AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1060300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1060300 MtrunA17_Chr7g0237761 97.973 444 9 0 1 444 1 444 0.0 909
Msa1060300 MtrunA17_Chr1g0169731 75.561 446 102 3 6 444 5 450 0.0 685
Msa1060300 MtrunA17_Chr4g0058051 71.728 382 107 1 64 444 26 407 0.0 580
Msa1060300 MtrunA17_Chr6g0458201 65.803 386 132 0 59 444 19 404 0.0 563
Msa1060300 MtrunA17_Chr3g0116521 70.466 386 114 0 59 444 21 406 0.0 556
Msa1060300 MtrunA17_Chr3g0123321 69.171 386 116 2 59 444 21 403 0.0 531
Msa1060300 MtrunA17_Chr3g0123331 63.377 385 138 3 62 444 23 406 6.50e-177 501
Msa1060300 MtrunA17_Chr1g0210321 62.466 373 137 1 67 436 35 407 9.16e-177 503
Msa1060300 MtrunA17_Chr1g0180381 60.471 382 144 1 66 440 34 415 4.90e-175 498
Msa1060300 MtrunA17_Chr7g0264891 63.564 376 136 1 66 440 35 410 4.17e-174 496
Msa1060300 MtrunA17_Chr4g0060211 55.440 386 163 4 66 444 51 434 4.49e-157 451
Msa1060300 MtrunA17_Chr5g0416061 58.873 355 145 1 91 444 95 449 3.80e-148 429
Msa1060300 MtrunA17_Chr8g0362561 55.801 362 152 2 91 444 94 455 2.48e-145 422
Msa1060300 MtrunA17_Chr2g0288921 56.000 350 150 3 96 444 63 409 8.15e-143 414
Msa1060300 MtrunA17_Chr5g0416041 50.224 446 211 3 10 444 4 449 1.28e-142 415
Msa1060300 MtrunA17_Chr4g0075231 57.429 350 145 3 96 444 39 385 2.88e-142 412
Msa1060300 MtrunA17_Chr6g0452861 56.780 354 152 1 92 444 100 453 1.34e-141 412
Msa1060300 MtrunA17_Chr7g0216581 48.690 458 197 6 9 444 10 451 3.45e-138 404
Msa1060300 MtrunA17_Chr8g0373761 45.070 355 185 7 96 444 42 392 2.54e-100 305
Msa1060300 MtrunA17_Chr8g0373721 44.507 355 187 7 96 444 42 392 2.99e-100 305
Msa1060300 MtrunA17_Chr3g0089181 44.507 355 187 7 96 444 23 373 1.36e-99 302
Msa1060300 MtrunA17_Chr8g0373701 43.662 355 190 7 96 444 97 447 3.74e-96 296
Msa1060300 MtrunA17_Chr8g0373731 45.352 355 184 7 96 444 42 392 4.51e-94 289
Msa1060300 MtrunA17_Chr5g0403481 45.070 355 185 7 96 444 41 391 1.18e-89 277
Msa1060300 MtrunA17_Chr5g0403461 45.070 355 185 7 96 444 41 391 1.18e-89 277
Msa1060300 MtrunA17_Chr5g0403491 45.070 355 185 7 96 444 41 391 1.18e-89 277
Msa1060300 MtrunA17_Chr4g0031851 45.062 324 170 6 121 440 14 333 6.80e-89 275
Msa1060300 MtrunA17_Chr5g0403391 43.662 355 190 7 96 444 41 391 1.08e-87 272
Msa1060300 MtrunA17_Chr5g0414541 42.697 356 192 8 96 444 41 391 1.09e-86 270
Msa1060300 MtrunA17_Chr5g0403411 44.225 355 188 7 96 444 41 391 2.78e-86 269
Msa1060300 MtrunA17_Chr1g0183941 44.981 269 144 3 171 437 1 267 6.58e-75 235
Msa1060300 MtrunA17_Chr3g0113551 71.429 126 36 0 241 366 161 286 4.52e-61 201
Msa1060300 MtrunA17_Chr6g0481851 39.636 275 108 6 129 401 6 224 6.86e-53 177
Msa1060300 MtrunA17_Chr2g0288901 50.641 156 72 3 290 444 5 156 5.12e-46 156
Msa1060300 MtrunA17_Chr2g0288911 58.197 122 50 1 171 291 1 122 3.59e-41 142
Msa1060300 MtrunA17_Chr1g0212931 36.806 288 156 7 113 399 13 275 1.63e-39 144
Msa1060300 MtrunA17_Chr1g0182021 35.540 287 161 4 113 399 62 324 4.18e-37 139
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1060300 AT4G13710.1 75.231 432 97 4 23 444 39 470 0.0 682
Msa1060300 AT4G13710.2 76.123 423 91 4 32 444 29 451 0.0 677
Msa1060300 AT3G24670.1 76.376 436 98 2 11 444 8 440 0.0 668
Msa1060300 AT3G07010.1 81.378 392 73 0 53 444 25 416 0.0 665
Msa1060300 AT1G04680.1 80.977 389 70 1 60 444 41 429 0.0 660
Msa1060300 AT4G13210.2 74.424 434 102 2 12 444 13 438 0.0 641
Msa1060300 AT5G48900.1 81.538 390 72 0 55 444 28 417 0.0 636
Msa1060300 AT3G07010.2 82.880 368 63 0 77 444 16 383 0.0 636
Msa1060300 AT4G13210.1 79.695 394 79 1 52 444 8 401 0.0 630
Msa1060300 AT3G24230.1 65.632 451 141 6 6 444 3 451 0.0 594
Msa1060300 AT1G67750.1 71.916 381 105 1 64 444 30 408 0.0 572
Msa1060300 AT5G63180.1 68.421 399 116 2 48 444 42 432 0.0 570
Msa1060300 AT4G24780.2 71.728 382 107 1 64 444 27 408 0.0 559
Msa1060300 AT4G24780.1 71.728 382 107 1 64 444 27 408 0.0 559
Msa1060300 AT3G27400.2 66.404 381 127 1 64 444 37 416 0.0 531
Msa1060300 AT3G27400.1 66.404 381 127 1 64 444 33 412 0.0 530
Msa1060300 AT3G53190.1 58.042 429 146 4 8 436 20 414 1.69e-172 493
Msa1060300 AT5G04310.3 57.561 410 158 2 42 435 25 434 3.14e-170 486
Msa1060300 AT5G04310.1 57.561 410 158 2 42 435 25 434 7.32e-169 484
Msa1060300 AT5G04310.2 57.561 410 158 2 42 435 25 434 7.32e-169 484
Msa1060300 AT3G54920.1 57.360 394 144 4 62 440 32 416 4.56e-163 469
Msa1060300 AT5G55720.1 55.875 383 157 5 63 444 21 392 2.30e-154 443
Msa1060300 AT1G11920.1 59.714 350 138 3 96 444 37 384 5.53e-154 442
Msa1060300 AT3G01270.1 53.301 409 181 3 46 444 67 475 3.53e-152 441
Msa1060300 AT1G14420.1 55.556 360 154 1 91 444 100 459 3.22e-149 432
Msa1060300 AT5G15110.1 57.465 355 149 2 92 444 118 472 1.44e-148 431
Msa1060300 AT4G22090.1 56.857 350 147 3 96 444 47 393 5.15e-147 424
Msa1060300 AT4G22080.1 56.857 350 147 3 96 444 47 393 1.14e-146 424
Msa1060300 AT2G02720.1 46.916 454 222 5 6 444 6 455 8.85e-142 413
Msa1060300 AT1G30350.1 53.009 349 148 3 96 444 36 368 9.71e-129 377
Msa1060300 AT5G09280.1 48.387 248 125 3 129 375 6 251 3.51e-78 245
Msa1060300 AT3G09540.1 38.408 289 150 7 113 399 61 323 2.37e-42 154
Msa1060300 AT3G55140.1 37.884 293 146 9 113 399 14 276 5.31e-42 152
Msa1060300 AT3G09540.3 38.062 289 147 8 113 399 61 319 9.68e-40 147
Msa1060300 AT3G55140.2 36.719 256 131 7 150 399 22 252 5.47e-35 132
Msa1060300 AT3G09540.2 36.992 246 129 5 113 357 61 281 7.72e-35 131

Find 180 sgRNAs with CRISPR-Local

Find 497 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCATTGCATACAACCATTT+TGG 0.110425 7_2:+48123470 Msa1060300:CDS
TCTTGTCAACAGTTAGATTT+TGG 0.119998 7_2:+48124500 Msa1060300:three_prime_UTR
CGTAGCTCCCCTTCCCATTT+TGG 0.137331 7_2:+48123069 Msa1060300:CDS
ATGAGAACTGTTGTTGTTAT+TGG 0.149715 7_2:+48124542 Msa1060300:three_prime_UTR
TCATGATCAGTTCTTGCTTC+AGG 0.227766 7_2:-48122906 None:intergenic
TCTTTGGTTCCAGTCATATT+TGG 0.228663 7_2:+48123127 Msa1060300:CDS
TGGTCTTGTTGATGCTATTA+TGG 0.249104 7_2:+48123182 Msa1060300:CDS
TTGCATTGTTATAGTAGATT+TGG 0.253485 7_2:+48124422 Msa1060300:three_prime_UTR
CCATTGTCCTCCATCCAAAA+TGG 0.255429 7_2:-48123083 None:intergenic
TAGAAGCCATCTCTCACTTT+TGG 0.262555 7_2:+48124584 Msa1060300:three_prime_UTR
GTTCTTTCCCTTTACTCATT+TGG 0.263710 7_2:-48124295 None:intergenic
GGTGATGGCATTTCCATCTT+TGG 0.269913 7_2:+48123111 Msa1060300:CDS
TATGCTAGAGCCTCAAGTTT+AGG 0.285322 7_2:+48124174 Msa1060300:CDS
TCCCTATTGCCCATTTCATT+TGG 0.293764 7_2:-48124780 None:intergenic
TGGATACAGGGTCCGGAGTA+TGG 0.302482 7_2:+48124067 Msa1060300:CDS
TTCACGGGGTCGTCGTCTCT+TGG 0.302742 7_2:-48122802 None:intergenic
AATGATACAGGTTATGCTAT+TGG 0.304610 7_2:+48123406 Msa1060300:intron
GCTGATTGTGCCATTGGTTT+TGG 0.316248 7_2:+48122730 Msa1060300:CDS
CACAATCAGCCAACCGCTTT+CGG 0.318646 7_2:-48122717 None:intergenic
AGAAGAAGATGAGAAGAAAA+TGG 0.320484 7_2:-48117639 None:intergenic
CTAGTTACCTTGGCATCCTT+TGG 0.320663 7_2:-48123505 None:intergenic
TTGATTTGTCCCAAATGAAA+TGG 0.332307 7_2:+48124770 Msa1060300:three_prime_UTR
TCATTCAAGATAGGCCATTA+TGG 0.332717 7_2:+48122854 Msa1060300:CDS
CCCTATTGCCCATTTCATTT+GGG 0.336426 7_2:-48124779 None:intergenic
TCGGCTTACAATCATGGATA+TGG 0.339277 7_2:-48123029 None:intergenic
ATGCTAGAGCCTCAAGTTTA+GGG 0.340135 7_2:+48124175 Msa1060300:CDS
TTGTAAGAATGTTACCTCTT+TGG 0.340895 7_2:-48123945 None:intergenic
GGATAAGACCCTCCCCAAAA+TGG 0.344066 7_2:-48123484 None:intergenic
CATGATCAGTTCTTGCTTCA+GGG 0.349577 7_2:-48122905 None:intergenic
GCCAATGTTCATATTGCCTT+TGG 0.350632 7_2:+48122958 Msa1060300:CDS
TGACGGAGAGTGCCAGGTCT+TGG 0.363455 7_2:-48122826 None:intergenic
TGAATCCCTTGGAAAATTAG+AGG 0.369319 7_2:-48124634 None:intergenic
TCCGACTAAAGAAGATGATT+TGG 0.375192 7_2:-48124199 None:intergenic
ATTGGCACCACGACCATCTA+TGG 0.380940 7_2:-48122941 None:intergenic
AATGTTACCTCTTTGGCAAA+AGG 0.387769 7_2:-48123938 None:intergenic
ATGATACAGGTTATGCTATT+GGG 0.392819 7_2:+48123407 Msa1060300:intron
CCCAAATGAAATGGGCAATA+GGG 0.394384 7_2:+48124779 Msa1060300:three_prime_UTR
GACGGAGAGTGCCAGGTCTT+GGG 0.410130 7_2:-48122825 None:intergenic
TCCCAAATGAAATGGGCAAT+AGG 0.414633 7_2:+48124778 Msa1060300:three_prime_UTR
GGTCTTGTTGATGCTATTAT+GGG 0.421679 7_2:+48123183 Msa1060300:CDS
TCACGGGGTCGTCGTCTCTT+GGG 0.425792 7_2:-48122801 None:intergenic
TTGCCTTGGCTGTTAATTGT+GGG 0.427394 7_2:-48123893 None:intergenic
TCCCAGTCGGCTTACAATCA+TGG 0.429765 7_2:-48123035 None:intergenic
ATAGAAAGACAAAGAAACTA+AGG 0.430405 7_2:-48124678 None:intergenic
GAGTATGGAAGGGTTGGAAT+TGG 0.435726 7_2:+48124082 Msa1060300:CDS
TCAACAACCAAATGAGTAAA+GGG 0.435964 7_2:+48124288 Msa1060300:three_prime_UTR
GGAGAGAAAGAAAAGCATAA+AGG 0.436299 7_2:+48124358 Msa1060300:three_prime_UTR
AGTGCCAGGTCTTGGGTTCA+CGG 0.439411 7_2:-48122818 None:intergenic
CACTGGGTGATGTATGCTAT+TGG 0.442502 7_2:+48123857 Msa1060300:CDS
GTTGCCTTGGCTGTTAATTG+TGG 0.451055 7_2:-48123894 None:intergenic
TATAACAATGCAATAATAAG+AGG 0.451336 7_2:-48124412 None:intergenic
CTCAATTTACCTCGTTGTGG+TGG 0.451940 7_2:-48123242 None:intergenic
TATGGAAGGGTTGGAATTGG+AGG 0.453341 7_2:+48124085 Msa1060300:CDS
GTGCCAGGTCTTGGGTTCAC+GGG 0.453527 7_2:-48122817 None:intergenic
GTGACAAAGAGGGTGGATAC+AGG 0.460057 7_2:+48124054 Msa1060300:CDS
CTCTTGAAAACGATCCATAA+TGG 0.461059 7_2:-48122868 None:intergenic
TGATTTGTCCCAAATGAAAT+GGG 0.461984 7_2:+48124771 Msa1060300:three_prime_UTR
ATGTTACCTCTTTGGCAAAA+GGG 0.462229 7_2:-48123937 None:intergenic
GAAAGAAAAGCATAAAGGAA+TGG 0.470361 7_2:+48124363 Msa1060300:three_prime_UTR
ATCAACAACCAAATGAGTAA+AGG 0.470711 7_2:+48124287 Msa1060300:three_prime_UTR
AATATGACTGGAACCAAAGA+TGG 0.477110 7_2:-48123124 None:intergenic
GTGGTGGGTGAAGTAGTTAT+TGG 0.479572 7_2:-48123226 None:intergenic
GCTGGCGCTGTGACAAGCTT+TGG 0.480343 7_2:+48122686 Msa1060300:CDS
GGTTGGAATTGGAGGTCTGA+GGG 0.482075 7_2:+48124093 Msa1060300:CDS
CTGGTGTTATTAAATGTCGC+CGG 0.482263 7_2:+48124238 Msa1060300:CDS
ACCATGGAAGCAATCTCCTC+TGG 0.483733 7_2:-48118404 None:intergenic
TGGTGTTGCGTGTGAGAGAA+AGG 0.484455 7_2:-48117663 None:intergenic
CGGTTGGCTGATTGTGCCAT+TGG 0.488142 7_2:+48122724 Msa1060300:CDS
ATCCATGATTGTAAGCCGAC+TGG 0.492456 7_2:+48123033 Msa1060300:CDS
GCCGCAGCTCCTCTTCCTGA+TGG 0.492712 7_2:-48124147 None:intergenic
CAGCGCCAGCAGTCATCCAT+TGG 0.493207 7_2:-48122673 None:intergenic
CATTGTCCTCCATCCAAAAT+GGG 0.494585 7_2:-48123082 None:intergenic
ACGGCATGACGGAGAGTGCC+AGG 0.495476 7_2:-48122832 None:intergenic
TCTCTGTCTAATTGCGCTGA+TGG 0.499109 7_2:+48123162 Msa1060300:CDS
TTAGTCGGAACTTTAACTGC+AGG 0.500265 7_2:+48124213 Msa1060300:CDS
TGGTGTTATTAAATGTCGCC+GGG 0.500739 7_2:+48124239 Msa1060300:CDS
GTAGTTATTGGAAACGGTAA+TGG 0.501809 7_2:-48123214 None:intergenic
TTTGGTCGCAACGCCATTGG+TGG 0.502455 7_2:+48122748 Msa1060300:CDS
TCCAGAGGAGATTGCTTCCA+TGG 0.502756 7_2:+48118403 Msa1060300:CDS
TACAGGGTCCGGAGTATGGA+AGG 0.503644 7_2:+48124071 Msa1060300:CDS
GTGAAGCAACAATGGAGTTA+CGG 0.503946 7_2:+48117712 Msa1060300:exon
GAATGTATTGATCAAATAGT+TGG 0.508802 7_2:+48124801 Msa1060300:three_prime_UTR
AAGAAGCGTGATAGCGAGAA+TGG 0.510985 7_2:-48117757 None:intergenic
CCCAAAATGGTTGTATGCAA+TGG 0.513203 7_2:-48123471 None:intergenic
GGGCAAGGTATCTGTTGCCT+TGG 0.513269 7_2:-48123907 None:intergenic
GAAATCCAATGGATGACTGC+TGG 0.513725 7_2:+48122668 Msa1060300:CDS
CCTTCCGTCGCGGCCACCAA+TGG 0.515437 7_2:-48122761 None:intergenic
TTGTTATAGTAGATTTGGAT+TGG 0.515669 7_2:+48124427 Msa1060300:three_prime_UTR
ATTGGAAACGGTAATGGCGG+TGG 0.517945 7_2:-48123208 None:intergenic
GAATCCCTTGGAAAATTAGA+GGG 0.523122 7_2:-48124633 None:intergenic
CATGATGATAGTGTTGTGAA+TGG 0.528531 7_2:+48117957 Msa1060300:intron
GTGGTCAATCCAAATATGAC+TGG 0.530763 7_2:-48123136 None:intergenic
CTTTGGCAAAAGGGTTCTGA+GGG 0.532600 7_2:-48123928 None:intergenic
GTCATGCCGTCATTCAAGAT+AGG 0.533236 7_2:+48122845 Msa1060300:CDS
GCCAAATCATCTTCTTTAGT+CGG 0.537093 7_2:+48124198 Msa1060300:CDS
AATAGTAATGCATGCTCCAA+AGG 0.544329 7_2:-48122974 None:intergenic
TCTTTGGCAAAAGGGTTCTG+AGG 0.544752 7_2:-48123929 None:intergenic
TCCATGATTGTAAGCCGACT+GGG 0.546175 7_2:+48123034 Msa1060300:CDS
AACGCCATTGGTGGCCGCGA+CGG 0.547516 7_2:+48122757 Msa1060300:CDS
GAGCTTGAATAATTCATCAA+TGG 0.547562 7_2:+48118001 Msa1060300:CDS
CCATTGGTGGCCGCGACGGA+AGG 0.548347 7_2:+48122761 Msa1060300:CDS
AAGAGGGTGGATACAGGGTC+CGG 0.551709 7_2:+48124060 Msa1060300:CDS
GTCGTTATGATCAATAGCAT+TGG 0.551956 7_2:-48117790 None:intergenic
TCAATTTACCTCGTTGTGGT+GGG 0.552926 7_2:-48123241 None:intergenic
TTGGGGAGGGTCTTATCCAA+AGG 0.555778 7_2:+48123489 Msa1060300:CDS
TCCTCCATCCAAAATGGGAA+GGG 0.556374 7_2:-48123077 None:intergenic
TAGAAAGACAAAGAAACTAA+GGG 0.556379 7_2:-48124677 None:intergenic
AGACAAAGAAACTAAGGGGA+AGG 0.557948 7_2:-48124672 None:intergenic
AAAACAGAGTGAAGCAACAA+TGG 0.561784 7_2:+48117704 Msa1060300:exon
GGTCCGGAGTATGGAAGGGT+TGG 0.562652 7_2:+48124076 Msa1060300:CDS
ATCACCAATGTCATCATCCA+TGG 0.564338 7_2:+48123003 Msa1060300:CDS
GTCTTATCCAAAGGATGCCA+AGG 0.567344 7_2:+48123498 Msa1060300:CDS
CTATTGATCATAACGACTCA+AGG 0.567769 7_2:+48117796 Msa1060300:CDS
GGTGAAGTAGTTATTGGAAA+CGG 0.568326 7_2:-48123220 None:intergenic
GGAACTTTAACTGCAGGTGC+TGG 0.568678 7_2:+48124219 Msa1060300:CDS
GACCCCGTGAACCCAAGACC+TGG 0.571184 7_2:+48122814 Msa1060300:CDS
GTCCTCCATCCAAAATGGGA+AGG 0.575724 7_2:-48123078 None:intergenic
GTACAGACGCCGAAAGCGGT+TGG 0.577446 7_2:+48122708 Msa1060300:CDS
TGTATTAACACATGCCACCC+CGG 0.580417 7_2:-48124257 None:intergenic
TACGCAATCACACGGAGAGA+AGG 0.580498 7_2:+48122617 Msa1060300:CDS
AGAGGGGTACACTATTCCAC+AGG 0.581096 7_2:-48124712 None:intergenic
TGCCAGGTCTTGGGTTCACG+GGG 0.582221 7_2:-48122816 None:intergenic
TGACAAAGAGGGTGGATACA+GGG 0.585715 7_2:+48124055 Msa1060300:CDS
GGGTTGGAATTGGAGGTCTG+AGG 0.587913 7_2:+48124092 Msa1060300:CDS
CCTCCATCCAAAATGGGAAG+GGG 0.592528 7_2:-48123076 None:intergenic
TTTAAGACCATAGATGGTCG+TGG 0.594416 7_2:+48122934 Msa1060300:CDS
TAAACAATGACTATACACAC+TGG 0.595352 7_2:+48123840 Msa1060300:CDS
TAATCTCCAAAAGTGAGAGA+TGG 0.597530 7_2:-48124590 None:intergenic
ATAATTCATCAATGGCGGAA+AGG 0.597934 7_2:+48118009 Msa1060300:CDS
TAATGGCCTATCTTGAATGA+CGG 0.601803 7_2:-48122851 None:intergenic
AGTCTCAATTTACCTCGTTG+TGG 0.602217 7_2:-48123245 None:intergenic
ATGTGGGACTGGAAATCCAA+TGG 0.603052 7_2:+48122657 Msa1060300:CDS
CAAAAGGGTTCTGAGGGGCA+AGG 0.604683 7_2:-48123922 None:intergenic
AATCATGGATATGGACACCA+TGG 0.604716 7_2:-48123020 None:intergenic
GACAAAGAAACTAAGGGGAA+GGG 0.605532 7_2:-48124671 None:intergenic
TCCAAAGGCAATATGAACAT+TGG 0.605546 7_2:-48122959 None:intergenic
TGATTTGGCCCCTAAACTTG+AGG 0.605907 7_2:-48124184 None:intergenic
GGCGTTGCGACCAAAACCAA+TGG 0.608647 7_2:-48122740 None:intergenic
ATTCCAACCCTTCCATACTC+CGG 0.611120 7_2:-48124079 None:intergenic
CTTGAATAATTCATCAATGG+CGG 0.613119 7_2:+48118004 Msa1060300:CDS
GTTATTAAATGTCGCCGGGG+TGG 0.616534 7_2:+48124243 Msa1060300:CDS
AGGACAATGGCTGATGGTGA+TGG 0.620179 7_2:+48123096 Msa1060300:CDS
TAAGCCGACTGGGAATGCTA+TGG 0.626089 7_2:+48123044 Msa1060300:CDS
CGCAATTAGACAGAGAGTTG+TGG 0.627312 7_2:-48123155 None:intergenic
TCCATCAGGAAGAGGAGCTG+CGG 0.628803 7_2:+48124146 Msa1060300:CDS
TGGGTGATGTATGCTATTGG+AGG 0.631164 7_2:+48123860 Msa1060300:CDS
CAGGACTATACGCAATCACA+CGG 0.632843 7_2:+48122609 Msa1060300:intron
TATCTTGAATGACGGCATGA+CGG 0.641019 7_2:-48122843 None:intergenic
GGATGGAGGACAATGGCTGA+TGG 0.643191 7_2:+48123090 Msa1060300:CDS
AAACAATGACTATACACACT+GGG 0.644998 7_2:+48123841 Msa1060300:CDS
TTTGGTACAGACGCCGAAAG+CGG 0.645650 7_2:+48122704 Msa1060300:CDS
TGCTAGAGCCTCAAGTTTAG+GGG 0.654577 7_2:+48124176 Msa1060300:CDS
ACAGGGTCCGGAGTATGGAA+GGG 0.658271 7_2:+48124072 Msa1060300:CDS
GAATTATTACGTATCAACCA+TGG 0.659930 7_2:-48118420 None:intergenic
TGGACAGGTGACAAAGAGGG+TGG 0.664985 7_2:+48124047 Msa1060300:intron
GAACCCACAATTAACAGCCA+AGG 0.665968 7_2:+48123890 Msa1060300:CDS
GAATATTGCAGATGTAGACA+CGG 0.668694 7_2:+48123803 Msa1060300:intron
ACTGTTGACAAGATAAACAG+TGG 0.669346 7_2:-48124490 None:intergenic
AGAAAGACAAAGAAACTAAG+GGG 0.669765 7_2:-48124676 None:intergenic
GTTATTGGAAACGGTAATGG+CGG 0.672422 7_2:-48123211 None:intergenic
GGTACACTATTCCACAGGGG+AGG 0.673688 7_2:-48124707 None:intergenic
GGCACACATACACAATCGAG+AGG 0.676491 7_2:-48124730 None:intergenic
GACACCATGGATGATGACAT+TGG 0.680615 7_2:-48123007 None:intergenic
GCACACATACACAATCGAGA+GGG 0.683744 7_2:-48124729 None:intergenic
AATATTGCAGATGTAGACAC+GGG 0.684120 7_2:+48123804 Msa1060300:intron
GAGGGGTACACTATTCCACA+GGG 0.684890 7_2:-48124711 None:intergenic
TCTATATGTATCCTCCCCTG+TGG 0.690350 7_2:+48124696 Msa1060300:three_prime_UTR
CTGTTGACAAGATAAACAGT+GGG 0.691709 7_2:-48124489 None:intergenic
ATGTGGACAGGTGACAAAGA+GGG 0.696684 7_2:+48124044 Msa1060300:intron
CACACATACACAATCGAGAG+GGG 0.700555 7_2:-48124728 None:intergenic
CGAACCATAGCATTCCCAGT+CGG 0.703490 7_2:-48123048 None:intergenic
GCATGCAGTTGATAATCCAG+AGG 0.706876 7_2:+48118388 Msa1060300:CDS
GATGTGGACAGGTGACAAAG+AGG 0.712511 7_2:+48124043 Msa1060300:intron
CAACGTAGTACCTTCCGTCG+CGG 0.714601 7_2:-48122771 None:intergenic
TATAGTCATTGTTTACCACG+TGG 0.716427 7_2:-48123832 None:intergenic
TTTGGCAAAAGGGTTCTGAG+GGG 0.747633 7_2:-48123927 None:intergenic
GGTGTTATTAAATGTCGCCG+GGG 0.749848 7_2:+48124240 Msa1060300:CDS
CTACTTCACCCACCACAACG+AGG 0.767107 7_2:+48123233 Msa1060300:CDS
TAGACACGGGTATTTCCACG+TGG 0.797672 7_2:+48123817 Msa1060300:CDS
AGGGGTACACTATTCCACAG+GGG 0.822508 7_2:-48124710 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAAATAATTAAATTAA+AGG - chr7_2:48118456-48118475 None:intergenic 0.0%
!!! ATAATTATATATATTTTTTA+AGG - chr7_2:48120860-48120879 None:intergenic 0.0%
!!! ATATATATAATTATTTTTTA+AGG + chr7_2:48120866-48120885 Msa1060300:intron 0.0%
!!! TATATATAATTATTTTTTAA+GGG + chr7_2:48120867-48120886 Msa1060300:intron 0.0%
!!! TATTTTGTAATGATTAAAAT+CGG + chr7_2:48118094-48118113 Msa1060300:intron 10.0%
!! ATAAATAATTAAATTAAAGG+AGG - chr7_2:48118453-48118472 None:intergenic 10.0%
!! TTATAATTAATGACATTTAT+AGG + chr7_2:48119336-48119355 Msa1060300:intron 10.0%
!! TCATATTAAAAAATTAGAAA+AGG - chr7_2:48120158-48120177 None:intergenic 10.0%
!!! CCAATTTTTTAAAAAAAATT+CGG - chr7_2:48120513-48120532 None:intergenic 10.0%
!!! CCAATTTTTTTAAAAAATTT+CGG - chr7_2:48120615-48120634 None:intergenic 10.0%
!!! AAAAAATTCGAATTTTTTTA+AGG + chr7_2:48120759-48120778 Msa1060300:intron 10.0%
!! ATTATTATATTTCCTAAAAA+AGG + chr7_2:48120815-48120834 Msa1060300:intron 10.0%
!!! AATATTTAAATACCTTTTTT+AGG - chr7_2:48120830-48120849 None:intergenic 10.0%
!!! GTATAATTATTATGTTTTTA+AGG + chr7_2:48120896-48120915 Msa1060300:intron 10.0%
!! ATTATTATATTTCCTAAAAA+AGG + chr7_2:48120815-48120834 Msa1060300:intron 10.0%
!!! AATATTTAATTACCTTTTTT+AGG - chr7_2:48120981-48121000 None:intergenic 10.0%
!! TTAAAAATTGAAAAAAATTC+TGG + chr7_2:48121119-48121138 Msa1060300:intron 10.0%
!!! CGAAATTTTTTTAAAAAAAT+TGG - chr7_2:48120746-48120765 None:intergenic 10.0%
!!! TCCAATTTTTTTAAAAAATT+CGG + chr7_2:48121353-48121372 Msa1060300:intron 10.0%
!! ACAAATAAAAAAAATTGAGT+TGG + chr7_2:48118621-48118640 Msa1060300:intron 15.0%
!!! ACCATAATTTTCTTTATTTT+CGG - chr7_2:48119035-48119054 None:intergenic 15.0%
!! TATTAATTATATAAAACCAG+AGG - chr7_2:48119628-48119647 None:intergenic 15.0%
!! ATCTAAATCTATCAATAAAA+AGG - chr7_2:48119964-48119983 None:intergenic 15.0%
!!! CCGAATTTTTTTTAAAAAAT+TGG + chr7_2:48120510-48120529 Msa1060300:intron 15.0%
!! TAAAAATGAAAACAAAAATC+TGG + chr7_2:48120542-48120561 Msa1060300:intron 15.0%
!!! CCGAAATTTTTTAAAAAAAT+TGG + chr7_2:48120612-48120631 Msa1060300:intron 15.0%
!!! TTTTTTTAAGGATGTTTTTA+AGG + chr7_2:48120771-48120790 Msa1060300:intron 15.0%
!!! TTTTTTAAGGATGTTTTTAA+GGG + chr7_2:48120772-48120791 Msa1060300:intron 15.0%
!!! TTTTTAAGGGAATTTTTTTA+AGG + chr7_2:48120910-48120929 Msa1060300:intron 15.0%
!!! TTTTAAGGGAATTTTTTTAA+GGG + chr7_2:48120911-48120930 Msa1060300:intron 15.0%
!!! CCGAATTTTTTTTAAAATTT+CGG - chr7_2:48121152-48121171 None:intergenic 15.0%
!!! CCGAAATTTTAAAAAAAATT+CGG + chr7_2:48121149-48121168 Msa1060300:intron 15.0%
!! TAAAAATGAAAACAAAAATC+TGG - chr7_2:48120542-48120561 None:intergenic 15.0%
!!! ACCGAATTTTTTAAAAAAAT+TGG - chr7_2:48121357-48121376 None:intergenic 15.0%
!!! TAACTTCTAAAATTTTTAGT+AGG + chr7_2:48121818-48121837 Msa1060300:intron 15.0%
!! AATATATCAAGAAAATGTTA+TGG - chr7_2:48122048-48122067 None:intergenic 15.0%
!!! AACATTTTCTTGATATATTT+TGG + chr7_2:48122049-48122068 Msa1060300:intron 15.0%
!!! AGTATAACTTCTAAAATTAT+TGG + chr7_2:48122490-48122509 Msa1060300:intron 15.0%
!!! ATACTTGTTAAATTTTAAAC+AGG + chr7_2:48122590-48122609 Msa1060300:intron 15.0%
!!! TATTTTTTTTTCCTTTTTGA+AGG + chr7_2:48123546-48123565 Msa1060300:intron 15.0%
!!! TTTAGTACTAGTATTTATTT+TGG + chr7_2:48123579-48123598 Msa1060300:intron 15.0%
!!! TTAGTACTAGTATTTATTTT+GGG + chr7_2:48123580-48123599 Msa1060300:intron 15.0%
!! TGATAAACTTTACTAAATAT+TGG + chr7_2:48124013-48124032 Msa1060300:intron 15.0%
!! GAATTAAAAAAGAAAAGAAA+AGG + chr7_2:48124337-48124356 Msa1060300:three_prime_UTR 15.0%
!!! ATTGAGTTGGATTATTTTTT+TGG + chr7_2:48118634-48118653 Msa1060300:intron 20.0%
!!! GTAAACAAGTTTTAAATAGT+AGG + chr7_2:48118851-48118870 Msa1060300:intron 20.0%
!! GATTCACAACAAATTATAAA+TGG - chr7_2:48118980-48118999 None:intergenic 20.0%
!! TAATATATCATTCCAAAAAG+AGG - chr7_2:48119002-48119021 None:intergenic 20.0%
!!! ATTTTCTTTATTTTCGGAAA+TGG - chr7_2:48119029-48119048 None:intergenic 20.0%
!! TCCGAAAATAAAGAAAATTA+TGG + chr7_2:48119031-48119050 Msa1060300:intron 20.0%
!!! CTTTTTCATCAAAATTAATC+AGG - chr7_2:48119120-48119139 None:intergenic 20.0%
!!! TGGTGATATTTATTTTGAAA+AGG - chr7_2:48119368-48119387 None:intergenic 20.0%
!! TTTCAAAATAAATATCACCA+TGG + chr7_2:48119368-48119387 Msa1060300:intron 20.0%
!! AATATAAAGGTCATCAAATA+GGG - chr7_2:48119521-48119540 None:intergenic 20.0%
!!! AAAAGCATCAAAGAATATAA+AGG - chr7_2:48119534-48119553 None:intergenic 20.0%
!! AATGACTCTAGTAAAATAAA+AGG - chr7_2:48119579-48119598 None:intergenic 20.0%
!! TAAATTTATTATGACCGAAA+TGG - chr7_2:48119811-48119830 None:intergenic 20.0%
!!! GTAAAAACAATTTTCAGATA+AGG - chr7_2:48119855-48119874 None:intergenic 20.0%
!! AAATAAAATCTGGAAAATTC+TGG + chr7_2:48120582-48120601 Msa1060300:intron 20.0%
!!! TTTTTTTAAGGGTGTTTTTA+AGG + chr7_2:48120922-48120941 Msa1060300:intron 20.0%
!!! TTTTTTAAGGGTGTTTTTAA+GGG + chr7_2:48120923-48120942 Msa1060300:intron 20.0%
!!! TTTTTAGTTATAAATGTGTC+TGG - chr7_2:48121059-48121078 None:intergenic 20.0%
!! TAGAGAAAATTGAAATATGA+TGG + chr7_2:48122228-48122247 Msa1060300:intron 20.0%
!!! TTTTCTATTCAATTCAACAT+TGG - chr7_2:48122571-48122590 None:intergenic 20.0%
!! TAAAAAGGTAGTATTAGAAA+AGG - chr7_2:48123321-48123340 None:intergenic 20.0%
!! ATAAATACTAGTACTAAAAC+TGG - chr7_2:48123577-48123596 None:intergenic 20.0%
!! AAATATTGGAAAATTTGATG+TGG + chr7_2:48124027-48124046 Msa1060300:intron 20.0%
!! TATAACAATGCAATAATAAG+AGG - chr7_2:48124415-48124434 None:intergenic 20.0%
!!! AAAATAAATTTTGAATCCCT+TGG - chr7_2:48124648-48124667 None:intergenic 20.0%
!!! TCAAGTGTTTTCTAAATAAA+TGG - chr7_2:48124754-48124773 None:intergenic 20.0%
! TTGTAGTAAAACAGAATCAA+CGG - chr7_2:48118254-48118273 None:intergenic 25.0%
! TCGTTTAGTGATGATTTAAA+CGG + chr7_2:48118301-48118320 Msa1060300:intron 25.0%
!!! TTAAGCTGCATATTTTTATC+CGG + chr7_2:48118528-48118547 Msa1060300:intron 25.0%
! ACAATTAGATGTGCTTAATA+TGG + chr7_2:48118906-48118925 Msa1060300:intron 25.0%
! AAAGAAAATTATGGTGAAAG+TGG + chr7_2:48119040-48119059 Msa1060300:intron 25.0%
!!! AATTTTGATGAAAAAGTGAG+TGG + chr7_2:48119124-48119143 Msa1060300:intron 25.0%
!!! ATTTTGATGAAAAAGTGAGT+GGG + chr7_2:48119125-48119144 Msa1060300:intron 25.0%
!! TATCAAGGATGCATAAATTT+TGG - chr7_2:48119277-48119296 None:intergenic 25.0%
! TAAATATCACCATGGAAAAA+CGG + chr7_2:48119376-48119395 Msa1060300:intron 25.0%
! GAATATAAAGGTCATCAAAT+AGG - chr7_2:48119522-48119541 None:intergenic 25.0%
! AGAATAATTTAATTCTCCTC+TGG + chr7_2:48119609-48119628 Msa1060300:intron 25.0%
! ACTCAATCTAAGCTTAATTA+TGG + chr7_2:48120190-48120209 Msa1060300:intron 25.0%
!! CTAATTCTAAAAACATCATG+AGG - chr7_2:48120270-48120289 None:intergenic 25.0%
!!! CTCATGATGTTTTTAGAATT+AGG + chr7_2:48120268-48120287 Msa1060300:intron 25.0%
! AAATAATAGAATTACACACG+TGG - chr7_2:48121412-48121431 None:intergenic 25.0%
! AAATAATAGAATTACACACG+TGG + chr7_2:48121412-48121431 Msa1060300:intron 25.0%
! AGGTATAAAAAGACAAACAA+GGG - chr7_2:48121620-48121639 None:intergenic 25.0%
! GTCTAATCAGAAATTTATGT+GGG - chr7_2:48121643-48121662 None:intergenic 25.0%
! AGTCTAATCAGAAATTTATG+TGG - chr7_2:48121644-48121663 None:intergenic 25.0%
!! GAAGAGTGATTTACTAATTT+TGG - chr7_2:48121732-48121751 None:intergenic 25.0%
!!! TTTTCTTGATATATTTTGGC+TGG + chr7_2:48122053-48122072 Msa1060300:intron 25.0%
! GTCATTTAATAAGTTCATAG+GGG - chr7_2:48122111-48122130 None:intergenic 25.0%
! GGTCATTTAATAAGTTCATA+GGG - chr7_2:48122112-48122131 None:intergenic 25.0%
! TGGTCATTTAATAAGTTCAT+AGG - chr7_2:48122113-48122132 None:intergenic 25.0%
! TTATTAAATGACCAAGATTC+AGG + chr7_2:48122119-48122138 Msa1060300:intron 25.0%
! ATTATTAACTTCCTGAATCT+TGG - chr7_2:48122133-48122152 None:intergenic 25.0%
! TACAATAAATGCTAAGTTAG+GGG - chr7_2:48122207-48122226 None:intergenic 25.0%
! CTACAATAAATGCTAAGTTA+GGG - chr7_2:48122208-48122227 None:intergenic 25.0%
! ACTACAATAAATGCTAAGTT+AGG - chr7_2:48122209-48122228 None:intergenic 25.0%
! TTATTATTGATGTCTGATGA+GGG - chr7_2:48122344-48122363 None:intergenic 25.0%
! ATTATTATTGATGTCTGATG+AGG - chr7_2:48122345-48122364 None:intergenic 25.0%
! TTTAGAAGTTATACTGCTAA+GGG - chr7_2:48122485-48122504 None:intergenic 25.0%
!!! TTTTAGAAGTTATACTGCTA+AGG - chr7_2:48122486-48122505 None:intergenic 25.0%
! TTACTTAAGATAATGAAGGA+GGG - chr7_2:48123273-48123292 None:intergenic 25.0%
!! GTTGTTACTTAAGATAATGA+AGG - chr7_2:48123277-48123296 None:intergenic 25.0%
! AATTGAGTACAAAATGATAC+AGG + chr7_2:48123394-48123413 Msa1060300:intron 25.0%
! ATGAGAAGTCTACTAAAATT+GGG + chr7_2:48123638-48123657 Msa1060300:intron 25.0%
! AGAAATAGACAGAGAATTTA+TGG - chr7_2:48123760-48123779 None:intergenic 25.0%
! TTCTTAGCTAATGAAATATG+TGG + chr7_2:48123976-48123995 Msa1060300:intron 25.0%
!!! TTCTTTTTTTCAGTTTGCTT+GGG - chr7_2:48124320-48124339 None:intergenic 25.0%
!!! ATTCTTTTTTTCAGTTTGCT+TGG - chr7_2:48124321-48124340 None:intergenic 25.0%
! TTGCATTGTTATAGTAGATT+TGG + chr7_2:48124422-48124441 Msa1060300:three_prime_UTR 25.0%
! TTGTTATAGTAGATTTGGAT+TGG + chr7_2:48124427-48124446 Msa1060300:three_prime_UTR 25.0%
! TAGAAAGACAAAGAAACTAA+GGG - chr7_2:48124680-48124699 None:intergenic 25.0%
! ATAGAAAGACAAAGAAACTA+AGG - chr7_2:48124681-48124700 None:intergenic 25.0%
!! GAATGTATTGATCAAATAGT+TGG + chr7_2:48124801-48124820 Msa1060300:three_prime_UTR 25.0%
! TTCTTTCGTTTTCTCTGTTT+TGG - chr7_2:48117686-48117705 None:intergenic 30.0%
GAGCTTGAATAATTCATCAA+TGG + chr7_2:48118001-48118020 Msa1060300:CDS 30.0%
CTTGAATAATTCATCAATGG+CGG + chr7_2:48118004-48118023 Msa1060300:CDS 30.0%
! ATAAAGGTGTAGATAACTGT+TGG + chr7_2:48118131-48118150 Msa1060300:intron 30.0%
! TGCATTTTCAGCTTAAGTAA+TGG + chr7_2:48118353-48118372 Msa1060300:intron 30.0%
GAATTATTACGTATCAACCA+TGG - chr7_2:48118423-48118442 None:intergenic 30.0%
! TTTTTATCCGGATTTGAATC+TGG + chr7_2:48118540-48118559 Msa1060300:intron 30.0%
CATTTAATTGATCATGTGCA+TGG + chr7_2:48118697-48118716 Msa1060300:intron 30.0%
! GTATTTTCTTCCTCTGTTTT+TGG + chr7_2:48118734-48118753 Msa1060300:intron 30.0%
AATACAAACTAAAGCCAAGT+GGG - chr7_2:48118827-48118846 None:intergenic 30.0%
AAATACAAACTAAAGCCAAG+TGG - chr7_2:48118828-48118847 None:intergenic 30.0%
!! TTTGTTGTGAATCCTCTTTT+TGG + chr7_2:48118987-48119006 Msa1060300:intron 30.0%
CTATACTACTCGTACTAATA+TGG - chr7_2:48119214-48119233 None:intergenic 30.0%
ATTTATGCATCCTTGATACA+AGG + chr7_2:48119279-48119298 Msa1060300:intron 30.0%
ACGATTTCTAACTTTCTTGA+CGG - chr7_2:48119404-48119423 None:intergenic 30.0%
AGCTGGCAAATAAAATATTC+TGG - chr7_2:48119759-48119778 None:intergenic 30.0%
TTTATTATGACCGAAATGGT+CGG - chr7_2:48119807-48119826 None:intergenic 30.0%
! AGTCATGAAGATTGGATTTT+AGG - chr7_2:48119905-48119924 None:intergenic 30.0%
CCACTATACAAGAAATGAAA+GGG - chr7_2:48120018-48120037 None:intergenic 30.0%
ACCACTATACAAGAAATGAA+AGG - chr7_2:48120019-48120038 None:intergenic 30.0%
AAGCTTAGATTGAGTAGAAA+GGG - chr7_2:48120185-48120204 None:intergenic 30.0%
TAAGCTTAGATTGAGTAGAA+AGG - chr7_2:48120186-48120205 None:intergenic 30.0%
ATCTAAGCTTAATTATGGCT+AGG + chr7_2:48120195-48120214 Msa1060300:intron 30.0%
TCTAAGCTTAATTATGGCTA+GGG + chr7_2:48120196-48120215 Msa1060300:intron 30.0%
GGATAACTAGCATAATTCTA+AGG - chr7_2:48121599-48121618 None:intergenic 30.0%
GAGGTATAAAAAGACAAACA+AGG - chr7_2:48121621-48121640 None:intergenic 30.0%
TAATCAGAAATTTATGTGGG+AGG - chr7_2:48121640-48121659 None:intergenic 30.0%
CATAAATCTTACACGTTACA+GGG + chr7_2:48121686-48121705 Msa1060300:intron 30.0%
!! AAACTACAAAGGTATTCATG+TGG - chr7_2:48121986-48122005 None:intergenic 30.0%
ATAGAATGATACGGTGTATA+CGG - chr7_2:48122275-48122294 None:intergenic 30.0%
!! ATTCAGTCCTTTAAGACAAA+CGG + chr7_2:48122418-48122437 Msa1060300:intron 30.0%
AAATTACCCGTTTGTCTTAA+AGG - chr7_2:48122428-48122447 None:intergenic 30.0%
!!! AACAGTTTTAAGACCATAGA+TGG + chr7_2:48122928-48122947 Msa1060300:CDS 30.0%
GTTACTTAAGATAATGAAGG+AGG - chr7_2:48123274-48123293 None:intergenic 30.0%
AATGATACAGGTTATGCTAT+TGG + chr7_2:48123406-48123425 Msa1060300:intron 30.0%
ATGATACAGGTTATGCTATT+GGG + chr7_2:48123407-48123426 Msa1060300:intron 30.0%
CATGAGAAGTCTACTAAAAT+TGG + chr7_2:48123637-48123656 Msa1060300:intron 30.0%
! TCTATTTCTTGCACTAACAA+TGG + chr7_2:48123771-48123790 Msa1060300:intron 30.0%
TAAACAATGACTATACACAC+TGG + chr7_2:48123840-48123859 Msa1060300:CDS 30.0%
AAACAATGACTATACACACT+GGG + chr7_2:48123841-48123860 Msa1060300:CDS 30.0%
TTGTAAGAATGTTACCTCTT+TGG - chr7_2:48123948-48123967 None:intergenic 30.0%
AAAAAGCTCCATTTAGCAAA+AGG - chr7_2:48124122-48124141 None:intergenic 30.0%
ATCAACAACCAAATGAGTAA+AGG + chr7_2:48124287-48124306 Msa1060300:three_prime_UTR 30.0%
TCAACAACCAAATGAGTAAA+GGG + chr7_2:48124288-48124307 Msa1060300:three_prime_UTR 30.0%
! GAAAGAAAAGCATAAAGGAA+TGG + chr7_2:48124363-48124382 Msa1060300:three_prime_UTR 30.0%
! TCTTGTCAACAGTTAGATTT+TGG + chr7_2:48124500-48124519 Msa1060300:three_prime_UTR 30.0%
! CTTGTCAACAGTTAGATTTT+GGG + chr7_2:48124501-48124520 Msa1060300:three_prime_UTR 30.0%
! ATGAGAACTGTTGTTGTTAT+TGG + chr7_2:48124542-48124561 Msa1060300:three_prime_UTR 30.0%
! ATTTCCCTCTAATTTTCCAA+GGG + chr7_2:48124629-48124648 Msa1060300:three_prime_UTR 30.0%
AGAAAGACAAAGAAACTAAG+GGG - chr7_2:48124679-48124698 None:intergenic 30.0%
!! TTGATTTGTCCCAAATGAAA+TGG + chr7_2:48124770-48124789 Msa1060300:three_prime_UTR 30.0%
! TGATTTGTCCCAAATGAAAT+GGG + chr7_2:48124771-48124790 Msa1060300:three_prime_UTR 30.0%
AAAACAGAGTGAAGCAACAA+TGG + chr7_2:48117704-48117723 Msa1060300:exon 35.0%
GTCGTTATGATCAATAGCAT+TGG - chr7_2:48117793-48117812 None:intergenic 35.0%
CTATTGATCATAACGACTCA+AGG + chr7_2:48117796-48117815 Msa1060300:CDS 35.0%
! CATGATGATAGTGTTGTGAA+TGG + chr7_2:48117957-48117976 Msa1060300:intron 35.0%
! ATAATTCATCAATGGCGGAA+AGG + chr7_2:48118009-48118028 Msa1060300:CDS 35.0%
TCGACATTGTCTGATGAAAT+AGG - chr7_2:48118503-48118522 None:intergenic 35.0%
TAACGTTCCAGATTCAAATC+CGG - chr7_2:48118550-48118569 None:intergenic 35.0%
TTCTCAAAAGCCAAAAACAG+AGG - chr7_2:48118747-48118766 None:intergenic 35.0%
!!! TGTTTTTGGCTTTTGAGAAG+AGG + chr7_2:48118748-48118767 Msa1060300:intron 35.0%
ATTAATCAGGCAGACACAAA+AGG - chr7_2:48119107-48119126 None:intergenic 35.0%
CATATCTGATCCTTGTATCA+AGG - chr7_2:48119292-48119311 None:intergenic 35.0%
AAATCGTGTGAGTAATTGCA+TGG + chr7_2:48119417-48119436 Msa1060300:intron 35.0%
AATCGTGTGAGTAATTGCAT+GGG + chr7_2:48119418-48119437 Msa1060300:intron 35.0%
TACTGCAGTGTGGTAATAAA+TGG - chr7_2:48119453-48119472 None:intergenic 35.0%
AAAAAAATGCTACTGCAGTG+TGG - chr7_2:48119463-48119482 None:intergenic 35.0%
! GATTGATTCATTAAGCACCA+TGG - chr7_2:48119697-48119716 None:intergenic 35.0%
GTGATTGAAGTCATGAAGAT+TGG - chr7_2:48119913-48119932 None:intergenic 35.0%
CCCTTTCATTTCTTGTATAG+TGG + chr7_2:48120015-48120034 Msa1060300:intron 35.0%
TACTTTCTCCTATGTTTCTC+TGG + chr7_2:48120080-48120099 Msa1060300:intron 35.0%
TTCGTAAACCAGAGAAACAT+AGG - chr7_2:48120091-48120110 None:intergenic 35.0%
CTAAGCTTAATTATGGCTAG+GGG + chr7_2:48120197-48120216 Msa1060300:intron 35.0%
CACAATTGGCAAAATATAGG+GGG - chr7_2:48121557-48121576 None:intergenic 35.0%
GCACAATTGGCAAAATATAG+GGG - chr7_2:48121556-48121575 None:intergenic 35.0%
CGCACAATTGGCAAAATATA+GGG - chr7_2:48121555-48121574 None:intergenic 35.0%
TCGCACAATTGGCAAAATAT+AGG - chr7_2:48121554-48121573 None:intergenic 35.0%
! TTTTGCCAATTGTGCGATTT+TGG + chr7_2:48120316-48120335 Msa1060300:intron 35.0%
AATCGCTCGTTTCAAACTAT+GGG - chr7_2:48121523-48121542 None:intergenic 35.0%
AAATCGCTCGTTTCAAACTA+TGG - chr7_2:48121522-48121541 None:intergenic 35.0%
!! TAGTTTGAAACGAGCGATTT+TGG + chr7_2:48120345-48120364 Msa1060300:intron 35.0%
! TTTCCCCCTTTCTGATTTTA+TGG + chr7_2:48120378-48120397 Msa1060300:intron 35.0%
! TTTCCCCCTTTCTGATTTTA+TGG - chr7_2:48120378-48120397 None:intergenic 35.0%
!! TAGTTTGAAACGAGCGATTT+TGG - chr7_2:48120345-48120364 None:intergenic 35.0%
AAATCGCTCGTTTCAAACTA+TGG + chr7_2:48121522-48121541 Msa1060300:intron 35.0%
AATCGCTCGTTTCAAACTAT+GGG + chr7_2:48121523-48121542 Msa1060300:intron 35.0%
! TTTTGCCAATTGTGCGATTT+TGG - chr7_2:48120316-48120335 None:intergenic 35.0%
TCGCACAATTGGCAAAATAT+AGG + chr7_2:48121554-48121573 Msa1060300:intron 35.0%
CGCACAATTGGCAAAATATA+GGG + chr7_2:48121555-48121574 Msa1060300:intron 35.0%
GCACAATTGGCAAAATATAG+GGG + chr7_2:48121556-48121575 Msa1060300:intron 35.0%
CACAATTGGCAAAATATAGG+GGG + chr7_2:48121557-48121576 Msa1060300:intron 35.0%
CCTGTAACGTGTAAGATTTA+TGG - chr7_2:48121688-48121707 None:intergenic 35.0%
CCATAAATCTTACACGTTAC+AGG + chr7_2:48121685-48121704 Msa1060300:intron 35.0%
ATCACTCTTCAGTAGTCAAA+AGG + chr7_2:48121742-48121761 Msa1060300:intron 35.0%
TCACTCTTCAGTAGTCAAAA+GGG + chr7_2:48121743-48121762 Msa1060300:intron 35.0%
! TTGTGTGTTACTGATTACCT+TGG + chr7_2:48121853-48121872 Msa1060300:intron 35.0%
! TGTGTGTTACTGATTACCTT+GGG + chr7_2:48121854-48121873 Msa1060300:intron 35.0%
!!! ACTCTGTTTTTGGTTCTTTC+AGG - chr7_2:48121895-48121914 None:intergenic 35.0%
! GGGTTTATGAACTCTGTTTT+TGG - chr7_2:48121905-48121924 None:intergenic 35.0%
GTTCATAAACCCAGACTATT+AGG + chr7_2:48121913-48121932 Msa1060300:intron 35.0%
GCATGAATTCCTAATAGTCT+GGG - chr7_2:48121925-48121944 None:intergenic 35.0%
TGCATGAATTCCTAATAGTC+TGG - chr7_2:48121926-48121945 None:intergenic 35.0%
AGGATACGGATAGAATGATA+CGG - chr7_2:48122284-48122303 None:intergenic 35.0%
TGGGTCAACAATTAAGGATA+CGG - chr7_2:48122298-48122317 None:intergenic 35.0%
!! TTCAGTCCTTTAAGACAAAC+GGG + chr7_2:48122419-48122438 Msa1060300:intron 35.0%
!!! GTCTGAGTTTTTTCTCATGT+GGG + chr7_2:48122641-48122660 Msa1060300:CDS 35.0%
TAATGGCCTATCTTGAATGA+CGG - chr7_2:48122854-48122873 None:intergenic 35.0%
TCATTCAAGATAGGCCATTA+TGG + chr7_2:48122854-48122873 Msa1060300:CDS 35.0%
CTCTTGAAAACGATCCATAA+TGG - chr7_2:48122871-48122890 None:intergenic 35.0%
TCCAAAGGCAATATGAACAT+TGG - chr7_2:48122962-48122981 None:intergenic 35.0%
AATAGTAATGCATGCTCCAA+AGG - chr7_2:48122977-48122996 None:intergenic 35.0%
AATATGACTGGAACCAAAGA+TGG - chr7_2:48123127-48123146 None:intergenic 35.0%
! TCTTTGGTTCCAGTCATATT+TGG + chr7_2:48123127-48123146 Msa1060300:CDS 35.0%
!! TGGTCTTGTTGATGCTATTA+TGG + chr7_2:48123182-48123201 Msa1060300:CDS 35.0%
!! GGTCTTGTTGATGCTATTAT+GGG + chr7_2:48123183-48123202 Msa1060300:CDS 35.0%
GTAGTTATTGGAAACGGTAA+TGG - chr7_2:48123217-48123236 None:intergenic 35.0%
GGTGAAGTAGTTATTGGAAA+CGG - chr7_2:48123223-48123242 None:intergenic 35.0%
! ACCATTGCATACAACCATTT+TGG + chr7_2:48123470-48123489 Msa1060300:CDS 35.0%
! CCATTGCATACAACCATTTT+GGG + chr7_2:48123471-48123490 Msa1060300:CDS 35.0%
! CATTGCATACAACCATTTTG+GGG + chr7_2:48123472-48123491 Msa1060300:CDS 35.0%
AATGTTACTGCTAGTTACCT+TGG - chr7_2:48123518-48123537 None:intergenic 35.0%
ACTTCTCATGTCAAATAGAG+AGG - chr7_2:48123627-48123646 None:intergenic 35.0%
ATGACAACTAGACCTCTTTA+TGG + chr7_2:48123666-48123685 Msa1060300:intron 35.0%
! AACACTCTTTAGAAGAACAG+AGG - chr7_2:48123723-48123742 None:intergenic 35.0%
GAATATTGCAGATGTAGACA+CGG + chr7_2:48123803-48123822 Msa1060300:intron 35.0%
AATATTGCAGATGTAGACAC+GGG + chr7_2:48123804-48123823 Msa1060300:intron 35.0%
TATAGTCATTGTTTACCACG+TGG - chr7_2:48123835-48123854 None:intergenic 35.0%
ATGTTACCTCTTTGGCAAAA+GGG - chr7_2:48123940-48123959 None:intergenic 35.0%
AATGTTACCTCTTTGGCAAA+AGG - chr7_2:48123941-48123960 None:intergenic 35.0%
TTGGAAAATTTGATGTGGAC+AGG + chr7_2:48124032-48124051 Msa1060300:intron 35.0%
GCCAAATCATCTTCTTTAGT+CGG + chr7_2:48124198-48124217 Msa1060300:CDS 35.0%
TCCGACTAAAGAAGATGATT+TGG - chr7_2:48124202-48124221 None:intergenic 35.0%
GTTCTTTCCCTTTACTCATT+TGG - chr7_2:48124298-48124317 None:intergenic 35.0%
! GGAGAGAAAGAAAAGCATAA+AGG + chr7_2:48124358-48124377 Msa1060300:three_prime_UTR 35.0%
CTGTTGACAAGATAAACAGT+GGG - chr7_2:48124492-48124511 None:intergenic 35.0%
ACTGTTGACAAGATAAACAG+TGG - chr7_2:48124493-48124512 None:intergenic 35.0%
TAATCTCCAAAAGTGAGAGA+TGG - chr7_2:48124593-48124612 None:intergenic 35.0%
!! CTCTCACTTTTGGAGATTAT+TGG + chr7_2:48124594-48124613 Msa1060300:three_prime_UTR 35.0%
! GATTTCCCTCTAATTTTCCA+AGG + chr7_2:48124628-48124647 Msa1060300:three_prime_UTR 35.0%
GAATCCCTTGGAAAATTAGA+GGG - chr7_2:48124636-48124655 None:intergenic 35.0%
TGAATCCCTTGGAAAATTAG+AGG - chr7_2:48124637-48124656 None:intergenic 35.0%
GTGAAGCAACAATGGAGTTA+CGG + chr7_2:48117712-48117731 Msa1060300:exon 40.0%
GCAAACAGTACTATTTGCGT+CGG + chr7_2:48118203-48118222 Msa1060300:intron 40.0%
GCTTAATATGGTCCCATTAG+CGG + chr7_2:48118918-48118937 Msa1060300:intron 40.0%
ATCACAATGCAACCGCTAAT+GGG - chr7_2:48118933-48118952 None:intergenic 40.0%
GCAGTGTGGTAATAAATGGT+GGG - chr7_2:48119449-48119468 None:intergenic 40.0%
TGCAGTGTGGTAATAAATGG+TGG - chr7_2:48119450-48119469 None:intergenic 40.0%
GATTCATTAAGCACCATGGA+AGG - chr7_2:48119693-48119712 None:intergenic 40.0%
ATCGCCATGTTCTTTGCATA+TGG + chr7_2:48119714-48119733 Msa1060300:intron 40.0%
TCGCCATGTTCTTTGCATAT+GGG + chr7_2:48119715-48119734 Msa1060300:intron 40.0%
GATCCCATATGCAAAGAACA+TGG - chr7_2:48119721-48119740 None:intergenic 40.0%
ACATTAGCATGTGGTTAAGC+TGG - chr7_2:48119776-48119795 None:intergenic 40.0%
GATCTCAGAACATTAGCATG+TGG - chr7_2:48119785-48119804 None:intergenic 40.0%
CCAAGACATGTGTTTAACAG+GGG - chr7_2:48120042-48120061 None:intergenic 40.0%
GCCAAGACATGTGTTTAACA+GGG - chr7_2:48120043-48120062 None:intergenic 40.0%
CTGTTAAACACATGTCTTGG+CGG + chr7_2:48120042-48120061 Msa1060300:intron 40.0%
ATCGCTCGTTTCAAACTATG+GGG - chr7_2:48121524-48121543 None:intergenic 40.0%
GGACCATAAAATCAGAAAGG+GGG - chr7_2:48121483-48121502 None:intergenic 40.0%
GGGACCATAAAATCAGAAAG+GGG - chr7_2:48121482-48121501 None:intergenic 40.0%
GGGGACCATAAAATCAGAAA+GGG - chr7_2:48121481-48121500 None:intergenic 40.0%
TGGGGACCATAAAATCAGAA+AGG - chr7_2:48121480-48121499 None:intergenic 40.0%
TTTATGGTCCCCATGACATT+TGG + chr7_2:48120394-48120413 Msa1060300:intron 40.0%
ACATCAGCACCAAATGTCAT+GGG - chr7_2:48121461-48121480 None:intergenic 40.0%
ACATCAGCACCAAATGTCAT+GGG + chr7_2:48121461-48121480 Msa1060300:intron 40.0%
TTTATGGTCCCCATGACATT+TGG - chr7_2:48120394-48120413 None:intergenic 40.0%
TGGGGACCATAAAATCAGAA+AGG + chr7_2:48121480-48121499 Msa1060300:intron 40.0%
GGGGACCATAAAATCAGAAA+GGG + chr7_2:48121481-48121500 Msa1060300:intron 40.0%
GGGACCATAAAATCAGAAAG+GGG + chr7_2:48121482-48121501 Msa1060300:intron 40.0%
GGACCATAAAATCAGAAAGG+GGG + chr7_2:48121483-48121502 Msa1060300:intron 40.0%
ATCAGAAAGGGGGAAAACTA+TGG + chr7_2:48121493-48121512 Msa1060300:intron 40.0%
TCAGAAAGGGGGAAAACTAT+GGG + chr7_2:48121494-48121513 Msa1060300:intron 40.0%
ATCGCTCGTTTCAAACTATG+GGG + chr7_2:48121524-48121543 Msa1060300:intron 40.0%
GTAAGTGATCAAGAAACCCA+AGG - chr7_2:48121873-48121892 None:intergenic 40.0%
ACAGGCTGTAGAAACTACAA+AGG - chr7_2:48121997-48122016 None:intergenic 40.0%
!!! TTAGGGGAGATCTAGTTTTG+GGG - chr7_2:48122191-48122210 None:intergenic 40.0%
!!! GTTAGGGGAGATCTAGTTTT+GGG - chr7_2:48122192-48122211 None:intergenic 40.0%
!! AGTTAGGGGAGATCTAGTTT+TGG - chr7_2:48122193-48122212 None:intergenic 40.0%
GTCATGTGGGTCAACAATTA+AGG - chr7_2:48122304-48122323 None:intergenic 40.0%
!!! AGTTTTTTCTCATGTGGGAC+TGG + chr7_2:48122646-48122665 Msa1060300:CDS 40.0%
TATCTTGAATGACGGCATGA+CGG - chr7_2:48122846-48122865 None:intergenic 40.0%
!! GATCGTTTTCAAGAGAGACA+TGG + chr7_2:48122876-48122895 Msa1060300:CDS 40.0%
CATGATCAGTTCTTGCTTCA+GGG - chr7_2:48122908-48122927 None:intergenic 40.0%
TCATGATCAGTTCTTGCTTC+AGG - chr7_2:48122909-48122928 None:intergenic 40.0%
! TTTAAGACCATAGATGGTCG+TGG + chr7_2:48122934-48122953 Msa1060300:CDS 40.0%
GCCAATGTTCATATTGCCTT+TGG + chr7_2:48122958-48122977 Msa1060300:CDS 40.0%
ATCACCAATGTCATCATCCA+TGG + chr7_2:48123003-48123022 Msa1060300:CDS 40.0%
AATCATGGATATGGACACCA+TGG - chr7_2:48123023-48123042 None:intergenic 40.0%
TCGGCTTACAATCATGGATA+TGG - chr7_2:48123032-48123051 None:intergenic 40.0%
CATTGTCCTCCATCCAAAAT+GGG - chr7_2:48123085-48123104 None:intergenic 40.0%
GTGGTCAATCCAAATATGAC+TGG - chr7_2:48123139-48123158 None:intergenic 40.0%
! GTTATTGGAAACGGTAATGG+CGG - chr7_2:48123214-48123233 None:intergenic 40.0%
TCAATTTACCTCGTTGTGGT+GGG - chr7_2:48123244-48123263 None:intergenic 40.0%
AGTCTCAATTTACCTCGTTG+TGG - chr7_2:48123248-48123267 None:intergenic 40.0%
CCCAAAATGGTTGTATGCAA+TGG - chr7_2:48123474-48123493 None:intergenic 40.0%
AGTTGGAATGGACCATAAAG+AGG - chr7_2:48123681-48123700 None:intergenic 40.0%
TTGCCTTGGCTGTTAATTGT+GGG - chr7_2:48123896-48123915 None:intergenic 40.0%
! TTTTTCACTCCATCAGGAAG+AGG + chr7_2:48124138-48124157 Msa1060300:CDS 40.0%
TATGCTAGAGCCTCAAGTTT+AGG + chr7_2:48124174-48124193 Msa1060300:CDS 40.0%
ATGCTAGAGCCTCAAGTTTA+GGG + chr7_2:48124175-48124194 Msa1060300:CDS 40.0%
TTAGTCGGAACTTTAACTGC+AGG + chr7_2:48124213-48124232 Msa1060300:CDS 40.0%
!! CTGGTGTTATTAAATGTCGC+CGG + chr7_2:48124238-48124257 Msa1060300:CDS 40.0%
!! TGGTGTTATTAAATGTCGCC+GGG + chr7_2:48124239-48124258 Msa1060300:CDS 40.0%
! TAGAAGCCATCTCTCACTTT+TGG + chr7_2:48124584-48124603 Msa1060300:three_prime_UTR 40.0%
GACAAAGAAACTAAGGGGAA+GGG - chr7_2:48124674-48124693 None:intergenic 40.0%
AGACAAAGAAACTAAGGGGA+AGG - chr7_2:48124675-48124694 None:intergenic 40.0%
TCCCAAATGAAATGGGCAAT+AGG + chr7_2:48124778-48124797 Msa1060300:three_prime_UTR 40.0%
CCCTATTGCCCATTTCATTT+GGG - chr7_2:48124782-48124801 None:intergenic 40.0%
CCCAAATGAAATGGGCAATA+GGG + chr7_2:48124779-48124798 Msa1060300:three_prime_UTR 40.0%
TCCCTATTGCCCATTTCATT+TGG - chr7_2:48124783-48124802 None:intergenic 40.0%
! AAGAAGCGTGATAGCGAGAA+TGG - chr7_2:48117760-48117779 None:intergenic 45.0%
TTAAAATCGGAGCGTACACG+TGG + chr7_2:48118107-48118126 Msa1060300:intron 45.0%
CTGCATGAGATAGCTCAGAA+TGG + chr7_2:48118165-48118184 Msa1060300:intron 45.0%
! ACTATTTGCGTCGGTCAGAT+CGG + chr7_2:48118212-48118231 Msa1060300:intron 45.0%
!! GCATGCAGTTGATAATCCAG+AGG + chr7_2:48118388-48118407 Msa1060300:CDS 45.0%
GATCACAATGCAACCGCTAA+TGG - chr7_2:48118934-48118953 None:intergenic 45.0%
GTGTGAGTAATTGCATGGGT+AGG + chr7_2:48119422-48119441 Msa1060300:intron 45.0%
!! CGTTCTGAAGTTTCCTTCCA+TGG + chr7_2:48119677-48119696 Msa1060300:intron 45.0%
!! GTTCTGAGATCCGACCATTT+CGG + chr7_2:48119794-48119813 Msa1060300:intron 45.0%
CCCCTGTTAAACACATGTCT+TGG + chr7_2:48120039-48120058 Msa1060300:intron 45.0%
CGCCAAGACATGTGTTTAAC+AGG - chr7_2:48120044-48120063 None:intergenic 45.0%
GGGACACATTTCAGCATTCA+GGG + chr7_2:48120217-48120236 Msa1060300:intron 45.0%
TCAGAAAGGGGGAAAACGAT+GGG - chr7_2:48120373-48120392 None:intergenic 45.0%
ATCAGAAAGGGGGAAAACGA+TGG - chr7_2:48120374-48120393 None:intergenic 45.0%
CATCAGCACCAAATGTCATG+GGG - chr7_2:48121462-48121481 None:intergenic 45.0%
CACATCAGCACCAAATGTCA+TGG - chr7_2:48121460-48121479 None:intergenic 45.0%
CACATCAGCACCAAATGTCA+TGG + chr7_2:48121460-48121479 Msa1060300:intron 45.0%
CATCAGCACCAAATGTCATG+GGG + chr7_2:48121462-48121481 Msa1060300:intron 45.0%
CAGAAAGGGGGAAAACTATG+GGG + chr7_2:48121495-48121514 Msa1060300:intron 45.0%
GATGCATTGTGCTTGTAGAC+AGG - chr7_2:48122015-48122034 None:intergenic 45.0%
CTACAAGCACAATGCATCTC+TGG + chr7_2:48122017-48122036 Msa1060300:intron 45.0%
!!! GAGATCTAGTTTTGGGGTGT+CGG - chr7_2:48122185-48122204 None:intergenic 45.0%
GTATACGGAATAACGAGGGT+TGG - chr7_2:48122260-48122279 None:intergenic 45.0%
CGGTGTATACGGAATAACGA+GGG - chr7_2:48122264-48122283 None:intergenic 45.0%
ACGGTGTATACGGAATAACG+AGG - chr7_2:48122265-48122284 None:intergenic 45.0%
CAGGACTATACGCAATCACA+CGG + chr7_2:48122609-48122628 Msa1060300:intron 45.0%
ATGTGGGACTGGAAATCCAA+TGG + chr7_2:48122657-48122676 Msa1060300:CDS 45.0%
GAAATCCAATGGATGACTGC+TGG + chr7_2:48122668-48122687 Msa1060300:CDS 45.0%
!!! GCTGATTGTGCCATTGGTTT+TGG + chr7_2:48122730-48122749 Msa1060300:CDS 45.0%
GTCATGCCGTCATTCAAGAT+AGG + chr7_2:48122845-48122864 Msa1060300:CDS 45.0%
GACACCATGGATGATGACAT+TGG - chr7_2:48123010-48123029 None:intergenic 45.0%
ATCCATGATTGTAAGCCGAC+TGG + chr7_2:48123033-48123052 Msa1060300:CDS 45.0%
TCCATGATTGTAAGCCGACT+GGG + chr7_2:48123034-48123053 Msa1060300:CDS 45.0%
TCCTCCATCCAAAATGGGAA+GGG - chr7_2:48123080-48123099 None:intergenic 45.0%
CCATTGTCCTCCATCCAAAA+TGG - chr7_2:48123086-48123105 None:intergenic 45.0%
! CCATTTTGGATGGAGGACAA+TGG + chr7_2:48123083-48123102 Msa1060300:CDS 45.0%
! GGTGATGGCATTTCCATCTT+TGG + chr7_2:48123111-48123130 Msa1060300:CDS 45.0%
CGCAATTAGACAGAGAGTTG+TGG - chr7_2:48123158-48123177 None:intergenic 45.0%
TCTCTGTCTAATTGCGCTGA+TGG + chr7_2:48123162-48123181 Msa1060300:CDS 45.0%
!! GTGGTGGGTGAAGTAGTTAT+TGG - chr7_2:48123229-48123248 None:intergenic 45.0%
CTCAATTTACCTCGTTGTGG+TGG - chr7_2:48123245-48123264 None:intergenic 45.0%
!! TGCATACAACCATTTTGGGG+AGG + chr7_2:48123475-48123494 Msa1060300:CDS 45.0%
!! GCATACAACCATTTTGGGGA+GGG + chr7_2:48123476-48123495 Msa1060300:CDS 45.0%
GTCTTATCCAAAGGATGCCA+AGG + chr7_2:48123498-48123517 Msa1060300:CDS 45.0%
CTAGTTACCTTGGCATCCTT+TGG - chr7_2:48123508-48123527 None:intergenic 45.0%
AACTGGACGCTCCTTCAAAA+AGG - chr7_2:48123560-48123579 None:intergenic 45.0%
CAAATAGAGAGGCTCAGCTT+AGG - chr7_2:48123616-48123635 None:intergenic 45.0%
GAGACACTAGGAAGTTGGAA+TGG - chr7_2:48123693-48123712 None:intergenic 45.0%
CAACTTCCTAGTGTCTCAGA+GGG + chr7_2:48123696-48123715 Msa1060300:intron 45.0%
CACTGGGTGATGTATGCTAT+TGG + chr7_2:48123857-48123876 Msa1060300:CDS 45.0%
TGGGTGATGTATGCTATTGG+AGG + chr7_2:48123860-48123879 Msa1060300:CDS 45.0%
GAACCCACAATTAACAGCCA+AGG + chr7_2:48123890-48123909 Msa1060300:CDS 45.0%
GTTGCCTTGGCTGTTAATTG+TGG - chr7_2:48123897-48123916 None:intergenic 45.0%
!! TTTGGCAAAAGGGTTCTGAG+GGG - chr7_2:48123930-48123949 None:intergenic 45.0%
! CTTTGGCAAAAGGGTTCTGA+GGG - chr7_2:48123931-48123950 None:intergenic 45.0%
TCTTTGGCAAAAGGGTTCTG+AGG - chr7_2:48123932-48123951 None:intergenic 45.0%
! TCAGAACCCTTTTGCCAAAG+AGG + chr7_2:48123931-48123950 Msa1060300:CDS 45.0%
ATGTGGACAGGTGACAAAGA+GGG + chr7_2:48124044-48124063 Msa1060300:intron 45.0%
TGACAAAGAGGGTGGATACA+GGG + chr7_2:48124055-48124074 Msa1060300:CDS 45.0%
ATTCCAACCCTTCCATACTC+CGG - chr7_2:48124082-48124101 None:intergenic 45.0%
GAGTATGGAAGGGTTGGAAT+TGG + chr7_2:48124082-48124101 Msa1060300:CDS 45.0%
TATGGAAGGGTTGGAATTGG+AGG + chr7_2:48124085-48124104 Msa1060300:CDS 45.0%
! GAGGGAGACCTTTTGCTAAA+TGG + chr7_2:48124111-48124130 Msa1060300:CDS 45.0%
!!! GGAGCTTTTTTCACTCCATC+AGG + chr7_2:48124132-48124151 Msa1060300:CDS 45.0%
TGCTAGAGCCTCAAGTTTAG+GGG + chr7_2:48124176-48124195 Msa1060300:CDS 45.0%
! TGATTTGGCCCCTAAACTTG+AGG - chr7_2:48124187-48124206 None:intergenic 45.0%
!! GGTGTTATTAAATGTCGCCG+GGG + chr7_2:48124240-48124259 Msa1060300:CDS 45.0%
TGTATTAACACATGCCACCC+CGG - chr7_2:48124260-48124279 None:intergenic 45.0%
TCTATATGTATCCTCCCCTG+TGG + chr7_2:48124696-48124715 Msa1060300:three_prime_UTR 45.0%
CACACATACACAATCGAGAG+GGG - chr7_2:48124731-48124750 None:intergenic 45.0%
GCACACATACACAATCGAGA+GGG - chr7_2:48124732-48124751 None:intergenic 45.0%
!!! TAATTATAATTTTAATGAAA+TGG - chr7_2:48119325-48119344 None:intergenic 5.0%
!! ATACAATAAATTATAATTAT+TGG + chr7_2:48120115-48120134 Msa1060300:intron 5.0%
!! TACAATAAATTATAATTATT+GGG + chr7_2:48120116-48120135 Msa1060300:intron 5.0%
!! TAAAAATAAAAAATAAAATC+TGG + chr7_2:48120572-48120591 Msa1060300:intron 5.0%
!! TAAAAATAAAAAATAAAATC+TGG + chr7_2:48120572-48120591 Msa1060300:intron 5.0%
!!! ATTTTTTTAAAAAAAAATTC+TGG + chr7_2:48120715-48120734 Msa1060300:intron 5.0%
!!! GAATTTTTTTAAAAAAATTT+CGG - chr7_2:48120748-48120767 None:intergenic 5.0%
!!! TATAATTATTATGTTTTTAA+GGG + chr7_2:48120897-48120916 Msa1060300:intron 5.0%
!!! AAATAATTTTTTTAAAATTC+TGG - chr7_2:48121189-48121208 None:intergenic 5.0%
!!! CAATTTTTTTAAAAAAATTT+CGG + chr7_2:48121222-48121241 Msa1060300:intron 5.0%
!!! AATTTTTTTAAAAAAAATTC+TGG - chr7_2:48121255-48121274 None:intergenic 5.0%
!! TGATATAAAATTAATTAAAA+AGG - chr7_2:48123336-48123355 None:intergenic 5.0%
!! TGGTGTTGCGTGTGAGAGAA+AGG - chr7_2:48117666-48117685 None:intergenic 50.0%
GGAGCGTACACGTGGTATAA+AGG + chr7_2:48118115-48118134 Msa1060300:intron 50.0%
TCCAGAGGAGATTGCTTCCA+TGG + chr7_2:48118403-48118422 Msa1060300:CDS 50.0%
ACCATGGAAGCAATCTCCTC+TGG - chr7_2:48118407-48118426 None:intergenic 50.0%
GGCAGACACAAAAGGAACAG+TGG - chr7_2:48119099-48119118 None:intergenic 50.0%
!!! TTGACGGTGCCGTTTTTCCA+TGG - chr7_2:48119388-48119407 None:intergenic 50.0%
CACATGTCTTGGCGGAGATT+TGG + chr7_2:48120050-48120069 Msa1060300:intron 50.0%
GGGGACACATTTCAGCATTC+AGG + chr7_2:48120216-48120235 Msa1060300:intron 50.0%
GGGGACCAAAATCGCACAAT+TGG - chr7_2:48121543-48121562 None:intergenic 50.0%
CAGAAAGGGGGAAAACGATG+GGG - chr7_2:48120372-48120391 None:intergenic 50.0%
GGGGACCAAAATCGCACAAT+TGG + chr7_2:48121543-48121562 Msa1060300:intron 50.0%
CTGTCCTACATCACCCAACA+AGG + chr7_2:48121951-48121970 Msa1060300:intron 50.0%
TCCTACATCACCCAACAAGG+TGG + chr7_2:48121954-48121973 Msa1060300:intron 50.0%
CCTACATCACCCAACAAGGT+GGG + chr7_2:48121955-48121974 Msa1060300:intron 50.0%
CTACATCACCCAACAAGGTG+GGG + chr7_2:48121956-48121975 Msa1060300:intron 50.0%
!!! ATCTAGTTTTGGGGTGTCGG+TGG - chr7_2:48122182-48122201 None:intergenic 50.0%
TGATGAGGGATGAGACTGGT+GGG - chr7_2:48122330-48122349 None:intergenic 50.0%
TGTCTGATGAGGGATGAGAC+TGG - chr7_2:48122334-48122353 None:intergenic 50.0%
TACGCAATCACACGGAGAGA+AGG + chr7_2:48122617-48122636 Msa1060300:CDS 50.0%
TTTGGTACAGACGCCGAAAG+CGG + chr7_2:48122704-48122723 Msa1060300:CDS 50.0%
CACAATCAGCCAACCGCTTT+CGG - chr7_2:48122720-48122739 None:intergenic 50.0%
ATTGGCACCACGACCATCTA+TGG - chr7_2:48122944-48122963 None:intergenic 50.0%
! TCCCAGTCGGCTTACAATCA+TGG - chr7_2:48123038-48123057 None:intergenic 50.0%
TAAGCCGACTGGGAATGCTA+TGG + chr7_2:48123044-48123063 Msa1060300:CDS 50.0%
CGAACCATAGCATTCCCAGT+CGG - chr7_2:48123051-48123070 None:intergenic 50.0%
CCTCCATCCAAAATGGGAAG+GGG - chr7_2:48123079-48123098 None:intergenic 50.0%
GTCCTCCATCCAAAATGGGA+AGG - chr7_2:48123081-48123100 None:intergenic 50.0%
! AGGACAATGGCTGATGGTGA+TGG + chr7_2:48123096-48123115 Msa1060300:CDS 50.0%
! ATTGGAAACGGTAATGGCGG+TGG - chr7_2:48123211-48123230 None:intergenic 50.0%
GGATAAGACCCTCCCCAAAA+TGG - chr7_2:48123487-48123506 None:intergenic 50.0%
! TTGGGGAGGGTCTTATCCAA+AGG + chr7_2:48123489-48123508 Msa1060300:CDS 50.0%
!! CCTCTGAGACACTAGGAAGT+TGG - chr7_2:48123698-48123717 None:intergenic 50.0%
CCAACTTCCTAGTGTCTCAG+AGG + chr7_2:48123695-48123714 Msa1060300:intron 50.0%
TAGACACGGGTATTTCCACG+TGG + chr7_2:48123817-48123836 Msa1060300:CDS 50.0%
GATGTGGACAGGTGACAAAG+AGG + chr7_2:48124043-48124062 Msa1060300:intron 50.0%
GTGACAAAGAGGGTGGATAC+AGG + chr7_2:48124054-48124073 Msa1060300:CDS 50.0%
GGTTGGAATTGGAGGTCTGA+GGG + chr7_2:48124093-48124112 Msa1060300:CDS 50.0%
GGAACTTTAACTGCAGGTGC+TGG + chr7_2:48124219-48124238 Msa1060300:CDS 50.0%
GTTATTAAATGTCGCCGGGG+TGG + chr7_2:48124243-48124262 Msa1060300:CDS 50.0%
! AGGGGTACACTATTCCACAG+GGG - chr7_2:48124713-48124732 None:intergenic 50.0%
! GAGGGGTACACTATTCCACA+GGG - chr7_2:48124714-48124733 None:intergenic 50.0%
! AGAGGGGTACACTATTCCAC+AGG - chr7_2:48124715-48124734 None:intergenic 50.0%
GGCACACATACACAATCGAG+AGG - chr7_2:48124733-48124752 None:intergenic 50.0%
TCAGCACAGTCTGACCCACT+TGG + chr7_2:48118810-48118829 Msa1060300:intron 55.0%
CCCACCTTGTTGGGTGATGT+AGG - chr7_2:48121958-48121977 None:intergenic 55.0%
GTGGCTTACCCCACCTTGTT+GGG - chr7_2:48121967-48121986 None:intergenic 55.0%
TGTGGCTTACCCCACCTTGT+TGG - chr7_2:48121968-48121987 None:intergenic 55.0%
CTGATGAGGGATGAGACTGG+TGG - chr7_2:48122331-48122350 None:intergenic 55.0%
! CGGTTGGCTGATTGTGCCAT+TGG + chr7_2:48122724-48122743 Msa1060300:CDS 55.0%
GGCGTTGCGACCAAAACCAA+TGG - chr7_2:48122743-48122762 None:intergenic 55.0%
!! GGTTTTGGTCGCAACGCCAT+TGG + chr7_2:48122745-48122764 Msa1060300:CDS 55.0%
TTTGGTCGCAACGCCATTGG+TGG + chr7_2:48122748-48122767 Msa1060300:CDS 55.0%
CAACGTAGTACCTTCCGTCG+CGG - chr7_2:48122774-48122793 None:intergenic 55.0%
AGTGCCAGGTCTTGGGTTCA+CGG - chr7_2:48122821-48122840 None:intergenic 55.0%
! CGTAGCTCCCCTTCCCATTT+TGG + chr7_2:48123069-48123088 Msa1060300:CDS 55.0%
! GCTCCCCTTCCCATTTTGGA+TGG + chr7_2:48123073-48123092 Msa1060300:CDS 55.0%
! CCCCTTCCCATTTTGGATGG+AGG + chr7_2:48123076-48123095 Msa1060300:CDS 55.0%
GGATGGAGGACAATGGCTGA+TGG + chr7_2:48123090-48123109 Msa1060300:CDS 55.0%
CTACTTCACCCACCACAACG+AGG + chr7_2:48123233-48123252 Msa1060300:CDS 55.0%
!! AGAGGTCCCTCTGAGACACT+AGG - chr7_2:48123705-48123724 None:intergenic 55.0%
! GGGCAAGGTATCTGTTGCCT+TGG - chr7_2:48123910-48123929 None:intergenic 55.0%
!! CAAAAGGGTTCTGAGGGGCA+AGG - chr7_2:48123925-48123944 None:intergenic 55.0%
TGGACAGGTGACAAAGAGGG+TGG + chr7_2:48124047-48124066 Msa1060300:intron 55.0%
AAGAGGGTGGATACAGGGTC+CGG + chr7_2:48124060-48124079 Msa1060300:CDS 55.0%
TGGATACAGGGTCCGGAGTA+TGG + chr7_2:48124067-48124086 Msa1060300:CDS 55.0%
TACAGGGTCCGGAGTATGGA+AGG + chr7_2:48124071-48124090 Msa1060300:CDS 55.0%
ACAGGGTCCGGAGTATGGAA+GGG + chr7_2:48124072-48124091 Msa1060300:CDS 55.0%
GGGTTGGAATTGGAGGTCTG+AGG + chr7_2:48124092-48124111 Msa1060300:CDS 55.0%
TCCATCAGGAAGAGGAGCTG+CGG + chr7_2:48124146-48124165 Msa1060300:CDS 55.0%
GGTACACTATTCCACAGGGG+AGG - chr7_2:48124710-48124729 None:intergenic 55.0%
! GACTGGTGGGTCGGTCATGT+GGG - chr7_2:48122317-48122336 None:intergenic 60.0%
! AGACTGGTGGGTCGGTCATG+TGG - chr7_2:48122318-48122337 None:intergenic 60.0%
! GAGGGATGAGACTGGTGGGT+CGG - chr7_2:48122326-48122345 None:intergenic 60.0%
CAGCGCCAGCAGTCATCCAT+TGG - chr7_2:48122676-48122695 None:intergenic 60.0%
GCTGGCGCTGTGACAAGCTT+TGG + chr7_2:48122686-48122705 Msa1060300:CDS 60.0%
GTACAGACGCCGAAAGCGGT+TGG + chr7_2:48122708-48122727 Msa1060300:CDS 60.0%
TCACGGGGTCGTCGTCTCTT+GGG - chr7_2:48122804-48122823 None:intergenic 60.0%
TTCACGGGGTCGTCGTCTCT+TGG - chr7_2:48122805-48122824 None:intergenic 60.0%
TGCCAGGTCTTGGGTTCACG+GGG - chr7_2:48122819-48122838 None:intergenic 60.0%
GTGCCAGGTCTTGGGTTCAC+GGG - chr7_2:48122820-48122839 None:intergenic 60.0%
!! GACGGAGAGTGCCAGGTCTT+GGG - chr7_2:48122828-48122847 None:intergenic 60.0%
!! TGACGGAGAGTGCCAGGTCT+TGG - chr7_2:48122829-48122848 None:intergenic 60.0%
GGTCCGGAGTATGGAAGGGT+TGG + chr7_2:48124076-48124095 Msa1060300:CDS 60.0%
! AACGCCATTGGTGGCCGCGA+CGG + chr7_2:48122757-48122776 Msa1060300:CDS 65.0%
GACCCCGTGAACCCAAGACC+TGG + chr7_2:48122814-48122833 Msa1060300:CDS 65.0%
!! ACGGCATGACGGAGAGTGCC+AGG - chr7_2:48122835-48122854 None:intergenic 65.0%
GCCGCAGCTCCTCTTCCTGA+TGG - chr7_2:48124150-48124169 None:intergenic 65.0%
CCTTCCGTCGCGGCCACCAA+TGG - chr7_2:48122764-48122783 None:intergenic 70.0%
! CCATTGGTGGCCGCGACGGA+AGG + chr7_2:48122761-48122780 Msa1060300:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 48117641 48124835 48117641 ID=Msa1060300;Name=Msa1060300
chr7_2 mRNA 48117641 48124835 48117641 ID=Msa1060300-mRNA-1;Parent=Msa1060300;Name=Msa1060300-mRNA-1;_AED=0.11;_eAED=0.11;_QI=82|1|1|1|1|1|7|560|444
chr7_2 exon 48117641 48117817 48117641 ID=Msa1060300-mRNA-1:exon:8701;Parent=Msa1060300-mRNA-1
chr7_2 exon 48117968 48118030 48117968 ID=Msa1060300-mRNA-1:exon:8702;Parent=Msa1060300-mRNA-1
chr7_2 exon 48118364 48118432 48118364 ID=Msa1060300-mRNA-1:exon:8703;Parent=Msa1060300-mRNA-1
chr7_2 exon 48122612 48123254 48122612 ID=Msa1060300-mRNA-1:exon:8704;Parent=Msa1060300-mRNA-1
chr7_2 exon 48123416 48123519 48123416 ID=Msa1060300-mRNA-1:exon:8705;Parent=Msa1060300-mRNA-1
chr7_2 exon 48123814 48123952 48123814 ID=Msa1060300-mRNA-1:exon:8706;Parent=Msa1060300-mRNA-1
chr7_2 exon 48124054 48124835 48124054 ID=Msa1060300-mRNA-1:exon:8707;Parent=Msa1060300-mRNA-1
chr7_2 five_prime_UTR 48117641 48117722 48117641 ID=Msa1060300-mRNA-1:five_prime_utr;Parent=Msa1060300-mRNA-1
chr7_2 CDS 48117723 48117817 48117723 ID=Msa1060300-mRNA-1:cds;Parent=Msa1060300-mRNA-1
chr7_2 CDS 48117968 48118030 48117968 ID=Msa1060300-mRNA-1:cds;Parent=Msa1060300-mRNA-1
chr7_2 CDS 48118364 48118432 48118364 ID=Msa1060300-mRNA-1:cds;Parent=Msa1060300-mRNA-1
chr7_2 CDS 48122612 48123254 48122612 ID=Msa1060300-mRNA-1:cds;Parent=Msa1060300-mRNA-1
chr7_2 CDS 48123416 48123519 48123416 ID=Msa1060300-mRNA-1:cds;Parent=Msa1060300-mRNA-1
chr7_2 CDS 48123814 48123952 48123814 ID=Msa1060300-mRNA-1:cds;Parent=Msa1060300-mRNA-1
chr7_2 CDS 48124054 48124275 48124054 ID=Msa1060300-mRNA-1:cds;Parent=Msa1060300-mRNA-1
chr7_2 three_prime_UTR 48124276 48124835 48124276 ID=Msa1060300-mRNA-1:three_prime_utr;Parent=Msa1060300-mRNA-1
Gene Sequence

>Msa1060300

ATGGAGTTACGGTTTTCATCACAGTTCGTTTTCACCATTCTCGCTATCACGCTTCTTTTTGCTTTCACCAATGCTATTGATCATAACGACTCAAGTGTTGTGAATGGAGAAGAGAAGTTGAAGATGCAGAGCTTGAATAATTCATCAATGGCGGAAAGCTTAAGTAATGGTGCTATCAACGAGCATGCAGTTGATAATCCAGAGGAGATTGCTTCCATGGTTGATACGACTATACGCAATCACACGGAGAGAAGGAGTCTGAGTTTTTTCTCATGTGGGACTGGAAATCCAATGGATGACTGCTGGCGCTGTGACAAGCTTTGGTACAGACGCCGAAAGCGGTTGGCTGATTGTGCCATTGGTTTTGGTCGCAACGCCATTGGTGGCCGCGACGGAAGGTACTACGTTGTGAATAACCCAAGAGACGACGACCCCGTGAACCCAAGACCTGGCACTCTCCGTCATGCCGTCATTCAAGATAGGCCATTATGGATCGTTTTCAAGAGAGACATGGTGATCACCCTGAAGCAAGAACTGATCATGAACAGTTTTAAGACCATAGATGGTCGTGGTGCCAATGTTCATATTGCCTTTGGAGCATGCATTACTATTCAATTTATCACCAATGTCATCATCCATGGTGTCCATATCCATGATTGTAAGCCGACTGGGAATGCTATGGTTCGTAGCTCCCCTTCCCATTTTGGATGGAGGACAATGGCTGATGGTGATGGCATTTCCATCTTTGGTTCCAGTCATATTTGGATTGACCACAACTCTCTGTCTAATTGCGCTGATGGTCTTGTTGATGCTATTATGGGATCCACCGCCATTACCGTTTCCAATAACTACTTCACCCACCACAACGAGGTTATGCTATTGGGTCACAGTGACTCATATGTACGTGACAAGCAGATGCAAGTAACCATTGCATACAACCATTTTGGGGAGGGTCTTATCCAAAGGATGCCAAGATGTAGACACGGGTATTTCCACGTGGTAAACAATGACTATACACACTGGGTGATGTATGCTATTGGAGGCAGTGCTGAACCCACAATTAACAGCCAAGGCAACAGATACCTTGCCCCTCAGAACCCTTTTGCCAAAGAGGTGACAAAGAGGGTGGATACAGGGTCCGGAGTATGGAAGGGTTGGAATTGGAGGTCTGAGGGAGACCTTTTGCTAAATGGAGCTTTTTTCACTCCATCAGGAAGAGGAGCTGCGGCAAGCTATGCTAGAGCCTCAAGTTTAGGGGCCAAATCATCTTCTTTAGTCGGAACTTTAACTGCAGGTGCTGGTGTTATTAAATGTCGCCGGGGTGGCATGTGTTAA
Protein sequence

>Msa1060300

MELRFSSQFVFTILAITLLFAFTNAIDHNDSSVVNGEEKLKMQSLNNSSMAESLSNGAINEHAVDNPEEIASMVDTTIRNHTERRSLSFFSCGTGNPMDDCWRCDKLWYRRRKRLADCAIGFGRNAIGGRDGRYYVVNNPRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIAFGACITIQFITNVIIHGVHIHDCKPTGNAMVRSSPSHFGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLVDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSAEPTINSQGNRYLAPQNPFAKEVTKRVDTGSGVWKGWNWRSEGDLLLNGAFFTPSGRGAAASYARASSLGAKSSSLVGTLTAGAGVIKCRRGGMC*