG+AGG | - | chr2_1:45878664-45878683 | Msa0209080:intron | 10.0% |
| !!! | TTTTTTTTAAAATAAAAGGA+GGG | - | chr2_1:45878665-45878684 | Msa0209080:intron | 10.0% |
| !! | AAGTTAATGTAATTAATTAA+TGG | - | chr2_1:45880640-45880659 | Msa0209080:five_prime_UTR | 10.0% |
| !! | TCATAATAATAATACAAAGA+TGG | - | chr2_1:45877110-45877129 | Msa0209080:CDS | 15.0% |
| !! | AAATAATAGATAAATTATGC+AGG | + | chr2_1:45877688-45877707 | None:intergenic | 15.0% |
| !! | TAAACAAATGATAGTTAATA+TGG | + | chr2_1:45878552-45878571 | None:intergenic | 15.0% |
| !!! | TACTTTTCTTTTAATTGATT+TGG | - | chr2_1:45879298-45879317 | Msa0209080:CDS | 15.0% |
| !! | ATTGAAATCTTTATGATTTA+TGG | - | chr2_1:45880022-45880041 | Msa0209080:intron | 15.0% |
| !! | ATATAATTCTAAATAGACAA+GGG | + | chr2_1:45880678-45880697 | None:intergenic | 15.0% |
| !! | AATTTGAGGATAAGAAAAAA+GGG | + | chr2_1:45876988-45877007 | None:intergenic | 20.0% |
| !! | AATTATGGCTTCATTAATTA+TGG | + | chr2_1:45877546-45877565 | None:intergenic | 20.0% |
| !!! | CTTTTGCTTATATTTTGTAA+CGG | - | chr2_1:45877968-45877987 | Msa0209080:intron | 20.0% |
| !!! | TTTACTAAATGAAGTTTTGT+TGG | - | chr2_1:45878189-45878208 | Msa0209080:CDS | 20.0% |
| !!! | ATCAAAATTTGGAGTTAAAA+TGG | + | chr2_1:45878340-45878359 | None:intergenic | 20.0% |
| !! | CGATCAAATTAAAATTGAAA+AGG | + | chr2_1:45878369-45878388 | None:intergenic | 20.0% |
| !!! | GTTTAGAATTTTGCAATAAA+AGG | - | chr2_1:45879161-45879180 | Msa0209080:intron | 20.0% |
| !!! | AAACAAAAGTATGTTGTATT+TGG | + | chr2_1:45879218-45879237 | None:intergenic | 20.0% |
| !! | CATATAATTCTAAATAGACA+AGG | + | chr2_1:45880679-45880698 | None:intergenic | 20.0% |
| ! | CTAATTGAATTTGAAGATCT+GGG | + | chr2_1:45876948-45876967 | None:intergenic | 25.0% |
| ! | ACTAATTGAATTTGAAGATC+TGG | + | chr2_1:45876949-45876968 | None:intergenic | 25.0% |
| ! | GAATTTGAGGATAAGAAAAA+AGG | + | chr2_1:45876989-45877008 | None:intergenic | 25.0% |
| ! | TTCTTATCCTCAAATTCAAT+CGG | - | chr2_1:45876992-45877011 | Msa0209080:three_prime_UTR | 25.0% |
| ! | ACATTCAATTAACAAATCCT+GGG | + | chr2_1:45877350-45877369 | None:intergenic | 25.0% |
| ! | AACATTCAATTAACAAATCC+TGG | + | chr2_1:45877351-45877370 | None:intergenic | 25.0% |
| ! | TTGTTAATTGAATGTTGTGT+AGG | - | chr2_1:45877355-45877374 | Msa0209080:intron | 25.0% |
| !! | AAAAATCTGAAACAAACCAA+GGG | + | chr2_1:45877499-45877518 | None:intergenic | 25.0% |
| !! | AAAAAATCTGAAACAAACCA+AGG | + | chr2_1:45877500-45877519 | None:intergenic | 25.0% |
| ! | TCAAACAAAATGGATGTATT+TGG | - | chr2_1:45877905-45877924 | Msa0209080:intron | 25.0% |
| !! | GATGTATTTGGTTCAAAATT+TGG | - | chr2_1:45877917-45877936 | Msa0209080:intron | 25.0% |
| !!! | TCAAAGAAAGTTGATGTATT+TGG | + | chr2_1:45877944-45877963 | None:intergenic | 25.0% |
| ! | CATAAAATCTAAGCTGAAAA+TGG | - | chr2_1:45878002-45878021 | Msa0209080:intron | 25.0% |
| !! | GATCTAAAACAACACATTTA+TGG | + | chr2_1:45878126-45878145 | None:intergenic | 25.0% |
| !! | AATTTGGAGTTAAAATGGTT+TGG | + | chr2_1:45878335-45878354 | None:intergenic | 25.0% |
| !!! | TTTAACTCCAAATTTTGATG+TGG | - | chr2_1:45878341-45878360 | Msa0209080:intron | 25.0% |
| !! | TTTAAAATAAAAGGAGGGAA+AGG | - | chr2_1:45878670-45878689 | Msa0209080:intron | 25.0% |
| ! | ATACTGTAATCAATTGTCAA+TGG | + | chr2_1:45878807-45878826 | None:intergenic | 25.0% |
| !!! | GTGATTATTTTGTTGTATCT+GGG | - | chr2_1:45879133-45879152 | Msa0209080:intron | 25.0% |
| !! | GATTTGGTCATATTTATATC+AGG | - | chr2_1:45879314-45879333 | Msa0209080:CDS | 25.0% |
| ! | TCATATTTATATCAGGTTCT+TGG | - | chr2_1:45879321-45879340 | Msa0209080:CDS | 25.0% |
| ! | GAAAATATTAAGAGTAACCT+TGG | - | chr2_1:45879684-45879703 | Msa0209080:intron | 25.0% |
| ! | TTATCTTCGAATAATACTAC+TGG | - | chr2_1:45879733-45879752 | Msa0209080:intron | 25.0% |
| ! | ATCTTTATGATTTATGGATC+TGG | - | chr2_1:45880028-45880047 | Msa0209080:intron | 25.0% |
| ! | TCTTTATGATTTATGGATCT+GGG | - | chr2_1:45880029-45880048 | Msa0209080:intron | 25.0% |
| !! | CAGTTAATTTCTGTTGTTTA+TGG | - | chr2_1:45880254-45880273 | Msa0209080:CDS | 25.0% |
| !! | AAAGTTAGTTCTCTAAACTT+TGG | + | chr2_1:45880471-45880490 | None:intergenic | 25.0% |
| ! | AAGTTTAGAGAACTAACTTT+AGG | - | chr2_1:45880471-45880490 | Msa0209080:intron | 25.0% |
| ! | AGTTTAGAGAACTAACTTTA+GGG | - | chr2_1:45880472-45880491 | Msa0209080:intron | 25.0% |
| !!! | TCTTTATTTTCTTGAAGCAT+AGG | - | chr2_1:45880495-45880514 | Msa0209080:intron | 25.0% |
| GATTTAGCAACAATATCCAT+AGG | + | chr2_1:45877138-45877157 | None:intergenic | 30.0% | |
| GGATATTGTTGCTAAATCAA+AGG | - | chr2_1:45877140-45877159 | Msa0209080:CDS | 30.0% | |
| TAGTGATTAATAATTGCCCT+TGG | - | chr2_1:45877480-45877499 | Msa0209080:intron | 30.0% | |
| !! | AAGCCATAATTGATTTTGTG+CGG | - | chr2_1:45877555-45877574 | Msa0209080:intron | 30.0% |
| TTATGAACACCACCAAAAAT+CGG | + | chr2_1:45877619-45877638 | None:intergenic | 30.0% | |
| !!! | TTTTGGTGGTGTTCATAATT+CGG | - | chr2_1:45877621-45877640 | Msa0209080:intron | 30.0% |
| ATTGATCTCAAAACATGTGA+CGG | + | chr2_1:45877764-45877783 | None:intergenic | 30.0% | |
| ! | TTGCTTATATTTTGTAACGG+AGG | - | chr2_1:45877971-45877990 | Msa0209080:intron | 30.0% |
| !! | TGCTTATATTTTGTAACGGA+GGG | - | chr2_1:45877972-45877991 | Msa0209080:intron | 30.0% |
| TCTATGTCTCAACTATAATG+AGG | - | chr2_1:45878096-45878115 | Msa0209080:intron | 30.0% | |
| CATGAATCATCTATCAAAAC+TGG | + | chr2_1:45878148-45878167 | None:intergenic | 30.0% | |
| !! | CAGTTTTGATAGATGATTCA+TGG | - | chr2_1:45878146-45878165 | Msa0209080:intron | 30.0% |
| AAATGAAGTATGTAACAGAG+AGG | - | chr2_1:45878250-45878269 | Msa0209080:intron | 30.0% | |
| AGCATGTATTGAAAGCTTTA+GGG | - | chr2_1:45878294-45878313 | Msa0209080:intron | 30.0% | |
| AAAGGATCCACATCAAAATT+TGG | + | chr2_1:45878351-45878370 | None:intergenic | 30.0% | |
| ! | TGATTTGTATCTTTCTCATG+TGG | - | chr2_1:45878427-45878446 | Msa0209080:intron | 30.0% |
| CAAGAATAACACCATTGAAA+AGG | + | chr2_1:45878455-45878474 | None:intergenic | 30.0% | |
| ATCTTAATGATACGATGTAG+CGG | - | chr2_1:45878577-45878596 | Msa0209080:intron | 30.0% | |
| !!! | AATTTTTTTTAAACCCGCCA+CGG | - | chr2_1:45878776-45878795 | Msa0209080:intron | 30.0% |
| ! | TTTTATCAAGCAACACCTTA+AGG | - | chr2_1:45878925-45878944 | Msa0209080:intron | 30.0% |
| AAAGTGAAAATCACACCTTA+AGG | + | chr2_1:45878943-45878962 | None:intergenic | 30.0% | |
| ACACCTTCATAAAAGTAAGT+TGG | - | chr2_1:45878985-45879004 | Msa0209080:intron | 30.0% | |
| !! | ACACCAACTTACTTTTATGA+AGG | + | chr2_1:45878991-45879010 | None:intergenic | 30.0% |
| ATAAAAGACACCTTCACAAA+AGG | - | chr2_1:45879040-45879059 | Msa0209080:intron | 30.0% | |
| !! | CGTGATTATTTTGTTGTATC+TGG | - | chr2_1:45879132-45879151 | Msa0209080:intron | 30.0% |
| TTATATCAGGTTCTTGGATT+TGG | - | chr2_1:45879327-45879346 | Msa0209080:CDS | 30.0% | |
| ATCCATTGTGGATATATTGT+AGG | - | chr2_1:45879549-45879568 | Msa0209080:intron | 30.0% | |
| AATTCATCTCTAACAATGCA+AGG | + | chr2_1:45879590-45879609 | None:intergenic | 30.0% | |
| TACTCATGACTCAACAATTT+GGG | + | chr2_1:45879660-45879679 | None:intergenic | 30.0% | |
| ATACTCATGACTCAACAATT+TGG | + | chr2_1:45879661-45879680 | None:intergenic | 30.0% | |
| ! | TTTTATGGGTCCTTCTATAA+TGG | + | chr2_1:45879925-45879944 | None:intergenic | 30.0% |
| TTATAGAAGGACCCATAAAA+CGG | - | chr2_1:45879925-45879944 | Msa0209080:intron | 30.0% | |
| GGCACATCATATTAATTAAC+TGG | - | chr2_1:45880214-45880233 | Msa0209080:CDS | 30.0% | |
| ! | TGTTGTTTATGGATTGACTT+TGG | - | chr2_1:45880265-45880284 | Msa0209080:CDS | 30.0% |
| ATCACTAACAGAACACAAAT+GGG | + | chr2_1:45880610-45880629 | None:intergenic | 30.0% | |
| TATCACTAACAGAACACAAA+TGG | + | chr2_1:45880611-45880630 | None:intergenic | 30.0% | |
| AAGAGAAGATGAAGAGATGA+GGG | + | chr2_1:45876878-45876897 | None:intergenic | 35.0% | |
| AAAGAGAAGATGAAGAGATG+AGG | + | chr2_1:45876879-45876898 | None:intergenic | 35.0% | |
| ATTGAATTTGAAGATCTGGG+AGG | + | chr2_1:45876945-45876964 | None:intergenic | 35.0% | |
| TAATACAAAGATGGAGCCTA+TGG | - | chr2_1:45877119-45877138 | Msa0209080:CDS | 35.0% | |
| AATTGAATGTTGTGTAGGTC+AGG | - | chr2_1:45877360-45877379 | Msa0209080:intron | 35.0% | |
| !! | TATGGTGTTATCACCTATGT+TGG | + | chr2_1:45877581-45877600 | None:intergenic | 35.0% |
| !!! | TTATCGCATTTGCCGATTTT+TGG | - | chr2_1:45877604-45877623 | Msa0209080:intron | 35.0% |
| !! | TTTGGTGGTGTTCATAATTC+GGG | - | chr2_1:45877622-45877641 | Msa0209080:intron | 35.0% |
| TTGATCTCAAAACATGTGAC+GGG | + | chr2_1:45877763-45877782 | None:intergenic | 35.0% | |
| ! | TCTTGATTTGAAGCCGATAA+AGG | - | chr2_1:45877834-45877853 | Msa0209080:intron | 35.0% |
| GTCATTAGGTCAACCTTTAT+CGG | + | chr2_1:45877850-45877869 | None:intergenic | 35.0% | |
| ! | GAAAATGTAAGCAAAAGTGC+AGG | - | chr2_1:45877882-45877901 | Msa0209080:intron | 35.0% |
| AAAGTGCAGGTCAAACAAAA+TGG | - | chr2_1:45877895-45877914 | Msa0209080:intron | 35.0% | |
| TATGTAACAGAGAGGAAAGA+AGG | - | chr2_1:45878258-45878277 | Msa0209080:intron | 35.0% | |
| AAAGCTTTCAATACATGCTC+AGG | + | chr2_1:45878293-45878312 | None:intergenic | 35.0% | |
| GAGCATGTATTGAAAGCTTT+AGG | - | chr2_1:45878293-45878312 | Msa0209080:intron | 35.0% | |
| ! | GCATGTATTGAAAGCTTTAG+GGG | - | chr2_1:45878295-45878314 | Msa0209080:intron | 35.0% |
| TATATTATTTGCCCACTCCT+TGG | - | chr2_1:45878391-45878410 | Msa0209080:intron | 35.0% | |
| ! | TTGCCTTGTAGTTAGTTTGA+TGG | - | chr2_1:45878483-45878502 | Msa0209080:intron | 35.0% |
| TAGTTAATATGGCTCCCTAA+AGG | + | chr2_1:45878541-45878560 | None:intergenic | 35.0% | |
| ! | TTTTGTTACAAGACACCCTT+TGG | - | chr2_1:45878895-45878914 | Msa0209080:intron | 35.0% |
| TGATAAAAGACACCACCAAA+GGG | + | chr2_1:45878913-45878932 | None:intergenic | 35.0% | |
| TTGATAAAAGACACCACCAA+AGG | + | chr2_1:45878914-45878933 | None:intergenic | 35.0% | |
| ! | ATAGAAGACACCTTTTGTGA+AGG | + | chr2_1:45879053-45879072 | None:intergenic | 35.0% |
| AGCATATGAACAACACAAGA+TGG | - | chr2_1:45879374-45879393 | Msa0209080:intron | 35.0% | |
| TCGAGTGATATTAGACAACA+TGG | - | chr2_1:45879447-45879466 | Msa0209080:intron | 35.0% | |
| TGAGAGGTCTTTGTATCTTA+AGG | + | chr2_1:45879508-45879527 | None:intergenic | 35.0% | |
| TACAAAGACCTCTCAATTTG+AGG | - | chr2_1:45879513-45879532 | Msa0209080:intron | 35.0% | |
| TGCCTACAATATATCCACAA+TGG | + | chr2_1:45879554-45879573 | None:intergenic | 35.0% | |
| ACCCATGACTTAGGTTAATT+GGG | - | chr2_1:45879621-45879640 | Msa0209080:intron | 35.0% | |
| TCCCAATTAACCTAAGTCAT+GGG | + | chr2_1:45879625-45879644 | None:intergenic | 35.0% | |
| !! | ATCAGATAGAAGCATTGAAC+TGG | + | chr2_1:45879714-45879733 | None:intergenic | 35.0% |
| GCATTAAGAAAAATCACCCT+TGG | + | chr2_1:45879787-45879806 | None:intergenic | 35.0% | |
| TTGGCATAAATTATGTCCTG+TGG | - | chr2_1:45879844-45879863 | Msa0209080:intron | 35.0% | |
| TGGCATAAATTATGTCCTGT+GGG | - | chr2_1:45879845-45879864 | Msa0209080:intron | 35.0% | |
| TTAGAGGTCTCTGTATCTTT+AGG | + | chr2_1:45879879-45879898 | None:intergenic | 35.0% | |
| ! | CTTTCGGAATACCGTTTTAT+GGG | + | chr2_1:45879939-45879958 | None:intergenic | 35.0% |
| TATTCCGAAAGCAAATAGAC+TGG | - | chr2_1:45879948-45879967 | Msa0209080:intron | 35.0% | |
| ! | TTTTATAGAGTCTTGCTGCA+GGG | + | chr2_1:45880320-45880339 | None:intergenic | 35.0% |
| ATCTGGTTGATTGGAAGTAA+CGG | + | chr2_1:45880443-45880462 | None:intergenic | 35.0% | |
| TCACTAACAGAACACAAATG+GGG | + | chr2_1:45880609-45880628 | None:intergenic | 35.0% | |
| GAACACTCTTTCTCGTTGTT+TGG | - | chr2_1:45876814-45876833 | Msa0209080:three_prime_UTR | 40.0% | |
| TACGTACTGGATGGATAAGA+AGG | + | chr2_1:45876842-45876861 | None:intergenic | 40.0% | |
| ! | TGATGCTTTTACGTACTGGA+TGG | + | chr2_1:45876851-45876870 | None:intergenic | 40.0% |
| !!! | TTGGTGATGCTTTTACGTAC+TGG | + | chr2_1:45876855-45876874 | None:intergenic | 40.0% |
| ! | AGACTCACCGATTGAATTTG+AGG | + | chr2_1:45877002-45877021 | None:intergenic | 40.0% |
| TGGCCGCACAAAATCAATTA+TGG | + | chr2_1:45877561-45877580 | None:intergenic | 40.0% | |
| CGGCAAATGCGATAAACTTA+TGG | + | chr2_1:45877599-45877618 | None:intergenic | 40.0% | |
| ! | TTACATTTTCGTAACCGAGG+GGG | + | chr2_1:45877872-45877891 | None:intergenic | 40.0% |
| ! | CTTACATTTTCGTAACCGAG+GGG | + | chr2_1:45877873-45877892 | None:intergenic | 40.0% |
| ! | GCTTACATTTTCGTAACCGA+GGG | + | chr2_1:45877874-45877893 | None:intergenic | 40.0% |
| ! | TGCTTACATTTTCGTAACCG+AGG | + | chr2_1:45877875-45877894 | None:intergenic | 40.0% |
| CATTTGACTCTGATGAGACA+AGG | + | chr2_1:45878235-45878254 | None:intergenic | 40.0% | |
| ATCAATGCACAGAACTTCCA+AGG | + | chr2_1:45878411-45878430 | None:intergenic | 40.0% | |
| ! | CTCATGTGGATCCTTTTCAA+TGG | - | chr2_1:45878441-45878460 | Msa0209080:intron | 40.0% |
| TGGCCATCAAACTAACTACA+AGG | + | chr2_1:45878489-45878508 | None:intergenic | 40.0% | |
| ! | TAGATTAGCTAGGGTCCTTT+AGG | - | chr2_1:45878523-45878542 | Msa0209080:intron | 40.0% |
| ! | AGATTAGCTAGGGTCCTTTA+GGG | - | chr2_1:45878524-45878543 | Msa0209080:intron | 40.0% |
| TGAATCCCACTCTTTGCATT+TGG | - | chr2_1:45878635-45878654 | Msa0209080:intron | 40.0% | |
| GAATCCCACTCTTTGCATTT+GGG | - | chr2_1:45878636-45878655 | Msa0209080:intron | 40.0% | |
| AACACCCAAATGCAAAGAGT+GGG | + | chr2_1:45878643-45878662 | None:intergenic | 40.0% | |
| AAACACCCAAATGCAAAGAG+TGG | + | chr2_1:45878644-45878663 | None:intergenic | 40.0% | |
| TATGTTGTTATGCACCCAGA+GGG | + | chr2_1:45878729-45878748 | None:intergenic | 40.0% | |
| TAACAACATACTAAGCCCTC+TGG | - | chr2_1:45878739-45878758 | Msa0209080:intron | 40.0% | |
| CGAGCAATTCAAAATGCACA+TGG | + | chr2_1:45879430-45879449 | None:intergenic | 40.0% | |
| GTGGATATATTGTAGGCACT+AGG | - | chr2_1:45879556-45879575 | Msa0209080:intron | 40.0% | |
| CACCCATGACTTAGGTTAAT+TGG | - | chr2_1:45879620-45879639 | Msa0209080:intron | 40.0% | |
| CTCCCAATTAACCTAAGTCA+TGG | + | chr2_1:45879626-45879645 | None:intergenic | 40.0% | |
| CTACTGGAAGCTGAATTTCT+AGG | - | chr2_1:45879749-45879768 | Msa0209080:intron | 40.0% | |
| ! | TAATGCTGTTTGTACCAGTC+TGG | - | chr2_1:45879801-45879820 | Msa0209080:intron | 40.0% |
| ! | AATGCTGTTTGTACCAGTCT+GGG | - | chr2_1:45879802-45879821 | Msa0209080:intron | 40.0% |
| TTCCCATATTGTAGGCAACT+TGG | - | chr2_1:45879825-45879844 | Msa0209080:intron | 40.0% | |
| TGCCAAGTTGCCTACAATAT+GGG | + | chr2_1:45879830-45879849 | None:intergenic | 40.0% | |
| ATGCCAAGTTGCCTACAATA+TGG | + | chr2_1:45879831-45879850 | None:intergenic | 40.0% | |
| TAAATTATGTCCTGTGGGCA+AGG | - | chr2_1:45879850-45879869 | Msa0209080:intron | 40.0% | |
| TACAGAGACCTCTAAATGTG+AGG | - | chr2_1:45879884-45879903 | Msa0209080:intron | 40.0% | |
| GGGATCGTATCCATTATAGA+AGG | - | chr2_1:45879912-45879931 | Msa0209080:intron | 40.0% | |
| ! | GCTTTCGGAATACCGTTTTA+TGG | + | chr2_1:45879940-45879959 | None:intergenic | 40.0% |
| CTGTCCAGTCTATTTGCTTT+CGG | + | chr2_1:45879955-45879974 | None:intergenic | 40.0% | |
| TAACCTTACTGTGGGTTCTT+TGG | - | chr2_1:45879991-45880010 | Msa0209080:intron | 40.0% | |
| TATGGATCTGGGAGTTTGTA+TGG | - | chr2_1:45880040-45880059 | Msa0209080:intron | 40.0% | |
| ! | CTTTTATAGAGTCTTGCTGC+AGG | + | chr2_1:45880321-45880340 | None:intergenic | 40.0% |
| CTGCAGCAAGACTCTATAAA+AGG | - | chr2_1:45880319-45880338 | Msa0209080:intron | 40.0% | |
| !! | ACTCTATAAAAGGTGCCAAG+TGG | - | chr2_1:45880329-45880348 | Msa0209080:intron | 40.0% |
| TCTAAACTTTGGTCAGCATC+TGG | + | chr2_1:45880460-45880479 | None:intergenic | 40.0% | |
| AATCGAGCTAAATTACCCAC+AGG | + | chr2_1:45880540-45880559 | None:intergenic | 40.0% | |
| AAACTCATTCACTACTGTGC+TGG | - | chr2_1:45880567-45880586 | Msa0209080:five_prime_UTR | 40.0% | |
| GAAGATGAAGAGATGAGGGT+TGG | + | chr2_1:45876874-45876893 | None:intergenic | 45.0% | |
| GAAGATGCTTCGCTACCTAA+AGG | - | chr2_1:45877162-45877181 | Msa0209080:CDS | 45.0% | |
| ! | TGATTTTGTGCGGCCAACAT+AGG | - | chr2_1:45877565-45877584 | Msa0209080:intron | 45.0% |
| !!! | TCGCATTTGCCGATTTTTGG+TGG | - | chr2_1:45877607-45877626 | Msa0209080:intron | 45.0% |
| CTTCTTGTTCCTGGAAGACA+CGG | - | chr2_1:45877808-45877827 | Msa0209080:intron | 45.0% | |
| ! | TTTGATGGCCATCTGTGCAA+TGG | - | chr2_1:45878498-45878517 | Msa0209080:intron | 45.0% |
| AATCTACGCCATTGCACAGA+TGG | + | chr2_1:45878509-45878528 | None:intergenic | 45.0% | |
| ! | TGCAATGGCGTAGATTAGCT+AGG | - | chr2_1:45878513-45878532 | Msa0209080:intron | 45.0% |
| ! | GCAATGGCGTAGATTAGCTA+GGG | - | chr2_1:45878514-45878533 | Msa0209080:intron | 45.0% |
| ACAAACACTATTGCGAGAGC+AGG | - | chr2_1:45878608-45878627 | Msa0209080:intron | 45.0% | |
| CAAACACTATTGCGAGAGCA+GGG | - | chr2_1:45878609-45878628 | Msa0209080:intron | 45.0% | |
| ATGTTGTTATGCACCCAGAG+GGG | + | chr2_1:45878728-45878747 | None:intergenic | 45.0% | |
| GTATGTTGTTATGCACCCAG+AGG | + | chr2_1:45878730-45878749 | None:intergenic | 45.0% | |
| !!! | TTTTTTTAAACCCGCCACGG+AGG | - | chr2_1:45878779-45878798 | Msa0209080:intron | 45.0% |
| TGTTACAAGACACCCTTTGG+TGG | - | chr2_1:45878898-45878917 | Msa0209080:intron | 45.0% | |
| TGGATTTGGCGAGTACATTG+AGG | - | chr2_1:45879341-45879360 | Msa0209080:intron | 45.0% | |
| ACAACACAAGATGGAGACAG+TGG | - | chr2_1:45879383-45879402 | Msa0209080:intron | 45.0% | |
| AATTTGTGTCCAGTGACCTG+TGG | - | chr2_1:45879473-45879492 | Msa0209080:intron | 45.0% | |
| ATTTGTGTCCAGTGACCTGT+GGG | - | chr2_1:45879474-45879493 | Msa0209080:intron | 45.0% | |
| ! | ACCTCTCAATTTGAGGTCCA+GGG | - | chr2_1:45879520-45879539 | Msa0209080:intron | 45.0% |
| ! | AGCATTGAACTGGTTCACCA+AGG | + | chr2_1:45879704-45879723 | None:intergenic | 45.0% |
| TAGGATCTCTGTCTGACCAA+GGG | - | chr2_1:45879768-45879787 | Msa0209080:intron | 45.0% | |
| TACAATATGGGAACCCAGAC+TGG | + | chr2_1:45879818-45879837 | None:intergenic | 45.0% | |
| AGTCTGGGTTCCCATATTGT+AGG | - | chr2_1:45879817-45879836 | Msa0209080:intron | 45.0% | |
| ACCTCTAAATGTGAGGTCGA+GGG | - | chr2_1:45879891-45879910 | Msa0209080:intron | 45.0% | |
| CGAAAGCAAATAGACTGGAC+AGG | - | chr2_1:45879953-45879972 | Msa0209080:intron | 45.0% | |
| GTAAGGTTAACCCGCTCATT+AGG | + | chr2_1:45879980-45879999 | None:intergenic | 45.0% | |
| CAACCAAAGAACCCACAGTA+AGG | + | chr2_1:45879997-45880016 | None:intergenic | 45.0% | |
| CTTACTGTGGGTTCTTTGGT+TGG | - | chr2_1:45879995-45880014 | Msa0209080:intron | 45.0% | |
| !! | ATAAAAGGTGCCAAGTGGAG+TGG | - | chr2_1:45880334-45880353 | Msa0209080:intron | 45.0% |
| CTCTGCTAATGCTTGTTCCT+CGG | + | chr2_1:45880374-45880393 | None:intergenic | 45.0% | |
| AAGCATTAGCAGAGCAGCAA+AGG | - | chr2_1:45880380-45880399 | Msa0209080:intron | 45.0% | |
| CACGTGCTAGAATGAATGGA+GGG | - | chr2_1:45880416-45880435 | Msa0209080:CDS | 45.0% | |
| TTGGTCAGCATCTGGTTGAT+TGG | + | chr2_1:45880452-45880471 | None:intergenic | 45.0% | |
| CATCTCTGACTCTTACCTGT+GGG | - | chr2_1:45880522-45880541 | Msa0209080:intron | 45.0% | |
| ! | AATGGGGAGCACATCTACAT+AGG | + | chr2_1:45880593-45880612 | None:intergenic | 45.0% |
| !!! | TTTTTATTTTTTTAATTTGA+TGG | - | chr2_1:45877391-45877410 | Msa0209080:intron | 5.0% |
| !! | TAATTATAATAAACTATAAT+AGG | + | chr2_1:45880788-45880807 | None:intergenic | 5.0% |
| TCTCTTGCAACACGGACATC+AGG | + | chr2_1:45877325-45877344 | None:intergenic | 50.0% | |
| CCTGGGTATCTCTTGCAACA+CGG | + | chr2_1:45877333-45877352 | None:intergenic | 50.0% | |
| !! | TCTCAAAACATGTGACGGGC+AGG | + | chr2_1:45877759-45877778 | None:intergenic | 50.0% |
| TGCTAGTCGCTTCTTGTTCC+TGG | - | chr2_1:45877799-45877818 | Msa0209080:intron | 50.0% | |
| TCAAGACATCCGTGTCTTCC+AGG | + | chr2_1:45877820-45877839 | None:intergenic | 50.0% | |
| GCACAGAACTTCCAAGGAGT+GGG | + | chr2_1:45878405-45878424 | None:intergenic | 50.0% | |
| TGCACAGAACTTCCAAGGAG+TGG | + | chr2_1:45878406-45878425 | None:intergenic | 50.0% | |
| TAGTCGATCATGAACCCCTC+TGG | - | chr2_1:45878711-45878730 | Msa0209080:intron | 50.0% | |
| AGTCGATCATGAACCCCTCT+GGG | - | chr2_1:45878712-45878731 | Msa0209080:intron | 50.0% | |
| CAACATACTAAGCCCTCTGG+CGG | - | chr2_1:45878742-45878761 | Msa0209080:intron | 50.0% | |
| AATTGTCAATGGTGCCTCCG+TGG | + | chr2_1:45878796-45878815 | None:intergenic | 50.0% | |
| ! | GACCTCTCAATTTGAGGTCC+AGG | - | chr2_1:45879519-45879538 | Msa0209080:intron | 50.0% |
| ! | CCTCTCAATTTGAGGTCCAG+GGG | - | chr2_1:45879521-45879540 | Msa0209080:intron | 50.0% |
| CCACAATGGATATGATCCCC+TGG | + | chr2_1:45879540-45879559 | None:intergenic | 50.0% | |
| CCAGGGGATCATATCCATTG+TGG | - | chr2_1:45879537-45879556 | Msa0209080:intron | 50.0% | |
| GTTACTCGCACCCATGACTT+AGG | - | chr2_1:45879612-45879631 | Msa0209080:intron | 50.0% | |
| CTAGGATCTCTGTCTGACCA+AGG | - | chr2_1:45879767-45879786 | Msa0209080:intron | 50.0% | |
| GACCTCTAAATGTGAGGTCG+AGG | - | chr2_1:45879890-45879909 | Msa0209080:intron | 50.0% | |
| CCTCTAAATGTGAGGTCGAG+GGG | - | chr2_1:45879892-45879911 | Msa0209080:intron | 50.0% | |
| ACTGGACAGGTCCTAATGAG+CGG | - | chr2_1:45879966-45879985 | Msa0209080:intron | 50.0% | |
| !! | TGAGCGGGTTAACCTTACTG+TGG | - | chr2_1:45879982-45880001 | Msa0209080:intron | 50.0% |
| !! | GAGCGGGTTAACCTTACTGT+GGG | - | chr2_1:45879983-45880002 | Msa0209080:intron | 50.0% |
| TGATGAGCATGCACACACAC+AGG | - | chr2_1:45880139-45880158 | Msa0209080:intron | 50.0% | |
| GATGAGCATGCACACACACA+GGG | - | chr2_1:45880140-45880159 | Msa0209080:intron | 50.0% | |
| ! | TGATGTGCCCTGCTGCTTAT+GGG | + | chr2_1:45880203-45880222 | None:intergenic | 50.0% |
| ! | ATGATGTGCCCTGCTGCTTA+TGG | + | chr2_1:45880204-45880223 | None:intergenic | 50.0% |
| GCAGCAAAGGATGTTTGCAG+AGG | - | chr2_1:45880393-45880412 | Msa0209080:intron | 50.0% | |
| GAGGCACGTGCTAGAATGAA+TGG | - | chr2_1:45880412-45880431 | Msa0209080:CDS | 50.0% | |
| GCACGTGCTAGAATGAATGG+AGG | - | chr2_1:45880415-45880434 | Msa0209080:CDS | 50.0% | |
| GCATCTCTGACTCTTACCTG+TGG | - | chr2_1:45880521-45880540 | Msa0209080:intron | 50.0% | |
| ! | AAGCGCGTGCATGATGACGA+AGG | - | chr2_1:45876781-45876800 | Msa0209080:three_prime_UTR | 55.0% |
| CTTGCAACACGGACATCAGG+TGG | + | chr2_1:45877322-45877341 | None:intergenic | 55.0% | |
| CCGTGTTGCAAGAGATACCC+AGG | - | chr2_1:45877330-45877349 | Msa0209080:intron | 55.0% | |
| CAGGAAACCACACGGCACAA+GGG | + | chr2_1:45877740-45877759 | None:intergenic | 55.0% | |
| GGTTGACCTAATGACCCCCT+CGG | - | chr2_1:45877855-45877874 | Msa0209080:intron | 55.0% | |
| TCGTAACCGAGGGGGTCATT+AGG | + | chr2_1:45877864-45877883 | None:intergenic | 55.0% | |
| TACTAAGCCCTCTGGCGGAA+TGG | - | chr2_1:45878747-45878766 | Msa0209080:intron | 55.0% | |
| TGCATTGCCATTCCGCCAGA+GGG | + | chr2_1:45878757-45878776 | None:intergenic | 55.0% | |
| TTGCATTGCCATTCCGCCAG+AGG | + | chr2_1:45878758-45878777 | None:intergenic | 55.0% | |
| CCCCTGGACCTCAAATTGAG+AGG | + | chr2_1:45879524-45879543 | None:intergenic | 55.0% | |
| !! | CTTTAGGTTGCCTTGCCCAC+AGG | + | chr2_1:45879863-45879882 | None:intergenic | 55.0% |
| CCCCTCGACCTCACATTTAG+AGG | + | chr2_1:45879895-45879914 | None:intergenic | 55.0% | |
| CTGGACAGGTCCTAATGAGC+GGG | - | chr2_1:45879967-45879986 | Msa0209080:intron | 55.0% | |
| GGATTGGGGCTCTCAAGCAT+TGG | + | chr2_1:45880182-45880201 | None:intergenic | 55.0% | |
| ! | CCCTGCTGCTTATGGGATTG+GGG | + | chr2_1:45880196-45880215 | None:intergenic | 55.0% |
| CCCCAATCCCATAAGCAGCA+GGG | - | chr2_1:45880193-45880212 | Msa0209080:intron | 55.0% | |
| ! | GCCCTGCTGCTTATGGGATT+GGG | + | chr2_1:45880197-45880216 | None:intergenic | 55.0% |
| ! | TGCCCTGCTGCTTATGGGAT+TGG | + | chr2_1:45880198-45880217 | None:intergenic | 55.0% |
| ACGATGACCCTTGTGCCGTG+TGG | - | chr2_1:45877730-45877749 | Msa0209080:intron | 60.0% | |
| GCAGGAAACCACACGGCACA+AGG | + | chr2_1:45877741-45877760 | None:intergenic | 60.0% | |
| !! | GTGACGGGCAGGAAACCACA+CGG | + | chr2_1:45877748-45877767 | None:intergenic | 60.0% |
| TGTCAATGGTGCCTCCGTGG+CGG | + | chr2_1:45878793-45878812 | None:intergenic | 60.0% | |
| TGTCCAGTGACCTGTGGGCA+TGG | - | chr2_1:45879479-45879498 | Msa0209080:intron | 60.0% | |
| CTTAAGGCTGCCATGCCCAC+AGG | + | chr2_1:45879492-45879511 | None:intergenic | 60.0% | |
| GCCCCAATCCCATAAGCAGC+AGG | - | chr2_1:45880192-45880211 | Msa0209080:intron | 60.0% | |
| CTCAGCTGCACCACTCCACT+TGG | + | chr2_1:45880347-45880366 | None:intergenic | 60.0% | |
| TGGTGCAGCTGAGATGACCG+AGG | - | chr2_1:45880354-45880373 | Msa0209080:intron | 60.0% | |
| GTCAATGGTGCCTCCGTGGC+GGG | + | chr2_1:45878792-45878811 | None:intergenic | 65.0% | |
| CTGCCATGCCCACAGGTCAC+TGG | + | chr2_1:45879485-45879504 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 45876758 | 45880821 | 45876758 | ID=Msa0209080;Name=Msa0209080 |
| chr2_1 | mRNA | 45876758 | 45880821 | 45876758 | ID=Msa0209080-mRNA-1;Parent=Msa0209080;Name=Msa0209080-mRNA-1;_AED=0.10;_eAED=0.10;_QI=283|1|1|1|0.8|0.66|6|335|156 |
| chr2_1 | exon | 45876758 | 45877254 | 45876758 | ID=Msa0209080-mRNA-1:exon:13197;Parent=Msa0209080-mRNA-1 |
| chr2_1 | exon | 45878175 | 45878243 | 45878175 | ID=Msa0209080-mRNA-1:exon:13196;Parent=Msa0209080-mRNA-1 |
| chr2_1 | exon | 45879263 | 45879357 | 45879263 | ID=Msa0209080-mRNA-1:exon:13195;Parent=Msa0209080-mRNA-1 |
| chr2_1 | exon | 45880203 | 45880292 | 45880203 | ID=Msa0209080-mRNA-1:exon:13194;Parent=Msa0209080-mRNA-1 |
| chr2_1 | exon | 45880396 | 45880477 | 45880396 | ID=Msa0209080-mRNA-1:exon:13193;Parent=Msa0209080-mRNA-1 |
| chr2_1 | exon | 45880566 | 45880821 | 45880566 | ID=Msa0209080-mRNA-1:exon:13192;Parent=Msa0209080-mRNA-1 |
| chr2_1 | five_prime_UTR | 45880566 | 45880821 | 45880566 | ID=Msa0209080-mRNA-1:five_prime_utr;Parent=Msa0209080-mRNA-1 |
| chr2_1 | five_prime_UTR | 45880451 | 45880477 | 45880451 | ID=Msa0209080-mRNA-1:five_prime_utr;Parent=Msa0209080-mRNA-1 |
| chr2_1 | CDS | 45880396 | 45880450 | 45880396 | ID=Msa0209080-mRNA-1:cds;Parent=Msa0209080-mRNA-1 |
| chr2_1 | CDS | 45880203 | 45880292 | 45880203 | ID=Msa0209080-mRNA-1:cds;Parent=Msa0209080-mRNA-1 |
| chr2_1 | CDS | 45879263 | 45879357 | 45879263 | ID=Msa0209080-mRNA-1:cds;Parent=Msa0209080-mRNA-1 |
| chr2_1 | CDS | 45878175 | 45878243 | 45878175 | ID=Msa0209080-mRNA-1:cds;Parent=Msa0209080-mRNA-1 |
| chr2_1 | CDS | 45877093 | 45877254 | 45877093 | ID=Msa0209080-mRNA-1:cds;Parent=Msa0209080-mRNA-1 |
| chr2_1 | three_prime_UTR | 45876758 | 45877092 | 45876758 | ID=Msa0209080-mRNA-1:three_prime_utr;Parent=Msa0209080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
