AlfalfaGEDB | Msa1312240

M. sativa cultivar zhongmu-4 / Msa1312240

KEGG: -
GO: GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007623 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048511 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
PFAM: PF00320.30

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1312240	sp\|O82632\|GATA9_ARATH	47.416	329	122	13	33	346	16	308	8.30e-80	249

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1312240	G7LFY2	97.406	347	3	2	1	346	1	342	0.0	696

TFs/TRs:

Gene ID	Type	Classification
Msa1312240	TF	C2C2-GATA

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0006840	Msa1312240	0.826077	3.306382e-54	-8.615850e-47
Msa0013410	Msa1312240	0.807544	4.799988e-50	-8.615850e-47
Msa0032130	Msa1312240	0.802206	6.263116e-49	-8.615850e-47
Msa0032390	Msa1312240	0.802268	6.080465e-49	-8.615850e-47
Msa0045620	Msa1312240	0.862421	5.128624e-64	-8.615850e-47
Msa0050530	Msa1312240	0.812885	3.384120e-51	-8.615850e-47
Msa0100600	Msa1312240	0.826222	3.053457e-54	-8.615850e-47
Msa0100890	Msa1312240	0.826979	2.015076e-54	-8.615850e-47
Msa0623310	Msa1312240	0.866416	2.897073e-65	-8.615850e-47
Msa0626980	Msa1312240	0.834998	2.166808e-56	-8.615850e-47
Msa0627360	Msa1312240	0.834299	3.248512e-56	-8.615850e-47
Msa0673940	Msa1312240	0.845676	3.500764e-59	-8.615850e-47
Msa0688620	Msa1312240	0.806142	9.497856e-50	-8.615850e-47
Msa0708020	Msa1312240	0.823299	1.492698e-53	-8.615850e-47
Msa0749190	Msa1312240	0.805150	1.533519e-49	-8.615850e-47
Msa0750520	Msa1312240	0.808485	3.026252e-50	-8.615850e-47
Msa0751720	Msa1312240	0.810826	9.501488e-51	-8.615850e-47
Msa0831820	Msa1312240	0.840814	6.932850e-58	-8.615850e-47
Msa0147680	Msa1312240	0.818634	1.769835e-52	-8.615850e-47
Msa0185690	Msa1312240	0.807898	4.036555e-50	-8.615850e-47
Msa0235080	Msa1312240	0.803460	3.449169e-49	-8.615850e-47
Msa1231490	Msa1312240	0.841603	4.300058e-58	-8.615850e-47
Msa1240060	Msa1312240	0.822830	1.920471e-53	-8.615850e-47
Msa1278030	Msa1312240	0.889720	1.880587e-73	-8.615850e-47
Msa1281370	Msa1312240	0.808526	2.966412e-50	-8.615850e-47
Msa1312240	Msa1320530	0.803063	4.168762e-49	-8.615850e-47
Msa1312240	Msa1362590	0.840052	1.096516e-57	-8.615850e-47
Msa1312240	Msa1368170	0.814731	1.326849e-51	-8.615850e-47
Msa1312240	Msa1371800	0.862993	3.418381e-64	-8.615850e-47
Msa1312240	Msa1372030	0.840442	8.675405e-58	-8.615850e-47
Msa1312240	Msa1376310	0.860637	1.798283e-63	-8.615850e-47
Msa1312240	Msa1381800	0.802751	4.836164e-49	-8.615850e-47
Msa1312240	Msa1385570	0.836371	9.731196e-57	-8.615850e-47
Msa1312240	Msa1398490	0.803876	2.827801e-49	-8.615850e-47
Msa1312240	Msa1417950	0.819221	1.301259e-52	-8.615850e-47
Msa1312240	Msa1420830	0.827495	1.516114e-54	-8.615850e-47
Msa1312240	Msa1438510	0.809761	1.612686e-50	-8.615850e-47
Msa1312240	Msa1447900	0.803352	3.632085e-49	-8.615850e-47
Msa1312240	Msa1454410	0.802487	5.481908e-49	-8.615850e-47
Msa1312240	Msa1460970	0.831830	1.336590e-55	-8.615850e-47
Msa0416210	Msa1312240	0.836972	6.838794e-57	-8.615850e-47
Msa0433630	Msa1312240	0.800303	1.535228e-48	-8.615850e-47
Msa0464050	Msa1312240	0.801986	6.949030e-49	-8.615850e-47
Msa1008850	Msa1312240	0.805221	1.482374e-49	-8.615850e-47
Msa1021560	Msa1312240	0.805187	1.506908e-49	-8.615850e-47
Msa1026710	Msa1312240	0.820577	6.372362e-53	-8.615850e-47
Msa1033420	Msa1312240	0.805001	1.647642e-49	-8.615850e-47
Msa1060300	Msa1312240	0.803601	3.224554e-49	-8.615850e-47
Msa1071410	Msa1312240	0.808135	3.594354e-50	-8.615850e-47
Msa1073060	Msa1312240	0.806137	9.518738e-50	-8.615850e-47
Msa1085680	Msa1312240	0.804236	2.379816e-49	-8.615850e-47
Msa1105540	Msa1312240	0.810568	1.080483e-50	-8.615850e-47
Msa1105580	Msa1312240	0.805823	1.108198e-49	-8.615850e-47
Msa0260630	Msa1312240	0.800359	1.495599e-48	-8.615850e-47
Msa0336430	Msa1312240	0.812817	3.502518e-51	-8.615850e-47
Msa0336520	Msa1312240	0.835976	1.226336e-56	-8.615850e-47
Msa1130770	Msa1312240	0.811693	6.163211e-51	-8.615850e-47
Msa1138800	Msa1312240	0.806973	6.341520e-50	-8.615850e-47
Msa1144990	Msa1312240	0.818730	1.682948e-52	-8.615850e-47
Msa1148930	Msa1312240	0.812040	5.178754e-51	-8.615850e-47
Msa1180840	Msa1312240	0.834428	3.014924e-56	-8.615850e-47
Msa0530660	Msa1312240	0.835587	1.538751e-56	-8.615850e-47
Msa0571350	Msa1312240	0.817672	2.920770e-52	-8.615850e-47
Msa0576330	Msa1312240	0.801905	7.220127e-49	-8.615850e-47
Msa0587180	Msa1312240	0.843353	1.476549e-58	-8.615850e-47
Msa0844400	Msa1312240	0.804344	2.260269e-49	-8.615850e-47
Msa0846900	Msa1312240	0.825927	3.589501e-54	-8.615850e-47
Msa0929900	Msa1312240	0.808688	2.738496e-50	-8.615850e-47
Msa0945900	Msa1312240	0.811695	6.155490e-51	-8.615850e-47
Msa0978980	Msa1312240	0.808090	3.674729e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1312240	MtrunA17_Chr8g0340401	97.406	347	3	2	1	346	1	342	0.0	696
Msa1312240	MtrunA17_Chr1g0146231	45.906	342	132	12	35	346	26	344	8.30e-81	249
Msa1312240	MtrunA17_Chr3g0140331	44.474	371	128	11	1	346	47	364	6.42e-80	248
Msa1312240	MtrunA17_Chr8g0372291	39.502	281	119	8	31	294	41	287	9.50e-48	162
Msa1312240	MtrunA17_Chr4g0035891	39.146	281	113	11	33	294	39	280	7.09e-43	150
Msa1312240	MtrunA17_Chr5g0404981	40.336	238	80	6	101	294	150	369	8.99e-41	147
Msa1312240	MtrunA17_Chr3g0145121	37.276	279	125	8	33	294	39	284	1.25e-39	142
Msa1312240	MtrunA17_Chr6g0461591	39.316	234	76	10	114	291	35	258	1.21e-35	130
Msa1312240	MtrunA17_Chr1g0169431	58.824	119	44	3	178	294	126	241	4.12e-35	128
Msa1312240	MtrunA17_Chr5g0395391	76.389	72	17	0	224	295	269	340	3.29e-33	125
Msa1312240	MtrunA17_Chr5g0395391	76.923	65	15	0	224	288	167	231	3.96e-29	114
Msa1312240	MtrunA17_Chr1g0199671	72.973	74	20	0	225	298	242	315	7.93e-33	124
Msa1312240	MtrunA17_Chr7g0253101	75.385	65	16	0	225	289	188	252	4.46e-31	118
Msa1312240	MtrunA17_Chr4g0028961	64.198	81	29	0	211	291	218	298	6.41e-30	116
Msa1312240	MtrunA17_Chr1g0213161	69.333	75	21	1	225	297	152	226	1.31e-29	113
Msa1312240	MtrunA17_Chr2g0326771	75.385	65	16	0	225	289	216	280	2.26e-29	115
Msa1312240	MtrunA17_Chr7g0232671	53.947	76	34	1	212	286	173	248	3.49e-21	91.3
Msa1312240	MtrunA17_Chr7g0232681	31.492	181	107	4	106	286	30	193	3.03e-19	84.7
Msa1312240	MtrunA17_Chr7g0232701	56.452	62	27	0	225	286	73	134	2.40e-18	80.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1312240	AT4G32890.1	47.416	329	122	13	33	346	16	308	8.44e-81	249
Msa1312240	AT5G25830.1	43.681	364	107	15	35	346	14	331	5.77e-72	227
Msa1312240	AT3G60530.1	48.792	207	58	8	100	297	63	230	1.37e-48	164
Msa1312240	AT2G45050.1	44.954	218	67	5	103	299	68	253	3.09e-48	163
Msa1312240	AT4G36240.1	38.889	270	104	9	35	292	11	231	7.44e-41	143
Msa1312240	AT5G66320.2	41.277	235	79	6	101	293	100	317	1.41e-40	145
Msa1312240	AT5G66320.1	41.277	235	79	6	101	293	100	317	1.41e-40	145
Msa1312240	AT4G34680.1	44.444	189	73	3	106	294	93	249	5.49e-39	139
Msa1312240	AT4G34680.2	44.444	189	73	3	106	294	93	249	5.49e-39	139
Msa1312240	AT1G08010.2	76.056	71	17	0	225	295	220	290	1.12e-33	126
Msa1312240	AT1G08010.1	76.056	71	17	0	225	295	220	290	1.12e-33	126
Msa1312240	AT1G08010.3	76.056	71	17	0	225	295	220	290	1.12e-33	126
Msa1312240	AT3G24050.1	77.941	68	15	0	224	291	193	260	2.15e-33	125
Msa1312240	AT3G54810.1	76.471	68	16	0	225	292	229	296	9.92e-32	122
Msa1312240	AT3G54810.2	76.471	68	16	0	225	292	229	296	9.92e-32	122
Msa1312240	AT3G51080.1	73.913	69	18	0	225	293	221	289	1.07e-30	119
Msa1312240	AT1G08000.2	74.627	67	17	0	225	291	218	284	1.44e-30	118
Msa1312240	AT1G08000.1	74.627	67	17	0	225	291	218	284	1.44e-30	118
Msa1312240	AT3G45170.1	57.143	77	33	0	217	293	107	183	5.63e-26	103
Msa1312240	AT2G28340.1	66.154	65	22	0	227	291	193	257	5.94e-25	102
Msa1312240	AT3G06740.1	32.039	103	45	2	225	312	41	133	8.19e-12	62.8

Find 94 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTCCTGGTAGAGGTGTTTC+TGG	0.198536	8_4:+9197969	None:intergenic
GGAAGAGTCGGTGGAATTTC+CGG	0.199866	8_4:+9198413	None:intergenic
CTCTTTACAGTATGATGATA+TGG	0.231727	8_4:-9198177	Msa1312240:intron
AGTGTAGCATAGTTTAATTT+AGG	0.264045	8_4:-9197439	Msa1312240:three_prime_UTR
GGAGGCACAATTGTTCCTTA+TGG	0.277726	8_4:-9198336	Msa1312240:CDS
GAATTCTCATAGGAAAGTTT+TGG	0.321671	8_4:-9197652	Msa1312240:CDS
GTGTAGCATAGTTTAATTTA+GGG	0.337935	8_4:-9197438	Msa1312240:three_prime_UTR
CGAATTTCGCGTTTACGAAA+TGG	0.338304	8_4:-9198610	Msa1312240:exon
GACGCTTCTCCGGCGAGAAT+TGG	0.338370	8_4:+9198541	None:intergenic
TCCTCACGCTTCTTCACAAT+TGG	0.355227	8_4:+9197861	None:intergenic
TTCCGGTGTTTGCGGTTTAA+CGG	0.362633	8_4:+9198064	None:intergenic
GAAAAGATAATGTAGAATTA+TGG	0.384344	8_4:-9197273	Msa1312240:three_prime_UTR
AGGCGCGTGGACCAGTCTCC+TGG	0.390187	8_4:+9197918	None:intergenic
CTTCCAGAACATTCCACATT+CGG	0.390638	8_4:+9197837	None:intergenic
GTATGATGATATGGCGGAAC+TGG	0.396674	8_4:-9198168	Msa1312240:CDS
GGCTCTGGTGATAACCGCTT+TGG	0.403590	8_4:-9198357	Msa1312240:CDS
GATCCGAATGTGGAATGTTC+TGG	0.407889	8_4:-9197840	Msa1312240:CDS
AGACATAATCGCGTCGGCAT+TGG	0.413357	8_4:+9198461	None:intergenic
AGCTGTAACTCCTCTGGCTC+TGG	0.437312	8_4:-9198372	Msa1312240:CDS
AAACGCTCACGCGCTGCTCC+AGG	0.438274	8_4:-9197936	Msa1312240:CDS
ATCAATTATCATCATCATTG+TGG	0.463155	8_4:-9197495	Msa1312240:CDS
AATTATGGCGAGGGGATAAG+AGG	0.464598	8_4:-9197258	Msa1312240:three_prime_UTR
TACTTTGTCGGTGGCTACTA+CGG	0.465894	8_4:-9198576	Msa1312240:CDS
AAGACGCCGCAGTGGAGAAC+AGG	0.467796	8_4:-9197789	Msa1312240:CDS
TGGTCACCGTGACGCTTCTC+CGG	0.476812	8_4:+9198531	None:intergenic
CGAAGCATTCGAATTCTCAT+AGG	0.477067	8_4:-9197662	Msa1312240:CDS
TCAATTATCATCATCATTGT+GGG	0.480828	8_4:-9197494	Msa1312240:CDS
TTGAGTGAAAGAGAGAATTG+AGG	0.481130	8_4:+9198674	None:intergenic
GAAGCACAAGATTACTTTGT+CGG	0.482794	8_4:-9198588	Msa1312240:CDS
CACCGGTGAACTCTGTGTTC+CGG	0.483064	8_4:-9198292	Msa1312240:intron
TCCGGTGATGTTCAACTCAC+CGG	0.487659	8_4:-9198309	Msa1312240:CDS
AAAACATTGCAACTTCTCTC+CGG	0.498282	8_4:-9198095	Msa1312240:CDS
GATGAAGATTCCGGTGTTTG+CGG	0.503689	8_4:+9198056	None:intergenic
TAAGTCCGGTAGGTTGGTGC+CGG	0.508279	8_4:-9197721	Msa1312240:CDS
TTGCAACTTCTCTCCGGCGC+CGG	0.510336	8_4:-9198089	Msa1312240:CDS
CAGTGGAGAACAGGACCAAT+GGG	0.512631	8_4:-9197780	Msa1312240:CDS
GAAATCAAGTAAATCATCAA+TGG	0.517205	8_4:+9198485	None:intergenic
GTTGACAGCTGTAACTCCTC+TGG	0.518284	8_4:-9198378	Msa1312240:CDS
TGCTTCGCCGATACAAAAGT+TGG	0.526129	8_4:+9197678	None:intergenic
CTCGCCGCCGGTCGATACTC+CGG	0.528513	8_4:+9197702	None:intergenic
TGTTTGCGGTTTAACGGCAC+CGG	0.530689	8_4:+9198070	None:intergenic
GTCGGTGGCTACTACGGTGC+CGG	0.534317	8_4:-9198570	Msa1312240:CDS
TCTGGTGATAACCGCTTTGG+AGG	0.541419	8_4:-9198354	Msa1312240:CDS
CTGGTAGAGGTGTTTCTGGA+CGG	0.544153	8_4:+9197973	None:intergenic
CGTCCAGAAACACCTCTACC+AGG	0.545940	8_4:-9197972	Msa1312240:CDS
GGAATGGCTTTCGAATTTCG+TGG	0.546230	8_4:-9198147	Msa1312240:CDS
ACCGGTGAGTTGAACATCAC+CGG	0.549777	8_4:+9198308	None:intergenic
TCGGTGGAAGATGAAGATTC+CGG	0.552072	8_4:+9198047	None:intergenic
TTCTTCGATAACAATGTCGC+CGG	0.552150	8_4:-9198432	Msa1312240:CDS
ATACTCCGGCACCAACCTAC+CGG	0.552745	8_4:+9197716	None:intergenic
GAGGTTTAAGTCCGGTAGGT+TGG	0.552850	8_4:-9197727	Msa1312240:CDS
GTTTCGTCGGTGGAGAATGA+AGG	0.553392	8_4:+9198017	None:intergenic
GCTGTCAACAGCGGTGACAT+TGG	0.554444	8_4:+9198392	None:intergenic
GCAGTGGAGAACAGGACCAA+TGG	0.555338	8_4:-9197781	Msa1312240:CDS
AGCGGTGACATTGGAAGAGT+CGG	0.570500	8_4:+9198401	None:intergenic
ATGATATGGCGGAACTGGAA+TGG	0.580000	8_4:-9198163	Msa1312240:CDS
ACAAAAGTTGGACTCGCCGC+CGG	0.580278	8_4:+9197690	None:intergenic
TGCCGTTAAACCGCAAACAC+CGG	0.582957	8_4:-9198066	Msa1312240:CDS
TACCGGAACACAGAGTTCAC+CGG	0.583290	8_4:+9198290	None:intergenic
TAAATTTGCCAAATTCAGCA+AGG	0.584504	8_4:+9197197	None:intergenic
GCGGTTATCACCAGAGCCAG+AGG	0.591133	8_4:+9198362	None:intergenic
TAGATAACATGTCTAAACTC+TGG	0.596187	8_4:+9197471	None:intergenic
GATAATGTAGAATTATGGCG+AGG	0.597104	8_4:-9197268	Msa1312240:three_prime_UTR
GTTGGTGCCGGAGTATCGAC+CGG	0.600084	8_4:-9197709	Msa1312240:CDS
GAATGAAGGAAGTGTGTCGG+TGG	0.610970	8_4:+9198031	None:intergenic
ATAATGTAGAATTATGGCGA+GGG	0.612762	8_4:-9197267	Msa1312240:three_prime_UTR
AGTAAATCATCAATGGCGAA+AGG	0.614239	8_4:+9198492	None:intergenic
TTCTCGCCGGAGAAGCGTCA+CGG	0.616797	8_4:-9198537	Msa1312240:CDS
TCAATGGCGAAAGGCTCACA+CGG	0.620341	8_4:+9198501	None:intergenic
GGGGAGATGTAGTAGGCGCG+TGG	0.625946	8_4:+9197905	None:intergenic
CGGCGAAAACCAATTCTCGC+CGG	0.631060	8_4:-9198550	Msa1312240:CDS
GCACAAGATTACTTTGTCGG+TGG	0.638723	8_4:-9198585	Msa1312240:CDS
GTTACGAGCAGTTTCGTCGG+TGG	0.641102	8_4:+9198007	None:intergenic
TGTGGTGTGAGGTTTAAGTC+CGG	0.641447	8_4:-9197735	Msa1312240:CDS
GTGTGAGGTTTAAGTCCGGT+AGG	0.641902	8_4:-9197731	Msa1312240:CDS
ACCGTCAGACATAATCGCGT+CGG	0.646289	8_4:+9198455	None:intergenic
AAAATGTCTCCACTGCGGCA+CGG	0.653917	8_4:-9197814	Msa1312240:CDS
GAAGCGTGAGGATCCGAATG+TGG	0.654903	8_4:-9197850	Msa1312240:CDS
AGCGTTACGAGCAGTTTCGT+CGG	0.655792	8_4:+9198004	None:intergenic
TAATGTAGAATTATGGCGAG+GGG	0.656295	8_4:-9197266	Msa1312240:three_prime_UTR
GGTGACATTGGAAGAGTCGG+TGG	0.674783	8_4:+9198404	None:intergenic
TATGCAATGCGTGTGGTGTG+AGG	0.675574	8_4:-9197746	Msa1312240:CDS
GGAGTTACAGCTGTCAACAG+CGG	0.684832	8_4:+9198383	None:intergenic
GCACGGATAAGACGCCGCAG+TGG	0.685559	8_4:-9197797	Msa1312240:CDS
GGAGAATGAAGGAAGTGTGT+CGG	0.695811	8_4:+9198028	None:intergenic
TTCGGCGTTTCATCTAACGG+TGG	0.696201	8_4:-9197528	Msa1312240:CDS
TTTACAGTATGATGATATGG+CGG	0.707206	8_4:-9198174	Msa1312240:intron
TCCAATTGTGAAGAAGCGTG+AGG	0.708916	8_4:-9197862	Msa1312240:CDS
GGTGCCGGAGTATCGACCGG+CGG	0.709828	8_4:-9197706	Msa1312240:CDS
GAACAATTGTGCCTCCAAAG+CGG	0.725448	8_4:+9198343	None:intergenic
AAAACACTATGCAATGCGTG+TGG	0.749100	8_4:-9197753	Msa1312240:CDS
ATTGGTCCTGTTCTCCACTG+CGG	0.754224	8_4:+9197783	None:intergenic
ATGGCGAAAGGCTCACACGG+TGG	0.757233	8_4:+9198504	None:intergenic
GGAAGAAAATGTCTCCACTG+CGG	0.780752	8_4:-9197819	Msa1312240:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTAAACTATTTTCTGCTT+TGG	-	chr8_4:9198508-9198527	Msa1312240:CDS	20.0%
!!	GAAAAGATAATGTAGAATTA+TGG	-	chr8_4:9198613-9198632	Msa1312240:exon	20.0%
!!!	TTTTAAACTATTTTCTGCTT+TGG	-	chr8_4:9198508-9198527	Msa1312240:CDS	20.0%
!!	GAAAAGATAATGTAGAATTA+TGG	-	chr8_4:9198613-9198632	Msa1312240:exon	20.0%
!	GAAATCAAGTAAATCATCAA+TGG	+	chr8_4:9197404-9197423	None:intergenic	25.0%
!	TTAGTGACATTATTACTTAC+CGG	+	chr8_4:9197616-9197635	None:intergenic	25.0%
!	ATCAATTATCATCATCATTG+TGG	-	chr8_4:9198391-9198410	Msa1312240:CDS	25.0%
!	TCAATTATCATCATCATTGT+GGG	-	chr8_4:9198392-9198411	Msa1312240:CDS	25.0%
!!	AGTGTAGCATAGTTTAATTT+AGG	-	chr8_4:9198447-9198466	Msa1312240:CDS	25.0%
!!	GTGTAGCATAGTTTAATTTA+GGG	-	chr8_4:9198448-9198467	Msa1312240:CDS	25.0%
!!!	ATTTGAGCTTTTTCCTTTAA+AGG	-	chr8_4:9198588-9198607	Msa1312240:CDS	25.0%
!!!	TTTGAGCTTTTTCCTTTAAA+GGG	-	chr8_4:9198589-9198608	Msa1312240:CDS	25.0%
!!	ATTATTTTCCTTGCTGAATT+TGG	-	chr8_4:9198681-9198700	Msa1312240:five_prime_UTR	25.0%
!	GAAATCAAGTAAATCATCAA+TGG	+	chr8_4:9197404-9197423	None:intergenic	25.0%
!	TTAGTGACATTATTACTTAC+CGG	+	chr8_4:9197616-9197635	None:intergenic	25.0%
!	ATCAATTATCATCATCATTG+TGG	-	chr8_4:9198391-9198410	Msa1312240:CDS	25.0%
!	TCAATTATCATCATCATTGT+GGG	-	chr8_4:9198392-9198411	Msa1312240:CDS	25.0%
!!	AGTGTAGCATAGTTTAATTT+AGG	-	chr8_4:9198447-9198466	Msa1312240:CDS	25.0%
!!	GTGTAGCATAGTTTAATTTA+GGG	-	chr8_4:9198448-9198467	Msa1312240:CDS	25.0%
!!!	ATTTGAGCTTTTTCCTTTAA+AGG	-	chr8_4:9198588-9198607	Msa1312240:CDS	25.0%
!!!	TTTGAGCTTTTTCCTTTAAA+GGG	-	chr8_4:9198589-9198608	Msa1312240:CDS	25.0%
!!	ATTATTTTCCTTGCTGAATT+TGG	-	chr8_4:9198681-9198700	Msa1312240:five_prime_UTR	25.0%
!	ATTGTTCCTTATGGTTTTTC+CGG	-	chr8_4:9197559-9197578	Msa1312240:CDS	30.0%
	ACTTCAACTATCATCAATTG+CGG	+	chr8_4:9197654-9197673	None:intergenic	30.0%
	CTCTTTACAGTATGATGATA+TGG	-	chr8_4:9197709-9197728	Msa1312240:CDS	30.0%
	TTTACAGTATGATGATATGG+CGG	-	chr8_4:9197712-9197731	Msa1312240:CDS	30.0%
!	TGTTTTCAATTCTTCTTCAG+CGG	+	chr8_4:9197777-9197796	None:intergenic	30.0%
!	TTCACAATTGGATAGCTTTT+CGG	+	chr8_4:9198016-9198035	None:intergenic	30.0%
!	GAATTCTCATAGGAAAGTTT+TGG	-	chr8_4:9198234-9198253	Msa1312240:intron	30.0%
	TAGATAACATGTCTAAACTC+TGG	+	chr8_4:9198418-9198437	None:intergenic	30.0%
!!	TTGAGCTTTTTCCTTTAAAG+GGG	-	chr8_4:9198590-9198609	Msa1312240:CDS	30.0%
!	ATTATCTTTTCCCCCTTTAA+AGG	+	chr8_4:9198604-9198623	None:intergenic	30.0%
	ATAATGTAGAATTATGGCGA+GGG	-	chr8_4:9198619-9198638	Msa1312240:five_prime_UTR	30.0%
!	ATTGTTCCTTATGGTTTTTC+CGG	-	chr8_4:9197559-9197578	Msa1312240:CDS	30.0%
	ACTTCAACTATCATCAATTG+CGG	+	chr8_4:9197654-9197673	None:intergenic	30.0%
	CTCTTTACAGTATGATGATA+TGG	-	chr8_4:9197709-9197728	Msa1312240:CDS	30.0%
	TTTACAGTATGATGATATGG+CGG	-	chr8_4:9197712-9197731	Msa1312240:CDS	30.0%
!	TGTTTTCAATTCTTCTTCAG+CGG	+	chr8_4:9197777-9197796	None:intergenic	30.0%
!	TTCACAATTGGATAGCTTTT+CGG	+	chr8_4:9198016-9198035	None:intergenic	30.0%
!	GAATTCTCATAGGAAAGTTT+TGG	-	chr8_4:9198234-9198253	Msa1312240:intron	30.0%
	TAGATAACATGTCTAAACTC+TGG	+	chr8_4:9198418-9198437	None:intergenic	30.0%
!!	TTGAGCTTTTTCCTTTAAAG+GGG	-	chr8_4:9198590-9198609	Msa1312240:CDS	30.0%
!	ATTATCTTTTCCCCCTTTAA+AGG	+	chr8_4:9198604-9198623	None:intergenic	30.0%
	ATAATGTAGAATTATGGCGA+GGG	-	chr8_4:9198619-9198638	Msa1312240:five_prime_UTR	30.0%
	TTGAGTGAAAGAGAGAATTG+AGG	+	chr8_4:9197215-9197234	None:intergenic	35.0%
	GAAGCACAAGATTACTTTGT+CGG	-	chr8_4:9197298-9197317	Msa1312240:three_prime_UTR	35.0%
	AGTAAATCATCAATGGCGAA+AGG	+	chr8_4:9197397-9197416	None:intergenic	35.0%
	AAAACATTGCAACTTCTCTC+CGG	-	chr8_4:9197791-9197810	Msa1312240:CDS	35.0%
!	CTGAGTCACAGTTCAATTTT+CGG	-	chr8_4:9198340-9198359	Msa1312240:CDS	35.0%
!	ATTTTCGGCGTTTCATCTAA+CGG	-	chr8_4:9198355-9198374	Msa1312240:CDS	35.0%
!!	TGAGCTTTTTCCTTTAAAGG+GGG	-	chr8_4:9198591-9198610	Msa1312240:CDS	35.0%
	GATAATGTAGAATTATGGCG+AGG	-	chr8_4:9198618-9198637	Msa1312240:five_prime_UTR	35.0%
	TAATGTAGAATTATGGCGAG+GGG	-	chr8_4:9198620-9198639	Msa1312240:five_prime_UTR	35.0%
	TTGAGTGAAAGAGAGAATTG+AGG	+	chr8_4:9197215-9197234	None:intergenic	35.0%
	GAAGCACAAGATTACTTTGT+CGG	-	chr8_4:9197298-9197317	Msa1312240:three_prime_UTR	35.0%
	AGTAAATCATCAATGGCGAA+AGG	+	chr8_4:9197397-9197416	None:intergenic	35.0%
	AAAACATTGCAACTTCTCTC+CGG	-	chr8_4:9197791-9197810	Msa1312240:CDS	35.0%
!	CTGAGTCACAGTTCAATTTT+CGG	-	chr8_4:9198340-9198359	Msa1312240:CDS	35.0%
!	ATTTTCGGCGTTTCATCTAA+CGG	-	chr8_4:9198355-9198374	Msa1312240:CDS	35.0%
!!	TGAGCTTTTTCCTTTAAAGG+GGG	-	chr8_4:9198591-9198610	Msa1312240:CDS	35.0%
	GATAATGTAGAATTATGGCG+AGG	-	chr8_4:9198618-9198637	Msa1312240:five_prime_UTR	35.0%
	TAATGTAGAATTATGGCGAG+GGG	-	chr8_4:9198620-9198639	Msa1312240:five_prime_UTR	35.0%
	CGAATTTCGCGTTTACGAAA+TGG	-	chr8_4:9197276-9197295	Msa1312240:three_prime_UTR	40.0%
	TTCTTCGATAACAATGTCGC+CGG	-	chr8_4:9197454-9197473	Msa1312240:exon	40.0%
	ACATCACCGGAAAAACCATA+AGG	+	chr8_4:9197568-9197587	None:intergenic	40.0%
!	ACAATTGGATAGCTTTTCGG+TGG	+	chr8_4:9198013-9198032	None:intergenic	40.0%
	CTTCCAGAACATTCCACATT+CGG	+	chr8_4:9198052-9198071	None:intergenic	40.0%
!!!	CATAGTGTTTTTGGTCCCAT+TGG	+	chr8_4:9198124-9198143	None:intergenic	40.0%
!	CACGCATTGCATAGTGTTTT+TGG	+	chr8_4:9198133-9198152	None:intergenic	40.0%
	AAAACACTATGCAATGCGTG+TGG	-	chr8_4:9198133-9198152	Msa1312240:CDS	40.0%
!	CGAAGCATTCGAATTCTCAT+AGG	-	chr8_4:9198224-9198243	Msa1312240:intron	40.0%
	AGAGAGAATTGAGGAATGTG+TGG	+	chr8_4:9197206-9197225	None:intergenic	40.0%
	CGAATTTCGCGTTTACGAAA+TGG	-	chr8_4:9197276-9197295	Msa1312240:three_prime_UTR	40.0%
	TTCTTCGATAACAATGTCGC+CGG	-	chr8_4:9197454-9197473	Msa1312240:exon	40.0%
	ACATCACCGGAAAAACCATA+AGG	+	chr8_4:9197568-9197587	None:intergenic	40.0%
!	ACAATTGGATAGCTTTTCGG+TGG	+	chr8_4:9198013-9198032	None:intergenic	40.0%
	CTTCCAGAACATTCCACATT+CGG	+	chr8_4:9198052-9198071	None:intergenic	40.0%
!!!	CATAGTGTTTTTGGTCCCAT+TGG	+	chr8_4:9198124-9198143	None:intergenic	40.0%
!	CACGCATTGCATAGTGTTTT+TGG	+	chr8_4:9198133-9198152	None:intergenic	40.0%
	AAAACACTATGCAATGCGTG+TGG	-	chr8_4:9198133-9198152	Msa1312240:CDS	40.0%
!	CGAAGCATTCGAATTCTCAT+AGG	-	chr8_4:9198224-9198243	Msa1312240:intron	40.0%
	GCACAAGATTACTTTGTCGG+TGG	-	chr8_4:9197301-9197320	Msa1312240:three_prime_UTR	45.0%
	TACTTTGTCGGTGGCTACTA+CGG	-	chr8_4:9197310-9197329	Msa1312240:three_prime_UTR	45.0%
	GAACAATTGTGCCTCCAAAG+CGG	+	chr8_4:9197546-9197565	None:intergenic	45.0%
!	GGAGGCACAATTGTTCCTTA+TGG	-	chr8_4:9197550-9197569	Msa1312240:CDS	45.0%
!	GTATGATGATATGGCGGAAC+TGG	-	chr8_4:9197718-9197737	Msa1312240:CDS	45.0%
!	ATGATATGGCGGAACTGGAA+TGG	-	chr8_4:9197723-9197742	Msa1312240:CDS	45.0%
	GGAATGGCTTTCGAATTTCG+TGG	-	chr8_4:9197739-9197758	Msa1312240:CDS	45.0%
	TTCCGGTGTTTGCGGTTTAA+CGG	+	chr8_4:9197825-9197844	None:intergenic	45.0%
	GATGAAGATTCCGGTGTTTG+CGG	+	chr8_4:9197833-9197852	None:intergenic	45.0%
	TCGGTGGAAGATGAAGATTC+CGG	+	chr8_4:9197842-9197861	None:intergenic	45.0%
!	GGAGAATGAAGGAAGTGTGT+CGG	+	chr8_4:9197861-9197880	None:intergenic	45.0%
!!	TTTCCTGGTAGAGGTGTTTC+TGG	+	chr8_4:9197920-9197939	None:intergenic	45.0%
!	TCCAATTGTGAAGAAGCGTG+AGG	-	chr8_4:9198024-9198043	Msa1312240:CDS	45.0%
	TCCTCACGCTTCTTCACAAT+TGG	+	chr8_4:9198028-9198047	None:intergenic	45.0%
	GATCCGAATGTGGAATGTTC+TGG	-	chr8_4:9198046-9198065	Msa1312240:CDS	45.0%
	GGAAGAAAATGTCTCCACTG+CGG	-	chr8_4:9198067-9198086	Msa1312240:CDS	45.0%
	TGTGGTGTGAGGTTTAAGTC+CGG	-	chr8_4:9198151-9198170	Msa1312240:CDS	45.0%
!	GGCGAGTCCAACTTTTGTAT+CGG	-	chr8_4:9198201-9198220	Msa1312240:intron	45.0%
	TGCTTCGCCGATACAAAAGT+TGG	+	chr8_4:9198211-9198230	None:intergenic	45.0%
	AATTATGGCGAGGGGATAAG+AGG	-	chr8_4:9198628-9198647	Msa1312240:five_prime_UTR	45.0%
	GCACAAGATTACTTTGTCGG+TGG	-	chr8_4:9197301-9197320	Msa1312240:three_prime_UTR	45.0%
	TACTTTGTCGGTGGCTACTA+CGG	-	chr8_4:9197310-9197329	Msa1312240:three_prime_UTR	45.0%
	GAACAATTGTGCCTCCAAAG+CGG	+	chr8_4:9197546-9197565	None:intergenic	45.0%
!	GGAGGCACAATTGTTCCTTA+TGG	-	chr8_4:9197550-9197569	Msa1312240:CDS	45.0%
!	GTATGATGATATGGCGGAAC+TGG	-	chr8_4:9197718-9197737	Msa1312240:CDS	45.0%
!	ATGATATGGCGGAACTGGAA+TGG	-	chr8_4:9197723-9197742	Msa1312240:CDS	45.0%
	GGAATGGCTTTCGAATTTCG+TGG	-	chr8_4:9197739-9197758	Msa1312240:CDS	45.0%
	TTCCGGTGTTTGCGGTTTAA+CGG	+	chr8_4:9197825-9197844	None:intergenic	45.0%
	GATGAAGATTCCGGTGTTTG+CGG	+	chr8_4:9197833-9197852	None:intergenic	45.0%
	TCGGTGGAAGATGAAGATTC+CGG	+	chr8_4:9197842-9197861	None:intergenic	45.0%
!	GGAGAATGAAGGAAGTGTGT+CGG	+	chr8_4:9197861-9197880	None:intergenic	45.0%
!!	TTTCCTGGTAGAGGTGTTTC+TGG	+	chr8_4:9197920-9197939	None:intergenic	45.0%
!	TCCAATTGTGAAGAAGCGTG+AGG	-	chr8_4:9198024-9198043	Msa1312240:CDS	45.0%
	TCCTCACGCTTCTTCACAAT+TGG	+	chr8_4:9198028-9198047	None:intergenic	45.0%
	GATCCGAATGTGGAATGTTC+TGG	-	chr8_4:9198046-9198065	Msa1312240:CDS	45.0%
	GGAAGAAAATGTCTCCACTG+CGG	-	chr8_4:9198067-9198086	Msa1312240:CDS	45.0%
	TGTGGTGTGAGGTTTAAGTC+CGG	-	chr8_4:9198151-9198170	Msa1312240:CDS	45.0%
!	GGCGAGTCCAACTTTTGTAT+CGG	-	chr8_4:9198201-9198220	Msa1312240:intron	45.0%
	TGCTTCGCCGATACAAAAGT+TGG	+	chr8_4:9198211-9198230	None:intergenic	45.0%
	AATTATGGCGAGGGGATAAG+AGG	-	chr8_4:9198628-9198647	Msa1312240:five_prime_UTR	45.0%
!	AAGGCTCACACGGTGGTTTT+TGG	+	chr8_4:9197378-9197397	None:intergenic	50.0%
	TCAATGGCGAAAGGCTCACA+CGG	+	chr8_4:9197388-9197407	None:intergenic	50.0%
!	AGACATAATCGCGTCGGCAT+TGG	+	chr8_4:9197428-9197447	None:intergenic	50.0%
	ACCGTCAGACATAATCGCGT+CGG	+	chr8_4:9197434-9197453	None:intergenic	50.0%
	GGAAGAGTCGGTGGAATTTC+CGG	+	chr8_4:9197476-9197495	None:intergenic	50.0%
	AGCGGTGACATTGGAAGAGT+CGG	+	chr8_4:9197488-9197507	None:intergenic	50.0%
	GGAGTTACAGCTGTCAACAG+CGG	+	chr8_4:9197506-9197525	None:intergenic	50.0%
	GTTGACAGCTGTAACTCCTC+TGG	-	chr8_4:9197508-9197527	Msa1312240:CDS	50.0%
	TCTGGTGATAACCGCTTTGG+AGG	-	chr8_4:9197532-9197551	Msa1312240:CDS	50.0%
	TCCGGTGATGTTCAACTCAC+CGG	-	chr8_4:9197577-9197596	Msa1312240:CDS	50.0%
!	ACCGGTGAGTTGAACATCAC+CGG	+	chr8_4:9197581-9197600	None:intergenic	50.0%
	TACCGGAACACAGAGTTCAC+CGG	+	chr8_4:9197599-9197618	None:intergenic	50.0%
	TGTTTGCGGTTTAACGGCAC+CGG	+	chr8_4:9197819-9197838	None:intergenic	50.0%
	TGCCGTTAAACCGCAAACAC+CGG	-	chr8_4:9197820-9197839	Msa1312240:CDS	50.0%
!	GAATGAAGGAAGTGTGTCGG+TGG	+	chr8_4:9197858-9197877	None:intergenic	50.0%
	GTTTCGTCGGTGGAGAATGA+AGG	+	chr8_4:9197872-9197891	None:intergenic	50.0%
	AGCGTTACGAGCAGTTTCGT+CGG	+	chr8_4:9197885-9197904	None:intergenic	50.0%
!!	CTGGTAGAGGTGTTTCTGGA+CGG	+	chr8_4:9197916-9197935	None:intergenic	50.0%
!	CTACGTGCTTTTCCTGGTAG+AGG	+	chr8_4:9197929-9197948	None:intergenic	50.0%
!!	CGTTTGCTACGTGCTTTTCC+TGG	+	chr8_4:9197935-9197954	None:intergenic	50.0%
	AAAATGTCTCCACTGCGGCA+CGG	-	chr8_4:9198072-9198091	Msa1312240:CDS	50.0%
	ATTGGTCCTGTTCTCCACTG+CGG	+	chr8_4:9198106-9198125	None:intergenic	50.0%
	CAGTGGAGAACAGGACCAAT+GGG	-	chr8_4:9198106-9198125	Msa1312240:CDS	50.0%
	TATGCAATGCGTGTGGTGTG+AGG	-	chr8_4:9198140-9198159	Msa1312240:CDS	50.0%
	GTGTGAGGTTTAAGTCCGGT+AGG	-	chr8_4:9198155-9198174	Msa1312240:CDS	50.0%
	GAGGTTTAAGTCCGGTAGGT+TGG	-	chr8_4:9198159-9198178	Msa1312240:CDS	50.0%
	TTCGGCGTTTCATCTAACGG+TGG	-	chr8_4:9198358-9198377	Msa1312240:CDS	50.0%
!	AAGGCTCACACGGTGGTTTT+TGG	+	chr8_4:9197378-9197397	None:intergenic	50.0%
	TCAATGGCGAAAGGCTCACA+CGG	+	chr8_4:9197388-9197407	None:intergenic	50.0%
!	AGACATAATCGCGTCGGCAT+TGG	+	chr8_4:9197428-9197447	None:intergenic	50.0%
	ACCGTCAGACATAATCGCGT+CGG	+	chr8_4:9197434-9197453	None:intergenic	50.0%
	GGAAGAGTCGGTGGAATTTC+CGG	+	chr8_4:9197476-9197495	None:intergenic	50.0%
	AGCGGTGACATTGGAAGAGT+CGG	+	chr8_4:9197488-9197507	None:intergenic	50.0%
	GGAGTTACAGCTGTCAACAG+CGG	+	chr8_4:9197506-9197525	None:intergenic	50.0%
	GTTGACAGCTGTAACTCCTC+TGG	-	chr8_4:9197508-9197527	Msa1312240:CDS	50.0%
	TCTGGTGATAACCGCTTTGG+AGG	-	chr8_4:9197532-9197551	Msa1312240:CDS	50.0%
	TCCGGTGATGTTCAACTCAC+CGG	-	chr8_4:9197577-9197596	Msa1312240:CDS	50.0%
!	ACCGGTGAGTTGAACATCAC+CGG	+	chr8_4:9197581-9197600	None:intergenic	50.0%
	TACCGGAACACAGAGTTCAC+CGG	+	chr8_4:9197599-9197618	None:intergenic	50.0%
	TGTTTGCGGTTTAACGGCAC+CGG	+	chr8_4:9197819-9197838	None:intergenic	50.0%
	TGCCGTTAAACCGCAAACAC+CGG	-	chr8_4:9197820-9197839	Msa1312240:CDS	50.0%
!	GAATGAAGGAAGTGTGTCGG+TGG	+	chr8_4:9197858-9197877	None:intergenic	50.0%
	GTTTCGTCGGTGGAGAATGA+AGG	+	chr8_4:9197872-9197891	None:intergenic	50.0%
	AGCGTTACGAGCAGTTTCGT+CGG	+	chr8_4:9197885-9197904	None:intergenic	50.0%
!!	CTGGTAGAGGTGTTTCTGGA+CGG	+	chr8_4:9197916-9197935	None:intergenic	50.0%
!	CTACGTGCTTTTCCTGGTAG+AGG	+	chr8_4:9197929-9197948	None:intergenic	50.0%
!!	CGTTTGCTACGTGCTTTTCC+TGG	+	chr8_4:9197935-9197954	None:intergenic	50.0%
	AAAATGTCTCCACTGCGGCA+CGG	-	chr8_4:9198072-9198091	Msa1312240:CDS	50.0%
	ATTGGTCCTGTTCTCCACTG+CGG	+	chr8_4:9198106-9198125	None:intergenic	50.0%
	CAGTGGAGAACAGGACCAAT+GGG	-	chr8_4:9198106-9198125	Msa1312240:CDS	50.0%
	TATGCAATGCGTGTGGTGTG+AGG	-	chr8_4:9198140-9198159	Msa1312240:CDS	50.0%
	GTGTGAGGTTTAAGTCCGGT+AGG	-	chr8_4:9198155-9198174	Msa1312240:CDS	50.0%
	GAGGTTTAAGTCCGGTAGGT+TGG	-	chr8_4:9198159-9198178	Msa1312240:CDS	50.0%
	TTCGGCGTTTCATCTAACGG+TGG	-	chr8_4:9198358-9198377	Msa1312240:CDS	50.0%
!!!	CGGCGAGAATTGGTTTTCGC+CGG	+	chr8_4:9197338-9197357	None:intergenic	55.0%
	CGGCGAAAACCAATTCTCGC+CGG	-	chr8_4:9197336-9197355	Msa1312240:three_prime_UTR	55.0%
	GCCGACGCGATTATGTCTGA+CGG	-	chr8_4:9197430-9197449	Msa1312240:three_prime_UTR	55.0%
	GGTGACATTGGAAGAGTCGG+TGG	+	chr8_4:9197485-9197504	None:intergenic	55.0%
	GCTGTCAACAGCGGTGACAT+TGG	+	chr8_4:9197497-9197516	None:intergenic	55.0%
!	AGCTGTAACTCCTCTGGCTC+TGG	-	chr8_4:9197514-9197533	Msa1312240:CDS	55.0%
!	GGCTCTGGTGATAACCGCTT+TGG	-	chr8_4:9197529-9197548	Msa1312240:CDS	55.0%
	CACCGGTGAACTCTGTGTTC+CGG	-	chr8_4:9197594-9197613	Msa1312240:CDS	55.0%
	GTTACGAGCAGTTTCGTCGG+TGG	+	chr8_4:9197882-9197901	None:intergenic	55.0%
	CGTCCAGAAACACCTCTACC+AGG	-	chr8_4:9197914-9197933	Msa1312240:CDS	55.0%
!	ATAGCTTTTCGGTGGCGCGT+CGG	+	chr8_4:9198005-9198024	None:intergenic	55.0%
	GAAGCGTGAGGATCCGAATG+TGG	-	chr8_4:9198036-9198055	Msa1312240:CDS	55.0%
	GCAGTGGAGAACAGGACCAA+TGG	-	chr8_4:9198105-9198124	Msa1312240:CDS	55.0%
!!	TAAGTCCGGTAGGTTGGTGC+CGG	-	chr8_4:9198165-9198184	Msa1312240:CDS	55.0%
	ATACTCCGGCACCAACCTAC+CGG	+	chr8_4:9198173-9198192	None:intergenic	55.0%
	ACAAAAGTTGGACTCGCCGC+CGG	+	chr8_4:9198199-9198218	None:intergenic	55.0%
!!!	CGGCGAGAATTGGTTTTCGC+CGG	+	chr8_4:9197338-9197357	None:intergenic	55.0%
	CGGCGAAAACCAATTCTCGC+CGG	-	chr8_4:9197336-9197355	Msa1312240:three_prime_UTR	55.0%
	GCCGACGCGATTATGTCTGA+CGG	-	chr8_4:9197430-9197449	Msa1312240:three_prime_UTR	55.0%
	GGTGACATTGGAAGAGTCGG+TGG	+	chr8_4:9197485-9197504	None:intergenic	55.0%
	GCTGTCAACAGCGGTGACAT+TGG	+	chr8_4:9197497-9197516	None:intergenic	55.0%
!	AGCTGTAACTCCTCTGGCTC+TGG	-	chr8_4:9197514-9197533	Msa1312240:CDS	55.0%
!	GGCTCTGGTGATAACCGCTT+TGG	-	chr8_4:9197529-9197548	Msa1312240:CDS	55.0%
	CACCGGTGAACTCTGTGTTC+CGG	-	chr8_4:9197594-9197613	Msa1312240:CDS	55.0%
	GTTACGAGCAGTTTCGTCGG+TGG	+	chr8_4:9197882-9197901	None:intergenic	55.0%
	CGTCCAGAAACACCTCTACC+AGG	-	chr8_4:9197914-9197933	Msa1312240:CDS	55.0%
!	ATAGCTTTTCGGTGGCGCGT+CGG	+	chr8_4:9198005-9198024	None:intergenic	55.0%
	GAAGCGTGAGGATCCGAATG+TGG	-	chr8_4:9198036-9198055	Msa1312240:CDS	55.0%
	GCAGTGGAGAACAGGACCAA+TGG	-	chr8_4:9198105-9198124	Msa1312240:CDS	55.0%
!!	TAAGTCCGGTAGGTTGGTGC+CGG	-	chr8_4:9198165-9198184	Msa1312240:CDS	55.0%
	ATACTCCGGCACCAACCTAC+CGG	+	chr8_4:9198173-9198192	None:intergenic	55.0%
	ACAAAAGTTGGACTCGCCGC+CGG	+	chr8_4:9198199-9198218	None:intergenic	55.0%
	GACGCTTCTCCGGCGAGAAT+TGG	+	chr8_4:9197348-9197367	None:intergenic	60.0%
!!	TTCTCGCCGGAGAAGCGTCA+CGG	-	chr8_4:9197349-9197368	Msa1312240:three_prime_UTR	60.0%
	TGGTCACCGTGACGCTTCTC+CGG	+	chr8_4:9197358-9197377	None:intergenic	60.0%
	ATGGCGAAAGGCTCACACGG+TGG	+	chr8_4:9197385-9197404	None:intergenic	60.0%
	GCGGTTATCACCAGAGCCAG+AGG	+	chr8_4:9197527-9197546	None:intergenic	60.0%
	TTGCAACTTCTCTCCGGCGC+CGG	-	chr8_4:9197797-9197816	Msa1312240:CDS	60.0%
!	TAGCTTTTCGGTGGCGCGTC+GGG	+	chr8_4:9198004-9198023	None:intergenic	60.0%
	AAGACGCCGCAGTGGAGAAC+AGG	-	chr8_4:9198097-9198116	Msa1312240:CDS	60.0%
!!	GTTGGTGCCGGAGTATCGAC+CGG	-	chr8_4:9198177-9198196	Msa1312240:intron	60.0%
	GACGCTTCTCCGGCGAGAAT+TGG	+	chr8_4:9197348-9197367	None:intergenic	60.0%
!!	TTCTCGCCGGAGAAGCGTCA+CGG	-	chr8_4:9197349-9197368	Msa1312240:three_prime_UTR	60.0%
	TGGTCACCGTGACGCTTCTC+CGG	+	chr8_4:9197358-9197377	None:intergenic	60.0%
	ATGGCGAAAGGCTCACACGG+TGG	+	chr8_4:9197385-9197404	None:intergenic	60.0%
	GCGGTTATCACCAGAGCCAG+AGG	+	chr8_4:9197527-9197546	None:intergenic	60.0%
	TTGCAACTTCTCTCCGGCGC+CGG	-	chr8_4:9197797-9197816	Msa1312240:CDS	60.0%
!	TAGCTTTTCGGTGGCGCGTC+GGG	+	chr8_4:9198004-9198023	None:intergenic	60.0%
	AAGACGCCGCAGTGGAGAAC+AGG	-	chr8_4:9198097-9198116	Msa1312240:CDS	60.0%
!!	GTTGGTGCCGGAGTATCGAC+CGG	-	chr8_4:9198177-9198196	Msa1312240:intron	60.0%
	GTCGGTGGCTACTACGGTGC+CGG	-	chr8_4:9197316-9197335	Msa1312240:three_prime_UTR	65.0%
	AAACGCTCACGCGCTGCTCC+AGG	-	chr8_4:9197950-9197969	Msa1312240:CDS	65.0%
	GGGGAGATGTAGTAGGCGCG+TGG	+	chr8_4:9197984-9198003	None:intergenic	65.0%
	GCGCGTCGGGGAGATGTAGT+AGG	+	chr8_4:9197991-9198010	None:intergenic	65.0%
!	AGCTTTTCGGTGGCGCGTCG+GGG	+	chr8_4:9198003-9198022	None:intergenic	65.0%
	GCGTCTTATCCGTGCCGCAG+TGG	+	chr8_4:9198084-9198103	None:intergenic	65.0%
	GCACGGATAAGACGCCGCAG+TGG	-	chr8_4:9198089-9198108	Msa1312240:CDS	65.0%
	GTCGGTGGCTACTACGGTGC+CGG	-	chr8_4:9197316-9197335	Msa1312240:three_prime_UTR	65.0%
	AAACGCTCACGCGCTGCTCC+AGG	-	chr8_4:9197950-9197969	Msa1312240:CDS	65.0%
	GGGGAGATGTAGTAGGCGCG+TGG	+	chr8_4:9197984-9198003	None:intergenic	65.0%
	GCGCGTCGGGGAGATGTAGT+AGG	+	chr8_4:9197991-9198010	None:intergenic	65.0%
!	AGCTTTTCGGTGGCGCGTCG+GGG	+	chr8_4:9198003-9198022	None:intergenic	65.0%
	GCGTCTTATCCGTGCCGCAG+TGG	+	chr8_4:9198084-9198103	None:intergenic	65.0%
	GCACGGATAAGACGCCGCAG+TGG	-	chr8_4:9198089-9198108	Msa1312240:CDS	65.0%
!!	CGGTTTAACGGCACCGGCGC+CGG	+	chr8_4:9197813-9197832	None:intergenic	70.0%
	CACGCGCTGCTCCAGGAGAC+TGG	-	chr8_4:9197957-9197976	Msa1312240:CDS	70.0%
	AGGCGCGTGGACCAGTCTCC+TGG	+	chr8_4:9197971-9197990	None:intergenic	70.0%
!!	GGTGCCGGAGTATCGACCGG+CGG	-	chr8_4:9198180-9198199	Msa1312240:intron	70.0%
	CTCGCCGCCGGTCGATACTC+CGG	+	chr8_4:9198187-9198206	None:intergenic	70.0%
!!	CGGTTTAACGGCACCGGCGC+CGG	+	chr8_4:9197813-9197832	None:intergenic	70.0%
	CACGCGCTGCTCCAGGAGAC+TGG	-	chr8_4:9197957-9197976	Msa1312240:CDS	70.0%
	AGGCGCGTGGACCAGTCTCC+TGG	+	chr8_4:9197971-9197990	None:intergenic	70.0%
!!	GGTGCCGGAGTATCGACCGG+CGG	-	chr8_4:9198180-9198199	Msa1312240:intron	70.0%
	CTCGCCGCCGGTCGATACTC+CGG	+	chr8_4:9198187-9198206	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr8_4	gene	9197204	9198704	9197204	ID=Msa1312240;Name=Msa1312240
chr8_4	mRNA	9197204	9198704	9197204	ID=Msa1312240-mRNA-1;Parent=Msa1312240;Name=Msa1312240-mRNA-1;_AED=0.00;_eAED=0.00;_QI=91\|1\|1\|1\|1\|1\|2\|266\|346
chr8_4	exon	9197204	9198189	9197204	ID=Msa1312240-mRNA-1:exon:3414;Parent=Msa1312240-mRNA-1
chr8_4	exon	9198293	9198704	9198293	ID=Msa1312240-mRNA-1:exon:3413;Parent=Msa1312240-mRNA-1
chr8_4	five_prime_UTR	9198614	9198704	9198614	ID=Msa1312240-mRNA-1:five_prime_utr;Parent=Msa1312240-mRNA-1
chr8_4	CDS	9198293	9198613	9198293	ID=Msa1312240-mRNA-1:cds;Parent=Msa1312240-mRNA-1
chr8_4	CDS	9197470	9198189	9197470	ID=Msa1312240-mRNA-1:cds;Parent=Msa1312240-mRNA-1
chr8_4	three_prime_UTR	9197204	9197469	9197204	ID=Msa1312240-mRNA-1:three_prime_utr;Parent=Msa1312240-mRNA-1

Gene Sequence

>Msa1312240

ATGGAAGCACAAGATTACTTTGTCGGTGGCTACTACGGTGCCGGCGAAAACCAATTCTCGCCGGAGAAGCGTCACGGTGACCAAAAACCACCGTGTGAGCCTTTCGCCATTGATGATTTACTTGATTTCTCCAATGCCGACGCGATTATGTCTGACGGTTTCTTCGATAACAATGTCGCCGGAAATTCCACCGACTCTTCCAATGTCACCGCTGTTGACAGCTGTAACTCCTCTGGCTCTGGTGATAACCGCTTTGGAGGCACAATTGTTCCTTATGGTTTTTCCGGTGATGTTCAACTCACCGGTGAACTCTGTGTTCCGTATGATGATATGGCGGAACTGGAATGGCTTTCGAATTTCGTGGAAGATTCATACTCCGCTGAAGAAGAATTGAAAACATTGCAACTTCTCTCCGGCGCCGGTGCCGTTAAACCGCAAACACCGGAATCTTCATCTTCCACCGACACACTTCCTTCATTCTCCACCGACGAAACTGCTCGTAACGCTTCATTTCTCCGTCCAGAAACACCTCTACCAGGAAAAGCACGTAGCAAACGCTCACGCGCTGCTCCAGGAGACTGGTCCACGCGCCTACTACATCTCCCCGACGCGCCACCGAAAAGCTATCCAATTGTGAAGAAGCGTGAGGATCCGAATGTGGAATGTTCTGGAAGAAAATGTCTCCACTGCGGCACGGATAAGACGCCGCAGTGGAGAACAGGACCAATGGGACCAAAAACACTATGCAATGCGTGTGGTGTGAGGTTTAAGTCCGGTAGGTTGGTGCCGGAGTATCGACCGGCGGCGAGTCCAACTTTTGTATCGGCGAAGCATTCGAATTCTCATAGGAAAGTTTTGGAACTTCGAAGACAGAAAGAGATGCAAAGATCATCACAGCATCATCATCATCATCATCATCATCATCATCATCAACAACAGCTTCTGAGTCACAGTTCAATTTTCGGCGTTTCATCTAACGGTGGAGATGATTTCATCAATTATCATCATCATTGTGGGCCAGAGTTTAGACATGTTATCTAG

Protein sequence

>Msa1312240

MEAQDYFVGGYYGAGENQFSPEKRHGDQKPPCEPFAIDDLLDFSNADAIMSDGFFDNNVAGNSTDSSNVTAVDSCNSSGSGDNRFGGTIVPYGFSGDVQLTGELCVPYDDMAELEWLSNFVEDSYSAEEELKTLQLLSGAGAVKPQTPESSSSTDTLPSFSTDETARNASFLRPETPLPGKARSKRSRAAPGDWSTRLLHLPDAPPKSYPIVKKREDPNVECSGRKCLHCGTDKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFVSAKHSNSHRKVLELRRQKEMQRSSQHHHHHHHHHHHQQQLLSHSSIFGVSSNGGDDFINYHHHCGPEFRHVI*