Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415810 | XP_003600707.2 | 93.333 | 195 | 2 | 1 | 1 | 184 | 23 | 217 | 6.34e-126 | 363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415810 | sp|Q9LQU5|NUD18_ARATH | 62.658 | 158 | 46 | 2 | 10 | 156 | 1 | 156 | 1.99e-63 | 196 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415810 | A0A396IVT9 | 93.333 | 195 | 2 | 1 | 1 | 184 | 23 | 217 | 3.03e-126 | 363 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0415810 | -0.819210 | 1.309242e-52 | -8.615850e-47 |
| Msa0008340 | Msa0415810 | 0.807449 | 5.026991e-50 | -8.615850e-47 |
| Msa0008410 | Msa0415810 | 0.829023 | 6.489081e-55 | -8.615850e-47 |
| Msa0010020 | Msa0415810 | 0.815640 | 8.337234e-52 | -8.615850e-47 |
| Msa0011720 | Msa0415810 | 0.826311 | 2.909069e-54 | -8.615850e-47 |
| Msa0012440 | Msa0415810 | 0.801823 | 7.508230e-49 | -8.615850e-47 |
| Msa0018620 | Msa0415810 | 0.807027 | 6.175901e-50 | -8.615850e-47 |
| Msa0032370 | Msa0415810 | 0.851700 | 7.479654e-61 | -8.615850e-47 |
| Msa0044020 | Msa0415810 | 0.822358 | 2.472541e-53 | -8.615850e-47 |
| Msa0048000 | Msa0415810 | 0.837552 | 4.858372e-57 | -8.615850e-47 |
| Msa0050730 | Msa0415810 | 0.825030 | 5.852965e-54 | -8.615850e-47 |
| Msa0050760 | Msa0415810 | 0.831723 | 1.420022e-55 | -8.615850e-47 |
| Msa0053900 | Msa0415810 | 0.803876 | 2.827704e-49 | -8.615850e-47 |
| Msa0057140 | Msa0415810 | 0.800597 | 1.337853e-48 | -8.615850e-47 |
| Msa0057240 | Msa0415810 | 0.808503 | 2.999849e-50 | -8.615850e-47 |
| Msa0060600 | Msa0415810 | 0.800650 | 1.304776e-48 | -8.615850e-47 |
| Msa0076000 | Msa0415810 | 0.817986 | 2.480513e-52 | -8.615850e-47 |
| Msa0078650 | Msa0415810 | 0.807413 | 5.116443e-50 | -8.615850e-47 |
| Msa0081230 | Msa0415810 | 0.801737 | 7.820170e-49 | -8.615850e-47 |
| Msa0090030 | Msa0415810 | 0.815977 | 7.009495e-52 | -8.615850e-47 |
| Msa0090590 | Msa0415810 | 0.801885 | 7.288651e-49 | -8.615850e-47 |
| Msa0094010 | Msa0415810 | 0.807031 | 6.165326e-50 | -8.615850e-47 |
| Msa0094920 | Msa0415810 | 0.810565 | 1.081918e-50 | -8.615850e-47 |
| Msa0095010 | Msa0415810 | 0.803260 | 3.795741e-49 | -8.615850e-47 |
| Msa0095380 | Msa0415810 | 0.827942 | 1.184049e-54 | -8.615850e-47 |
| Msa0097990 | Msa0415810 | 0.810182 | 1.308692e-50 | -8.615850e-47 |
| Msa0104610 | Msa0415810 | 0.803532 | 3.333781e-49 | -8.615850e-47 |
| Msa0105340 | Msa0415810 | 0.805385 | 1.369551e-49 | -8.615850e-47 |
| Msa0105420 | Msa0415810 | 0.827234 | 1.750576e-54 | -8.615850e-47 |
| Msa0113970 | Msa0415810 | 0.805624 | 1.220210e-49 | -8.615850e-47 |
| Msa0115810 | Msa0415810 | 0.810517 | 1.108099e-50 | -8.615850e-47 |
| Msa0120330 | Msa0415810 | 0.809124 | 2.209389e-50 | -8.615850e-47 |
| Msa0120340 | Msa0415810 | 0.801979 | 6.971726e-49 | -8.615850e-47 |
| Msa0124340 | Msa0415810 | 0.813727 | 2.211148e-51 | -8.615850e-47 |
| Msa0126370 | Msa0415810 | 0.805207 | 1.491899e-49 | -8.615850e-47 |
| Msa0143240 | Msa0415810 | -0.800988 | 1.113198e-48 | -8.615850e-47 |
| Msa0143380 | Msa0415810 | 0.821566 | 3.772455e-53 | -8.615850e-47 |
| Msa0145950 | Msa0415810 | 0.819587 | 1.074044e-52 | -8.615850e-47 |
| Msa0148340 | Msa0415810 | 0.818767 | 1.650523e-52 | -8.615850e-47 |
| Msa0149000 | Msa0415810 | 0.815225 | 1.031101e-51 | -8.615850e-47 |
| Msa0149560 | Msa0415810 | 0.806744 | 7.089349e-50 | -8.615850e-47 |
| Msa0151690 | Msa0415810 | 0.803942 | 2.740369e-49 | -8.615850e-47 |
| Msa0165300 | Msa0415810 | 0.804674 | 1.928666e-49 | -8.615850e-47 |
| Msa0168100 | Msa0415810 | 0.804403 | 2.197208e-49 | -8.615850e-47 |
| Msa0172350 | Msa0415810 | 0.851025 | 1.160967e-60 | -8.615850e-47 |
| Msa0181360 | Msa0415810 | 0.801776 | 7.676418e-49 | -8.615850e-47 |
| Msa0183830 | Msa0415810 | 0.801970 | 7.003385e-49 | -8.615850e-47 |
| Msa0184020 | Msa0415810 | 0.807926 | 3.981771e-50 | -8.615850e-47 |
| Msa0185590 | Msa0415810 | 0.996902 | 6.935409e-234 | -8.615850e-47 |
| Msa0186890 | Msa0415810 | 0.828531 | 8.537491e-55 | -8.615850e-47 |
| Msa0188630 | Msa0415810 | 0.817967 | 2.505355e-52 | -8.615850e-47 |
| Msa0188680 | Msa0415810 | -0.809819 | 1.567088e-50 | -8.615850e-47 |
| Msa0193920 | Msa0415810 | 0.815048 | 1.128437e-51 | -8.615850e-47 |
| Msa0198520 | Msa0415810 | 0.802407 | 5.692918e-49 | -8.615850e-47 |
| Msa0198530 | Msa0415810 | 0.806798 | 6.905266e-50 | -8.615850e-47 |
| Msa0205850 | Msa0415810 | 0.851636 | 7.802966e-61 | -8.615850e-47 |
| Msa0208810 | Msa0415810 | 0.811299 | 7.504365e-51 | -8.615850e-47 |
| Msa0219070 | Msa0415810 | 0.830876 | 2.294103e-55 | -8.615850e-47 |
| Msa0219190 | Msa0415810 | 0.803705 | 3.068664e-49 | -8.615850e-47 |
| Msa0222920 | Msa0415810 | 0.812253 | 4.653672e-51 | -8.615850e-47 |
| Msa0223290 | Msa0415810 | 0.812221 | 4.727896e-51 | -8.615850e-47 |
| Msa0223380 | Msa0415810 | 0.803862 | 2.847349e-49 | -8.615850e-47 |
| Msa0226290 | Msa0415810 | 0.804434 | 2.164293e-49 | -8.615850e-47 |
| Msa0227400 | Msa0415810 | 0.830348 | 3.088573e-55 | -8.615850e-47 |
| Msa0227510 | Msa0415810 | 0.820729 | 5.881270e-53 | -8.615850e-47 |
| Msa0235890 | Msa0415810 | 0.830910 | 2.251002e-55 | -8.615850e-47 |
| Msa0236440 | Msa0415810 | 0.811614 | 6.409779e-51 | -8.615850e-47 |
| Msa0236980 | Msa0415810 | 0.808685 | 2.742546e-50 | -8.615850e-47 |
| Msa0369570 | Msa0415810 | 0.821769 | 3.386291e-53 | -8.615850e-47 |
| Msa0372660 | Msa0415810 | 0.818129 | 2.302854e-52 | -8.615850e-47 |
| Msa0377530 | Msa0415810 | 0.849231 | 3.692232e-60 | -8.615850e-47 |
| Msa0393950 | Msa0415810 | 0.839733 | 1.328378e-57 | -8.615850e-47 |
| Msa0398640 | Msa0415810 | 0.800016 | 1.756332e-48 | -8.615850e-47 |
| Msa0402330 | Msa0415810 | 0.809937 | 1.478257e-50 | -8.615850e-47 |
| Msa0410300 | Msa0415810 | 0.807113 | 5.923397e-50 | -8.615850e-47 |
| Msa0412440 | Msa0415810 | 0.804060 | 2.588981e-49 | -8.615850e-47 |
| Msa0413450 | Msa0415810 | 0.828184 | 1.035370e-54 | -8.615850e-47 |
| Msa0414950 | Msa0415810 | -0.806240 | 9.053769e-50 | -8.615850e-47 |
| Msa0415810 | Msa0419820 | 0.808128 | 3.606717e-50 | -8.615850e-47 |
| Msa0415810 | Msa0423360 | -0.817303 | 3.537505e-52 | -8.615850e-47 |
| Msa0415810 | Msa0424920 | 0.806728 | 7.145032e-50 | -8.615850e-47 |
| Msa0415810 | Msa0426330 | 0.847195 | 1.348373e-59 | -8.615850e-47 |
| Msa0415810 | Msa0426810 | 0.824880 | 6.349007e-54 | -8.615850e-47 |
| Msa0415810 | Msa0427200 | 0.811760 | 5.959510e-51 | -8.615850e-47 |
| Msa0415810 | Msa0449820 | 0.805529 | 1.277689e-49 | -8.615850e-47 |
| Msa0415810 | Msa0449830 | 0.804920 | 1.713818e-49 | -8.615850e-47 |
| Msa0415810 | Msa0460930 | 0.912046 | 3.048845e-83 | -8.615850e-47 |
| Msa0415810 | Msa0461590 | 0.818721 | 1.691181e-52 | -8.615850e-47 |
| Msa0415810 | Msa0464900 | 0.834435 | 3.002699e-56 | -8.615850e-47 |
| Msa0415810 | Msa0469910 | -0.815001 | 1.156344e-51 | -8.615850e-47 |
| Msa0415810 | Msa0473240 | 0.837364 | 5.428415e-57 | -8.615850e-47 |
| Msa0415810 | Msa0480320 | 0.819254 | 1.278821e-52 | -8.615850e-47 |
| Msa0415810 | Msa0484780 | 0.831990 | 1.220028e-55 | -8.615850e-47 |
| Msa0415810 | Msa0489030 | 0.801029 | 1.091828e-48 | -8.615850e-47 |
| Msa0415810 | Msa0490350 | 0.806266 | 8.940910e-50 | -8.615850e-47 |
| Msa0415810 | Msa0497420 | 0.804258 | 2.355385e-49 | -8.615850e-47 |
| Msa0415810 | Msa0505770 | 0.815742 | 7.911876e-52 | -8.615850e-47 |
| Msa0415810 | Msa0506890 | 0.943007 | 2.607527e-102 | -8.615850e-47 |
| Msa0415810 | Msa0506940 | 0.945935 | 1.199284e-104 | -8.615850e-47 |
| Msa0415810 | Msa0508200 | 0.810271 | 1.252595e-50 | -8.615850e-47 |
| Msa0415810 | Msa0513440 | 0.819452 | 1.152840e-52 | -8.615850e-47 |
| Msa0415810 | Msa0517490 | 0.847060 | 1.468757e-59 | -8.615850e-47 |
| Msa0415810 | Msa0521880 | 0.831316 | 1.789187e-55 | -8.615850e-47 |
| Msa0415810 | Msa0526710 | 0.839212 | 1.813639e-57 | -8.615850e-47 |
| Msa0415810 | Msa0526890 | 0.847490 | 1.118730e-59 | -8.615850e-47 |
| Msa0415810 | Msa0534590 | 0.804842 | 1.778853e-49 | -8.615850e-47 |
| Msa0415810 | Msa0535030 | 0.848017 | 8.012158e-60 | -8.615850e-47 |
| Msa0415810 | Msa0535060 | 0.847039 | 1.487748e-59 | -8.615850e-47 |
| Msa0415810 | Msa0541860 | 0.826617 | 2.458627e-54 | -8.615850e-47 |
| Msa0415810 | Msa0542160 | 0.853378 | 2.486876e-61 | -8.615850e-47 |
| Msa0415810 | Msa0545060 | 0.830483 | 2.863831e-55 | -8.615850e-47 |
| Msa0415810 | Msa0547400 | 0.830659 | 2.593102e-55 | -8.615850e-47 |
| Msa0415810 | Msa0552810 | 0.800689 | 1.281160e-48 | -8.615850e-47 |
| Msa0415810 | Msa0556860 | 0.814691 | 1.354070e-51 | -8.615850e-47 |
| Msa0415810 | Msa0560470 | 0.801280 | 9.700723e-49 | -8.615850e-47 |
| Msa0415810 | Msa0568820 | 0.824631 | 7.271726e-54 | -8.615850e-47 |
| Msa0415810 | Msa0577220 | 0.843281 | 1.543115e-58 | -8.615850e-47 |
| Msa0415810 | Msa0578090 | 0.810814 | 9.557197e-51 | -8.615850e-47 |
| Msa0415810 | Msa0590680 | 0.805061 | 1.600910e-49 | -8.615850e-47 |
| Msa0415810 | Msa0591060 | 0.815939 | 7.149881e-52 | -8.615850e-47 |
| Msa0415810 | Msa0591770 | 0.832923 | 7.164720e-56 | -8.615850e-47 |
| Msa0415810 | Msa0600600 | 0.801057 | 1.077588e-48 | -8.615850e-47 |
| Msa0415810 | Msa0602120 | 0.806704 | 7.227497e-50 | -8.615850e-47 |
| Msa0415810 | Msa0619070 | 0.828328 | 9.555351e-55 | -8.615850e-47 |
| Msa0415810 | Msa0619980 | 0.805699 | 1.176684e-49 | -8.615850e-47 |
| Msa0415810 | Msa0623700 | 0.809847 | 1.545724e-50 | -8.615850e-47 |
| Msa0415810 | Msa0638070 | 0.800971 | 1.121978e-48 | -8.615850e-47 |
| Msa0415810 | Msa0638280 | 0.812984 | 3.219880e-51 | -8.615850e-47 |
| Msa0415810 | Msa0638320 | 0.817131 | 3.866573e-52 | -8.615850e-47 |
| Msa0415810 | Msa0639120 | 0.801254 | 9.819500e-49 | -8.615850e-47 |
| Msa0415810 | Msa0641140 | 0.814564 | 1.445115e-51 | -8.615850e-47 |
| Msa0415810 | Msa0643250 | 0.817642 | 2.966749e-52 | -8.615850e-47 |
| Msa0415810 | Msa0652300 | 0.810347 | 1.206101e-50 | -8.615850e-47 |
| Msa0415810 | Msa0663900 | 0.821385 | 4.152847e-53 | -8.615850e-47 |
| Msa0415810 | Msa0664760 | 0.816544 | 5.236434e-52 | -8.615850e-47 |
| Msa0415810 | Msa0669850 | 0.843421 | 1.415958e-58 | -8.615850e-47 |
| Msa0415810 | Msa0677270 | 0.817936 | 2.546587e-52 | -8.615850e-47 |
| Msa0415810 | Msa0679680 | 0.803846 | 2.868627e-49 | -8.615850e-47 |
| Msa0415810 | Msa0682950 | 0.812767 | 3.591353e-51 | -8.615850e-47 |
| Msa0415810 | Msa0684500 | 0.804983 | 1.662260e-49 | -8.615850e-47 |
| Msa0415810 | Msa0693380 | 0.823129 | 1.635553e-53 | -8.615850e-47 |
| Msa0415810 | Msa0703230 | 0.829980 | 3.799748e-55 | -8.615850e-47 |
| Msa0415810 | Msa0706370 | 0.834797 | 2.435009e-56 | -8.615850e-47 |
| Msa0415810 | Msa0708520 | 0.804518 | 2.078553e-49 | -8.615850e-47 |
| Msa0415810 | Msa0711490 | 0.806363 | 8.530046e-50 | -8.615850e-47 |
| Msa0415810 | Msa0713460 | 0.806072 | 9.825731e-50 | -8.615850e-47 |
| Msa0415810 | Msa0715110 | 0.832651 | 8.368538e-56 | -8.615850e-47 |
| Msa0415810 | Msa0715140 | 0.811740 | 6.019837e-51 | -8.615850e-47 |
| Msa0415810 | Msa0715150 | 0.810117 | 1.351968e-50 | -8.615850e-47 |
| Msa0415810 | Msa0724830 | 0.803472 | 3.430601e-49 | -8.615850e-47 |
| Msa0415810 | Msa0741900 | 0.828350 | 9.438871e-55 | -8.615850e-47 |
| Msa0415810 | Msa0743200 | 0.808169 | 3.535126e-50 | -8.615850e-47 |
| Msa0415810 | Msa0743260 | 0.801000 | 1.106816e-48 | -8.615850e-47 |
| Msa0415810 | Msa0743680 | 0.835117 | 2.021872e-56 | -8.615850e-47 |
| Msa0415810 | Msa0750350 | 0.816901 | 4.354800e-52 | -8.615850e-47 |
| Msa0415810 | Msa0750880 | 0.808505 | 2.997392e-50 | -8.615850e-47 |
| Msa0415810 | Msa0754720 | -0.833949 | 3.974084e-56 | -8.615850e-47 |
| Msa0415810 | Msa0756630 | -0.808957 | 2.398600e-50 | -8.615850e-47 |
| Msa0415810 | Msa0757050 | 0.824358 | 8.430841e-54 | -8.615850e-47 |
| Msa0415810 | Msa0784620 | 0.820231 | 7.650640e-53 | -8.615850e-47 |
| Msa0415810 | Msa0787260 | 0.811781 | 5.896660e-51 | -8.615850e-47 |
| Msa0415810 | Msa0790390 | -0.811430 | 7.028686e-51 | -8.615850e-47 |
| Msa0415810 | Msa0798030 | 0.812075 | 5.089147e-51 | -8.615850e-47 |
| Msa0415810 | Msa0798070 | 0.824810 | 6.597338e-54 | -8.615850e-47 |
| Msa0415810 | Msa0810020 | 0.806947 | 6.422929e-50 | -8.615850e-47 |
| Msa0415810 | Msa0813100 | 0.803351 | 3.633790e-49 | -8.615850e-47 |
| Msa0415810 | Msa0814320 | 0.802867 | 4.574908e-49 | -8.615850e-47 |
| Msa0415810 | Msa0819560 | 0.803587 | 3.247090e-49 | -8.615850e-47 |
| Msa0415810 | Msa0822990 | 0.822293 | 2.559945e-53 | -8.615850e-47 |
| Msa0415810 | Msa0824660 | 0.800485 | 1.409637e-48 | -8.615850e-47 |
| Msa0415810 | Msa0829620 | 0.806245 | 9.034697e-50 | -8.615850e-47 |
| Msa0415810 | Msa0844230 | 0.800623 | 1.321097e-48 | -8.615850e-47 |
| Msa0415810 | Msa0850960 | 0.808667 | 2.767964e-50 | -8.615850e-47 |
| Msa0415810 | Msa0862100 | 0.813975 | 1.949218e-51 | -8.615850e-47 |
| Msa0415810 | Msa0863370 | 0.837552 | 4.860179e-57 | -8.615850e-47 |
| Msa0415810 | Msa0863800 | 0.840615 | 7.816171e-58 | -8.615850e-47 |
| Msa0415810 | Msa0866120 | 0.800825 | 1.201821e-48 | -8.615850e-47 |
| Msa0415810 | Msa0867890 | 0.802729 | 4.885880e-49 | -8.615850e-47 |
| Msa0415810 | Msa0869100 | 0.812645 | 3.819962e-51 | -8.615850e-47 |
| Msa0415810 | Msa0870620 | 0.807698 | 4.451933e-50 | -8.615850e-47 |
| Msa0415810 | Msa0872310 | 0.803139 | 4.020789e-49 | -8.615850e-47 |
| Msa0415810 | Msa0874500 | 0.815564 | 8.666927e-52 | -8.615850e-47 |
| Msa0415810 | Msa0875620 | 0.807589 | 4.696172e-50 | -8.615850e-47 |
| Msa0415810 | Msa0882510 | 0.813934 | 1.990470e-51 | -8.615850e-47 |
| Msa0415810 | Msa0893810 | 0.828645 | 8.010225e-55 | -8.615850e-47 |
| Msa0415810 | Msa0899230 | 0.806250 | 9.013716e-50 | -8.615850e-47 |
| Msa0415810 | Msa0908170 | 0.856934 | 2.298480e-62 | -8.615850e-47 |
| Msa0415810 | Msa0910980 | -0.807261 | 5.511608e-50 | -8.615850e-47 |
| Msa0415810 | Msa0931950 | 0.803011 | 4.273166e-49 | -8.615850e-47 |
| Msa0415810 | Msa0933310 | 0.814424 | 1.551449e-51 | -8.615850e-47 |
| Msa0415810 | Msa0933440 | 0.829858 | 4.068380e-55 | -8.615850e-47 |
| Msa0415810 | Msa0939790 | 0.812931 | 3.307080e-51 | -8.615850e-47 |
| Msa0415810 | Msa0946080 | 0.827760 | 1.309483e-54 | -8.615850e-47 |
| Msa0415810 | Msa0954550 | 0.806751 | 7.065917e-50 | -8.615850e-47 |
| Msa0415810 | Msa0959010 | 0.811423 | 7.053079e-51 | -8.615850e-47 |
| Msa0415810 | Msa0960160 | 0.805978 | 1.028028e-49 | -8.615850e-47 |
| Msa0415810 | Msa0967370 | 0.829677 | 4.502424e-55 | -8.615850e-47 |
| Msa0415810 | Msa0971090 | 0.807557 | 4.769806e-50 | -8.615850e-47 |
| Msa0415810 | Msa0986920 | 0.812741 | 3.638774e-51 | -8.615850e-47 |
| Msa0415810 | Msa0993530 | 0.841099 | 5.834872e-58 | -8.615850e-47 |
| Msa0415810 | Msa1000940 | 0.809397 | 1.930487e-50 | -8.615850e-47 |
| Msa0415810 | Msa1004420 | 0.808577 | 2.892881e-50 | -8.615850e-47 |
| Msa0415810 | Msa1015060 | 0.814977 | 1.170570e-51 | -8.615850e-47 |
| Msa0415810 | Msa1026760 | 0.806810 | 6.863916e-50 | -8.615850e-47 |
| Msa0415810 | Msa1026790 | 0.806778 | 6.972035e-50 | -8.615850e-47 |
| Msa0415810 | Msa1033560 | 0.834085 | 3.675726e-56 | -8.615850e-47 |
| Msa0415810 | Msa1037700 | -0.813730 | 2.207429e-51 | -8.615850e-47 |
| Msa0415810 | Msa1037920 | 0.800004 | 1.766034e-48 | -8.615850e-47 |
| Msa0415810 | Msa1040890 | 0.821927 | 3.111635e-53 | -8.615850e-47 |
| Msa0415810 | Msa1041520 | 0.817168 | 3.792188e-52 | -8.615850e-47 |
| Msa0415810 | Msa1046300 | 0.823738 | 1.178597e-53 | -8.615850e-47 |
| Msa0415810 | Msa1081560 | 0.809397 | 1.930807e-50 | -8.615850e-47 |
| Msa0415810 | Msa1082500 | 0.824705 | 6.982746e-54 | -8.615850e-47 |
| Msa0415810 | Msa1082700 | 0.824616 | 7.329299e-54 | -8.615850e-47 |
| Msa0415810 | Msa1083210 | 0.859788 | 3.246677e-63 | -8.615850e-47 |
| Msa0415810 | Msa1087470 | 0.819864 | 9.283748e-53 | -8.615850e-47 |
| Msa0415810 | Msa1089840 | 0.807702 | 4.443652e-50 | -8.615850e-47 |
| Msa0415810 | Msa1092820 | 0.802128 | 6.497246e-49 | -8.615850e-47 |
| Msa0415810 | Msa1100720 | 0.820673 | 6.057458e-53 | -8.615850e-47 |
| Msa0415810 | Msa1112390 | 0.802164 | 6.387699e-49 | -8.615850e-47 |
| Msa0415810 | Msa1124310 | 0.820444 | 6.838914e-53 | -8.615850e-47 |
| Msa0415810 | Msa1125470 | 0.827435 | 1.566649e-54 | -8.615850e-47 |
| Msa0415810 | Msa1125550 | 0.828366 | 9.358312e-55 | -8.615850e-47 |
| Msa0415810 | Msa1127130 | 0.804366 | 2.236124e-49 | -8.615850e-47 |
| Msa0415810 | Msa1127830 | 0.843884 | 1.064656e-58 | -8.615850e-47 |
| Msa0415810 | Msa1127890 | 0.822574 | 2.202922e-53 | -8.615850e-47 |
| Msa0415810 | Msa1130210 | -0.825483 | 4.573296e-54 | -8.615850e-47 |
| Msa0415810 | Msa1140690 | 0.800182 | 1.624675e-48 | -8.615850e-47 |
| Msa0415810 | Msa1160400 | 0.823064 | 1.693177e-53 | -8.615850e-47 |
| Msa0415810 | Msa1166410 | 0.822365 | 2.462580e-53 | -8.615850e-47 |
| Msa0415810 | Msa1172670 | 0.820333 | 7.249498e-53 | -8.615850e-47 |
| Msa0415810 | Msa1174100 | 0.820537 | 6.509115e-53 | -8.615850e-47 |
| Msa0415810 | Msa1174850 | 0.804134 | 2.498857e-49 | -8.615850e-47 |
| Msa0415810 | Msa1181170 | -0.804335 | 2.269408e-49 | -8.615850e-47 |
| Msa0415810 | Msa1183660 | 0.804115 | 2.521579e-49 | -8.615850e-47 |
| Msa0415810 | Msa1185540 | 0.811518 | 6.725421e-51 | -8.615850e-47 |
| Msa0415810 | Msa1187840 | 0.822597 | 2.176106e-53 | -8.615850e-47 |
| Msa0415810 | Msa1210400 | 0.819324 | 1.233163e-52 | -8.615850e-47 |
| Msa0415810 | Msa1214880 | 0.807590 | 4.692612e-50 | -8.615850e-47 |
| Msa0415810 | Msa1217860 | 0.806543 | 7.818011e-50 | -8.615850e-47 |
| Msa0415810 | Msa1218480 | 0.805405 | 1.356536e-49 | -8.615850e-47 |
| Msa0415810 | Msa1218590 | 0.801362 | 9.333510e-49 | -8.615850e-47 |
| Msa0415810 | Msa1218650 | 0.801861 | 7.374692e-49 | -8.615850e-47 |
| Msa0415810 | Msa1228290 | 0.814656 | 1.378588e-51 | -8.615850e-47 |
| Msa0415810 | Msa1228890 | 0.833737 | 4.490750e-56 | -8.615850e-47 |
| Msa0415810 | Msa1231240 | 0.826830 | 2.187453e-54 | -8.615850e-47 |
| Msa0415810 | Msa1236070 | -0.806288 | 8.848680e-50 | -8.615850e-47 |
| Msa0415810 | Msa1237030 | 0.826408 | 2.758171e-54 | -8.615850e-47 |
| Msa0415810 | Msa1246530 | -0.803286 | 3.748285e-49 | -8.615850e-47 |
| Msa0415810 | Msa1254710 | 0.824808 | 6.603385e-54 | -8.615850e-47 |
| Msa0415810 | Msa1265070 | 0.802349 | 5.851000e-49 | -8.615850e-47 |
| Msa0415810 | Msa1267840 | 0.833638 | 4.753603e-56 | -8.615850e-47 |
| Msa0415810 | Msa1269300 | 0.800765 | 1.235879e-48 | -8.615850e-47 |
| Msa0415810 | Msa1280560 | 0.819601 | 1.066258e-52 | -8.615850e-47 |
| Msa0415810 | Msa1283170 | 0.812613 | 3.882112e-51 | -8.615850e-47 |
| Msa0415810 | Msa1294840 | 0.806274 | 8.905470e-50 | -8.615850e-47 |
| Msa0415810 | Msa1300860 | 0.827047 | 1.940870e-54 | -8.615850e-47 |
| Msa0415810 | Msa1303160 | 0.801359 | 9.346645e-49 | -8.615850e-47 |
| Msa0415810 | Msa1307950 | 0.805777 | 1.133276e-49 | -8.615850e-47 |
| Msa0415810 | Msa1309130 | 0.820317 | 7.312283e-53 | -8.615850e-47 |
| Msa0415810 | Msa1311960 | 0.824603 | 7.382171e-54 | -8.615850e-47 |
| Msa0415810 | Msa1314340 | 0.807252 | 5.536284e-50 | -8.615850e-47 |
| Msa0415810 | Msa1316780 | 0.811441 | 6.990259e-51 | -8.615850e-47 |
| Msa0415810 | Msa1316830 | 0.815565 | 8.663750e-52 | -8.615850e-47 |
| Msa0415810 | Msa1318120 | 0.800617 | 1.325253e-48 | -8.615850e-47 |
| Msa0415810 | Msa1331910 | 0.817394 | 3.373967e-52 | -8.615850e-47 |
| Msa0415810 | Msa1331920 | 0.819104 | 1.383440e-52 | -8.615850e-47 |
| Msa0415810 | Msa1337730 | 0.834298 | 3.250645e-56 | -8.615850e-47 |
| Msa0415810 | Msa1340020 | 0.819704 | 1.009897e-52 | -8.615850e-47 |
| Msa0415810 | Msa1340650 | 0.808530 | 2.959589e-50 | -8.615850e-47 |
| Msa0415810 | Msa1341070 | 0.811040 | 8.542423e-51 | -8.615850e-47 |
| Msa0415810 | Msa1344850 | 0.818003 | 2.458660e-52 | -8.615850e-47 |
| Msa0415810 | Msa1348360 | 0.800513 | 1.391090e-48 | -8.615850e-47 |
| Msa0415810 | Msa1353060 | 0.809192 | 2.136220e-50 | -8.615850e-47 |
| Msa0415810 | Msa1360890 | -0.821470 | 3.969386e-53 | -8.615850e-47 |
| Msa0415810 | Msa1362510 | 0.843580 | 1.283674e-58 | -8.615850e-47 |
| Msa0415810 | Msa1363890 | 0.801327 | 9.488272e-49 | -8.615850e-47 |
| Msa0415810 | Msa1365150 | 0.809605 | 1.742008e-50 | -8.615850e-47 |
| Msa0415810 | Msa1365200 | 0.800115 | 1.676489e-48 | -8.615850e-47 |
| Msa0415810 | Msa1367880 | 0.811692 | 6.165010e-51 | -8.615850e-47 |
| Msa0415810 | Msa1386230 | 0.828199 | 1.026872e-54 | -8.615850e-47 |
| Msa0415810 | Msa1390230 | 0.893228 | 7.639978e-75 | -8.615850e-47 |
| Msa0415810 | Msa1390310 | 0.844959 | 5.471731e-59 | -8.615850e-47 |
| Msa0415810 | Msa1397810 | 0.811358 | 7.287873e-51 | -8.615850e-47 |
| Msa0415810 | Msa1398860 | 0.836378 | 9.693361e-57 | -8.615850e-47 |
| Msa0415810 | Msa1403580 | -0.815460 | 9.142510e-52 | -8.615850e-47 |
| Msa0415810 | Msa1403930 | -0.807154 | 5.805303e-50 | -8.615850e-47 |
| Msa0415810 | Msa1404540 | 0.847657 | 1.006534e-59 | -8.615850e-47 |
| Msa0415810 | Msa1408790 | 0.819108 | 1.380703e-52 | -8.615850e-47 |
| Msa0415810 | Msa1415940 | 0.811431 | 7.026473e-51 | -8.615850e-47 |
| Msa0415810 | Msa1416390 | 0.809323 | 2.002440e-50 | -8.615850e-47 |
| Msa0415810 | Msa1429420 | 0.808891 | 2.478716e-50 | -8.615850e-47 |
| Msa0415810 | Msa1431060 | 0.840026 | 1.113720e-57 | -8.615850e-47 |
| Msa0415810 | Msa1436040 | 0.808625 | 2.825256e-50 | -8.615850e-47 |
| Msa0415810 | Msa1438640 | 0.801037 | 1.087556e-48 | -8.615850e-47 |
| Msa0415810 | Msa1439230 | 0.800384 | 1.478384e-48 | -8.615850e-47 |
| Msa0415810 | Msa1439960 | 0.815089 | 1.105036e-51 | -8.615850e-47 |
| Msa0415810 | Msa1440600 | 0.831818 | 1.345665e-55 | -8.615850e-47 |
| Msa0415810 | Msa1442220 | -0.814147 | 1.786335e-51 | -8.615850e-47 |
| Msa0415810 | Msa1443290 | -0.811574 | 6.539391e-51 | -8.615850e-47 |
| Msa0415810 | Msa1452480 | 0.803509 | 3.370064e-49 | -8.615850e-47 |
| Msa0415810 | Msa1466090 | 0.808477 | 3.038270e-50 | -8.615850e-47 |
| Msa0415810 | Msa1466460 | 0.817383 | 3.393732e-52 | -8.615850e-47 |
| Msa0239450 | Msa0415810 | 0.814341 | 1.618541e-51 | -8.615850e-47 |
| Msa0242680 | Msa0415810 | 0.806157 | 9.426193e-50 | -8.615850e-47 |
| Msa0243690 | Msa0415810 | 0.801743 | 7.796738e-49 | -8.615850e-47 |
| Msa0245850 | Msa0415810 | 0.806485 | 8.039462e-50 | -8.615850e-47 |
| Msa0246430 | Msa0415810 | 0.801775 | 7.679747e-49 | -8.615850e-47 |
| Msa0248980 | Msa0415810 | 0.806734 | 7.125360e-50 | -8.615850e-47 |
| Msa0251250 | Msa0415810 | 0.837412 | 5.277216e-57 | -8.615850e-47 |
| Msa0259560 | Msa0415810 | 0.832492 | 9.163546e-56 | -8.615850e-47 |
| Msa0260210 | Msa0415810 | 0.804877 | 1.748924e-49 | -8.615850e-47 |
| Msa0260810 | Msa0415810 | 0.844496 | 7.295197e-59 | -8.615850e-47 |
| Msa0264350 | Msa0415810 | 0.810803 | 9.612931e-51 | -8.615850e-47 |
| Msa0267760 | Msa0415810 | 0.840810 | 6.946061e-58 | -8.615850e-47 |
| Msa0270220 | Msa0415810 | -0.812037 | 5.186963e-51 | -8.615850e-47 |
| Msa0274360 | Msa0415810 | 0.839559 | 1.473838e-57 | -8.615850e-47 |
| Msa0275400 | Msa0415810 | -0.815765 | 7.816875e-52 | -8.615850e-47 |
| Msa0276920 | Msa0415810 | 0.838405 | 2.933351e-57 | -8.615850e-47 |
| Msa0282250 | Msa0415810 | 0.815423 | 9.318219e-52 | -8.615850e-47 |
| Msa0287310 | Msa0415810 | 0.818218 | 2.198808e-52 | -8.615850e-47 |
| Msa0288730 | Msa0415810 | 0.802060 | 6.709922e-49 | -8.615850e-47 |
| Msa0296760 | Msa0415810 | 0.817276 | 3.586972e-52 | -8.615850e-47 |
| Msa0298120 | Msa0415810 | 0.807506 | 4.888528e-50 | -8.615850e-47 |
| Msa0302650 | Msa0415810 | 0.802355 | 5.835983e-49 | -8.615850e-47 |
| Msa0304290 | Msa0415810 | 0.822337 | 2.499879e-53 | -8.615850e-47 |
| Msa0304330 | Msa0415810 | 0.823509 | 1.332876e-53 | -8.615850e-47 |
| Msa0304700 | Msa0415810 | 0.823603 | 1.267488e-53 | -8.615850e-47 |
| Msa0305890 | Msa0415810 | 0.804634 | 1.966389e-49 | -8.615850e-47 |
| Msa0307830 | Msa0415810 | -0.819322 | 1.234484e-52 | -8.615850e-47 |
| Msa0311700 | Msa0415810 | 0.816619 | 5.038386e-52 | -8.615850e-47 |
| Msa0314210 | Msa0415810 | 0.830979 | 2.164345e-55 | -8.615850e-47 |
| Msa0315240 | Msa0415810 | 0.846358 | 2.283957e-59 | -8.615850e-47 |
| Msa0316850 | Msa0415810 | 0.810800 | 9.624978e-51 | -8.615850e-47 |
| Msa0320100 | Msa0415810 | 0.815560 | 8.682320e-52 | -8.615850e-47 |
| Msa0321190 | Msa0415810 | 0.805149 | 1.534433e-49 | -8.615850e-47 |
| Msa0323180 | Msa0415810 | 0.819480 | 1.136185e-52 | -8.615850e-47 |
| Msa0325850 | Msa0415810 | 0.819613 | 1.059216e-52 | -8.615850e-47 |
| Msa0327410 | Msa0415810 | 0.808001 | 3.838219e-50 | -8.615850e-47 |
| Msa0328210 | Msa0415810 | 0.800975 | 1.119848e-48 | -8.615850e-47 |
| Msa0333920 | Msa0415810 | 0.801827 | 7.491278e-49 | -8.615850e-47 |
| Msa0334040 | Msa0415810 | 0.821505 | 3.895393e-53 | -8.615850e-47 |
| Msa0335040 | Msa0415810 | 0.830197 | 3.362713e-55 | -8.615850e-47 |
| Msa0340810 | Msa0415810 | 0.801126 | 1.042909e-48 | -8.615850e-47 |
| Msa0342910 | Msa0415810 | 0.804779 | 1.833527e-49 | -8.615850e-47 |
| Msa0347360 | Msa0415810 | 0.804782 | 1.830728e-49 | -8.615850e-47 |
| Msa0355270 | Msa0415810 | 0.817973 | 2.497158e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415810 | MtrunA17_Chr3g0110281 | 93.333 | 195 | 2 | 1 | 1 | 184 | 23 | 217 | 5.83e-130 | 363 |
| Msa0415810 | MtrunA17_Chr5g0434521 | 66.321 | 193 | 50 | 3 | 1 | 180 | 1 | 191 | 8.10e-85 | 248 |
| Msa0415810 | MtrunA17_Chr1g0161131 | 61.350 | 163 | 49 | 3 | 10 | 160 | 1 | 161 | 1.15e-63 | 193 |
| Msa0415810 | MtrunA17_Chr8g0391621 | 57.669 | 163 | 55 | 3 | 10 | 160 | 1 | 161 | 3.62e-60 | 184 |
| Msa0415810 | MtrunA17_Chr6g0479111 | 58.750 | 160 | 50 | 4 | 8 | 155 | 70 | 225 | 4.58e-58 | 181 |
| Msa0415810 | MtrunA17_Chr8g0353331 | 45.912 | 159 | 66 | 4 | 13 | 153 | 4 | 160 | 2.58e-39 | 132 |
| Msa0415810 | MtrunA17_Chr7g0252391 | 41.520 | 171 | 80 | 5 | 15 | 166 | 6 | 175 | 2.47e-30 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415810 | AT1G14860.1 | 62.658 | 158 | 46 | 2 | 10 | 156 | 1 | 156 | 2.02e-64 | 196 |
| Msa0415810 | AT2G01670.1 | 59.375 | 160 | 52 | 2 | 8 | 156 | 4 | 161 | 1.09e-62 | 192 |
| Msa0415810 | AT1G18300.1 | 59.119 | 159 | 52 | 3 | 8 | 154 | 38 | 195 | 2.24e-61 | 189 |
| Msa0415810 | AT1G73540.1 | 55.901 | 161 | 52 | 4 | 8 | 155 | 39 | 193 | 7.22e-55 | 172 |
| Msa0415810 | AT3G26690.1 | 42.697 | 178 | 77 | 6 | 12 | 166 | 3 | 178 | 1.82e-36 | 126 |
| Msa0415810 | AT3G26690.2 | 42.697 | 178 | 77 | 6 | 12 | 166 | 3 | 178 | 1.82e-36 | 126 |
| Msa0415810 | AT1G12880.1 | 43.902 | 164 | 68 | 5 | 13 | 153 | 4 | 166 | 1.20e-34 | 121 |
| Msa0415810 | AT3G12600.1 | 43.478 | 161 | 67 | 4 | 10 | 149 | 1 | 158 | 2.63e-31 | 112 |
| Msa0415810 | AT3G12600.2 | 42.953 | 149 | 61 | 4 | 22 | 149 | 4 | 149 | 1.42e-27 | 102 |
Find 61 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATGAAACAGAGAGTTTA+AGG | 0.153308 | 3_2:+62266449 | None:intergenic |
| TTGCTTGGTGCAGGGTAAAT+TGG | 0.178727 | 3_2:-62265336 | Msa0415810:intron |
| ATAAGTTCTGTTCCCTTTAC+TGG | 0.208033 | 3_2:-62264233 | Msa0415810:three_prime_UTR |
| AAAACTTCTTGAAGTCAATT+AGG | 0.266342 | 3_2:-62264420 | Msa0415810:three_prime_UTR |
| TATATACTATCATAATAATT+TGG | 0.282242 | 3_2:+62264633 | None:intergenic |
| TCTACTTGTTCAAGAGGAAT+TGG | 0.306076 | 3_2:-62265255 | Msa0415810:CDS |
| CTTTACAAAACACACAATAA+TGG | 0.312157 | 3_2:-62266425 | Msa0415810:exon |
| TGCAGGGTAAATTGGGTAAA+TGG | 0.319017 | 3_2:-62265328 | Msa0415810:intron |
| TTCAAGAGGAATTGGAGTTC+TGG | 0.326630 | 3_2:-62265247 | Msa0415810:CDS |
| AATAATTTGGCTCAATTCAA+TGG | 0.336424 | 3_2:+62264646 | None:intergenic |
| GCATCTCCAATGCAATTTAG+AGG | 0.344908 | 3_2:+62264759 | None:intergenic |
| ACACACAATAATGGTTGCTT+TGG | 0.348822 | 3_2:-62266416 | Msa0415810:exon |
| AGACTAGTAAACCGTCTCTT+AGG | 0.352300 | 3_2:-62264816 | Msa0415810:CDS |
| TACCATACAGATATAAGATT+GGG | 0.391619 | 3_2:-62265875 | Msa0415810:CDS |
| TGTGATGTGATTATCATTTG+TGG | 0.395872 | 3_2:-62264259 | Msa0415810:three_prime_UTR |
| ATATATATTAAATGTATTCA+TGG | 0.401816 | 3_2:-62264465 | Msa0415810:three_prime_UTR |
| TGCTTGGTGCAGGGTAAATT+GGG | 0.401857 | 3_2:-62265335 | Msa0415810:intron |
| GTCACATTGGTTTCTCGTAC+TGG | 0.402078 | 3_2:-62266376 | Msa0415810:CDS |
| TCCCCAATCTTATATCTGTA+TGG | 0.410177 | 3_2:+62265873 | None:intergenic |
| ATTATGTTCTTAAAACTACT+TGG | 0.415061 | 3_2:+62264157 | None:intergenic |
| CTGGTGGATGAAAGAGGCTT+TGG | 0.431939 | 3_2:-62264841 | Msa0415810:CDS |
| AAAGGTCGTCGTCAAGTTGT+TGG | 0.437350 | 3_2:-62266331 | Msa0415810:CDS |
| TCTAATATGAAGAAGGGATA+AGG | 0.443747 | 3_2:-62264308 | Msa0415810:three_prime_UTR |
| AAAACCTTCGTCAAAGAAGA+TGG | 0.452927 | 3_2:-62265217 | Msa0415810:CDS |
| CAAAACTTCATCTCCAGTAA+AGG | 0.455325 | 3_2:+62264220 | None:intergenic |
| AAAACTTCATCTCCAGTAAA+GGG | 0.456071 | 3_2:+62264221 | None:intergenic |
| ACATATGATACTTTATATGA+TGG | 0.457732 | 3_2:-62265290 | Msa0415810:CDS |
| AGGTTGAGGAGAAGAATAGT+AGG | 0.461776 | 3_2:-62264671 | Msa0415810:three_prime_UTR |
| ACATCACACAATACAATAAG+TGG | 0.462429 | 3_2:+62264274 | None:intergenic |
| TAACCTCTCTAATATGAAGA+AGG | 0.464022 | 3_2:-62264315 | Msa0415810:three_prime_UTR |
| AAGGTCGTCGTCAAGTTGTT+GGG | 0.471306 | 3_2:-62266330 | Msa0415810:intron |
| ATACCATACAGATATAAGAT+TGG | 0.489360 | 3_2:-62265876 | Msa0415810:CDS |
| TTGTTATAAGTTCTCAGAAA+GGG | 0.490101 | 3_2:-62265812 | Msa0415810:CDS |
| CTACGTCCTCTAAATTGCAT+TGG | 0.502705 | 3_2:-62264765 | Msa0415810:CDS |
| TTGTTAAAAGTGTAATTTCG+TGG | 0.512493 | 3_2:-62264726 | Msa0415810:exon |
| TCAAGAAAATGTTGTCACAT+TGG | 0.512517 | 3_2:-62266389 | Msa0415810:CDS |
| CTTGTTATAAGTTCTCAGAA+AGG | 0.514027 | 3_2:-62265813 | Msa0415810:CDS |
| TCAACACTGGTGGATGAAAG+AGG | 0.518367 | 3_2:-62264847 | Msa0415810:CDS |
| TATATATTAAATGTATTCAT+GGG | 0.519572 | 3_2:-62264464 | Msa0415810:three_prime_UTR |
| GAGTTACAACGTTATAGAAA+AGG | 0.522985 | 3_2:-62266349 | Msa0415810:CDS |
| TTACCCATCTTCTTTGACGA+AGG | 0.524824 | 3_2:+62265213 | None:intergenic |
| ATAAGTTCTCAGAAAGGGAA+AGG | 0.542940 | 3_2:-62265807 | Msa0415810:CDS |
| GTTTCCTCTACTTGTTCAAG+AGG | 0.548107 | 3_2:-62265261 | Msa0415810:CDS |
| AGAGAAACCATGGAGGAAGC+TGG | 0.548494 | 3_2:-62265633 | Msa0415810:CDS |
| TCGTACACCAGCTTCCTCCA+TGG | 0.562948 | 3_2:+62265626 | None:intergenic |
| GGCAGCTTTGAGAGAAACCA+TGG | 0.565133 | 3_2:-62265643 | Msa0415810:CDS |
| TAAAAGTGTAATTTCGTGGA+GGG | 0.569228 | 3_2:-62264722 | Msa0415810:exon |
| TAAGTTCTCAGAAAGGGAAA+GGG | 0.569652 | 3_2:-62265806 | Msa0415810:CDS |
| ATCCCTTCTTCATATTAGAG+AGG | 0.571358 | 3_2:+62264312 | None:intergenic |
| AATTCCTCTTGAACAAGTAG+AGG | 0.573287 | 3_2:+62265257 | None:intergenic |
| AAACCTTCGTCAAAGAAGAT+GGG | 0.587211 | 3_2:-62265216 | Msa0415810:intron |
| CAAGAGATGTTTGTCAACAC+TGG | 0.594375 | 3_2:-62264860 | Msa0415810:CDS |
| GAAAGGGATGCTATTTCCAA+AGG | 0.599650 | 3_2:-62265790 | Msa0415810:intron |
| AACCTCTCTAATATGAAGAA+GGG | 0.605647 | 3_2:-62264314 | Msa0415810:three_prime_UTR |
| TTAAAAGTGTAATTTCGTGG+AGG | 0.620018 | 3_2:-62264723 | Msa0415810:exon |
| ATGGAGGAAGCTGGTGTACG+AGG | 0.648306 | 3_2:-62265624 | Msa0415810:CDS |
| GATTTGTGCTAATGTAAGAG+AGG | 0.649109 | 3_2:-62264363 | Msa0415810:three_prime_UTR |
| ACCATACAGATATAAGATTG+GGG | 0.668226 | 3_2:-62265874 | Msa0415810:CDS |
| GAGATGTTTGTCAACACTGG+TGG | 0.687529 | 3_2:-62264857 | Msa0415810:CDS |
| TGGTGTACGAGGCATTGTTG+AGG | 0.717499 | 3_2:-62265613 | Msa0415810:intron |
| AGCTTTGAGAGAAACCATGG+AGG | 0.776762 | 3_2:-62265640 | Msa0415810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATTATAAATAACATAA+TGG | + | chr3_2:62264938-62264957 | None:intergenic | 10.0% |
| !! | TATATATATATATTAAAGTC+TGG | + | chr3_2:62265526-62265545 | None:intergenic | 10.0% |
| !! | TATATACTATCATAATAATT+TGG | + | chr3_2:62266022-62266041 | None:intergenic | 10.0% |
| !!! | CAAAAATAAGTATTTTTTTA+GGG | + | chr3_2:62266098-62266117 | None:intergenic | 10.0% |
| !! | ATATATATTAAATGTATTCA+TGG | - | chr3_2:62266187-62266206 | Msa0415810:intron | 10.0% |
| !! | TATATATTAAATGTATTCAT+GGG | - | chr3_2:62266188-62266207 | Msa0415810:intron | 10.0% |
| !! | CAAAATTATAAATAACATAA+TGG | + | chr3_2:62264938-62264957 | None:intergenic | 10.0% |
| !! | TATATATATATATTAAAGTC+TGG | + | chr3_2:62265526-62265545 | None:intergenic | 10.0% |
| !! | TATATACTATCATAATAATT+TGG | + | chr3_2:62266022-62266041 | None:intergenic | 10.0% |
| !!! | CAAAAATAAGTATTTTTTTA+GGG | + | chr3_2:62266098-62266117 | None:intergenic | 10.0% |
| !! | ATATATATTAAATGTATTCA+TGG | - | chr3_2:62266187-62266206 | Msa0415810:intron | 10.0% |
| !! | TATATATTAAATGTATTCAT+GGG | - | chr3_2:62266188-62266207 | Msa0415810:intron | 10.0% |
| !!! | AAAAAAATACTATTGGTTAA+TGG | - | chr3_2:62264538-62264557 | Msa0415810:three_prime_UTR | 15.0% |
| !!! | AAAAAATACTATTGGTTAAT+GGG | - | chr3_2:62264539-62264558 | Msa0415810:three_prime_UTR | 15.0% |
| !!! | GATAATTCTCTAAAAATAAT+TGG | - | chr3_2:62265272-62265291 | Msa0415810:CDS | 15.0% |
| !! | TAAAAATATTACAGACTAAA+TGG | - | chr3_2:62265576-62265595 | Msa0415810:intron | 15.0% |
| !! | CTAAAAGAATATATTATACT+AGG | + | chr3_2:62265632-62265651 | None:intergenic | 15.0% |
| !!! | CTAGTATAATATATTCTTTT+AGG | - | chr3_2:62265630-62265649 | Msa0415810:CDS | 15.0% |
| !!! | TATTCTTTTAGGAATTAAAT+TGG | - | chr3_2:62265641-62265660 | Msa0415810:CDS | 15.0% |
| !!! | TTGTTATTAATTTTCTGAAA+GGG | - | chr3_2:62265710-62265729 | Msa0415810:intron | 15.0% |
| !!! | GCAAAAATAAGTATTTTTTT+AGG | + | chr3_2:62266099-62266118 | None:intergenic | 15.0% |
| !!! | AAAAAAATACTATTGGTTAA+TGG | - | chr3_2:62264538-62264557 | Msa0415810:three_prime_UTR | 15.0% |
| !!! | AAAAAATACTATTGGTTAAT+GGG | - | chr3_2:62264539-62264558 | Msa0415810:three_prime_UTR | 15.0% |
| !!! | GATAATTCTCTAAAAATAAT+TGG | - | chr3_2:62265272-62265291 | Msa0415810:CDS | 15.0% |
| !! | TAAAAATATTACAGACTAAA+TGG | - | chr3_2:62265576-62265595 | Msa0415810:intron | 15.0% |
| !! | CTAAAAGAATATATTATACT+AGG | + | chr3_2:62265632-62265651 | None:intergenic | 15.0% |
| !!! | CTAGTATAATATATTCTTTT+AGG | - | chr3_2:62265630-62265649 | Msa0415810:CDS | 15.0% |
| !!! | TATTCTTTTAGGAATTAAAT+TGG | - | chr3_2:62265641-62265660 | Msa0415810:CDS | 15.0% |
| !!! | TTGTTATTAATTTTCTGAAA+GGG | - | chr3_2:62265710-62265729 | Msa0415810:intron | 15.0% |
| !!! | GCAAAAATAAGTATTTTTTT+AGG | + | chr3_2:62266099-62266118 | None:intergenic | 15.0% |
| !! | ATAATACTGCTAAATTATCA+CGG | - | chr3_2:62264503-62264522 | Msa0415810:three_prime_UTR | 20.0% |
| !! | CACTGATAAAAAAATACTAT+TGG | - | chr3_2:62264531-62264550 | Msa0415810:three_prime_UTR | 20.0% |
| !!! | TATTTTAAAGATGCACTAAT+TGG | - | chr3_2:62264668-62264687 | Msa0415810:three_prime_UTR | 20.0% |
| !!! | TAATTTTGTGTTTACAATCA+TGG | - | chr3_2:62264741-62264760 | Msa0415810:CDS | 20.0% |
| !! | ACATATGATACTTTATATGA+TGG | - | chr3_2:62265362-62265381 | Msa0415810:intron | 20.0% |
| !!! | TTTTATAGTTACAACTTACA+CGG | + | chr3_2:62265561-62265580 | None:intergenic | 20.0% |
| !! | TAATTTAGTGACTAAATTGA+CGG | - | chr3_2:62265678-62265697 | Msa0415810:intron | 20.0% |
| !!! | GTTGTTATTAATTTTCTGAA+AGG | - | chr3_2:62265709-62265728 | Msa0415810:intron | 20.0% |
| !!! | TTGTTTGAAACTTTCTATTT+TGG | - | chr3_2:62265744-62265763 | Msa0415810:intron | 20.0% |
| !!! | TGTTTGAAACTTTCTATTTT+GGG | - | chr3_2:62265745-62265764 | Msa0415810:intron | 20.0% |
| !! | ATAATACTGCTAAATTATCA+CGG | - | chr3_2:62264503-62264522 | Msa0415810:three_prime_UTR | 20.0% |
| !! | CACTGATAAAAAAATACTAT+TGG | - | chr3_2:62264531-62264550 | Msa0415810:three_prime_UTR | 20.0% |
| !!! | TATTTTAAAGATGCACTAAT+TGG | - | chr3_2:62264668-62264687 | Msa0415810:three_prime_UTR | 20.0% |
| !!! | TAATTTTGTGTTTACAATCA+TGG | - | chr3_2:62264741-62264760 | Msa0415810:CDS | 20.0% |
| !! | ACATATGATACTTTATATGA+TGG | - | chr3_2:62265362-62265381 | Msa0415810:intron | 20.0% |
| !!! | TTTTATAGTTACAACTTACA+CGG | + | chr3_2:62265561-62265580 | None:intergenic | 20.0% |
| !! | TAATTTAGTGACTAAATTGA+CGG | - | chr3_2:62265678-62265697 | Msa0415810:intron | 20.0% |
| !!! | GTTGTTATTAATTTTCTGAA+AGG | - | chr3_2:62265709-62265728 | Msa0415810:intron | 20.0% |
| !!! | TTGTTTGAAACTTTCTATTT+TGG | - | chr3_2:62265744-62265763 | Msa0415810:intron | 20.0% |
| !!! | TGTTTGAAACTTTCTATTTT+GGG | - | chr3_2:62265745-62265764 | Msa0415810:intron | 20.0% |
| ! | ATAATGAAACAGAGAGTTTA+AGG | + | chr3_2:62264206-62264225 | None:intergenic | 25.0% |
| ! | CTTTACAAAACACACAATAA+TGG | - | chr3_2:62264227-62264246 | Msa0415810:three_prime_UTR | 25.0% |
| ! | AAAAATTGTGACTTTCATTG+TGG | - | chr3_2:62264423-62264442 | Msa0415810:three_prime_UTR | 25.0% |
| ! | AAAATTGTGACTTTCATTGT+GGG | - | chr3_2:62264424-62264443 | Msa0415810:three_prime_UTR | 25.0% |
| ! | TCTATTGAATTTGACATCAA+TGG | - | chr3_2:62264712-62264731 | Msa0415810:three_prime_UTR | 25.0% |
| ! | ATACCATACAGATATAAGAT+TGG | - | chr3_2:62264776-62264795 | Msa0415810:CDS | 25.0% |
| ! | TACCATACAGATATAAGATT+GGG | - | chr3_2:62264777-62264796 | Msa0415810:CDS | 25.0% |
| !!! | ATTGGATGTTTTAGATGAAT+TGG | - | chr3_2:62264811-62264830 | Msa0415810:CDS | 25.0% |
| ! | TTGTTATAAGTTCTCAGAAA+GGG | - | chr3_2:62264840-62264859 | Msa0415810:CDS | 25.0% |
| ! | GACTAATATCTATATACCTT+TGG | + | chr3_2:62264881-62264900 | None:intergenic | 25.0% |
| ! | TGTATTGCTTACTAAATAAC+AGG | - | chr3_2:62264956-62264975 | Msa0415810:intron | 25.0% |
| ! | GTATTGCTTACTAAATAACA+GGG | - | chr3_2:62264957-62264976 | Msa0415810:intron | 25.0% |
| ! | AATTAGATGAATCTCAAAAG+AGG | - | chr3_2:62264988-62265007 | Msa0415810:intron | 25.0% |
| !! | CTTACGTATCTAGAATAAAT+TGG | + | chr3_2:62265124-62265143 | None:intergenic | 25.0% |
| ! | TATTCTAGATACGTAAGTAT+CGG | - | chr3_2:62265127-62265146 | Msa0415810:intron | 25.0% |
| !!! | ATGAATTGTTTTGAAGAACT+CGG | - | chr3_2:62265208-62265227 | Msa0415810:intron | 25.0% |
| !! | GAAGAATCCTACAATTTTAA+AGG | - | chr3_2:62265242-62265261 | Msa0415810:CDS | 25.0% |
| !!! | CATTTAGCCTTTAAAATTGT+AGG | + | chr3_2:62265252-62265271 | None:intergenic | 25.0% |
| !!! | CTACAATTTTAAAGGCTAAA+TGG | - | chr3_2:62265250-62265269 | Msa0415810:CDS | 25.0% |
| !! | TCTCTAAAAATAATTGGCTT+TGG | - | chr3_2:62265278-62265297 | Msa0415810:CDS | 25.0% |
| ! | ATACTAATGTTACTATTGCT+TGG | - | chr3_2:62265301-62265320 | Msa0415810:CDS | 25.0% |
| ! | AATATTACAGACTAAATGGA+TGG | - | chr3_2:62265580-62265599 | Msa0415810:intron | 25.0% |
| !!! | GGATGGATTTTATATACTTA+AGG | - | chr3_2:62265597-62265616 | Msa0415810:intron | 25.0% |
| ! | ATATATTATACTAGGACACA+TGG | + | chr3_2:62265624-62265643 | None:intergenic | 25.0% |
| !!! | GTTTGAAACTTTCTATTTTG+GGG | - | chr3_2:62265746-62265765 | Msa0415810:intron | 25.0% |
| !! | TTGTTAAAAGTGTAATTTCG+TGG | - | chr3_2:62265926-62265945 | Msa0415810:intron | 25.0% |
| !!! | AATTTTTTTTGTGTTGCTTG+AGG | - | chr3_2:62265961-62265980 | Msa0415810:intron | 25.0% |
| !! | AATAATTTGGCTCAATTCAA+TGG | + | chr3_2:62266009-62266028 | None:intergenic | 25.0% |
| !!! | TTTTTTCTCATCTTATGATG+AGG | - | chr3_2:62266144-62266163 | Msa0415810:intron | 25.0% |
| !! | TGAGGATTAATTTTCAATTG+TGG | - | chr3_2:62266162-62266181 | Msa0415810:intron | 25.0% |
| ! | AAAACTTCTTGAAGTCAATT+AGG | - | chr3_2:62266232-62266251 | Msa0415810:intron | 25.0% |
| ! | ATAATGAAACAGAGAGTTTA+AGG | + | chr3_2:62264206-62264225 | None:intergenic | 25.0% |
| ! | CTTTACAAAACACACAATAA+TGG | - | chr3_2:62264227-62264246 | Msa0415810:three_prime_UTR | 25.0% |
| ! | AAAAATTGTGACTTTCATTG+TGG | - | chr3_2:62264423-62264442 | Msa0415810:three_prime_UTR | 25.0% |
| ! | AAAATTGTGACTTTCATTGT+GGG | - | chr3_2:62264424-62264443 | Msa0415810:three_prime_UTR | 25.0% |
| ! | TCTATTGAATTTGACATCAA+TGG | - | chr3_2:62264712-62264731 | Msa0415810:three_prime_UTR | 25.0% |
| ! | ATACCATACAGATATAAGAT+TGG | - | chr3_2:62264776-62264795 | Msa0415810:CDS | 25.0% |
| ! | TACCATACAGATATAAGATT+GGG | - | chr3_2:62264777-62264796 | Msa0415810:CDS | 25.0% |
| !!! | ATTGGATGTTTTAGATGAAT+TGG | - | chr3_2:62264811-62264830 | Msa0415810:CDS | 25.0% |
| ! | TTGTTATAAGTTCTCAGAAA+GGG | - | chr3_2:62264840-62264859 | Msa0415810:CDS | 25.0% |
| ! | GACTAATATCTATATACCTT+TGG | + | chr3_2:62264881-62264900 | None:intergenic | 25.0% |
| ! | TGTATTGCTTACTAAATAAC+AGG | - | chr3_2:62264956-62264975 | Msa0415810:intron | 25.0% |
| ! | GTATTGCTTACTAAATAACA+GGG | - | chr3_2:62264957-62264976 | Msa0415810:intron | 25.0% |
| ! | AATTAGATGAATCTCAAAAG+AGG | - | chr3_2:62264988-62265007 | Msa0415810:intron | 25.0% |
| !! | CTTACGTATCTAGAATAAAT+TGG | + | chr3_2:62265124-62265143 | None:intergenic | 25.0% |
| ! | TATTCTAGATACGTAAGTAT+CGG | - | chr3_2:62265127-62265146 | Msa0415810:intron | 25.0% |
| !!! | ATGAATTGTTTTGAAGAACT+CGG | - | chr3_2:62265208-62265227 | Msa0415810:intron | 25.0% |
| !! | GAAGAATCCTACAATTTTAA+AGG | - | chr3_2:62265242-62265261 | Msa0415810:CDS | 25.0% |
| !!! | CATTTAGCCTTTAAAATTGT+AGG | + | chr3_2:62265252-62265271 | None:intergenic | 25.0% |
| !!! | CTACAATTTTAAAGGCTAAA+TGG | - | chr3_2:62265250-62265269 | Msa0415810:CDS | 25.0% |
| !! | TCTCTAAAAATAATTGGCTT+TGG | - | chr3_2:62265278-62265297 | Msa0415810:CDS | 25.0% |
| ! | ATACTAATGTTACTATTGCT+TGG | - | chr3_2:62265301-62265320 | Msa0415810:CDS | 25.0% |
| ! | AATATTACAGACTAAATGGA+TGG | - | chr3_2:62265580-62265599 | Msa0415810:intron | 25.0% |
| !!! | GGATGGATTTTATATACTTA+AGG | - | chr3_2:62265597-62265616 | Msa0415810:intron | 25.0% |
| ! | ATATATTATACTAGGACACA+TGG | + | chr3_2:62265624-62265643 | None:intergenic | 25.0% |
| !!! | GTTTGAAACTTTCTATTTTG+GGG | - | chr3_2:62265746-62265765 | Msa0415810:intron | 25.0% |
| !! | TTGTTAAAAGTGTAATTTCG+TGG | - | chr3_2:62265926-62265945 | Msa0415810:intron | 25.0% |
| !!! | AATTTTTTTTGTGTTGCTTG+AGG | - | chr3_2:62265961-62265980 | Msa0415810:intron | 25.0% |
| !! | AATAATTTGGCTCAATTCAA+TGG | + | chr3_2:62266009-62266028 | None:intergenic | 25.0% |
| !!! | TTTTTTCTCATCTTATGATG+AGG | - | chr3_2:62266144-62266163 | Msa0415810:intron | 25.0% |
| !! | TGAGGATTAATTTTCAATTG+TGG | - | chr3_2:62266162-62266181 | Msa0415810:intron | 25.0% |
| ! | AAAACTTCTTGAAGTCAATT+AGG | - | chr3_2:62266232-62266251 | Msa0415810:intron | 25.0% |
| TCAAGAAAATGTTGTCACAT+TGG | - | chr3_2:62264263-62264282 | Msa0415810:three_prime_UTR | 30.0% | |
| GAGTTACAACGTTATAGAAA+AGG | - | chr3_2:62264303-62264322 | Msa0415810:three_prime_UTR | 30.0% | |
| AAATTGTGACTTTCATTGTG+GGG | - | chr3_2:62264425-62264444 | Msa0415810:three_prime_UTR | 30.0% | |
| !! | GACCACTTTTGATAATTTTG+AGG | - | chr3_2:62264472-62264491 | Msa0415810:three_prime_UTR | 30.0% |
| CACCTCAAAATTATCAAAAG+TGG | + | chr3_2:62264477-62264496 | None:intergenic | 30.0% | |
| ACCATACAGATATAAGATTG+GGG | - | chr3_2:62264778-62264797 | Msa0415810:CDS | 30.0% | |
| ! | CTTGTTATAAGTTCTCAGAA+AGG | - | chr3_2:62264839-62264858 | Msa0415810:CDS | 30.0% |
| !!! | TGAATTGTTTTGAAGAACTC+GGG | - | chr3_2:62265209-62265228 | Msa0415810:intron | 30.0% |
| ! | CACTTTTAACAAGTCAGATT+TGG | + | chr3_2:62265918-62265937 | None:intergenic | 30.0% |
| ! | TTAAAAGTGTAATTTCGTGG+AGG | - | chr3_2:62265929-62265948 | Msa0415810:intron | 30.0% |
| ! | TAAAAGTGTAATTTCGTGGA+GGG | - | chr3_2:62265930-62265949 | Msa0415810:intron | 30.0% |
| TAACCTCTCTAATATGAAGA+AGG | - | chr3_2:62266337-62266356 | Msa0415810:CDS | 30.0% | |
| AACCTCTCTAATATGAAGAA+GGG | - | chr3_2:62266338-62266357 | Msa0415810:CDS | 30.0% | |
| TCTAATATGAAGAAGGGATA+AGG | - | chr3_2:62266344-62266363 | Msa0415810:CDS | 30.0% | |
| ACATCACACAATACAATAAG+TGG | + | chr3_2:62266381-62266400 | None:intergenic | 30.0% | |
| TGTGATGTGATTATCATTTG+TGG | - | chr3_2:62266393-62266412 | Msa0415810:CDS | 30.0% | |
| AAAACTTCATCTCCAGTAAA+GGG | + | chr3_2:62266434-62266453 | None:intergenic | 30.0% | |
| TCAAGAAAATGTTGTCACAT+TGG | - | chr3_2:62264263-62264282 | Msa0415810:three_prime_UTR | 30.0% | |
| GAGTTACAACGTTATAGAAA+AGG | - | chr3_2:62264303-62264322 | Msa0415810:three_prime_UTR | 30.0% | |
| AAATTGTGACTTTCATTGTG+GGG | - | chr3_2:62264425-62264444 | Msa0415810:three_prime_UTR | 30.0% | |
| !! | GACCACTTTTGATAATTTTG+AGG | - | chr3_2:62264472-62264491 | Msa0415810:three_prime_UTR | 30.0% |
| CACCTCAAAATTATCAAAAG+TGG | + | chr3_2:62264477-62264496 | None:intergenic | 30.0% | |
| ACCATACAGATATAAGATTG+GGG | - | chr3_2:62264778-62264797 | Msa0415810:CDS | 30.0% | |
| ! | CTTGTTATAAGTTCTCAGAA+AGG | - | chr3_2:62264839-62264858 | Msa0415810:CDS | 30.0% |
| !!! | TGAATTGTTTTGAAGAACTC+GGG | - | chr3_2:62265209-62265228 | Msa0415810:intron | 30.0% |
| ! | CACTTTTAACAAGTCAGATT+TGG | + | chr3_2:62265918-62265937 | None:intergenic | 30.0% |
| ! | TTAAAAGTGTAATTTCGTGG+AGG | - | chr3_2:62265929-62265948 | Msa0415810:intron | 30.0% |
| ! | TAAAAGTGTAATTTCGTGGA+GGG | - | chr3_2:62265930-62265949 | Msa0415810:intron | 30.0% |
| TAACCTCTCTAATATGAAGA+AGG | - | chr3_2:62266337-62266356 | Msa0415810:CDS | 30.0% | |
| AACCTCTCTAATATGAAGAA+GGG | - | chr3_2:62266338-62266357 | Msa0415810:CDS | 30.0% | |
| TCTAATATGAAGAAGGGATA+AGG | - | chr3_2:62266344-62266363 | Msa0415810:CDS | 30.0% | |
| ACATCACACAATACAATAAG+TGG | + | chr3_2:62266381-62266400 | None:intergenic | 30.0% | |
| TGTGATGTGATTATCATTTG+TGG | - | chr3_2:62266393-62266412 | Msa0415810:CDS | 30.0% | |
| AAAACTTCATCTCCAGTAAA+GGG | + | chr3_2:62266434-62266453 | None:intergenic | 30.0% | |
| !!! | GAATGAGAGTTTTGTTTGAG+TGG | + | chr3_2:62264176-62264195 | None:intergenic | 35.0% |
| ACACACAATAATGGTTGCTT+TGG | - | chr3_2:62264236-62264255 | Msa0415810:three_prime_UTR | 35.0% | |
| CCAGTATCAGAAATGAAAAG+GGG | + | chr3_2:62264362-62264381 | None:intergenic | 35.0% | |
| CCCAGTATCAGAAATGAAAA+GGG | + | chr3_2:62264363-62264382 | None:intergenic | 35.0% | |
| ! | CCCTTTTCATTTCTGATACT+GGG | - | chr3_2:62264360-62264379 | Msa0415810:three_prime_UTR | 35.0% |
| ACCCAGTATCAGAAATGAAA+AGG | + | chr3_2:62264364-62264383 | None:intergenic | 35.0% | |
| ! | CTCAGAGTTTTACAGAATCA+CGG | - | chr3_2:62264572-62264591 | Msa0415810:three_prime_UTR | 35.0% |
| ! | ACGTGATTTTGTCAAACTCA+CGG | - | chr3_2:62264644-62264663 | Msa0415810:three_prime_UTR | 35.0% |
| TCCCCAATCTTATATCTGTA+TGG | + | chr3_2:62264782-62264801 | None:intergenic | 35.0% | |
| GATTGGGGAGAAAAATTCAT+TGG | - | chr3_2:62264793-62264812 | Msa0415810:CDS | 35.0% | |
| ATAAGTTCTCAGAAAGGGAA+AGG | - | chr3_2:62264845-62264864 | Msa0415810:CDS | 35.0% | |
| TAAGTTCTCAGAAAGGGAAA+GGG | - | chr3_2:62264846-62264865 | Msa0415810:CDS | 35.0% | |
| TTGCTTACTAAATAACAGGG+AGG | - | chr3_2:62264960-62264979 | Msa0415810:intron | 35.0% | |
| TTACTAAATAACAGGGAGGT+TGG | - | chr3_2:62264964-62264983 | Msa0415810:intron | 35.0% | |
| TACTAAATAACAGGGAGGTT+GGG | - | chr3_2:62264965-62264984 | Msa0415810:intron | 35.0% | |
| AATTCCTCTTGAACAAGTAG+AGG | + | chr3_2:62265398-62265417 | None:intergenic | 35.0% | |
| TCTACTTGTTCAAGAGGAAT+TGG | - | chr3_2:62265397-62265416 | Msa0415810:intron | 35.0% | |
| AAAACCTTCGTCAAAGAAGA+TGG | - | chr3_2:62265435-62265454 | Msa0415810:intron | 35.0% | |
| AAACCTTCGTCAAAGAAGAT+GGG | - | chr3_2:62265436-62265455 | Msa0415810:intron | 35.0% | |
| ! | CAAGTTTTTGACCTAAGAGA+CGG | + | chr3_2:62265850-62265869 | None:intergenic | 35.0% |
| GATTTGTGCTAATGTAAGAG+AGG | - | chr3_2:62266289-62266308 | Msa0415810:intron | 35.0% | |
| ATCCCTTCTTCATATTAGAG+AGG | + | chr3_2:62266343-62266362 | None:intergenic | 35.0% | |
| ATAAGTTCTGTTCCCTTTAC+TGG | - | chr3_2:62266419-62266438 | Msa0415810:exon | 35.0% | |
| CAAAACTTCATCTCCAGTAA+AGG | + | chr3_2:62266435-62266454 | None:intergenic | 35.0% | |
| !!! | GAATGAGAGTTTTGTTTGAG+TGG | + | chr3_2:62264176-62264195 | None:intergenic | 35.0% |
| ACACACAATAATGGTTGCTT+TGG | - | chr3_2:62264236-62264255 | Msa0415810:three_prime_UTR | 35.0% | |
| CCAGTATCAGAAATGAAAAG+GGG | + | chr3_2:62264362-62264381 | None:intergenic | 35.0% | |
| CCCAGTATCAGAAATGAAAA+GGG | + | chr3_2:62264363-62264382 | None:intergenic | 35.0% | |
| ! | CCCTTTTCATTTCTGATACT+GGG | - | chr3_2:62264360-62264379 | Msa0415810:three_prime_UTR | 35.0% |
| ACCCAGTATCAGAAATGAAA+AGG | + | chr3_2:62264364-62264383 | None:intergenic | 35.0% | |
| ! | CTCAGAGTTTTACAGAATCA+CGG | - | chr3_2:62264572-62264591 | Msa0415810:three_prime_UTR | 35.0% |
| ! | ACGTGATTTTGTCAAACTCA+CGG | - | chr3_2:62264644-62264663 | Msa0415810:three_prime_UTR | 35.0% |
| TCCCCAATCTTATATCTGTA+TGG | + | chr3_2:62264782-62264801 | None:intergenic | 35.0% | |
| GATTGGGGAGAAAAATTCAT+TGG | - | chr3_2:62264793-62264812 | Msa0415810:CDS | 35.0% | |
| ATAAGTTCTCAGAAAGGGAA+AGG | - | chr3_2:62264845-62264864 | Msa0415810:CDS | 35.0% | |
| TAAGTTCTCAGAAAGGGAAA+GGG | - | chr3_2:62264846-62264865 | Msa0415810:CDS | 35.0% | |
| TTGCTTACTAAATAACAGGG+AGG | - | chr3_2:62264960-62264979 | Msa0415810:intron | 35.0% | |
| TTACTAAATAACAGGGAGGT+TGG | - | chr3_2:62264964-62264983 | Msa0415810:intron | 35.0% | |
| TACTAAATAACAGGGAGGTT+GGG | - | chr3_2:62264965-62264984 | Msa0415810:intron | 35.0% | |
| AATTCCTCTTGAACAAGTAG+AGG | + | chr3_2:62265398-62265417 | None:intergenic | 35.0% | |
| TCTACTTGTTCAAGAGGAAT+TGG | - | chr3_2:62265397-62265416 | Msa0415810:intron | 35.0% | |
| AAAACCTTCGTCAAAGAAGA+TGG | - | chr3_2:62265435-62265454 | Msa0415810:intron | 35.0% | |
| AAACCTTCGTCAAAGAAGAT+GGG | - | chr3_2:62265436-62265455 | Msa0415810:intron | 35.0% | |
| ! | CAAGTTTTTGACCTAAGAGA+CGG | + | chr3_2:62265850-62265869 | None:intergenic | 35.0% |
| GATTTGTGCTAATGTAAGAG+AGG | - | chr3_2:62266289-62266308 | Msa0415810:intron | 35.0% | |
| ATCCCTTCTTCATATTAGAG+AGG | + | chr3_2:62266343-62266362 | None:intergenic | 35.0% | |
| ATAAGTTCTGTTCCCTTTAC+TGG | - | chr3_2:62266419-62266438 | Msa0415810:exon | 35.0% | |
| CAAAACTTCATCTCCAGTAA+AGG | + | chr3_2:62266435-62266454 | None:intergenic | 35.0% | |
| ! | CCCCTTTTCATTTCTGATAC+TGG | - | chr3_2:62264359-62264378 | Msa0415810:three_prime_UTR | 40.0% |
| ! | TGACTTTCATTGTGGGGTTT+TGG | - | chr3_2:62264431-62264450 | Msa0415810:three_prime_UTR | 40.0% |
| ! | CGTGATTTTGTCAAACTCAC+GGG | - | chr3_2:62264645-62264664 | Msa0415810:three_prime_UTR | 40.0% |
| !! | GAAAGGGATGCTATTTCCAA+AGG | - | chr3_2:62264862-62264881 | Msa0415810:CDS | 40.0% |
| !! | ATGTTACTATTGCTTGGTGC+AGG | - | chr3_2:62265307-62265326 | Msa0415810:CDS | 40.0% |
| !! | TGTTACTATTGCTTGGTGCA+GGG | - | chr3_2:62265308-62265327 | Msa0415810:CDS | 40.0% |
| TGCAGGGTAAATTGGGTAAA+TGG | - | chr3_2:62265324-62265343 | Msa0415810:CDS | 40.0% | |
| GTTTCCTCTACTTGTTCAAG+AGG | - | chr3_2:62265391-62265410 | Msa0415810:intron | 40.0% | |
| TTCAAGAGGAATTGGAGTTC+TGG | - | chr3_2:62265405-62265424 | Msa0415810:intron | 40.0% | |
| !!! | CTTTGACGAAGGTTTTGTTC+AGG | + | chr3_2:62265431-62265450 | None:intergenic | 40.0% |
| TTACCCATCTTCTTTGACGA+AGG | + | chr3_2:62265442-62265461 | None:intergenic | 40.0% | |
| CAAGAGATGTTTGTCAACAC+TGG | - | chr3_2:62265792-62265811 | Msa0415810:CDS | 40.0% | |
| AGACTAGTAAACCGTCTCTT+AGG | - | chr3_2:62265836-62265855 | Msa0415810:CDS | 40.0% | |
| CGTCTCTTAGGTCAAAAACT+TGG | - | chr3_2:62265848-62265867 | Msa0415810:CDS | 40.0% | |
| CTACGTCCTCTAAATTGCAT+TGG | - | chr3_2:62265887-62265906 | Msa0415810:intron | 40.0% | |
| GCATCTCCAATGCAATTTAG+AGG | + | chr3_2:62265896-62265915 | None:intergenic | 40.0% | |
| !!! | TTTTGTGTTGCTTGAGGTTG+AGG | - | chr3_2:62265967-62265986 | Msa0415810:intron | 40.0% |
| AGGTTGAGGAGAAGAATAGT+AGG | - | chr3_2:62265981-62266000 | Msa0415810:intron | 40.0% | |
| ! | CCCCTTTTCATTTCTGATAC+TGG | - | chr3_2:62264359-62264378 | Msa0415810:three_prime_UTR | 40.0% |
| ! | TGACTTTCATTGTGGGGTTT+TGG | - | chr3_2:62264431-62264450 | Msa0415810:three_prime_UTR | 40.0% |
| ! | CGTGATTTTGTCAAACTCAC+GGG | - | chr3_2:62264645-62264664 | Msa0415810:three_prime_UTR | 40.0% |
| !! | GAAAGGGATGCTATTTCCAA+AGG | - | chr3_2:62264862-62264881 | Msa0415810:CDS | 40.0% |
| !! | ATGTTACTATTGCTTGGTGC+AGG | - | chr3_2:62265307-62265326 | Msa0415810:CDS | 40.0% |
| !! | TGTTACTATTGCTTGGTGCA+GGG | - | chr3_2:62265308-62265327 | Msa0415810:CDS | 40.0% |
| TGCAGGGTAAATTGGGTAAA+TGG | - | chr3_2:62265324-62265343 | Msa0415810:CDS | 40.0% | |
| GTTTCCTCTACTTGTTCAAG+AGG | - | chr3_2:62265391-62265410 | Msa0415810:intron | 40.0% | |
| TTCAAGAGGAATTGGAGTTC+TGG | - | chr3_2:62265405-62265424 | Msa0415810:intron | 40.0% | |
| !!! | CTTTGACGAAGGTTTTGTTC+AGG | + | chr3_2:62265431-62265450 | None:intergenic | 40.0% |
| TTACCCATCTTCTTTGACGA+AGG | + | chr3_2:62265442-62265461 | None:intergenic | 40.0% | |
| CAAGAGATGTTTGTCAACAC+TGG | - | chr3_2:62265792-62265811 | Msa0415810:CDS | 40.0% | |
| AGACTAGTAAACCGTCTCTT+AGG | - | chr3_2:62265836-62265855 | Msa0415810:CDS | 40.0% | |
| CGTCTCTTAGGTCAAAAACT+TGG | - | chr3_2:62265848-62265867 | Msa0415810:CDS | 40.0% | |
| CTACGTCCTCTAAATTGCAT+TGG | - | chr3_2:62265887-62265906 | Msa0415810:intron | 40.0% | |
| GCATCTCCAATGCAATTTAG+AGG | + | chr3_2:62265896-62265915 | None:intergenic | 40.0% | |
| !!! | TTTTGTGTTGCTTGAGGTTG+AGG | - | chr3_2:62265967-62265986 | Msa0415810:intron | 40.0% |
| AGGTTGAGGAGAAGAATAGT+AGG | - | chr3_2:62265981-62266000 | Msa0415810:intron | 40.0% | |
| !! | GTCACATTGGTTTCTCGTAC+TGG | - | chr3_2:62264276-62264295 | Msa0415810:three_prime_UTR | 45.0% |
| ! | AAAGGTCGTCGTCAAGTTGT+TGG | - | chr3_2:62264321-62264340 | Msa0415810:three_prime_UTR | 45.0% |
| ! | AAGGTCGTCGTCAAGTTGTT+GGG | - | chr3_2:62264322-62264341 | Msa0415810:three_prime_UTR | 45.0% |
| !! | AGCTTTGAGAGAAACCATGG+AGG | - | chr3_2:62265012-62265031 | Msa0415810:intron | 45.0% |
| !! | TTGCTTGGTGCAGGGTAAAT+TGG | - | chr3_2:62265316-62265335 | Msa0415810:CDS | 45.0% |
| !! | TGCTTGGTGCAGGGTAAATT+GGG | - | chr3_2:62265317-62265336 | Msa0415810:CDS | 45.0% |
| GAGATGTTTGTCAACACTGG+TGG | - | chr3_2:62265795-62265814 | Msa0415810:CDS | 45.0% | |
| ! | TCAACACTGGTGGATGAAAG+AGG | - | chr3_2:62265805-62265824 | Msa0415810:CDS | 45.0% |
| !! | GTCACATTGGTTTCTCGTAC+TGG | - | chr3_2:62264276-62264295 | Msa0415810:three_prime_UTR | 45.0% |
| ! | AAAGGTCGTCGTCAAGTTGT+TGG | - | chr3_2:62264321-62264340 | Msa0415810:three_prime_UTR | 45.0% |
| ! | AAGGTCGTCGTCAAGTTGTT+GGG | - | chr3_2:62264322-62264341 | Msa0415810:three_prime_UTR | 45.0% |
| !! | AGCTTTGAGAGAAACCATGG+AGG | - | chr3_2:62265012-62265031 | Msa0415810:intron | 45.0% |
| !! | TTGCTTGGTGCAGGGTAAAT+TGG | - | chr3_2:62265316-62265335 | Msa0415810:CDS | 45.0% |
| !! | TGCTTGGTGCAGGGTAAATT+GGG | - | chr3_2:62265317-62265336 | Msa0415810:CDS | 45.0% |
| GAGATGTTTGTCAACACTGG+TGG | - | chr3_2:62265795-62265814 | Msa0415810:CDS | 45.0% | |
| ! | TCAACACTGGTGGATGAAAG+AGG | - | chr3_2:62265805-62265824 | Msa0415810:CDS | 45.0% |
| !!! | ATTTTTTTTCAAAAAAAAAA+TGG | + | chr3_2:62264409-62264428 | None:intergenic | 5.0% |
| !!! | ATTTTTTTTCAAAAAAAAAA+TGG | + | chr3_2:62264409-62264428 | None:intergenic | 5.0% |
| !! | GGCAGCTTTGAGAGAAACCA+TGG | - | chr3_2:62265009-62265028 | Msa0415810:intron | 50.0% |
| AGAGAAACCATGGAGGAAGC+TGG | - | chr3_2:62265019-62265038 | Msa0415810:intron | 50.0% | |
| !! | TGGTGTACGAGGCATTGTTG+AGG | - | chr3_2:62265039-62265058 | Msa0415810:intron | 50.0% |
| ! | CTGGTGGATGAAAGAGGCTT+TGG | - | chr3_2:62265811-62265830 | Msa0415810:CDS | 50.0% |
| !! | GGCAGCTTTGAGAGAAACCA+TGG | - | chr3_2:62265009-62265028 | Msa0415810:intron | 50.0% |
| AGAGAAACCATGGAGGAAGC+TGG | - | chr3_2:62265019-62265038 | Msa0415810:intron | 50.0% | |
| !! | TGGTGTACGAGGCATTGTTG+AGG | - | chr3_2:62265039-62265058 | Msa0415810:intron | 50.0% |
| ! | CTGGTGGATGAAAGAGGCTT+TGG | - | chr3_2:62265811-62265830 | Msa0415810:CDS | 50.0% |
| TCGTACACCAGCTTCCTCCA+TGG | + | chr3_2:62265029-62265048 | None:intergenic | 55.0% | |
| ATGGAGGAAGCTGGTGTACG+AGG | - | chr3_2:62265028-62265047 | Msa0415810:intron | 55.0% | |
| TCGTACACCAGCTTCCTCCA+TGG | + | chr3_2:62265029-62265048 | None:intergenic | 55.0% | |
| ATGGAGGAAGCTGGTGTACG+AGG | - | chr3_2:62265028-62265047 | Msa0415810:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 62264165 | 62266509 | 62264165 | ID=Msa0415810;Name=Msa0415810 |
| chr3_2 | mRNA | 62264165 | 62266509 | 62264165 | ID=Msa0415810-mRNA-1;Parent=Msa0415810;Name=Msa0415810-mRNA-1;_AED=0.20;_eAED=0.20;_QI=81|0.75|0.8|1|1|1|5|569|184 |
| chr3_2 | exon | 62264165 | 62264898 | 62264165 | ID=Msa0415810-mRNA-1:exon:13374;Parent=Msa0415810-mRNA-1 |
| chr3_2 | exon | 62265217 | 62265345 | 62265217 | ID=Msa0415810-mRNA-1:exon:13373;Parent=Msa0415810-mRNA-1 |
| chr3_2 | exon | 62265614 | 62265664 | 62265614 | ID=Msa0415810-mRNA-1:exon:13372;Parent=Msa0415810-mRNA-1 |
| chr3_2 | exon | 62265791 | 62265902 | 62265791 | ID=Msa0415810-mRNA-1:exon:13371;Parent=Msa0415810-mRNA-1 |
| chr3_2 | exon | 62266331 | 62266509 | 62266331 | ID=Msa0415810-mRNA-1:exon:13370;Parent=Msa0415810-mRNA-1 |
| chr3_2 | five_prime_UTR | 62266429 | 62266509 | 62266429 | ID=Msa0415810-mRNA-1:five_prime_utr;Parent=Msa0415810-mRNA-1 |
| chr3_2 | CDS | 62266331 | 62266428 | 62266331 | ID=Msa0415810-mRNA-1:cds;Parent=Msa0415810-mRNA-1 |
| chr3_2 | CDS | 62265791 | 62265902 | 62265791 | ID=Msa0415810-mRNA-1:cds;Parent=Msa0415810-mRNA-1 |
| chr3_2 | CDS | 62265614 | 62265664 | 62265614 | ID=Msa0415810-mRNA-1:cds;Parent=Msa0415810-mRNA-1 |
| chr3_2 | CDS | 62265217 | 62265345 | 62265217 | ID=Msa0415810-mRNA-1:cds;Parent=Msa0415810-mRNA-1 |
| chr3_2 | CDS | 62264734 | 62264898 | 62264734 | ID=Msa0415810-mRNA-1:cds;Parent=Msa0415810-mRNA-1 |
| chr3_2 | three_prime_UTR | 62264165 | 62264733 | 62264165 | ID=Msa0415810-mRNA-1:three_prime_utr;Parent=Msa0415810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
