AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1309130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1309130 MtrunA17_Chr8g0335681 93.130 262 2 1 1 246 1 262 1.86e-180 495
Msa1309130 MtrunA17_Chr7g0250291 73.308 266 51 3 1 246 1 266 3.34e-134 379
Msa1309130 MtrunA17_Chr3g0122601 55.285 246 92 2 18 245 16 261 8.21e-86 256
Msa1309130 MtrunA17_Chr4g0022101 52.564 234 91 3 29 244 1 232 1.53e-84 251
Msa1309130 MtrunA17_Chr7g0254541 52.869 244 83 4 26 244 81 317 3.12e-81 246
Msa1309130 MtrunA17_Chr0c29g0494021 63.736 91 16 2 173 246 1 91 3.98e-28 102
Msa1309130 MtrunA17_Chr0c29g0494031 84.211 38 6 0 87 124 5 42 2.47e-17 74.3
Msa1309130 MtrunA17_Chr0c29g0494041 69.091 55 14 1 1 52 1 55 5.95e-17 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1309130 AT2G44770.1 73.684 266 50 3 1 246 1 266 7.13e-138 388
Msa1309130 AT3G60260.2 70.677 266 58 3 1 246 1 266 7.13e-133 375
Msa1309130 AT3G60260.4 70.677 266 58 3 1 246 1 266 7.13e-133 375
Msa1309130 AT3G60260.1 70.677 266 58 3 1 246 1 266 7.13e-133 375
Msa1309130 AT3G60260.3 71.605 243 52 2 21 246 2 244 3.43e-124 353
Msa1309130 AT1G67400.1 50.570 263 103 4 10 245 19 281 6.51e-85 254
Msa1309130 AT1G03620.8 52.941 238 91 4 25 244 29 263 2.98e-84 252
Msa1309130 AT1G03620.10 52.941 238 91 4 25 244 29 263 2.98e-84 252
Msa1309130 AT1G03620.9 52.941 238 91 4 25 244 29 263 2.98e-84 252
Msa1309130 AT1G03620.1 52.941 238 91 4 25 244 29 263 2.98e-84 252
Msa1309130 AT1G03620.7 52.941 238 91 4 25 244 29 263 2.98e-84 252
Msa1309130 AT1G03620.4 52.941 238 91 4 25 244 29 263 2.98e-84 252
Msa1309130 AT1G03620.5 52.941 238 91 4 25 244 29 263 2.98e-84 252
Msa1309130 AT1G03620.11 52.941 238 91 4 25 244 29 263 2.98e-84 252
Msa1309130 AT1G03620.13 52.941 238 91 4 25 244 29 263 2.98e-84 252
Msa1309130 AT3G03610.4 54.167 240 90 4 26 246 97 335 3.79e-84 254
Msa1309130 AT3G03610.1 54.167 240 90 4 26 246 85 323 3.83e-84 254
Msa1309130 AT3G03610.3 54.167 240 90 4 26 246 85 323 3.83e-84 254
Msa1309130 AT3G03610.2 54.167 240 90 4 26 246 85 323 3.83e-84 254
Msa1309130 AT1G03620.12 52.941 238 91 4 25 244 61 295 1.36e-83 251
Msa1309130 AT1G03620.3 53.419 234 88 4 29 244 1 231 1.81e-83 249
Msa1309130 AT1G03620.6 53.419 234 88 4 29 244 1 231 1.81e-83 249
Msa1309130 AT1G03620.2 53.419 234 88 4 29 244 1 231 1.81e-83 249
Msa1309130 AT3G43400.1 57.143 140 40 2 95 218 72 207 2.73e-48 159

Find 109 sgRNAs with CRISPR-Local

Find 527 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGAGGCCCTTAAGGCTTTA+TGG 0.246095 8_4:+5566958 Msa1309130:intron
GATACTTGCAATTCTAATTC+TGG 0.279039 8_4:+5564223 Msa1309130:CDS
GAAGAAGAAGAATAAGAAAA+TGG 0.281732 8_4:+5564150 Msa1309130:exon
GAGAGAGAAGGAGAAGAGTT+AGG 0.297613 8_4:-5563975 None:intergenic
ATTGCAGCTGAGGCTGTTGC+AGG 0.306569 8_4:+5566014 Msa1309130:intron
TACTTTGTAGAAATCCTTCC+AGG 0.323437 8_4:+5567418 Msa1309130:intron
GATTCATTCATCTCCGGTTC+CGG 0.341018 8_4:+5564034 Msa1309130:five_prime_UTR
TTGTTGGCAGACATGATTAC+TGG 0.341717 8_4:+5571593 Msa1309130:three_prime_UTR
GAGTACCCGTTTGCCGTTGC+TGG 0.351816 8_4:+5567479 Msa1309130:CDS
AGAGAGAAGGAGAAGAGTTA+GGG 0.362482 8_4:-5563974 None:intergenic
TCACAGACTTGCAGTGTGTT+TGG 0.366409 8_4:+5571387 Msa1309130:three_prime_UTR
CATATTACAGGAGGCCCTTA+AGG 0.367402 8_4:+5566950 Msa1309130:intron
GTTCTTTGCTAGGAATTTCC+CGG 0.374040 8_4:+5567199 Msa1309130:CDS
GCGGTTCATGATTCATTAAC+GGG 0.378021 8_4:+5571689 Msa1309130:three_prime_UTR
AACCTTCCATAAAGCCTTAA+GGG 0.393515 8_4:-5566964 None:intergenic
CAACCTTCCATAAAGCCTTA+AGG 0.400193 8_4:-5566965 None:intergenic
GCCTCCCAACACCATTCTAA+TGG 0.401717 8_4:-5571495 None:intergenic
TAAGCCACGAAGTTCTTCTT+CGG 0.404370 8_4:-5566994 None:intergenic
ATCTACCTAAAATCTGTTGA+TGG 0.405572 8_4:-5567059 None:intergenic
CTGAGAGGATTGGATTGAAA+TGG 0.405961 8_4:-5563939 None:intergenic
TGCGGTTCATGATTCATTAA+CGG 0.407356 8_4:+5571688 Msa1309130:three_prime_UTR
AAGCCACGAAGTTCTTCTTC+GGG 0.407421 8_4:-5566993 None:intergenic
TTCGGAAGAAATCACCTCCT+TGG 0.411659 8_4:-5571449 None:intergenic
CTCTCCGATTCATTCATCTC+CGG 0.412516 8_4:+5564028 Msa1309130:five_prime_UTR
ATCGGAGCAGTGGAAGGAAA+TGG 0.419607 8_4:+5567019 Msa1309130:CDS
CAATCCTCAGGAGGAGTGCT+TGG 0.425788 8_4:+5566742 Msa1309130:intron
ATCTTAATTGTAAAATTGTC+GGG 0.426924 8_4:+5571617 Msa1309130:three_prime_UTR
AATCCTTCCAGGATCTGTTA+TGG 0.430424 8_4:+5567429 Msa1309130:CDS
TTCTATGCGTGCCTCATACA+TGG 0.433966 8_4:+5568529 Msa1309130:CDS
CCGGAAAATTGAGGTGTAAC+CGG 0.435693 8_4:-5564053 None:intergenic
TGCTTGTGCTTCCATTAGAA+TGG 0.438477 8_4:+5571484 Msa1309130:three_prime_UTR
TCGGAAGAAATCACCTCCTT+GGG 0.439612 8_4:-5571448 None:intergenic
TTAACACCAGCAACGGCAAA+CGG 0.441947 8_4:-5567485 None:intergenic
CAAGTATCGGTATGAGGATT+GGG 0.445429 8_4:-5564208 None:intergenic
AATCTTAATTGTAAAATTGT+CGG 0.449941 8_4:+5571616 Msa1309130:three_prime_UTR
TGCTTCCATTAGAATGGTGT+TGG 0.451852 8_4:+5571490 Msa1309130:three_prime_UTR
CCCGCTTCCATAACAGATCC+TGG 0.454139 8_4:-5567436 None:intergenic
AGAACTTCGTGGCTTAATAT+CGG 0.455601 8_4:+5567001 Msa1309130:CDS
GCAAGTATCGGTATGAGGAT+TGG 0.456828 8_4:-5564209 None:intergenic
AATTGAGGTGTAACCGGAAC+CGG 0.460916 8_4:-5564047 None:intergenic
TCGTGAAAGTAGTTTGTATG+AGG 0.464656 8_4:-5571195 None:intergenic
AATCGGAGAGAAACGGAATC+CGG 0.466157 8_4:-5564015 None:intergenic
TCTTGCTCATTTGTTTCTGA+AGG 0.470730 8_4:+5571762 Msa1309130:three_prime_UTR
ACATGATCATCATTATTAAA+CGG 0.478851 8_4:-5564086 None:intergenic
TCACATCACCGTTAAGCGTT+CGG 0.480693 8_4:-5571520 None:intergenic
TACATTGAAATCCATGTATG+AGG 0.482849 8_4:-5568540 None:intergenic
TGATTGAGATCTGAGAGGAT+TGG 0.484288 8_4:-5563949 None:intergenic
CTGCATAGCTTTCAAGCTGA+TGG 0.486549 8_4:+5568493 Msa1309130:CDS
GAATTGCAAGTATCGGTATG+AGG 0.487513 8_4:-5564214 None:intergenic
CTCCTAGAGTTTAGCTTCGA+AGG 0.493346 8_4:+5571247 Msa1309130:three_prime_UTR
GCTTAACGGTGATGTGAGCC+AGG 0.493769 8_4:+5571526 Msa1309130:three_prime_UTR
AAAATCTCGCCGGAAAATTG+AGG 0.496586 8_4:-5564062 None:intergenic
GCTTCGAAGGCCTTTGTGCA+TGG 0.498202 8_4:+5571260 Msa1309130:three_prime_UTR
GCTTCCATTAGAATGGTGTT+GGG 0.500199 8_4:+5571491 Msa1309130:three_prime_UTR
CCAGGATCTGTTATGGAAGC+GGG 0.507175 8_4:+5567436 Msa1309130:CDS
CGAATAGAAGTTCCATATGA+TGG 0.509767 8_4:+5566779 Msa1309130:CDS
TAACACCAGCAACGGCAAAC+GGG 0.511885 8_4:-5567484 None:intergenic
TACGTGTTTGTCAGGGGTGG+TGG 0.512647 8_4:+5567152 Msa1309130:intron
AATAAGAAAATGGATGATAG+AGG 0.513505 8_4:+5564160 Msa1309130:exon
TCGGAGCAGTGGAAGGAAAT+GGG 0.513871 8_4:+5567020 Msa1309130:CDS
CAAATTGTGGATGATATTGT+TGG 0.519036 8_4:+5571577 Msa1309130:three_prime_UTR
ATTGAAATGGAAGACAGTTA+CGG 0.520445 8_4:-5563926 None:intergenic
CAAGCAACAAATCATTCCTT+CGG 0.522815 8_4:-5571467 None:intergenic
TGCATGCTGAATGGCAGGCA+TGG 0.528272 8_4:-5571306 None:intergenic
CAGATGCTTGATCTTGAAGC+AGG 0.530750 8_4:+5567527 Msa1309130:CDS
TCCATTAGAATGGTGTTGGG+AGG 0.532876 8_4:+5571494 Msa1309130:three_prime_UTR
GGCCCTTAAGGCTTTATGGA+AGG 0.535713 8_4:+5566962 Msa1309130:CDS
TCCAGGATCTGTTATGGAAG+CGG 0.539765 8_4:+5567435 Msa1309130:CDS
CTTAATATCGGAGCAGTGGA+AGG 0.541259 8_4:+5567013 Msa1309130:CDS
CTAAACTCTAGGAGACTGAC+AGG 0.543478 8_4:-5571238 None:intergenic
GGAACCGGAGATGAATGAAT+CGG 0.548816 8_4:-5564032 None:intergenic
TATCTACTGTGTCTCAAACC+TGG 0.551915 8_4:-5571544 None:intergenic
TCAGCAGCATGGCTTGGTAG+AGG 0.553664 8_4:+5566038 Msa1309130:CDS
TCAACTATAGAACCATCATA+TGG 0.554157 8_4:-5566791 None:intergenic
GCAGGATCAGCAGCATGGCT+TGG 0.554647 8_4:+5566032 Msa1309130:CDS
TTTCCCGAAGAAGAACTTCG+TGG 0.555604 8_4:+5566990 Msa1309130:CDS
CAGAGAAGAGATAGCGACGC+GGG 0.556319 8_4:+5566080 Msa1309130:CDS
GGAAGGAAATGGGTTGGCAA+GGG 0.557960 8_4:+5567030 Msa1309130:CDS
GGAAATGGGTTGGCAAGGGA+AGG 0.561744 8_4:+5567034 Msa1309130:CDS
AGAATTAGAATTGCAAGTAT+CGG 0.564521 8_4:-5564221 None:intergenic
TCAAGCTGATGGATCACCAA+TGG 0.564603 8_4:+5568504 Msa1309130:CDS
GTTATTGCATGCTGAATGGC+AGG 0.566424 8_4:-5571311 None:intergenic
ATGAATGAATCGGAGAGAAA+CGG 0.567302 8_4:-5564022 None:intergenic
TGGAAGGAAATGGGTTGGCA+AGG 0.569053 8_4:+5567029 Msa1309130:CDS
TGGTTCTATAGTTGAGCACC+AGG 0.582856 8_4:+5566799 Msa1309130:CDS
GGCCTTCGAAGCTAAACTCT+AGG 0.583457 8_4:-5571249 None:intergenic
AAATGTTATTGCATGCTGAA+TGG 0.583836 8_4:-5571315 None:intergenic
AGCAGTGGAAGGAAATGGGT+TGG 0.590956 8_4:+5567024 Msa1309130:CDS
CGTGAAAGTAGTTTGTATGA+GGG 0.600468 8_4:-5571194 None:intergenic
AGGCACGCATAGAAAGCCAT+TGG 0.608578 8_4:-5568520 None:intergenic
ATTAAACGGTAAAATCTCGC+CGG 0.616282 8_4:-5564072 None:intergenic
GAGACAACGCTAATTCAGCT+TGG 0.619783 8_4:-5563877 None:intergenic
GTGGCTTAATATCGGAGCAG+TGG 0.619933 8_4:+5567009 Msa1309130:CDS
AAGGAGGTGATTTCTTCCGA+AGG 0.620784 8_4:+5571451 Msa1309130:three_prime_UTR
CTTGCAGTATTGTATTTCAG+CGG 0.620784 8_4:+5571721 Msa1309130:three_prime_UTR
CTTCCATAACAGATCCTGGA+AGG 0.623421 8_4:-5567432 None:intergenic
TGTGATGTTAACACCAGCAA+CGG 0.623780 8_4:-5567492 None:intergenic
GGCAAACGGGTACTCCCACA+CGG 0.625303 8_4:-5567471 None:intergenic
CTGTTGCAGGATCAGCAGCA+TGG 0.627647 8_4:+5566027 Msa1309130:CDS
GGAAGGAGATCGTTCCGTGT+GGG 0.632019 8_4:+5567457 Msa1309130:CDS
TGTTAACATCACATTCATGC+TGG 0.645069 8_4:+5567502 Msa1309130:CDS
GGGTTTGATTGAGATCTGAG+AGG 0.652178 8_4:-5563954 None:intergenic
CTCAGGAGGAGTGCTTGGAG+AGG 0.653461 8_4:+5566747 Msa1309130:intron
AGTTGCTTGCTGCTTCACAA+CGG 0.658520 8_4:-5563899 None:intergenic
GGGAAGGAGATCGTTCCGTG+TGG 0.666337 8_4:+5567456 Msa1309130:CDS
AGCACAGAGTCCATGCACAA+AGG 0.667410 8_4:-5571270 None:intergenic
GATCTGTTATGGAAGCGGGA+AGG 0.674343 8_4:+5567440 Msa1309130:CDS
TTAATGAATCATGAACCGCA+AGG 0.716239 8_4:-5571685 None:intergenic
ACAGAGAAGAGATAGCGACG+CGG 0.810969 8_4:+5566079 Msa1309130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG + chr8_4:5567623-5567642 Msa1309130:intron 0.0%
!! ATATATATATATATATATAT+GGG + chr8_4:5567624-5567643 Msa1309130:intron 0.0%
!! TATATATATATATATATATA+GGG - chr8_4:5567623-5567642 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr8_4:5567624-5567643 None:intergenic 0.0%
!! AGAAAAAAAAACAAAAAAAA+TGG - chr8_4:5564304-5564323 None:intergenic 10.0%
!! TAATTATAAAAATATTACCT+GGG - chr8_4:5566129-5566148 None:intergenic 10.0%
!! TTAATTATAAAAATATTACC+TGG - chr8_4:5566130-5566149 None:intergenic 10.0%
!! AAAAATCGTAAAAAAAAATT+CGG - chr8_4:5569465-5569484 None:intergenic 10.0%
!! AAAAATCGTAAAAAAAAATT+CGG - chr8_4:5569465-5569484 None:intergenic 10.0%
!! AAAAATGCTATTAAAATTAA+GGG - chr8_4:5570385-5570404 None:intergenic 10.0%
!! TAAAAATGCTATTAAAATTA+AGG - chr8_4:5570384-5570403 None:intergenic 10.0%
!! ATTTGAATAAAATCCTAAAA+AGG - chr8_4:5564645-5564664 None:intergenic 15.0%
!! AAATTCAATTGTATTATTCA+TGG + chr8_4:5564724-5564743 Msa1309130:intron 15.0%
!!! AAGATTTATTTTTCGATATT+TGG - chr8_4:5566367-5566386 None:intergenic 15.0%
!! GTATCAATAAAAATCATTAA+CGG - chr8_4:5567135-5567154 None:intergenic 15.0%
!!! ATTTGTTTGTTTTTTTGTAT+TGG + chr8_4:5567321-5567340 Msa1309130:intron 15.0%
!! AATAGAGAAATTATAATAAC+AGG - chr8_4:5567565-5567584 None:intergenic 15.0%
!! TATATATCCTTTGTTAAATT+TGG - chr8_4:5568615-5568634 None:intergenic 15.0%
!!! TAAGGTGAAAAATATATTTT+TGG + chr8_4:5569061-5569080 Msa1309130:intron 15.0%
!!! TTTAGTCCTTAATTAATTTT+AGG + chr8_4:5569205-5569224 Msa1309130:intron 15.0%
!!! TTAGTCCTTAATTAATTTTA+GGG + chr8_4:5569206-5569225 Msa1309130:intron 15.0%
!!! TTTTACCCTAAAATTAATTA+AGG - chr8_4:5569214-5569233 None:intergenic 15.0%
!! AAAATCGTAAAAAAAAATTC+GGG - chr8_4:5569464-5569483 None:intergenic 15.0%
!! AAAATCGTAAAAAAAAATTC+GGG - chr8_4:5569464-5569483 None:intergenic 15.0%
!! TAAGGAAAAAAAAATAAGTT+AGG + chr8_4:5569774-5569793 Msa1309130:intron 15.0%
!! AAGGAAAAAAAAATAAGTTA+GGG + chr8_4:5569775-5569794 Msa1309130:intron 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr8_4:5570296-5570315 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG + chr8_4:5570196-5570215 Msa1309130:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG + chr8_4:5570388-5570407 Msa1309130:intron 15.0%
!!! AGAAAATATTTTATCAAACA+AGG + chr8_4:5570722-5570741 Msa1309130:intron 15.0%
!!! TTATAAGGTATAAAAGTATA+AGG - chr8_4:5570751-5570770 None:intergenic 15.0%
!! TAATTCTTATCTTAGTTATA+AGG - chr8_4:5570766-5570785 None:intergenic 15.0%
!! TAAAAATACTTGAACTTATA+GGG + chr8_4:5570864-5570883 Msa1309130:intron 15.0%
!!! ATTTTAATGATGATAAATGT+CGG - chr8_4:5570975-5570994 None:intergenic 15.0%
!! TAATATAACTATTAATGTTC+TGG + chr8_4:5571096-5571115 Msa1309130:intron 15.0%
!! AATCTTAATTGTAAAATTGT+CGG + chr8_4:5571616-5571635 Msa1309130:three_prime_UTR 15.0%
!! ACATGATCATCATTATTAAA+CGG - chr8_4:5564089-5564108 None:intergenic 20.0%
!! AACAAAAAAAATGGAGAAAA+TGG - chr8_4:5564295-5564314 None:intergenic 20.0%
!! CTACAAAAAAAAAAAAACTC+TGG - chr8_4:5566240-5566259 None:intergenic 20.0%
!! CAGAATTTCATAAGATAAAA+GGG - chr8_4:5566542-5566561 None:intergenic 20.0%
!! GATTGAAAATTCAACATTAT+GGG - chr8_4:5566727-5566746 None:intergenic 20.0%
!! AACAAAAACTATGAATACAT+AGG - chr8_4:5566874-5566893 None:intergenic 20.0%
!! AACCAAAAAATAAATCATAC+CGG - chr8_4:5567221-5567240 None:intergenic 20.0%
!! ATTGTAACGAATAAATAACT+TGG + chr8_4:5567257-5567276 Msa1309130:intron 20.0%
!! TTGTAACGAATAAATAACTT+GGG + chr8_4:5567258-5567277 Msa1309130:intron 20.0%
!!! TACAGAGTATAATAAGTTTT+AGG - chr8_4:5567400-5567419 None:intergenic 20.0%
!! AAGTTAATAAATACACCTTA+AGG + chr8_4:5567715-5567734 Msa1309130:intron 20.0%
!! TATGTCATTATTAATGATCT+TGG - chr8_4:5568152-5568171 None:intergenic 20.0%
!!! TTTTGATCCATAAAAAAATC+GGG - chr8_4:5568327-5568346 None:intergenic 20.0%
!!! CTTTTGATCCATAAAAAAAT+CGG - chr8_4:5568328-5568347 None:intergenic 20.0%
!!! ATTTTTTTATGGATCAAAAG+AGG + chr8_4:5568328-5568347 Msa1309130:intron 20.0%
!!! GTAAATTTGATTTACGTTTA+TGG + chr8_4:5568805-5568824 Msa1309130:intron 20.0%
!!! CAAACTTATTTGAGTTTAAA+GGG - chr8_4:5568837-5568856 None:intergenic 20.0%
!!! ACAAACTTATTTGAGTTTAA+AGG - chr8_4:5568838-5568857 None:intergenic 20.0%
!!! AGAGAGGTTTTAAAAAATTT+AGG + chr8_4:5568946-5568965 Msa1309130:intron 20.0%
!! TTAAAATGTAGAAATTCACT+AGG + chr8_4:5569032-5569051 Msa1309130:intron 20.0%
!! TAAAATGTAGAAATTCACTA+GGG + chr8_4:5569033-5569052 Msa1309130:intron 20.0%
!! TAAATGACTATCAATGTATA+TGG - chr8_4:5569088-5569107 None:intergenic 20.0%
!! ATTGCAAATTGTTTCATATA+AGG - chr8_4:5569120-5569139 None:intergenic 20.0%
!! TTTATTTCCTAATTTCCTAT+AGG + chr8_4:5569139-5569158 Msa1309130:intron 20.0%
!! TTATTTCCTAATTTCCTATA+GGG + chr8_4:5569140-5569159 Msa1309130:intron 20.0%
!! AACAAAAAAAAAATAAGCCA+GGG - chr8_4:5569408-5569427 None:intergenic 20.0%
!! AAACAAAAAAAAAATAAGCC+AGG - chr8_4:5569409-5569428 None:intergenic 20.0%
!!! CTGAAAAAACTGAAATTTTT+CGG - chr8_4:5569491-5569510 None:intergenic 20.0%
!!! CTGAAAAAACTGAAATTTTT+CGG - chr8_4:5569491-5569510 None:intergenic 20.0%
!! AGGAAAAAAAAATAAGTTAG+GGG + chr8_4:5569776-5569795 Msa1309130:intron 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG + chr8_4:5570231-5570250 Msa1309130:intron 20.0%
!! TAAACAAATTTGAATTGAGT+AGG + chr8_4:5570325-5570344 Msa1309130:intron 20.0%
!! AAACAAATTTGAATTGAGTA+GGG + chr8_4:5570326-5570345 Msa1309130:intron 20.0%
!!! CAAATTTAAAACTTGCATAT+AGG - chr8_4:5570468-5570487 None:intergenic 20.0%
!!! CTATATGCAAGTTTTAAATT+TGG + chr8_4:5570466-5570485 Msa1309130:intron 20.0%
!! AAATGTCTTAAATGAGTTTA+AGG - chr8_4:5570493-5570512 None:intergenic 20.0%
!!! AAGTTTTCAAAGATTTGTAT+AGG - chr8_4:5570655-5570674 None:intergenic 20.0%
!! GTAAAAATACTTGAACTTAT+AGG + chr8_4:5570863-5570882 Msa1309130:intron 20.0%
!!! TTGTAATCTTTTTCATGAAT+AGG + chr8_4:5570893-5570912 Msa1309130:intron 20.0%
!! CAAATAAAATTGTCATGAAT+AGG + chr8_4:5570923-5570942 Msa1309130:intron 20.0%
!! ATCTTAATTGTAAAATTGTC+GGG + chr8_4:5571617-5571636 Msa1309130:three_prime_UTR 20.0%
!!! GTTAGATTTTTAATGAATTG+TGG + chr8_4:5571641-5571660 Msa1309130:three_prime_UTR 20.0%
! GAAGAAGAAGAATAAGAAAA+TGG + chr8_4:5564150-5564169 Msa1309130:exon 25.0%
! AATAAGAAAATGGATGATAG+AGG + chr8_4:5564160-5564179 Msa1309130:exon 25.0%
! AGAATTAGAATTGCAAGTAT+CGG - chr8_4:5564224-5564243 None:intergenic 25.0%
!! TGATGGATGAATCTAAAATA+TGG - chr8_4:5564402-5564421 None:intergenic 25.0%
! TTCTATTCTATTCTGATGAT+TGG + chr8_4:5564464-5564483 Msa1309130:intron 25.0%
! TAAAATCCTAAAAAGGTAAC+TGG - chr8_4:5564638-5564657 None:intergenic 25.0%
! TTGCTTATGTGAATGTTATT+GGG - chr8_4:5565081-5565100 None:intergenic 25.0%
!! TACCATGATTTTATAGAAAC+TGG + chr8_4:5565273-5565292 Msa1309130:intron 25.0%
!! ACCATGATTTTATAGAAACT+GGG + chr8_4:5565274-5565293 Msa1309130:intron 25.0%
! ACATCATGCATATAACAATA+TGG - chr8_4:5565665-5565684 None:intergenic 25.0%
!!! ATCTTTTGAAGATGATAAGT+GGG + chr8_4:5565790-5565809 Msa1309130:intron 25.0%
! TATGAAAGACAAACAAGAAA+AGG - chr8_4:5566413-5566432 None:intergenic 25.0%
! TGTCTTTCATATTGTGTATA+TGG + chr8_4:5566422-5566441 Msa1309130:intron 25.0%
!! ATGCAAGAAAATACAGTTTT+TGG + chr8_4:5566453-5566472 Msa1309130:intron 25.0%
!!! CTAATCAGTTTTTAGTTTAG+TGG + chr8_4:5566498-5566517 Msa1309130:intron 25.0%
! CCAGAATTTCATAAGATAAA+AGG - chr8_4:5566543-5566562 None:intergenic 25.0%
!! CCTTTTATCTTATGAAATTC+TGG + chr8_4:5566540-5566559 Msa1309130:intron 25.0%
!! AACATTATGGGAAAATTTTG+AGG - chr8_4:5566715-5566734 None:intergenic 25.0%
! GGATTGAAAATTCAACATTA+TGG - chr8_4:5566728-5566747 None:intergenic 25.0%
! ATTGTAATAGAAATGATACC+TGG - chr8_4:5566820-5566839 None:intergenic 25.0%
! GACTTTAATGTACATATTAC+AGG + chr8_4:5566938-5566957 Msa1309130:intron 25.0%
! TTTAATGTACATATTACAGG+AGG + chr8_4:5566941-5566960 Msa1309130:intron 25.0%
! ACCAAAAAATAAATCATACC+GGG - chr8_4:5567220-5567239 None:intergenic 25.0%
! AATCAAAGTTTACTATGGAA+AGG + chr8_4:5567289-5567308 Msa1309130:intron 25.0%
! GCAAGTGAATAACTAAAAAA+TGG + chr8_4:5567847-5567866 Msa1309130:intron 25.0%
!!! GTTTTGTTATTTCATCTATC+TGG - chr8_4:5568036-5568055 None:intergenic 25.0%
!!! AACAAAACTGTTTTGAAGTT+AGG + chr8_4:5568048-5568067 Msa1309130:intron 25.0%
!!! ACAAAACTGTTTTGAAGTTA+GGG + chr8_4:5568049-5568068 Msa1309130:intron 25.0%
!!! ACTTTTCTAAAGTTTCTTGA+AGG + chr8_4:5568285-5568304 Msa1309130:intron 25.0%
! TTTGATCCATAAAAAAATCG+GGG - chr8_4:5568326-5568345 None:intergenic 25.0%
! TAAATCTATTCATGTTTGTC+TGG + chr8_4:5568439-5568458 Msa1309130:intron 25.0%
! TAGAAATAGGGAAAATAGTA+TGG + chr8_4:5568584-5568603 Msa1309130:intron 25.0%
! AAAGACATAATCTCTTGATA+TGG + chr8_4:5568901-5568920 Msa1309130:intron 25.0%
!! ATTGATAGTCATTTAAACTC+CGG + chr8_4:5569093-5569112 Msa1309130:intron 25.0%
! AAATTGTTTCATATAAGGAC+CGG - chr8_4:5569115-5569134 None:intergenic 25.0%
! AATTAACCCTATAGGAAATT+AGG - chr8_4:5569149-5569168 None:intergenic 25.0%
! AGAAACATAATTAACCCTAT+AGG - chr8_4:5569157-5569176 None:intergenic 25.0%
! AATTAAGGACTAAACTTACA+AGG - chr8_4:5569199-5569218 None:intergenic 25.0%
!! TCAAGTGATTAACTTTTACA+GGG - chr8_4:5569874-5569893 None:intergenic 25.0%
!! TTCAAGTGATTAACTTTTAC+AGG - chr8_4:5569873-5569892 None:intergenic 25.0%
! ACAAAAAAAAAATAAGCCAG+GGG - chr8_4:5569407-5569426 None:intergenic 25.0%
!! TTCAAGTGATTAACTTTTAC+AGG + chr8_4:5569873-5569892 Msa1309130:intron 25.0%
!! TCAAGTGATTAACTTTTACA+GGG + chr8_4:5569874-5569893 Msa1309130:intron 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG - chr8_4:5570036-5570055 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG - chr8_4:5570037-5570056 None:intergenic 25.0%
! AGGGCAAAAAAACAAAATTA+GGG + chr8_4:5570359-5570378 Msa1309130:intron 25.0%
! TAAAACTTGCATATAGGAAA+GGG - chr8_4:5570462-5570481 None:intergenic 25.0%
! TTAAAACTTGCATATAGGAA+AGG - chr8_4:5570463-5570482 None:intergenic 25.0%
! CAAAGATTTGTATAGGAATT+AGG - chr8_4:5570648-5570667 None:intergenic 25.0%
!! ATGACATGATATTTTCTCTT+TGG - chr8_4:5570680-5570699 None:intergenic 25.0%
!! GAACCACAAAAACATTTTAA+TGG + chr8_4:5570945-5570964 Msa1309130:intron 25.0%
!!! TCTCCATTAAAATGTTTTTG+TGG - chr8_4:5570951-5570970 None:intergenic 25.0%
!! AATCTAAAGCTAAGAAGTAA+AGG - chr8_4:5571058-5571077 None:intergenic 25.0%
!! ATAAGCTTTTAGTCAAATTG+TGG + chr8_4:5571564-5571583 Msa1309130:three_prime_UTR 25.0%
ATTGAAATGGAAGACAGTTA+CGG - chr8_4:5563929-5563948 None:intergenic 30.0%
GATACTTGCAATTCTAATTC+TGG + chr8_4:5564223-5564242 Msa1309130:CDS 30.0%
! GGATGAATCTAAAATATGGA+GGG - chr8_4:5564398-5564417 None:intergenic 30.0%
! TGGATGAATCTAAAATATGG+AGG - chr8_4:5564399-5564418 None:intergenic 30.0%
TAGTAAAAACAGAGCATATG+TGG - chr8_4:5564574-5564593 None:intergenic 30.0%
! TTGATTCCAGTTACCTTTTT+AGG + chr8_4:5564629-5564648 Msa1309130:intron 30.0%
CTCAAATTCTGATAGGAAAA+CGG + chr8_4:5564701-5564720 Msa1309130:intron 30.0%
ATCACAGTAACATGTTCATT+GGG - chr8_4:5564857-5564876 None:intergenic 30.0%
AATCACAGTAACATGTTCAT+TGG - chr8_4:5564858-5564877 None:intergenic 30.0%
AGTGCATAATTTGATTCTGT+GGG + chr8_4:5564905-5564924 Msa1309130:intron 30.0%
TAATTTGATTCTGTGGGATA+AGG + chr8_4:5564911-5564930 Msa1309130:intron 30.0%
AAAACAAACATCCACTTTGT+AGG + chr8_4:5564971-5564990 Msa1309130:intron 30.0%
TGCTTATGTGAATGTTATTG+GGG - chr8_4:5565080-5565099 None:intergenic 30.0%
GTTGCTTATGTGAATGTTAT+TGG - chr8_4:5565082-5565101 None:intergenic 30.0%
TCCCAGTTTCTATAAAATCA+TGG - chr8_4:5565278-5565297 None:intergenic 30.0%
!! TTGTAGCTTTAGCAAAATCA+CGG + chr8_4:5565359-5565378 Msa1309130:intron 30.0%
!!! CATGTGTTTGTCATTTTCTA+TGG - chr8_4:5565738-5565757 None:intergenic 30.0%
!! CATCTTTTGAAGATGATAAG+TGG + chr8_4:5565789-5565808 Msa1309130:intron 30.0%
CTAAAAATTTCATCCCAAGT+TGG - chr8_4:5565951-5565970 None:intergenic 30.0%
TTTCTTAGAGTCTTCATTGA+TGG + chr8_4:5565978-5565997 Msa1309130:intron 30.0%
TTCTTAGAGTCTTCATTGAT+GGG + chr8_4:5565979-5565998 Msa1309130:intron 30.0%
!!! ATTTTGTTTTATTGCAGCTG+AGG + chr8_4:5566004-5566023 Msa1309130:intron 30.0%
! TGGTTTCTTTTAGATTTTGC+TGG - chr8_4:5566220-5566239 None:intergenic 30.0%
! TTTTTGTAGAGCATGTGATA+TGG + chr8_4:5566251-5566270 Msa1309130:intron 30.0%
ATATTGTGTATATGGTCTGT+GGG + chr8_4:5566430-5566449 Msa1309130:intron 30.0%
! ATGTTGAATTTTCAATCCTC+AGG + chr8_4:5566730-5566749 Msa1309130:intron 30.0%
TCAACTATAGAACCATCATA+TGG - chr8_4:5566794-5566813 None:intergenic 30.0%
ATCTACCTAAAATCTGTTGA+TGG - chr8_4:5567062-5567081 None:intergenic 30.0%
ATTAAGATGAACACAAGATC+TGG - chr8_4:5567107-5567126 None:intergenic 30.0%
TTTATTGATACGTGTTTGTC+AGG + chr8_4:5567144-5567163 Msa1309130:intron 30.0%
TTATTGATACGTGTTTGTCA+GGG + chr8_4:5567145-5567164 Msa1309130:intron 30.0%
! AGAATTTTCTGTTCTTTGCT+AGG + chr8_4:5567189-5567208 Msa1309130:CDS 30.0%
!!! TCCCGGTATGATTTATTTTT+TGG + chr8_4:5567216-5567235 Msa1309130:intron 30.0%
! CCATAGTAAACTTTGATTTC+TGG - chr8_4:5567287-5567306 None:intergenic 30.0%
CCAGAAATCAAAGTTTACTA+TGG + chr8_4:5567284-5567303 Msa1309130:intron 30.0%
TTAGGATATAGATATGTGCA+TGG - chr8_4:5567382-5567401 None:intergenic 30.0%
TTATAGCAACATACACCTTA+AGG - chr8_4:5567733-5567752 None:intergenic 30.0%
ACCTTCTAACAAAAACAAGT+GGG + chr8_4:5567756-5567775 Msa1309130:intron 30.0%
! ACTCCTTCTAAAAAGTAAGT+GGG - chr8_4:5567821-5567840 None:intergenic 30.0%
! TACTCCTTCTAAAAAGTAAG+TGG - chr8_4:5567822-5567841 None:intergenic 30.0%
AAATGGTTAAATACACCCTA+AGG + chr8_4:5567864-5567883 Msa1309130:intron 30.0%
TCAGCATATGTAACATTGAA+AGG - chr8_4:5568078-5568097 None:intergenic 30.0%
TTGCATAAATCAGTACAGAA+AGG + chr8_4:5568108-5568127 Msa1309130:intron 30.0%
TACATTGAAATCCATGTATG+AGG - chr8_4:5568543-5568562 None:intergenic 30.0%
TTCAAGATGCAGTTATAAGA+GGG - chr8_4:5568723-5568742 None:intergenic 30.0%
TTTCAAGATGCAGTTATAAG+AGG - chr8_4:5568724-5568743 None:intergenic 30.0%
ACATAATCTCTTGATATGGA+GGG + chr8_4:5568905-5568924 Msa1309130:intron 30.0%
AAATTCACTAGGGAGAAATA+AGG + chr8_4:5569043-5569062 Msa1309130:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr8_4:5570419-5570438 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr8_4:5570418-5570437 None:intergenic 30.0%
TCAAATGGCCTATAATTACA+GGG - chr8_4:5569934-5569953 None:intergenic 30.0%
TTCAAATGGCCTATAATTAC+AGG - chr8_4:5569933-5569952 None:intergenic 30.0%
! AGCTGGGAAAAAAATTTTGA+AGG - chr8_4:5569437-5569456 None:intergenic 30.0%
AAAAAATTCGGGAAAAAGCT+GGG - chr8_4:5569453-5569472 None:intergenic 30.0%
AAAAAAATTCGGGAAAAAGC+TGG - chr8_4:5569454-5569473 None:intergenic 30.0%
AAAAAATTCGGGAGAAAACT+GGG - chr8_4:5569612-5569631 None:intergenic 30.0%
AAAAAAATTCGGGAGAAAAC+TGG - chr8_4:5569613-5569632 None:intergenic 30.0%
TTCAAATGGCCTATAATTAC+AGG + chr8_4:5569933-5569952 Msa1309130:intron 30.0%
TCAAATGGCCTATAATTACA+GGG + chr8_4:5569934-5569953 Msa1309130:intron 30.0%
CAAGATTAGAACACTATGAA+AGG + chr8_4:5570099-5570118 Msa1309130:intron 30.0%
CAGGGCAAAAAAACAAAATT+AGG + chr8_4:5570358-5570377 Msa1309130:intron 30.0%
AAGTAAGGACTAAACTTACA+AGG + chr8_4:5570403-5570422 Msa1309130:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + chr8_4:5570418-5570437 Msa1309130:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + chr8_4:5570419-5570438 Msa1309130:intron 30.0%
TCTTGTCAATCTCTGTTAAA+TGG + chr8_4:5570814-5570833 Msa1309130:intron 30.0%
GTTAAATGGCAATAAATGCA+AGG + chr8_4:5570828-5570847 Msa1309130:intron 30.0%
AAATGTTATTGCATGCTGAA+TGG - chr8_4:5571318-5571337 None:intergenic 30.0%
!!! TAGTGTTAGAAGTTTTGACT+CGG - chr8_4:5571349-5571368 None:intergenic 30.0%
CTGAAAAATAACAATTCCCA+AGG + chr8_4:5571432-5571451 Msa1309130:three_prime_UTR 30.0%
AAAAATAACAATTCCCAAGG+AGG + chr8_4:5571435-5571454 Msa1309130:three_prime_UTR 30.0%
CAAATTGTGGATGATATTGT+TGG + chr8_4:5571577-5571596 Msa1309130:three_prime_UTR 30.0%
ATGAATGAATCGGAGAGAAA+CGG - chr8_4:5564025-5564044 None:intergenic 35.0%
ATTAAACGGTAAAATCTCGC+CGG - chr8_4:5564075-5564094 None:intergenic 35.0%
AAAGAGAAAGAGAGAGAAAG+AGG - chr8_4:5564342-5564361 None:intergenic 35.0%
! GATGATATCCTAACTTGCAT+TGG + chr8_4:5564488-5564507 Msa1309130:intron 35.0%
! TTGATGGTAAACGAGATCTA+AGG - chr8_4:5564548-5564567 None:intergenic 35.0%
AGAGCATATGTGGAATTTGA+TGG - chr8_4:5564564-5564583 None:intergenic 35.0%
ATCAGAATTTGAGCTCTGTA+TGG - chr8_4:5564694-5564713 None:intergenic 35.0%
TACAGAGCTCAAATTCTGAT+AGG + chr8_4:5564694-5564713 Msa1309130:intron 35.0%
GTATTATTCATGGAAACCGT+TGG + chr8_4:5564734-5564753 Msa1309130:intron 35.0%
CATGTTACCAATTATGCCAA+CGG - chr8_4:5564753-5564772 None:intergenic 35.0%
!! AAAAGCTACACTTTTTAGCC+TGG + chr8_4:5564813-5564832 Msa1309130:intron 35.0%
CAGTGCATAATTTGATTCTG+TGG + chr8_4:5564904-5564923 Msa1309130:intron 35.0%
!! AAAGTGGATGTTTGTTTTCG+CGG - chr8_4:5564969-5564988 None:intergenic 35.0%
ATTTCGGTAAACCTACAAAG+TGG - chr8_4:5564985-5565004 None:intergenic 35.0%
ATGGCAGCTTATAGTGATTT+CGG - chr8_4:5565001-5565020 None:intergenic 35.0%
! AACTACACTTTTAGCCTGTT+TGG + chr8_4:5565230-5565249 Msa1309130:intron 35.0%
AACATGCATGTTTGGTATCA+CGG - chr8_4:5565392-5565411 None:intergenic 35.0%
TGCTTATGTGGATGTTAGAA+GGG - chr8_4:5565440-5565459 None:intergenic 35.0%
TTGCTTATGTGGATGTTAGA+AGG - chr8_4:5565441-5565460 None:intergenic 35.0%
TTAAGGGAGAATTGCTTATG+TGG - chr8_4:5565452-5565471 None:intergenic 35.0%
ACAATGACGTATTAGGATAC+CGG - chr8_4:5565514-5565533 None:intergenic 35.0%
AATTGCTTGTGTGGATGTTA+GGG - chr8_4:5565542-5565561 None:intergenic 35.0%
ATCGCATGGAAAAACTAGAA+TGG - chr8_4:5565688-5565707 None:intergenic 35.0%
! AGTTGATGTGGAGGAAAAAA+AGG - chr8_4:5565712-5565731 None:intergenic 35.0%
!! TTTCTATGGTAGAGTTGATG+TGG - chr8_4:5565724-5565743 None:intergenic 35.0%
CTGTGTATCTTAAGACAATG+TGG + chr8_4:5565820-5565839 Msa1309130:intron 35.0%
TATAGAGATGATCTGTGCTA+AGG + chr8_4:5565886-5565905 Msa1309130:intron 35.0%
! TCTTGCTTGTTAACCAACTT+GGG + chr8_4:5565935-5565954 Msa1309130:intron 35.0%
!!! TTTTGATTTAACTCTAGCCC+AGG + chr8_4:5566109-5566128 Msa1309130:CDS 35.0%
! AGAGCATGTGATATGGATTT+TGG + chr8_4:5566258-5566277 Msa1309130:intron 35.0%
! CAAGGAACATTTTGCAATCT+AGG + chr8_4:5566333-5566352 Msa1309130:intron 35.0%
CATATTGTGTATATGGTCTG+TGG + chr8_4:5566429-5566448 Msa1309130:intron 35.0%
AAAAGGGAGCTCAAGTATAT+TGG - chr8_4:5566526-5566545 None:intergenic 35.0%
! TTGAATTTTCAATCCTCAGG+AGG + chr8_4:5566733-5566752 Msa1309130:intron 35.0%
CGAATAGAAGTTCCATATGA+TGG + chr8_4:5566779-5566798 Msa1309130:CDS 35.0%
!! TACAGTCTTTTTAAGCAACG+TGG + chr8_4:5566842-5566861 Msa1309130:intron 35.0%
! CATAGTTTTTGTTCTTCCCA+TGG + chr8_4:5566881-5566900 Msa1309130:intron 35.0%
CACATATAGTAGTAAGCCAT+GGG - chr8_4:5566900-5566919 None:intergenic 35.0%
AACCTTCCATAAAGCCTTAA+GGG - chr8_4:5566967-5566986 None:intergenic 35.0%
AGAACTTCGTGGCTTAATAT+CGG + chr8_4:5567001-5567020 Msa1309130:CDS 35.0%
! AGGATCCATCAACAGATTTT+AGG + chr8_4:5567054-5567073 Msa1309130:CDS 35.0%
TATTGATACGTGTTTGTCAG+GGG + chr8_4:5567146-5567165 Msa1309130:intron 35.0%
ATGGTAACTGATTGGATCTA+AGG - chr8_4:5567363-5567382 None:intergenic 35.0%
ATATGTGCATGGTAACTGAT+TGG - chr8_4:5567371-5567390 None:intergenic 35.0%
TACTTTGTAGAAATCCTTCC+AGG + chr8_4:5567418-5567437 Msa1309130:intron 35.0%
TGTTAACATCACATTCATGC+TGG + chr8_4:5567502-5567521 Msa1309130:CDS 35.0%
!!! ACACCCACTAGTTTTTATGT+GGG + chr8_4:5567667-5567686 Msa1309130:intron 35.0%
ACTCCCACATAAAAACTAGT+GGG - chr8_4:5567904-5567923 None:intergenic 35.0%
CACCTTCTAACAAAAACAAG+TGG + chr8_4:5567755-5567774 Msa1309130:intron 35.0%
!!! ACCCACTTGTTTTTGTTAGA+AGG - chr8_4:5567760-5567779 None:intergenic 35.0%
TGTGTTCTAGCAAATCCTAT+AGG + chr8_4:5567779-5567798 Msa1309130:intron 35.0%
GTGTTCTAGCAAATCCTATA+GGG + chr8_4:5567780-5567799 Msa1309130:intron 35.0%
TGTTCTAGCAAATCCTATAG+GGG + chr8_4:5567781-5567800 Msa1309130:intron 35.0%
!!! ACACCCACTTACTTTTTAGA+AGG + chr8_4:5567815-5567834 Msa1309130:intron 35.0%
TTTAGCAAAGCTACACCTTA+GGG - chr8_4:5567882-5567901 None:intergenic 35.0%
! TTTTAGCAAAGCTACACCTT+AGG - chr8_4:5567883-5567902 None:intergenic 35.0%
ACTCCCACATAAAAACTAGT+GGG + chr8_4:5567904-5567923 Msa1309130:intron 35.0%
!!! ACACCCACTAGTTTTTATGT+GGG - chr8_4:5567667-5567686 None:intergenic 35.0%
CACAAGGATTAGAAACAGAA+GGG - chr8_4:5567994-5568013 None:intergenic 35.0%
TCACAAGGATTAGAAACAGA+AGG - chr8_4:5567995-5568014 None:intergenic 35.0%
TCGGCAAAATTAACATCACA+AGG - chr8_4:5568010-5568029 None:intergenic 35.0%
! TTGTGATGTTAATTTTGCCG+AGG + chr8_4:5568009-5568028 Msa1309130:intron 35.0%
TATTTCATCTATCTGGTCCT+CGG - chr8_4:5568029-5568048 None:intergenic 35.0%
GCATATGTAACATTGAAAGG+TGG - chr8_4:5568075-5568094 None:intergenic 35.0%
ATCCATAAAAAAATCGGGGA+TGG - chr8_4:5568322-5568341 None:intergenic 35.0%
ATTTCTACGAGCTGTGATTA+AGG - chr8_4:5568571-5568590 None:intergenic 35.0%
TAATCACAGCTCGTAGAAAT+AGG + chr8_4:5568571-5568590 Msa1309130:intron 35.0%
AATCACAGCTCGTAGAAATA+GGG + chr8_4:5568572-5568591 Msa1309130:intron 35.0%
GGCTCAACCAAATTTAACAA+AGG + chr8_4:5568605-5568624 Msa1309130:intron 35.0%
! TTTTGTGCGATTTCTCCTTT+CGG - chr8_4:5568870-5568889 None:intergenic 35.0%
GACATAATCTCTTGATATGG+AGG + chr8_4:5568904-5568923 Msa1309130:intron 35.0%
GGTATATTTGAAGACTAGAG+AGG + chr8_4:5568930-5568949 Msa1309130:intron 35.0%
! CTTTTCGTCCCTGTAATTAT+AGG + chr8_4:5569238-5569257 Msa1309130:intron 35.0%
! AACTTTTACAGGGACGAAAT+GGG - chr8_4:5569884-5569903 None:intergenic 35.0%
! TAACTTTTACAGGGACGAAA+TGG - chr8_4:5569883-5569902 None:intergenic 35.0%
!!! ATTTTGGTAATTTGCTGACG+TGG - chr8_4:5569821-5569840 None:intergenic 35.0%
ACGTCAGCAAATTACCAAAA+TGG + chr8_4:5569361-5569380 Msa1309130:intron 35.0%
AGCAAATTACCAAAATGGCA+TGG + chr8_4:5569366-5569385 Msa1309130:intron 35.0%
GCAAATTACCAAAATGGCAT+GGG + chr8_4:5569367-5569386 Msa1309130:intron 35.0%
GCAAATTACCAAAATGGCAT+GGG - chr8_4:5569367-5569386 None:intergenic 35.0%
AGCAAATTACCAAAATGGCA+TGG - chr8_4:5569366-5569385 None:intergenic 35.0%
ACGTCAGCAAATTACCAAAA+TGG - chr8_4:5569361-5569380 None:intergenic 35.0%
!!! ATTTTGGTAATTTGCTGACG+TGG + chr8_4:5569821-5569840 Msa1309130:intron 35.0%
! TAACTTTTACAGGGACGAAA+TGG + chr8_4:5569883-5569902 Msa1309130:intron 35.0%
! AACTTTTACAGGGACGAAAT+GGG + chr8_4:5569884-5569903 Msa1309130:intron 35.0%
! CTTTTCGTCCCTGTAATTAT+AGG - chr8_4:5569238-5569257 None:intergenic 35.0%
!!! TTTGCGATAATTTTTTGCGG+AGG + chr8_4:5570234-5570253 Msa1309130:intron 35.0%
TGGCAATAAATGCAAGGATA+AGG + chr8_4:5570834-5570853 Msa1309130:intron 35.0%
! CGTGAAAGTAGTTTGTATGA+GGG - chr8_4:5571197-5571216 None:intergenic 35.0%
! TCGTGAAAGTAGTTTGTATG+AGG - chr8_4:5571198-5571217 None:intergenic 35.0%
CAAGCAACAAATCATTCCTT+CGG - chr8_4:5571470-5571489 None:intergenic 35.0%
TTAATGAATCATGAACCGCA+AGG - chr8_4:5571688-5571707 None:intergenic 35.0%
TGCGGTTCATGATTCATTAA+CGG + chr8_4:5571688-5571707 Msa1309130:three_prime_UTR 35.0%
CTTGCAGTATTGTATTTCAG+CGG + chr8_4:5571721-5571740 Msa1309130:three_prime_UTR 35.0%
!! TCTTGCTCATTTGTTTCTGA+AGG + chr8_4:5571762-5571781 Msa1309130:three_prime_UTR 35.0%
CTGAGAGGATTGGATTGAAA+TGG - chr8_4:5563942-5563961 None:intergenic 40.0%
TGATTGAGATCTGAGAGGAT+TGG - chr8_4:5563952-5563971 None:intergenic 40.0%
AGAGAGAAGGAGAAGAGTTA+GGG - chr8_4:5563977-5563996 None:intergenic 40.0%
AAAATCTCGCCGGAAAATTG+AGG - chr8_4:5564065-5564084 None:intergenic 40.0%
!! CAAGTATCGGTATGAGGATT+GGG - chr8_4:5564211-5564230 None:intergenic 40.0%
!! GAATTGCAAGTATCGGTATG+AGG - chr8_4:5564217-5564236 None:intergenic 40.0%
TTGACGAACCAATGCAAGTT+AGG - chr8_4:5564499-5564518 None:intergenic 40.0%
ATGGAAACCGTTGGCATAAT+TGG + chr8_4:5564743-5564762 Msa1309130:intron 40.0%
! CGTTGGCATAATTGGTAACA+TGG + chr8_4:5564751-5564770 Msa1309130:intron 40.0%
! TGGCATAATTGGTAACATGG+CGG + chr8_4:5564754-5564773 Msa1309130:intron 40.0%
!! ACTTTTTAGCCTGGTTGGTT+TGG + chr8_4:5564822-5564841 Msa1309130:intron 40.0%
CAATTTGCCTCCCCTATATA+CGG + chr8_4:5565046-5565065 Msa1309130:intron 40.0%
GGATAGACAACCGTATATAG+GGG - chr8_4:5565059-5565078 None:intergenic 40.0%
GGGATAGACAACCGTATATA+GGG - chr8_4:5565060-5565079 None:intergenic 40.0%
TTCGAGCCTAAGCTGAATAA+AGG - chr8_4:5565130-5565149 None:intergenic 40.0%
ACGACAGCTTTACCAGAATA+AGG + chr8_4:5565183-5565202 Msa1309130:intron 40.0%
CGACAGCTTTACCAGAATAA+GGG + chr8_4:5565184-5565203 Msa1309130:intron 40.0%
AGCTTTACCAGAATAAGGGT+GGG + chr8_4:5565188-5565207 Msa1309130:intron 40.0%
! CACTTTTAGCCTGTTTGGTT+TGG + chr8_4:5565235-5565254 Msa1309130:intron 40.0%
!!! TTTTAGCCTGTTTGGTTTGG+TGG + chr8_4:5565238-5565257 Msa1309130:intron 40.0%
!! GCATATGTTTGCTATTGCAG+TGG - chr8_4:5565338-5565357 None:intergenic 40.0%
!! TAGCTTTAGCAAAATCACGG+TGG + chr8_4:5565362-5565381 Msa1309130:intron 40.0%
CATGTTCCCTCTCCTATATA+TGG + chr8_4:5565406-5565425 Msa1309130:intron 40.0%
AGACGACCATATATAGGAGA+GGG - chr8_4:5565415-5565434 None:intergenic 40.0%
TAGACGACCATATATAGGAG+AGG - chr8_4:5565416-5565435 None:intergenic 40.0%
GCTTATGTGGATGTTAGAAG+GGG - chr8_4:5565439-5565458 None:intergenic 40.0%
GTGCTGAGTAGCAAAGTTAA+GGG - chr8_4:5565468-5565487 None:intergenic 40.0%
TTGCTACTCAGCACCTTTAT+TGG + chr8_4:5565474-5565493 Msa1309130:intron 40.0%
TGCTACTCAGCACCTTTATT+GGG + chr8_4:5565475-5565494 Msa1309130:intron 40.0%
TCAGCACCTTTATTGGGTTT+AGG + chr8_4:5565481-5565500 Msa1309130:intron 40.0%
TTCGAGCCTAAACCCAATAA+AGG - chr8_4:5565490-5565509 None:intergenic 40.0%
CAATGACGTATTAGGATACC+GGG - chr8_4:5565513-5565532 None:intergenic 40.0%
GGGATAGACAATGACGTATT+AGG - chr8_4:5565521-5565540 None:intergenic 40.0%
ATTGCTTGTGTGGATGTTAG+GGG - chr8_4:5565541-5565560 None:intergenic 40.0%
CAATTGCTTGTGTGGATGTT+AGG - chr8_4:5565543-5565562 None:intergenic 40.0%
!! GCTAATAAAGGTGCTGAGTA+CGG - chr8_4:5565577-5565596 None:intergenic 40.0%
!! TCAGCACCTTTATTAGCCTT+AGG + chr8_4:5565580-5565599 Msa1309130:intron 40.0%
TTCGAGCCTAAGGCTAATAA+AGG - chr8_4:5565589-5565608 None:intergenic 40.0%
GCACAGATCATCTCTATACT+TGG - chr8_4:5565884-5565903 None:intergenic 40.0%
! CTCTTGCTTGTTAACCAACT+TGG + chr8_4:5565934-5565953 Msa1309130:intron 40.0%
! CATCGTCTACACTGATTACA+AGG + chr8_4:5566315-5566334 Msa1309130:intron 40.0%
GCACATATAGTAGTAAGCCA+TGG - chr8_4:5566901-5566920 None:intergenic 40.0%
CAACCTTCCATAAAGCCTTA+AGG - chr8_4:5566968-5566987 None:intergenic 40.0%
TAAGCCACGAAGTTCTTCTT+CGG - chr8_4:5566997-5567016 None:intergenic 40.0%
!!! GGGTGGTGGTTTTATTTCTT+TGG + chr8_4:5567166-5567185 Msa1309130:CDS 40.0%
GTTCTTTGCTAGGAATTTCC+CGG + chr8_4:5567199-5567218 Msa1309130:CDS 40.0%
AATCCTTCCAGGATCTGTTA+TGG + chr8_4:5567429-5567448 Msa1309130:CDS 40.0%
TGTGATGTTAACACCAGCAA+CGG - chr8_4:5567495-5567514 None:intergenic 40.0%
!!! CACACCCACTAGTTTTTATG+TGG + chr8_4:5567666-5567685 Msa1309130:intron 40.0%
CACTCCCACATAAAAACTAG+TGG - chr8_4:5567903-5567922 None:intergenic 40.0%
! AAATCCTATAGGGGTTTGCT+AGG + chr8_4:5567790-5567809 Msa1309130:intron 40.0%
CACTCCCACATAAAAACTAG+TGG + chr8_4:5567903-5567922 Msa1309130:intron 40.0%
!!! CACACCCACTAGTTTTTATG+TGG - chr8_4:5567666-5567685 None:intergenic 40.0%
!!! CTCCATCCCCGATTTTTTTA+TGG + chr8_4:5568317-5568336 Msa1309130:intron 40.0%
AATCTCTTGATATGGAGGGA+AGG + chr8_4:5568909-5568928 Msa1309130:intron 40.0%
! CAGAAGTAAAGTACTCTGCA+TGG + chr8_4:5568970-5568989 Msa1309130:intron 40.0%
! TACTCTGCATGGCATTTTAG+TGG + chr8_4:5568981-5569000 Msa1309130:intron 40.0%
!! ACTCTGCATGGCATTTTAGT+GGG + chr8_4:5568982-5569001 Msa1309130:intron 40.0%
AAGAGAATCACCATGACAGT+CGG - chr8_4:5569011-5569030 None:intergenic 40.0%
CTCAGGGACGAAAATTCAAA+TGG - chr8_4:5569919-5569938 None:intergenic 40.0%
TGACGTGGCAGTGATTAAAA+GGG - chr8_4:5569836-5569855 None:intergenic 40.0%
TGACGTGGCAGTGATTAAAA+GGG + chr8_4:5569836-5569855 Msa1309130:intron 40.0%
CTCAGGGACGAAAATTCAAA+TGG + chr8_4:5569919-5569938 Msa1309130:intron 40.0%
TTGAGTAGGGACTAATACTC+AGG + chr8_4:5570339-5570358 Msa1309130:intron 40.0%
TGAGTAGGGACTAATACTCA+GGG + chr8_4:5570340-5570359 Msa1309130:intron 40.0%
AGAGAGATGAGAGATTGTCT+TGG + chr8_4:5570995-5571014 Msa1309130:intron 40.0%
TGCTTGTGCTTCCATTAGAA+TGG + chr8_4:5571484-5571503 Msa1309130:three_prime_UTR 40.0%
TGCTTCCATTAGAATGGTGT+TGG + chr8_4:5571490-5571509 Msa1309130:three_prime_UTR 40.0%
GCTTCCATTAGAATGGTGTT+GGG + chr8_4:5571491-5571510 Msa1309130:three_prime_UTR 40.0%
TATCTACTGTGTCTCAAACC+TGG - chr8_4:5571547-5571566 None:intergenic 40.0%
TTGTTGGCAGACATGATTAC+TGG + chr8_4:5571593-5571612 Msa1309130:three_prime_UTR 40.0%
!!! TGTGGTTTGTCACTTTTGTC+TGG + chr8_4:5571659-5571678 Msa1309130:three_prime_UTR 40.0%
!! ACTTTTGTCTGGTTTCCTTG+CGG + chr8_4:5571670-5571689 Msa1309130:three_prime_UTR 40.0%
GCGGTTCATGATTCATTAAC+GGG + chr8_4:5571689-5571708 Msa1309130:three_prime_UTR 40.0%
! TGTATTTCAGCGGAGTTTTG+AGG + chr8_4:5571731-5571750 Msa1309130:three_prime_UTR 40.0%
GAGACAACGCTAATTCAGCT+TGG - chr8_4:5563880-5563899 None:intergenic 45.0%
! AGTTGCTTGCTGCTTCACAA+CGG - chr8_4:5563902-5563921 None:intergenic 45.0%
GGGTTTGATTGAGATCTGAG+AGG - chr8_4:5563957-5563976 None:intergenic 45.0%
GAGAGAGAAGGAGAAGAGTT+AGG - chr8_4:5563978-5563997 None:intergenic 45.0%
AATCGGAGAGAAACGGAATC+CGG - chr8_4:5564018-5564037 None:intergenic 45.0%
CTCTCCGATTCATTCATCTC+CGG + chr8_4:5564028-5564047 Msa1309130:five_prime_UTR 45.0%
GGAACCGGAGATGAATGAAT+CGG - chr8_4:5564035-5564054 None:intergenic 45.0%
GATTCATTCATCTCCGGTTC+CGG + chr8_4:5564034-5564053 Msa1309130:five_prime_UTR 45.0%
AATTGAGGTGTAACCGGAAC+CGG - chr8_4:5564050-5564069 None:intergenic 45.0%
CCGGAAAATTGAGGTGTAAC+CGG - chr8_4:5564056-5564075 None:intergenic 45.0%
! CCGGTTACACCTCAATTTTC+CGG + chr8_4:5564053-5564072 Msa1309130:five_prime_UTR 45.0%
!! GCAAGTATCGGTATGAGGAT+TGG - chr8_4:5564212-5564231 None:intergenic 45.0%
GAGAGAAAGAGGTTGCGAAA+AGG - chr8_4:5564331-5564350 None:intergenic 45.0%
! GGCATAATTGGTAACATGGC+GGG + chr8_4:5564755-5564774 Msa1309130:intron 45.0%
ACATAGACCCATCCTGATTC+TGG - chr8_4:5564785-5564804 None:intergenic 45.0%
!! GCTACACTTTTTAGCCTGGT+TGG + chr8_4:5564817-5564836 Msa1309130:intron 45.0%
!!! TTTTAGCCTGGTTGGTTTGG+AGG + chr8_4:5564825-5564844 Msa1309130:intron 45.0%
!! TGGCGGGTTTGTGAAAATCA+TGG - chr8_4:5565020-5565039 None:intergenic 45.0%
AGGCAAATTGGTATCATGGC+GGG - chr8_4:5565036-5565055 None:intergenic 45.0%
GAGGCAAATTGGTATCATGG+CGG - chr8_4:5565037-5565056 None:intergenic 45.0%
CGTATATAGGGGAGGCAAAT+TGG - chr8_4:5565048-5565067 None:intergenic 45.0%
TAGACAACCGTATATAGGGG+AGG - chr8_4:5565056-5565075 None:intergenic 45.0%
GGGGATAGACAACCGTATAT+AGG - chr8_4:5565061-5565080 None:intergenic 45.0%
TCGGCACCTTTATTCAGCTT+AGG + chr8_4:5565121-5565140 Msa1309130:intron 45.0%
CTGGTATCCTAACACATGCT+GGG + chr8_4:5565151-5565170 Msa1309130:intron 45.0%
CTGGTAAAGCTGTCGTGATA+CGG - chr8_4:5565179-5565198 None:intergenic 45.0%
CAGCTTTACCAGAATAAGGG+TGG + chr8_4:5565187-5565206 Msa1309130:intron 45.0%
TGCAGCTTCTGTCAAACATG+TGG + chr8_4:5565300-5565319 Msa1309130:intron 45.0%
AGGGGTAGACGACCATATAT+AGG - chr8_4:5565421-5565440 None:intergenic 45.0%
! GGTGCTGAGTAGCAAAGTTA+AGG - chr8_4:5565469-5565488 None:intergenic 45.0%
TTAGGGGACAATTGCTTGTG+TGG - chr8_4:5565551-5565570 None:intergenic 45.0%
GTGCTGAGTACGGAATTTAG+GGG - chr8_4:5565567-5565586 None:intergenic 45.0%
! GGTGCTGAGTACGGAATTTA+GGG - chr8_4:5565568-5565587 None:intergenic 45.0%
!! AGGTGCTGAGTACGGAATTT+AGG - chr8_4:5565569-5565588 None:intergenic 45.0%
!! ATTAGCCTTAGGCTCGAACT+CGG + chr8_4:5565591-5565610 Msa1309130:intron 45.0%
AAGTGAGACAAGACTGTGTC+AGG - chr8_4:5565619-5565638 None:intergenic 45.0%
!! GAGGAAAAAAAGGCATCGCA+TGG - chr8_4:5565702-5565721 None:intergenic 45.0%
!! CTATGGTAGAGTTGATGTGG+AGG - chr8_4:5565721-5565740 None:intergenic 45.0%
! TGGTTCTATAGTTGAGCACC+AGG + chr8_4:5566799-5566818 Msa1309130:CDS 45.0%
CATATTACAGGAGGCCCTTA+AGG + chr8_4:5566950-5566969 Msa1309130:intron 45.0%
TTTCCCGAAGAAGAACTTCG+TGG + chr8_4:5566990-5567009 Msa1309130:CDS 45.0%
AAGCCACGAAGTTCTTCTTC+GGG - chr8_4:5566996-5567015 None:intergenic 45.0%
CTTAATATCGGAGCAGTGGA+AGG + chr8_4:5567013-5567032 Msa1309130:CDS 45.0%
CTTCCATAACAGATCCTGGA+AGG - chr8_4:5567435-5567454 None:intergenic 45.0%
TCCAGGATCTGTTATGGAAG+CGG + chr8_4:5567435-5567454 Msa1309130:CDS 45.0%
TTAACACCAGCAACGGCAAA+CGG - chr8_4:5567488-5567507 None:intergenic 45.0%
CAGATGCTTGATCTTGAAGC+AGG + chr8_4:5567527-5567546 Msa1309130:CDS 45.0%
GTATCCTAGCAAACCCCTAT+AGG - chr8_4:5567797-5567816 None:intergenic 45.0%
!! TGATCTTGGCGTTGATTCGA+TGG - chr8_4:5568138-5568157 None:intergenic 45.0%
AAAAATCGGGGATGGAGTTC+AGG - chr8_4:5568314-5568333 None:intergenic 45.0%
CTGCATAGCTTTCAAGCTGA+TGG + chr8_4:5568493-5568512 Msa1309130:CDS 45.0%
! TCAAGCTGATGGATCACCAA+TGG + chr8_4:5568504-5568523 Msa1309130:CDS 45.0%
TTCTATGCGTGCCTCATACA+TGG + chr8_4:5568529-5568548 Msa1309130:CDS 45.0%
!! GTTATAAGAGGGTGTTGACG+TGG - chr8_4:5568712-5568731 None:intergenic 45.0%
CGACTGACGTGACAAAATAG+TGG + chr8_4:5568756-5568775 Msa1309130:intron 45.0%
! TGGGAGGATTAGTAAGCTCA+GGG - chr8_4:5569903-5569922 None:intergenic 45.0%
! ATGGGAGGATTAGTAAGCTC+AGG - chr8_4:5569902-5569921 None:intergenic 45.0%
! TTTTACAGGGACGAAATGGG+AGG - chr8_4:5569887-5569906 None:intergenic 45.0%
GACGTGGCAGTGATTAAAAG+GGG - chr8_4:5569837-5569856 None:intergenic 45.0%
CTGACGTGGCAGTGATTAAA+AGG - chr8_4:5569835-5569854 None:intergenic 45.0%
!! CGTCATTTCCCATGCCATTT+TGG - chr8_4:5569805-5569824 None:intergenic 45.0%
GGAAATGACGAAAATACCCC+TGG + chr8_4:5569388-5569407 Msa1309130:intron 45.0%
!! CGTCATTTCCCATGCCATTT+TGG + chr8_4:5569805-5569824 Msa1309130:intron 45.0%
CTGACGTGGCAGTGATTAAA+AGG + chr8_4:5569835-5569854 Msa1309130:intron 45.0%
GACGTGGCAGTGATTAAAAG+GGG + chr8_4:5569837-5569856 Msa1309130:intron 45.0%
! TTTTACAGGGACGAAATGGG+AGG + chr8_4:5569887-5569906 Msa1309130:intron 45.0%
! ATGGGAGGATTAGTAAGCTC+AGG + chr8_4:5569902-5569921 Msa1309130:intron 45.0%
! TGGGAGGATTAGTAAGCTCA+GGG + chr8_4:5569903-5569922 Msa1309130:intron 45.0%
GAGATGAGAGATTGTCTTGG+AGG + chr8_4:5570998-5571017 Msa1309130:intron 45.0%
! CTAAACTCTAGGAGACTGAC+AGG - chr8_4:5571241-5571260 None:intergenic 45.0%
! CTCCTAGAGTTTAGCTTCGA+AGG + chr8_4:5571247-5571266 Msa1309130:three_prime_UTR 45.0%
GTTATTGCATGCTGAATGGC+AGG - chr8_4:5571314-5571333 None:intergenic 45.0%
TCACAGACTTGCAGTGTGTT+TGG + chr8_4:5571387-5571406 Msa1309130:three_prime_UTR 45.0%
TCGGAAGAAATCACCTCCTT+GGG - chr8_4:5571451-5571470 None:intergenic 45.0%
TTCGGAAGAAATCACCTCCT+TGG - chr8_4:5571452-5571471 None:intergenic 45.0%
AAGGAGGTGATTTCTTCCGA+AGG + chr8_4:5571451-5571470 Msa1309130:three_prime_UTR 45.0%
! TCCATTAGAATGGTGTTGGG+AGG + chr8_4:5571494-5571513 Msa1309130:three_prime_UTR 45.0%
TCACATCACCGTTAAGCGTT+CGG - chr8_4:5571523-5571542 None:intergenic 45.0%
!! AAATAATAAATAATATATGA+TGG - chr8_4:5564419-5564438 None:intergenic 5.0%
!! TATATATATATATATATATG+GGG + chr8_4:5567633-5567652 Msa1309130:intron 5.0%
!! TTAAAAAACATAAAAAATTT+CGG - chr8_4:5569536-5569555 None:intergenic 5.0%
!! TTAAAAATCATAAAAAATTT+CGG - chr8_4:5569695-5569714 None:intergenic 5.0%
!!! AAATTTTGAAATTTTTTTTA+AGG + chr8_4:5569756-5569775 Msa1309130:intron 5.0%
!!! TAAGTAAATTTTTTTTTATA+GGG - chr8_4:5570003-5570022 None:intergenic 5.0%
!!! ATAAGTAAATTTTTTTTTAT+AGG - chr8_4:5570004-5570023 None:intergenic 5.0%
GAGAGAGAGAGAGAGAGAGA+AGG - chr8_4:5563990-5564009 None:intergenic 50.0%
TCTCTCTCTCTCTCTCTCAC+CGG + chr8_4:5563996-5564015 Msa1309130:five_prime_UTR 50.0%
GGGTTTGCCAGAATCAGGAT+GGG + chr8_4:5564775-5564794 Msa1309130:intron 50.0%
GGGGAGGCAAATTGGTATCA+TGG - chr8_4:5565040-5565059 None:intergenic 50.0%
!! CTGAATAAAGGTGCCGAGTC+GGG - chr8_4:5565118-5565137 None:intergenic 50.0%
!! GCTGAATAAAGGTGCCGAGT+CGG - chr8_4:5565119-5565138 None:intergenic 50.0%
ATTCAGCTTAGGCTCGAACC+TGG + chr8_4:5565132-5565151 Msa1309130:intron 50.0%
CCAGCATGTGTTAGGATACC+AGG - chr8_4:5565153-5565172 None:intergenic 50.0%
CCTGGTATCCTAACACATGC+TGG + chr8_4:5565150-5565169 Msa1309130:intron 50.0%
TACGGTACCCAGCATGTGTT+AGG - chr8_4:5565161-5565180 None:intergenic 50.0%
ACAGTGACCCACCCTTATTC+TGG - chr8_4:5565198-5565217 None:intergenic 50.0%
!! TAGCCTGTTTGGTTTGGTGG+TGG + chr8_4:5565241-5565260 Msa1309130:intron 50.0%
!! AGCCTGTTTGGTTTGGTGGT+GGG + chr8_4:5565242-5565261 Msa1309130:intron 50.0%
GGAGAGGGAACATGCATGTT+TGG - chr8_4:5565400-5565419 None:intergenic 50.0%
ATTGGGTTTAGGCTCGAACC+CGG + chr8_4:5565492-5565511 Msa1309130:intron 50.0%
ACAGAGAAGAGATAGCGACG+CGG + chr8_4:5566079-5566098 Msa1309130:CDS 50.0%
AGGAGGCCCTTAAGGCTTTA+TGG + chr8_4:5566958-5566977 Msa1309130:intron 50.0%
! GGCCCTTAAGGCTTTATGGA+AGG + chr8_4:5566962-5566981 Msa1309130:CDS 50.0%
GTGGCTTAATATCGGAGCAG+TGG + chr8_4:5567009-5567028 Msa1309130:CDS 50.0%
ATCGGAGCAGTGGAAGGAAA+TGG + chr8_4:5567019-5567038 Msa1309130:CDS 50.0%
TCGGAGCAGTGGAAGGAAAT+GGG + chr8_4:5567020-5567039 Msa1309130:CDS 50.0%
AGCAGTGGAAGGAAATGGGT+TGG + chr8_4:5567024-5567043 Msa1309130:CDS 50.0%
!! TGGAAGGAAATGGGTTGGCA+AGG + chr8_4:5567029-5567048 Msa1309130:CDS 50.0%
!! GGAAGGAAATGGGTTGGCAA+GGG + chr8_4:5567030-5567049 Msa1309130:CDS 50.0%
TGATACGTGTTTGTCAGGGG+TGG + chr8_4:5567149-5567168 Msa1309130:intron 50.0%
CCAGGATCTGTTATGGAAGC+GGG + chr8_4:5567436-5567455 Msa1309130:CDS 50.0%
GATCTGTTATGGAAGCGGGA+AGG + chr8_4:5567440-5567459 Msa1309130:CDS 50.0%
TAACACCAGCAACGGCAAAC+GGG - chr8_4:5567487-5567506 None:intergenic 50.0%
TACAGTCAAGCCACGCACAT+TGG + chr8_4:5568254-5568273 Msa1309130:intron 50.0%
AGGCACGCATAGAAAGCCAT+TGG - chr8_4:5568523-5568542 None:intergenic 50.0%
! TAGTGGGTAACCGACTGTCA+TGG + chr8_4:5568998-5569017 Msa1309130:intron 50.0%
GCAGTGATTAAAAGGGGCGA+GGG - chr8_4:5569843-5569862 None:intergenic 50.0%
GCAGTGATTAAAAGGGGCGA+GGG + chr8_4:5569843-5569862 Msa1309130:intron 50.0%
GGCCTTCGAAGCTAAACTCT+AGG - chr8_4:5571252-5571271 None:intergenic 50.0%
AGCACAGAGTCCATGCACAA+AGG - chr8_4:5571273-5571292 None:intergenic 50.0%
GCCTCCCAACACCATTCTAA+TGG - chr8_4:5571498-5571517 None:intergenic 50.0%
!! ATGGCGGGTTTGCCAGAATC+AGG + chr8_4:5564770-5564789 Msa1309130:intron 55.0%
CGGGTTTGCCAGAATCAGGA+TGG + chr8_4:5564774-5564793 Msa1309130:intron 55.0%
ACGTGACCTCCAAACCAACC+AGG - chr8_4:5564834-5564853 None:intergenic 55.0%
TCTCCCTTAACCTCCCGACT+CGG + chr8_4:5565102-5565121 Msa1309130:intron 55.0%
!! AATAAAGGTGCCGAGTCGGG+AGG - chr8_4:5565115-5565134 None:intergenic 55.0%
CTCCCACCACCAAACCAAAC+AGG - chr8_4:5565247-5565266 None:intergenic 55.0%
!! AGGTACCGAGTTCGAGCCTA+AGG - chr8_4:5565599-5565618 None:intergenic 55.0%
ATTGCAGCTGAGGCTGTTGC+AGG + chr8_4:5566014-5566033 Msa1309130:intron 55.0%
CTGTTGCAGGATCAGCAGCA+TGG + chr8_4:5566027-5566046 Msa1309130:CDS 55.0%
!! TCAGCAGCATGGCTTGGTAG+AGG + chr8_4:5566038-5566057 Msa1309130:CDS 55.0%
CAGAGAAGAGATAGCGACGC+GGG + chr8_4:5566080-5566099 Msa1309130:CDS 55.0%
!! CAATCCTCAGGAGGAGTGCT+TGG + chr8_4:5566742-5566761 Msa1309130:intron 55.0%
!! GGAAATGGGTTGGCAAGGGA+AGG + chr8_4:5567034-5567053 Msa1309130:CDS 55.0%
TACGTGTTTGTCAGGGGTGG+TGG + chr8_4:5567152-5567171 Msa1309130:intron 55.0%
CCCGCTTCCATAACAGATCC+TGG - chr8_4:5567439-5567458 None:intergenic 55.0%
GGAAGGAGATCGTTCCGTGT+GGG + chr8_4:5567457-5567476 Msa1309130:CDS 55.0%
AGTCAAGCCACGCACATTGG+TGG + chr8_4:5568257-5568276 Msa1309130:intron 55.0%
GTCAAGCCACGCACATTGGT+GGG + chr8_4:5568258-5568277 Msa1309130:intron 55.0%
GGCAGTGATTAAAAGGGGCG+AGG - chr8_4:5569842-5569861 None:intergenic 55.0%
GGCAGTGATTAAAAGGGGCG+AGG + chr8_4:5569842-5569861 Msa1309130:intron 55.0%
GCTTCGAAGGCCTTTGTGCA+TGG + chr8_4:5571260-5571279 Msa1309130:three_prime_UTR 55.0%
TGCATGCTGAATGGCAGGCA+TGG - chr8_4:5571309-5571328 None:intergenic 55.0%
GGAGGCTTCCGAACGCTTAA+CGG + chr8_4:5571512-5571531 Msa1309130:three_prime_UTR 55.0%
GCTTAACGGTGATGTGAGCC+AGG + chr8_4:5571526-5571545 Msa1309130:three_prime_UTR 55.0%
GTGCCGAGTCGGGAGGTTAA+GGG - chr8_4:5565108-5565127 None:intergenic 60.0%
GCAGGATCAGCAGCATGGCT+TGG + chr8_4:5566032-5566051 Msa1309130:CDS 60.0%
CTCTCCAAGCACTCCTCCTG+AGG - chr8_4:5566749-5566768 None:intergenic 60.0%
!! CTCAGGAGGAGTGCTTGGAG+AGG + chr8_4:5566747-5566766 Msa1309130:intron 60.0%
GGGAAGGAGATCGTTCCGTG+TGG + chr8_4:5567456-5567475 Msa1309130:CDS 60.0%
GGCAAACGGGTACTCCCACA+CGG - chr8_4:5567474-5567493 None:intergenic 60.0%
GAGTACCCGTTTGCCGTTGC+TGG + chr8_4:5567479-5567498 Msa1309130:CDS 60.0%
GTTGCTCCCACCAATGTGCG+TGG - chr8_4:5568267-5568286 None:intergenic 60.0%
! GGTGCCGAGTCGGGAGGTTA+AGG - chr8_4:5565109-5565128 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 5563859 5571814 5563859 ID=Msa1309130;Name=Msa1309130
chr8_4 mRNA 5563859 5571814 5563859 ID=Msa1309130-mRNA-1;Parent=Msa1309130;Name=Msa1309130-mRNA-1;_AED=0.08;_eAED=0.08;_QI=310|0.85|1|1|1|1|8|594|246
chr8_4 exon 5563859 5564244 5563859 ID=Msa1309130-mRNA-1:exon:1756;Parent=Msa1309130-mRNA-1
chr8_4 exon 5566021 5566130 5566021 ID=Msa1309130-mRNA-1:exon:1757;Parent=Msa1309130-mRNA-1
chr8_4 exon 5566752 5566820 5566752 ID=Msa1309130-mRNA-1:exon:1758;Parent=Msa1309130-mRNA-1
chr8_4 exon 5566960 5567075 5566960 ID=Msa1309130-mRNA-1:exon:1759;Parent=Msa1309130-mRNA-1
chr8_4 exon 5567166 5567220 5567166 ID=Msa1309130-mRNA-1:exon:1760;Parent=Msa1309130-mRNA-1
chr8_4 exon 5567428 5567548 5567428 ID=Msa1309130-mRNA-1:exon:1761;Parent=Msa1309130-mRNA-1
chr8_4 exon 5568465 5568559 5568465 ID=Msa1309130-mRNA-1:exon:1762;Parent=Msa1309130-mRNA-1
chr8_4 exon 5571122 5571814 5571122 ID=Msa1309130-mRNA-1:exon:1763;Parent=Msa1309130-mRNA-1
chr8_4 five_prime_UTR 5563859 5564168 5563859 ID=Msa1309130-mRNA-1:five_prime_utr;Parent=Msa1309130-mRNA-1
chr8_4 CDS 5564169 5564244 5564169 ID=Msa1309130-mRNA-1:cds;Parent=Msa1309130-mRNA-1
chr8_4 CDS 5566021 5566130 5566021 ID=Msa1309130-mRNA-1:cds;Parent=Msa1309130-mRNA-1
chr8_4 CDS 5566752 5566820 5566752 ID=Msa1309130-mRNA-1:cds;Parent=Msa1309130-mRNA-1
chr8_4 CDS 5566960 5567075 5566960 ID=Msa1309130-mRNA-1:cds;Parent=Msa1309130-mRNA-1
chr8_4 CDS 5567166 5567220 5567166 ID=Msa1309130-mRNA-1:cds;Parent=Msa1309130-mRNA-1
chr8_4 CDS 5567428 5567548 5567428 ID=Msa1309130-mRNA-1:cds;Parent=Msa1309130-mRNA-1
chr8_4 CDS 5568465 5568559 5568465 ID=Msa1309130-mRNA-1:cds;Parent=Msa1309130-mRNA-1
chr8_4 CDS 5571122 5571220 5571122 ID=Msa1309130-mRNA-1:cds;Parent=Msa1309130-mRNA-1
chr8_4 three_prime_UTR 5571221 5571814 5571221 ID=Msa1309130-mRNA-1:three_prime_utr;Parent=Msa1309130-mRNA-1
Gene Sequence

>Msa1309130

ATGGATGATAGAGGTGCTTCATTCGTTGCTGTTCGAAGACCCAATCCTCATACCGATACTTGCAATTCTAATTCTGCTGAGGCTGTTGCAGGATCAGCAGCATGGCTTGGTAGAGGTCTGTCTTGTGTCTGTGCACAGAGAAGAGATAGCGACGCGGGTAGCTTTTTTGATTTAACTCTAGCCCAGGAGGAGTGCTTGGAGAGGCTACAGAGACGAATAGAAGTTCCATATGATGGTTCTATAGTTGAGCACCAGGAGGCCCTTAAGGCTTTATGGAAGGTTGCATTTCCCGAAGAAGAACTTCGTGGCTTAATATCGGAGCAGTGGAAGGAAATGGGTTGGCAAGGGAAGGATCCATCAACAGATTTTAGGGGTGGTGGTTTTATTTCTTTGGAGAATTTTCTGTTCTTTGCTAGGAATTTCCCGAAATCCTTCCAGGATCTGTTATGGAAGCGGGAAGGAGATCGTTCCGTGTGGGAGTACCCGTTTGCCGTTGCTGGTGTTAACATCACATTCATGCTGGTGCAGATGCTTGATCTTGAAGCAGAAAATGAATCAGCTTTTGATCTTCTCTACTGCATAGCTTTCAAGCTGATGGATCACCAATGGCTTTCTATGCGTGCCTCATACATGGATTTCAATACAGTGATGAAATCTACACGTCAAGAGCTAGAAAAAGAGCTTCTTCAAGAAGTTTCGCATCTTGAAGATTTACCCTCATACAAACTACTTTCACGATAG
Protein sequence

>Msa1309130

MDDRGASFVAVRRPNPHTDTCNSNSAEAVAGSAAWLGRGLSCVCAQRRDSDAGSFFDLTLAQEECLERLQRRIEVPYDGSIVEHQEALKALWKVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENFLFFARNFPKSFQDLLWKREGDRSVWEYPFAVAGVNITFMLVQMLDLEAENESAFDLLYCIAFKLMDHQWLSMRASYMDFNTVMKSTRQELEKELLQEVSHLEDLPSYKLLSR*