Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414490 | sp|Q96253|ATP5E_ARATH | 47.945 | 73 | 35 | 2 | 1 | 73 | 1 | 70 | 3.76e-18 | 73.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414490 | G7JVK8 | 73.239 | 71 | 9 | 1 | 8 | 68 | 1 | 71 | 2.63e-27 | 103 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016670 | Msa1414490 | 0.820202 | 7.767544e-53 | -8.615850e-47 |
| Msa0017510 | Msa1414490 | 0.816677 | 4.888776e-52 | -8.615850e-47 |
| Msa0032090 | Msa1414490 | 0.803900 | 2.795800e-49 | -8.615850e-47 |
| Msa0032430 | Msa1414490 | 0.800551 | 1.366497e-48 | -8.615850e-47 |
| Msa0032920 | Msa1414490 | -0.806703 | 7.233193e-50 | -8.615850e-47 |
| Msa0040690 | Msa1414490 | 0.814491 | 1.499219e-51 | -8.615850e-47 |
| Msa0074320 | Msa1414490 | 0.810564 | 1.082549e-50 | -8.615850e-47 |
| Msa0079380 | Msa1414490 | 0.809866 | 1.530973e-50 | -8.615850e-47 |
| Msa0089630 | Msa1414490 | 0.804526 | 2.070661e-49 | -8.615850e-47 |
| Msa0110970 | Msa1414490 | 0.816237 | 6.133613e-52 | -8.615850e-47 |
| Msa1353060 | Msa1414490 | 0.823064 | 1.693776e-53 | -8.615850e-47 |
| Msa1374120 | Msa1414490 | 0.810810 | 9.577487e-51 | -8.615850e-47 |
| Msa1382620 | Msa1414490 | 0.826291 | 2.941085e-54 | -8.615850e-47 |
| Msa1414490 | Msa1423350 | 0.804550 | 2.046653e-49 | -8.615850e-47 |
| Msa0615440 | Msa1414490 | 0.806366 | 8.518452e-50 | -8.615850e-47 |
| Msa0625070 | Msa1414490 | 0.834219 | 3.401048e-56 | -8.615850e-47 |
| Msa0625140 | Msa1414490 | 0.816275 | 6.015003e-52 | -8.615850e-47 |
| Msa0682330 | Msa1414490 | 0.802423 | 5.651378e-49 | -8.615850e-47 |
| Msa0698490 | Msa1414490 | 0.810050 | 1.397685e-50 | -8.615850e-47 |
| Msa0698660 | Msa1414490 | 0.812509 | 4.091400e-51 | -8.615850e-47 |
| Msa0703230 | Msa1414490 | 0.806964 | 6.369217e-50 | -8.615850e-47 |
| Msa0708520 | Msa1414490 | 0.814380 | 1.586490e-51 | -8.615850e-47 |
| Msa0722810 | Msa1414490 | 0.817877 | 2.625373e-52 | -8.615850e-47 |
| Msa0722960 | Msa1414490 | 0.820345 | 7.205907e-53 | -8.615850e-47 |
| Msa0750880 | Msa1414490 | 0.824454 | 8.002671e-54 | -8.615850e-47 |
| Msa0763830 | Msa1414490 | 0.817990 | 2.475086e-52 | -8.615850e-47 |
| Msa0803890 | Msa1414490 | 0.807620 | 4.624462e-50 | -8.615850e-47 |
| Msa0808270 | Msa1414490 | 0.804514 | 2.082938e-49 | -8.615850e-47 |
| Msa0813740 | Msa1414490 | 0.800123 | 1.670571e-48 | -8.615850e-47 |
| Msa0145440 | Msa1414490 | 0.808822 | 2.563625e-50 | -8.615850e-47 |
| Msa0157290 | Msa1414490 | 0.815517 | 8.875918e-52 | -8.615850e-47 |
| Msa0172070 | Msa1414490 | 0.800536 | 1.376724e-48 | -8.615850e-47 |
| Msa0175780 | Msa1414490 | 0.826308 | 2.913817e-54 | -8.615850e-47 |
| Msa0186890 | Msa1414490 | 0.806228 | 9.107140e-50 | -8.615850e-47 |
| Msa0187690 | Msa1414490 | 0.814529 | 1.470570e-51 | -8.615850e-47 |
| Msa1271990 | Msa1414490 | 0.805573 | 1.250643e-49 | -8.615850e-47 |
| Msa1283170 | Msa1414490 | 0.803120 | 4.056463e-49 | -8.615850e-47 |
| Msa1292830 | Msa1414490 | 0.811271 | 7.610300e-51 | -8.615850e-47 |
| Msa1316780 | Msa1414490 | 0.805268 | 1.448843e-49 | -8.615850e-47 |
| Msa0366240 | Msa1414490 | 0.806683 | 7.301285e-50 | -8.615850e-47 |
| Msa0369050 | Msa1414490 | 0.819490 | 1.129862e-52 | -8.615850e-47 |
| Msa0385580 | Msa1414490 | 0.810289 | 1.241159e-50 | -8.615850e-47 |
| Msa0395820 | Msa1414490 | 0.800587 | 1.343588e-48 | -8.615850e-47 |
| Msa0419820 | Msa1414490 | 0.806038 | 9.984581e-50 | -8.615850e-47 |
| Msa1013400 | Msa1414490 | 0.816807 | 4.571409e-52 | -8.615850e-47 |
| Msa1045140 | Msa1414490 | 0.804900 | 1.730033e-49 | -8.615850e-47 |
| Msa1066490 | Msa1414490 | 0.816334 | 5.834634e-52 | -8.615850e-47 |
| Msa1093530 | Msa1414490 | 0.816655 | 4.945486e-52 | -8.615850e-47 |
| Msa1097640 | Msa1414490 | 0.825188 | 5.370967e-54 | -8.615850e-47 |
| Msa0292400 | Msa1414490 | 0.808870 | 2.503936e-50 | -8.615850e-47 |
| Msa0306300 | Msa1414490 | 0.814451 | 1.530358e-51 | -8.615850e-47 |
| Msa1127890 | Msa1414490 | 0.800155 | 1.645649e-48 | -8.615850e-47 |
| Msa1139810 | Msa1414490 | 0.810722 | 1.000929e-50 | -8.615850e-47 |
| Msa1147900 | Msa1414490 | 0.800426 | 1.449387e-48 | -8.615850e-47 |
| Msa1207270 | Msa1414490 | 0.806445 | 8.196592e-50 | -8.615850e-47 |
| Msa1209460 | Msa1414490 | 0.821039 | 4.989236e-53 | -8.615850e-47 |
| Msa0529680 | Msa1414490 | 0.907288 | 5.958786e-81 | -8.615850e-47 |
| Msa0541860 | Msa1414490 | 0.810147 | 1.331908e-50 | -8.615850e-47 |
| Msa0546680 | Msa1414490 | 0.808783 | 2.614393e-50 | -8.615850e-47 |
| Msa0565960 | Msa1414490 | 0.820480 | 6.708389e-53 | -8.615850e-47 |
| Msa0569200 | Msa1414490 | 0.841107 | 5.805434e-58 | -8.615850e-47 |
| Msa0871270 | Msa1414490 | 0.807242 | 5.562781e-50 | -8.615850e-47 |
| Msa0880140 | Msa1414490 | 0.819204 | 1.312757e-52 | -8.615850e-47 |
| Msa0902760 | Msa1414490 | 0.818431 | 1.967818e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414490 | MtrunA17_Chr4g0000551 | 73.239 | 71 | 9 | 1 | 8 | 68 | 1 | 71 | 5.06e-31 | 103 |
| Msa1414490 | MtrunA17_Chr5g0417121 | 56.164 | 73 | 29 | 2 | 1 | 73 | 1 | 70 | 1.24e-23 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414490 | AT1G51650.1 | 47.945 | 73 | 35 | 2 | 1 | 73 | 1 | 70 | 3.82e-19 | 73.9 |
Find 19 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGACAGCCAATCTTATT+AGG | 0.245215 | tig0024129:+26531 | Msa1414490:CDS |
| CGACGTCGTCTTGATTCCTC+TGG | 0.371709 | tig0024129:-28792 | None:intergenic |
| GCAGAGGAAAAGTAGCGATT+TGG | 0.379656 | tig0024129:+26474 | Msa1414490:CDS |
| CACATGGATCGACAGTATTC+CGG | 0.387356 | tig0024129:+26625 | Msa1414490:CDS |
| AAGGCAATTCCTAATAAGAT+TGG | 0.392366 | tig0024129:-26540 | None:intergenic |
| TCTTATTAGGAATTGCCTTA+AGG | 0.405336 | tig0024129:+26544 | Msa1414490:CDS |
| GTAGCGATTTGGAGAGCAGC+AGG | 0.448954 | tig0024129:+26485 | Msa1414490:CDS |
| AATAAGATTGGCTGTCAAGT+TGG | 0.465236 | tig0024129:-26528 | None:intergenic |
| GTAACGAAAACAAGTGTAAG+AGG | 0.479461 | tig0024129:+26399 | Msa1414490:five_prime_UTR |
| CGATCAATGGCGTCAGGCAG+AGG | 0.495109 | tig0024129:+26458 | Msa1414490:exon |
| GATAATCGATCAATGGCGTC+AGG | 0.508621 | tig0024129:+26452 | Msa1414490:exon |
| CGTATCAGATAATCGATCAA+TGG | 0.522049 | tig0024129:+26445 | Msa1414490:exon |
| TCGCTGAAACGCATTCATGA+TGG | 0.530943 | tig0024129:+28812 | Msa1414490:CDS |
| TTCAGTACTTGCTTCCCACA+TGG | 0.547985 | tig0024129:+26609 | Msa1414490:CDS |
| GACGTCGTCTTGATTCCTCT+GGG | 0.578095 | tig0024129:-28791 | None:intergenic |
| CGGAATACTGTCGATCCATG+TGG | 0.617541 | tig0024129:-26624 | None:intergenic |
| GGAATACTGTCGATCCATGT+GGG | 0.618997 | tig0024129:-26623 | None:intergenic |
| TAGCGATTTGGAGAGCAGCA+GGG | 0.642009 | tig0024129:+26486 | Msa1414490:CDS |
| CATTCATACAGACATCCCAG+AGG | 0.796801 | tig0024129:+28776 | Msa1414490:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCATTTTCTTAAGTTATTA+CGG | + | tig0024129:27122-27141 | Msa1414490:intron | 15.0% |
| !!! | ATTGTTTTCATTATTATTAG+TGG | + | tig0024129:27397-27416 | Msa1414490:intron | 15.0% |
| !!! | ATTTTTCTTTGGAAAATAAT+TGG | + | tig0024129:28133-28152 | Msa1414490:intron | 15.0% |
| !!! | ATTTGAATGTGTTTTTTAAA+GGG | - | tig0024129:28253-28272 | None:intergenic | 15.0% |
| !! | TATACAAAACTAAATAAACT+TGG | - | tig0024129:28709-28728 | None:intergenic | 15.0% |
| !!! | TTCATTTTCTTAAGTTATTA+CGG | + | tig0024129:27122-27141 | Msa1414490:intron | 15.0% |
| !!! | ATTGTTTTCATTATTATTAG+TGG | + | tig0024129:27397-27416 | Msa1414490:intron | 15.0% |
| !!! | ATTTTTCTTTGGAAAATAAT+TGG | + | tig0024129:28133-28152 | Msa1414490:intron | 15.0% |
| !!! | ATTTGAATGTGTTTTTTAAA+GGG | - | tig0024129:28253-28272 | None:intergenic | 15.0% |
| !! | TATACAAAACTAAATAAACT+TGG | - | tig0024129:28709-28728 | None:intergenic | 15.0% |
| !!! | TTTTTTTCTTTCTAAGAACT+CGG | - | tig0024129:26802-26821 | None:intergenic | 20.0% |
| !! | CCTATCATCTTAATTAATTA+GGG | - | tig0024129:26990-27009 | None:intergenic | 20.0% |
| !! | CCTAATTAATTAAGATGATA+GGG | + | tig0024129:26988-27007 | Msa1414490:intron | 20.0% |
| !!! | TCATTTTCTTAAGTTATTAC+GGG | + | tig0024129:27123-27142 | Msa1414490:intron | 20.0% |
| !!! | ATTTTGTCTCAAAAATATCA+TGG | - | tig0024129:27533-27552 | None:intergenic | 20.0% |
| !!! | CAATTTAGTCTAAAATATCA+TGG | - | tig0024129:27653-27672 | None:intergenic | 20.0% |
| !!! | ATATTTTAGACTAAATTGAG+AGG | + | tig0024129:27655-27674 | Msa1414490:intron | 20.0% |
| !! | TCAATTAAACAGAAATGAAA+TGG | - | tig0024129:27893-27912 | None:intergenic | 20.0% |
| !! | TTCATTTCTGTTTAATTGAT+TGG | + | tig0024129:27894-27913 | Msa1414490:intron | 20.0% |
| !!! | TTTTGGTAAAGATTTTTCTT+TGG | + | tig0024129:28122-28141 | Msa1414490:intron | 20.0% |
| !!! | AGAATTTTATCGCTTTTAAT+CGG | - | tig0024129:28180-28199 | None:intergenic | 20.0% |
| !!! | CATTTGAATGTGTTTTTTAA+AGG | - | tig0024129:28254-28273 | None:intergenic | 20.0% |
| !!! | TTTAATGTGATGTTTTCATT+AGG | + | tig0024129:28399-28418 | Msa1414490:intron | 20.0% |
| !!! | TTTTTTTCTTTCTAAGAACT+CGG | - | tig0024129:26802-26821 | None:intergenic | 20.0% |
| !! | CCTATCATCTTAATTAATTA+GGG | - | tig0024129:26990-27009 | None:intergenic | 20.0% |
| !! | CCTAATTAATTAAGATGATA+GGG | + | tig0024129:26988-27007 | Msa1414490:intron | 20.0% |
| !!! | TCATTTTCTTAAGTTATTAC+GGG | + | tig0024129:27123-27142 | Msa1414490:intron | 20.0% |
| !!! | ATTTTGTCTCAAAAATATCA+TGG | - | tig0024129:27533-27552 | None:intergenic | 20.0% |
| !!! | CAATTTAGTCTAAAATATCA+TGG | - | tig0024129:27653-27672 | None:intergenic | 20.0% |
| !!! | ATATTTTAGACTAAATTGAG+AGG | + | tig0024129:27655-27674 | Msa1414490:intron | 20.0% |
| !! | TCAATTAAACAGAAATGAAA+TGG | - | tig0024129:27893-27912 | None:intergenic | 20.0% |
| !! | TTCATTTCTGTTTAATTGAT+TGG | + | tig0024129:27894-27913 | Msa1414490:intron | 20.0% |
| !!! | TTTTGGTAAAGATTTTTCTT+TGG | + | tig0024129:28122-28141 | Msa1414490:intron | 20.0% |
| !!! | AGAATTTTATCGCTTTTAAT+CGG | - | tig0024129:28180-28199 | None:intergenic | 20.0% |
| !!! | CATTTGAATGTGTTTTTTAA+AGG | - | tig0024129:28254-28273 | None:intergenic | 20.0% |
| !!! | TTTAATGTGATGTTTTCATT+AGG | + | tig0024129:28399-28418 | Msa1414490:intron | 20.0% |
| ! | CCATAATGTTAACTTTCTTA+GGG | + | tig0024129:26895-26914 | Msa1414490:intron | 25.0% |
| ! | CCCTAATTAATTAAGATGAT+AGG | + | tig0024129:26987-27006 | Msa1414490:intron | 25.0% |
| ! | CCCTATCATCTTAATTAATT+AGG | - | tig0024129:26991-27010 | None:intergenic | 25.0% |
| !!! | GAACACATTTTTTAGATTGA+AGG | + | tig0024129:27028-27047 | Msa1414490:intron | 25.0% |
| ! | AGATGATTTAGAAACTACTT+TGG | + | tig0024129:27218-27237 | Msa1414490:intron | 25.0% |
| !!! | CATTTTCATTGATTTCTGAA+AGG | - | tig0024129:27369-27388 | None:intergenic | 25.0% |
| ! | TCATTTAATTACCTAACTTG+TGG | + | tig0024129:27728-27747 | Msa1414490:intron | 25.0% |
| ! | TTTGTGCTTTATGAAGAAAA+GGG | - | tig0024129:27803-27822 | None:intergenic | 25.0% |
| !! | TTTTGTGCTTTATGAAGAAA+AGG | - | tig0024129:27804-27823 | None:intergenic | 25.0% |
| !!! | CTTTTTCAAACTTTTGTCAT+TGG | + | tig0024129:27936-27955 | Msa1414490:intron | 25.0% |
| !!! | CAATGAGTTTTGCTTTAAAT+TGG | + | tig0024129:28200-28219 | Msa1414490:intron | 25.0% |
| ! | ATTTCACTTCGAATCATAAT+TGG | + | tig0024129:28297-28316 | Msa1414490:intron | 25.0% |
| ! | TATTGATCTTAATCAGTTTG+AGG | - | tig0024129:28336-28355 | None:intergenic | 25.0% |
| ! | ATGAAAACATCACATTAAAG+TGG | - | tig0024129:28398-28417 | None:intergenic | 25.0% |
| ! | CCATAATGTTAACTTTCTTA+GGG | + | tig0024129:26895-26914 | Msa1414490:intron | 25.0% |
| ! | CCCTAATTAATTAAGATGAT+AGG | + | tig0024129:26987-27006 | Msa1414490:intron | 25.0% |
| ! | CCCTATCATCTTAATTAATT+AGG | - | tig0024129:26991-27010 | None:intergenic | 25.0% |
| !!! | GAACACATTTTTTAGATTGA+AGG | + | tig0024129:27028-27047 | Msa1414490:intron | 25.0% |
| ! | AGATGATTTAGAAACTACTT+TGG | + | tig0024129:27218-27237 | Msa1414490:intron | 25.0% |
| !!! | CATTTTCATTGATTTCTGAA+AGG | - | tig0024129:27369-27388 | None:intergenic | 25.0% |
| ! | TCATTTAATTACCTAACTTG+TGG | + | tig0024129:27728-27747 | Msa1414490:intron | 25.0% |
| ! | TTTGTGCTTTATGAAGAAAA+GGG | - | tig0024129:27803-27822 | None:intergenic | 25.0% |
| !! | TTTTGTGCTTTATGAAGAAA+AGG | - | tig0024129:27804-27823 | None:intergenic | 25.0% |
| !!! | CTTTTTCAAACTTTTGTCAT+TGG | + | tig0024129:27936-27955 | Msa1414490:intron | 25.0% |
| !!! | CAATGAGTTTTGCTTTAAAT+TGG | + | tig0024129:28200-28219 | Msa1414490:intron | 25.0% |
| ! | ATTTCACTTCGAATCATAAT+TGG | + | tig0024129:28297-28316 | Msa1414490:intron | 25.0% |
| ! | TATTGATCTTAATCAGTTTG+AGG | - | tig0024129:28336-28355 | None:intergenic | 25.0% |
| ! | ATGAAAACATCACATTAAAG+TGG | - | tig0024129:28398-28417 | None:intergenic | 25.0% |
| AAGGCAATTCCTAATAAGAT+TGG | - | tig0024129:26543-26562 | None:intergenic | 30.0% | |
| TCTTATTAGGAATTGCCTTA+AGG | + | tig0024129:26544-26563 | Msa1414490:CDS | 30.0% | |
| GGTTTCAAACTATTGAGTAT+TGG | + | tig0024129:26743-26762 | Msa1414490:intron | 30.0% | |
| GCCATAATGTTAACTTTCTT+AGG | + | tig0024129:26894-26913 | Msa1414490:intron | 30.0% | |
| CCCTAAGAAAGTTAACATTA+TGG | - | tig0024129:26898-26917 | None:intergenic | 30.0% | |
| ! | CAAGCTTTGTAGAAACAAAT+GGG | - | tig0024129:26935-26954 | None:intergenic | 30.0% |
| ! | TCAAGCTTTGTAGAAACAAA+TGG | - | tig0024129:26936-26955 | None:intergenic | 30.0% |
| !! | ATTTGTTTCTACAAAGCTTG+AGG | + | tig0024129:26935-26954 | Msa1414490:intron | 30.0% |
| !! | TTTGTTTCTACAAAGCTTGA+GGG | + | tig0024129:26936-26955 | Msa1414490:intron | 30.0% |
| CTGTAGTATCTTGTCTATAT+CGG | + | tig0024129:27158-27177 | Msa1414490:intron | 30.0% | |
| GAAGATAAAAATGCTAGCTA+GGG | - | tig0024129:27434-27453 | None:intergenic | 30.0% | |
| AGAAGATAAAAATGCTAGCT+AGG | - | tig0024129:27435-27454 | None:intergenic | 30.0% | |
| ! | GAGAGGTTATTCTAAAGAAA+TGG | + | tig0024129:27672-27691 | Msa1414490:intron | 30.0% |
| AAAGGATTATCTCAGAACAT+GGG | - | tig0024129:27827-27846 | None:intergenic | 30.0% | |
| AAAAGGATTATCTCAGAACA+TGG | - | tig0024129:27828-27847 | None:intergenic | 30.0% | |
| ! | GATAATCCTTTTCTGTTTAG+TGG | + | tig0024129:27836-27855 | Msa1414490:intron | 30.0% |
| !!! | CTTTTAATCGGTTTGAAGTT+TGG | - | tig0024129:28168-28187 | None:intergenic | 30.0% |
| ! | AAATGACACTTACGTGATTT+TGG | + | tig0024129:28269-28288 | Msa1414490:intron | 30.0% |
| ! | ATCTTAATCAGTTTGAGGTT+TGG | - | tig0024129:28331-28350 | None:intergenic | 30.0% |
| ! | CCAATTTGAAGTAAAACTCA+AGG | - | tig0024129:28367-28386 | None:intergenic | 30.0% |
| ! | CCTTGAGTTTTACTTCAAAT+TGG | + | tig0024129:28364-28383 | Msa1414490:intron | 30.0% |
| !!! | TACAAGTGTACCTCTTTTTT+TGG | - | tig0024129:28551-28570 | None:intergenic | 30.0% |
| ! | TAAAAGAGGTACACTTGTTA+AGG | + | tig0024129:28569-28588 | Msa1414490:intron | 30.0% |
| TTAAGGATCTAAGGAGAAAA+GGG | + | tig0024129:28586-28605 | Msa1414490:intron | 30.0% | |
| AAGGCAATTCCTAATAAGAT+TGG | - | tig0024129:26543-26562 | None:intergenic | 30.0% | |
| TCTTATTAGGAATTGCCTTA+AGG | + | tig0024129:26544-26563 | Msa1414490:CDS | 30.0% | |
| GGTTTCAAACTATTGAGTAT+TGG | + | tig0024129:26743-26762 | Msa1414490:intron | 30.0% | |
| GCCATAATGTTAACTTTCTT+AGG | + | tig0024129:26894-26913 | Msa1414490:intron | 30.0% | |
| CCCTAAGAAAGTTAACATTA+TGG | - | tig0024129:26898-26917 | None:intergenic | 30.0% | |
| ! | CAAGCTTTGTAGAAACAAAT+GGG | - | tig0024129:26935-26954 | None:intergenic | 30.0% |
| ! | TCAAGCTTTGTAGAAACAAA+TGG | - | tig0024129:26936-26955 | None:intergenic | 30.0% |
| !! | ATTTGTTTCTACAAAGCTTG+AGG | + | tig0024129:26935-26954 | Msa1414490:intron | 30.0% |
| !! | TTTGTTTCTACAAAGCTTGA+GGG | + | tig0024129:26936-26955 | Msa1414490:intron | 30.0% |
| CTGTAGTATCTTGTCTATAT+CGG | + | tig0024129:27158-27177 | Msa1414490:intron | 30.0% | |
| GAAGATAAAAATGCTAGCTA+GGG | - | tig0024129:27434-27453 | None:intergenic | 30.0% | |
| AGAAGATAAAAATGCTAGCT+AGG | - | tig0024129:27435-27454 | None:intergenic | 30.0% | |
| ! | GAGAGGTTATTCTAAAGAAA+TGG | + | tig0024129:27672-27691 | Msa1414490:intron | 30.0% |
| AAAGGATTATCTCAGAACAT+GGG | - | tig0024129:27827-27846 | None:intergenic | 30.0% | |
| AAAAGGATTATCTCAGAACA+TGG | - | tig0024129:27828-27847 | None:intergenic | 30.0% | |
| ! | GATAATCCTTTTCTGTTTAG+TGG | + | tig0024129:27836-27855 | Msa1414490:intron | 30.0% |
| !!! | CTTTTAATCGGTTTGAAGTT+TGG | - | tig0024129:28168-28187 | None:intergenic | 30.0% |
| ! | AAATGACACTTACGTGATTT+TGG | + | tig0024129:28269-28288 | Msa1414490:intron | 30.0% |
| ! | ATCTTAATCAGTTTGAGGTT+TGG | - | tig0024129:28331-28350 | None:intergenic | 30.0% |
| ! | CCAATTTGAAGTAAAACTCA+AGG | - | tig0024129:28367-28386 | None:intergenic | 30.0% |
| ! | CCTTGAGTTTTACTTCAAAT+TGG | + | tig0024129:28364-28383 | Msa1414490:intron | 30.0% |
| !!! | TACAAGTGTACCTCTTTTTT+TGG | - | tig0024129:28551-28570 | None:intergenic | 30.0% |
| ! | TAAAAGAGGTACACTTGTTA+AGG | + | tig0024129:28569-28588 | Msa1414490:intron | 30.0% |
| TTAAGGATCTAAGGAGAAAA+GGG | + | tig0024129:28586-28605 | Msa1414490:intron | 30.0% | |
| GTAACGAAAACAAGTGTAAG+AGG | + | tig0024129:26399-26418 | Msa1414490:five_prime_UTR | 35.0% | |
| CGTATCAGATAATCGATCAA+TGG | + | tig0024129:26445-26464 | Msa1414490:exon | 35.0% | |
| ! | AATAAGATTGGCTGTCAAGT+TGG | - | tig0024129:26531-26550 | None:intergenic | 35.0% |
| ACTTGACAGCCAATCTTATT+AGG | + | tig0024129:26531-26550 | Msa1414490:CDS | 35.0% | |
| !! | GAGAGAATTTGAGTTTTGTG+AGG | - | tig0024129:26572-26591 | None:intergenic | 35.0% |
| AGAAGAAGAGAGAAAGAAGA+GGG | - | tig0024129:26667-26686 | None:intergenic | 35.0% | |
| TAGAAGAAGAGAGAAAGAAG+AGG | - | tig0024129:26668-26687 | None:intergenic | 35.0% | |
| GCTTAAACAATGTCTCTTGT+TGG | + | tig0024129:26854-26873 | Msa1414490:intron | 35.0% | |
| TCTTGTTGGAACTTGAGTTT+GGG | + | tig0024129:26868-26887 | Msa1414490:intron | 35.0% | |
| !! | TTTTAGATTGAAGGTGTGAG+TGG | + | tig0024129:27037-27056 | Msa1414490:intron | 35.0% |
| !! | AACCACATATTTTGTTGTGC+CGG | - | tig0024129:27089-27108 | None:intergenic | 35.0% |
| CATCTCAAAATTTGTCCCAT+AGG | - | tig0024129:27203-27222 | None:intergenic | 35.0% | |
| ! | ACTACTTTGGAGAGAAATTG+AGG | + | tig0024129:27231-27250 | Msa1414490:intron | 35.0% |
| ! | CTACTTTGGAGAGAAATTGA+GGG | + | tig0024129:27232-27251 | Msa1414490:intron | 35.0% |
| AATACTCCACTTCACTTCAT+CGG | - | tig0024129:27340-27359 | None:intergenic | 35.0% | |
| ! | TTCTAAAGAAATGGTGAGTG+TGG | + | tig0024129:27681-27700 | Msa1414490:intron | 35.0% |
| TCATTGCCACTAAACAGAAA+AGG | - | tig0024129:27845-27864 | None:intergenic | 35.0% | |
| AGAAATGAAATGGAAACGCA+GGG | - | tig0024129:27883-27902 | None:intergenic | 35.0% | |
| TCGACAAATAGATGTTACAC+AGG | - | tig0024129:28040-28059 | None:intergenic | 35.0% | |
| ACATTCAACTCACACTTACA+TGG | + | tig0024129:28099-28118 | Msa1414490:intron | 35.0% | |
| ! | AACTCACACTTACATGGTTT+TGG | + | tig0024129:28105-28124 | Msa1414490:intron | 35.0% |
| ACTGTGTGAAACTGTGTTTA+AGG | - | tig0024129:28501-28520 | None:intergenic | 35.0% | |
| CACTTAGAAGCCAAAAAAAG+AGG | + | tig0024129:28538-28557 | Msa1414490:intron | 35.0% | |
| ! | AAGAGGTACACTTGTAAAAG+AGG | + | tig0024129:28555-28574 | Msa1414490:intron | 35.0% |
| ! | GTACACTTGTTAAGGATCTA+AGG | + | tig0024129:28577-28596 | Msa1414490:intron | 35.0% |
| GTTAAGGATCTAAGGAGAAA+AGG | + | tig0024129:28585-28604 | Msa1414490:intron | 35.0% | |
| GTAACGAAAACAAGTGTAAG+AGG | + | tig0024129:26399-26418 | Msa1414490:five_prime_UTR | 35.0% | |
| CGTATCAGATAATCGATCAA+TGG | + | tig0024129:26445-26464 | Msa1414490:exon | 35.0% | |
| ! | AATAAGATTGGCTGTCAAGT+TGG | - | tig0024129:26531-26550 | None:intergenic | 35.0% |
| ACTTGACAGCCAATCTTATT+AGG | + | tig0024129:26531-26550 | Msa1414490:CDS | 35.0% | |
| !! | GAGAGAATTTGAGTTTTGTG+AGG | - | tig0024129:26572-26591 | None:intergenic | 35.0% |
| AGAAGAAGAGAGAAAGAAGA+GGG | - | tig0024129:26667-26686 | None:intergenic | 35.0% | |
| TAGAAGAAGAGAGAAAGAAG+AGG | - | tig0024129:26668-26687 | None:intergenic | 35.0% | |
| GCTTAAACAATGTCTCTTGT+TGG | + | tig0024129:26854-26873 | Msa1414490:intron | 35.0% | |
| TCTTGTTGGAACTTGAGTTT+GGG | + | tig0024129:26868-26887 | Msa1414490:intron | 35.0% | |
| !! | TTTTAGATTGAAGGTGTGAG+TGG | + | tig0024129:27037-27056 | Msa1414490:intron | 35.0% |
| !! | AACCACATATTTTGTTGTGC+CGG | - | tig0024129:27089-27108 | None:intergenic | 35.0% |
| CATCTCAAAATTTGTCCCAT+AGG | - | tig0024129:27203-27222 | None:intergenic | 35.0% | |
| ! | ACTACTTTGGAGAGAAATTG+AGG | + | tig0024129:27231-27250 | Msa1414490:intron | 35.0% |
| ! | CTACTTTGGAGAGAAATTGA+GGG | + | tig0024129:27232-27251 | Msa1414490:intron | 35.0% |
| AATACTCCACTTCACTTCAT+CGG | - | tig0024129:27340-27359 | None:intergenic | 35.0% | |
| ! | TTCTAAAGAAATGGTGAGTG+TGG | + | tig0024129:27681-27700 | Msa1414490:intron | 35.0% |
| TCATTGCCACTAAACAGAAA+AGG | - | tig0024129:27845-27864 | None:intergenic | 35.0% | |
| AGAAATGAAATGGAAACGCA+GGG | - | tig0024129:27883-27902 | None:intergenic | 35.0% | |
| TCGACAAATAGATGTTACAC+AGG | - | tig0024129:28040-28059 | None:intergenic | 35.0% | |
| ACATTCAACTCACACTTACA+TGG | + | tig0024129:28099-28118 | Msa1414490:intron | 35.0% | |
| ! | AACTCACACTTACATGGTTT+TGG | + | tig0024129:28105-28124 | Msa1414490:intron | 35.0% |
| ACTGTGTGAAACTGTGTTTA+AGG | - | tig0024129:28501-28520 | None:intergenic | 35.0% | |
| CACTTAGAAGCCAAAAAAAG+AGG | + | tig0024129:28538-28557 | Msa1414490:intron | 35.0% | |
| ! | AAGAGGTACACTTGTAAAAG+AGG | + | tig0024129:28555-28574 | Msa1414490:intron | 35.0% |
| ! | GTACACTTGTTAAGGATCTA+AGG | + | tig0024129:28577-28596 | Msa1414490:intron | 35.0% |
| GTTAAGGATCTAAGGAGAAA+AGG | + | tig0024129:28585-28604 | Msa1414490:intron | 35.0% | |
| !! | GAGTTTTGTGAGGTTCCTTA+AGG | - | tig0024129:26562-26581 | None:intergenic | 40.0% |
| AAGAAGAGAGAAAGAAGAGG+GGG | - | tig0024129:26665-26684 | None:intergenic | 40.0% | |
| GAAGAAGAGAGAAAGAAGAG+GGG | - | tig0024129:26666-26685 | None:intergenic | 40.0% | |
| TTTACCCTTCCTTCATCACT+TGG | + | tig0024129:26704-26723 | Msa1414490:intron | 40.0% | |
| TCAACCAAGTGATGAAGGAA+GGG | - | tig0024129:26711-26730 | None:intergenic | 40.0% | |
| CTCTTGTTGGAACTTGAGTT+TGG | + | tig0024129:26867-26886 | Msa1414490:intron | 40.0% | |
| GCTTTGTAGAAACAAATGGG+TGG | - | tig0024129:26932-26951 | None:intergenic | 40.0% | |
| ! | TATCGGTGCTTCATAGATAG+AGG | + | tig0024129:27175-27194 | Msa1414490:intron | 40.0% |
| ! | ATCGGTGCTTCATAGATAGA+GGG | + | tig0024129:27176-27195 | Msa1414490:intron | 40.0% |
| TTCATAGATAGAGGGACCTA+TGG | + | tig0024129:27184-27203 | Msa1414490:intron | 40.0% | |
| TCATAGATAGAGGGACCTAT+GGG | + | tig0024129:27185-27204 | Msa1414490:intron | 40.0% | |
| AAGAAACCGATGAAGTGAAG+TGG | + | tig0024129:27331-27350 | Msa1414490:intron | 40.0% | |
| !! | AATTTCTGGTGCCACAAGTT+AGG | - | tig0024129:27742-27761 | None:intergenic | 40.0% |
| !! | GCGATGAGTACTGAAATTTC+TGG | - | tig0024129:27756-27775 | None:intergenic | 40.0% |
| TTCAGTACTCATCGCTACAA+TGG | + | tig0024129:27761-27780 | Msa1414490:intron | 40.0% | |
| TACTCATCGCTACAATGGTT+AGG | + | tig0024129:27766-27785 | Msa1414490:intron | 40.0% | |
| CAGAAATGAAATGGAAACGC+AGG | - | tig0024129:27884-27903 | None:intergenic | 40.0% | |
| AGGGTAACTTCACATTACAG+TGG | - | tig0024129:28234-28253 | None:intergenic | 40.0% | |
| GGCGTTAAATGCAAATCATC+AGG | - | tig0024129:28688-28707 | None:intergenic | 40.0% | |
| !! | GAGTTTTGTGAGGTTCCTTA+AGG | - | tig0024129:26562-26581 | None:intergenic | 40.0% |
| AAGAAGAGAGAAAGAAGAGG+GGG | - | tig0024129:26665-26684 | None:intergenic | 40.0% | |
| GAAGAAGAGAGAAAGAAGAG+GGG | - | tig0024129:26666-26685 | None:intergenic | 40.0% | |
| TTTACCCTTCCTTCATCACT+TGG | + | tig0024129:26704-26723 | Msa1414490:intron | 40.0% | |
| TCAACCAAGTGATGAAGGAA+GGG | - | tig0024129:26711-26730 | None:intergenic | 40.0% | |
| CTCTTGTTGGAACTTGAGTT+TGG | + | tig0024129:26867-26886 | Msa1414490:intron | 40.0% | |
| GCTTTGTAGAAACAAATGGG+TGG | - | tig0024129:26932-26951 | None:intergenic | 40.0% | |
| ! | TATCGGTGCTTCATAGATAG+AGG | + | tig0024129:27175-27194 | Msa1414490:intron | 40.0% |
| ! | ATCGGTGCTTCATAGATAGA+GGG | + | tig0024129:27176-27195 | Msa1414490:intron | 40.0% |
| TTCATAGATAGAGGGACCTA+TGG | + | tig0024129:27184-27203 | Msa1414490:intron | 40.0% | |
| TCATAGATAGAGGGACCTAT+GGG | + | tig0024129:27185-27204 | Msa1414490:intron | 40.0% | |
| AAGAAACCGATGAAGTGAAG+TGG | + | tig0024129:27331-27350 | Msa1414490:intron | 40.0% | |
| !! | AATTTCTGGTGCCACAAGTT+AGG | - | tig0024129:27742-27761 | None:intergenic | 40.0% |
| !! | GCGATGAGTACTGAAATTTC+TGG | - | tig0024129:27756-27775 | None:intergenic | 40.0% |
| TTCAGTACTCATCGCTACAA+TGG | + | tig0024129:27761-27780 | Msa1414490:intron | 40.0% | |
| TACTCATCGCTACAATGGTT+AGG | + | tig0024129:27766-27785 | Msa1414490:intron | 40.0% | |
| CAGAAATGAAATGGAAACGC+AGG | - | tig0024129:27884-27903 | None:intergenic | 40.0% | |
| AGGGTAACTTCACATTACAG+TGG | - | tig0024129:28234-28253 | None:intergenic | 40.0% | |
| GGCGTTAAATGCAAATCATC+AGG | - | tig0024129:28688-28707 | None:intergenic | 40.0% | |
| GATAATCGATCAATGGCGTC+AGG | + | tig0024129:26452-26471 | Msa1414490:exon | 45.0% | |
| GCAGAGGAAAAGTAGCGATT+TGG | + | tig0024129:26474-26493 | Msa1414490:CDS | 45.0% | |
| TTCAGTACTTGCTTCCCACA+TGG | + | tig0024129:26609-26628 | Msa1414490:CDS | 45.0% | |
| GGAATACTGTCGATCCATGT+GGG | - | tig0024129:26626-26645 | None:intergenic | 45.0% | |
| CACATGGATCGACAGTATTC+CGG | + | tig0024129:26625-26644 | Msa1414490:CDS | 45.0% | |
| GTCAACCAAGTGATGAAGGA+AGG | - | tig0024129:26712-26731 | None:intergenic | 45.0% | |
| CTAGGTCAACCAAGTGATGA+AGG | - | tig0024129:26716-26735 | None:intergenic | 45.0% | |
| CTTCATCACTTGGTTGACCT+AGG | + | tig0024129:26714-26733 | Msa1414490:intron | 45.0% | |
| ACTTGGTTGACCTAGGTCTT+GGG | + | tig0024129:26721-26740 | Msa1414490:intron | 45.0% | |
| ! | AGTTTGAAACCCCAAGACCT+AGG | - | tig0024129:26734-26753 | None:intergenic | 45.0% |
| !! | CTATTGAGTATTGGAGCGCT+TGG | + | tig0024129:26752-26771 | Msa1414490:intron | 45.0% |
| ! | ATTGGAGCGCTTGGATTAAC+CGG | + | tig0024129:26761-26780 | Msa1414490:intron | 45.0% |
| ! | TTTCTAAGAACTCGGCATCC+GGG | - | tig0024129:26794-26813 | None:intergenic | 45.0% |
| ! | CTTTCTAAGAACTCGGCATC+CGG | - | tig0024129:26795-26814 | None:intergenic | 45.0% |
| GAGTGGTGTCTAACATGTGT+TGG | + | tig0024129:27054-27073 | Msa1414490:intron | 45.0% | |
| CACCGGCACAACAAAATATG+TGG | + | tig0024129:27084-27103 | Msa1414490:intron | 45.0% | |
| AGAAATGGTGAGTGTGGAGT+AGG | + | tig0024129:27687-27706 | Msa1414490:intron | 45.0% | |
| TGTGGAGTAGGAACTAGGAA+TGG | + | tig0024129:27699-27718 | Msa1414490:intron | 45.0% | |
| TGAAATGGAAACGCAGGGAA+GGG | - | tig0024129:27878-27897 | None:intergenic | 45.0% | |
| ATGAAATGGAAACGCAGGGA+AGG | - | tig0024129:27879-27898 | None:intergenic | 45.0% | |
| AGGATCTAAGGAGAAAAGGG+TGG | + | tig0024129:28589-28608 | Msa1414490:intron | 45.0% | |
| !! | CTCTGGGATGTCTGTATGAA+TGG | - | tig0024129:28778-28797 | None:intergenic | 45.0% |
| CATTCATACAGACATCCCAG+AGG | + | tig0024129:28776-28795 | Msa1414490:intron | 45.0% | |
| GATAATCGATCAATGGCGTC+AGG | + | tig0024129:26452-26471 | Msa1414490:exon | 45.0% | |
| GCAGAGGAAAAGTAGCGATT+TGG | + | tig0024129:26474-26493 | Msa1414490:CDS | 45.0% | |
| TTCAGTACTTGCTTCCCACA+TGG | + | tig0024129:26609-26628 | Msa1414490:CDS | 45.0% | |
| GGAATACTGTCGATCCATGT+GGG | - | tig0024129:26626-26645 | None:intergenic | 45.0% | |
| CACATGGATCGACAGTATTC+CGG | + | tig0024129:26625-26644 | Msa1414490:CDS | 45.0% | |
| GTCAACCAAGTGATGAAGGA+AGG | - | tig0024129:26712-26731 | None:intergenic | 45.0% | |
| CTAGGTCAACCAAGTGATGA+AGG | - | tig0024129:26716-26735 | None:intergenic | 45.0% | |
| CTTCATCACTTGGTTGACCT+AGG | + | tig0024129:26714-26733 | Msa1414490:intron | 45.0% | |
| ACTTGGTTGACCTAGGTCTT+GGG | + | tig0024129:26721-26740 | Msa1414490:intron | 45.0% | |
| ! | AGTTTGAAACCCCAAGACCT+AGG | - | tig0024129:26734-26753 | None:intergenic | 45.0% |
| !! | CTATTGAGTATTGGAGCGCT+TGG | + | tig0024129:26752-26771 | Msa1414490:intron | 45.0% |
| ! | ATTGGAGCGCTTGGATTAAC+CGG | + | tig0024129:26761-26780 | Msa1414490:intron | 45.0% |
| ! | TTTCTAAGAACTCGGCATCC+GGG | - | tig0024129:26794-26813 | None:intergenic | 45.0% |
| ! | CTTTCTAAGAACTCGGCATC+CGG | - | tig0024129:26795-26814 | None:intergenic | 45.0% |
| GAGTGGTGTCTAACATGTGT+TGG | + | tig0024129:27054-27073 | Msa1414490:intron | 45.0% | |
| CACCGGCACAACAAAATATG+TGG | + | tig0024129:27084-27103 | Msa1414490:intron | 45.0% | |
| AGAAATGGTGAGTGTGGAGT+AGG | + | tig0024129:27687-27706 | Msa1414490:intron | 45.0% | |
| TGTGGAGTAGGAACTAGGAA+TGG | + | tig0024129:27699-27718 | Msa1414490:intron | 45.0% | |
| TGAAATGGAAACGCAGGGAA+GGG | - | tig0024129:27878-27897 | None:intergenic | 45.0% | |
| ATGAAATGGAAACGCAGGGA+AGG | - | tig0024129:27879-27898 | None:intergenic | 45.0% | |
| AGGATCTAAGGAGAAAAGGG+TGG | + | tig0024129:28589-28608 | Msa1414490:intron | 45.0% | |
| !! | CTCTGGGATGTCTGTATGAA+TGG | - | tig0024129:28778-28797 | None:intergenic | 45.0% |
| CATTCATACAGACATCCCAG+AGG | + | tig0024129:28776-28795 | Msa1414490:intron | 45.0% | |
| ! | TAGCGATTTGGAGAGCAGCA+GGG | + | tig0024129:26486-26505 | Msa1414490:CDS | 50.0% |
| CGGAATACTGTCGATCCATG+TGG | - | tig0024129:26627-26646 | None:intergenic | 50.0% | |
| ! | GGGGGTCTTACTGAGTTTTC+CGG | - | tig0024129:26647-26666 | None:intergenic | 50.0% |
| CACTTGGTTGACCTAGGTCT+TGG | + | tig0024129:26720-26739 | Msa1414490:intron | 50.0% | |
| CTTGGTTGACCTAGGTCTTG+GGG | + | tig0024129:26722-26741 | Msa1414490:intron | 50.0% | |
| ! | TTCTAAGAACTCGGCATCCG+GGG | - | tig0024129:26793-26812 | None:intergenic | 50.0% |
| GTGAGTGTGGAGTAGGAACT+AGG | + | tig0024129:27694-27713 | Msa1414490:intron | 50.0% | |
| GACGTCGTCTTGATTCCTCT+GGG | - | tig0024129:28794-28813 | None:intergenic | 50.0% | |
| ! | TAGCGATTTGGAGAGCAGCA+GGG | + | tig0024129:26486-26505 | Msa1414490:CDS | 50.0% |
| CGGAATACTGTCGATCCATG+TGG | - | tig0024129:26627-26646 | None:intergenic | 50.0% | |
| ! | GGGGGTCTTACTGAGTTTTC+CGG | - | tig0024129:26647-26666 | None:intergenic | 50.0% |
| CACTTGGTTGACCTAGGTCT+TGG | + | tig0024129:26720-26739 | Msa1414490:intron | 50.0% | |
| CTTGGTTGACCTAGGTCTTG+GGG | + | tig0024129:26722-26741 | Msa1414490:intron | 50.0% | |
| ! | TTCTAAGAACTCGGCATCCG+GGG | - | tig0024129:26793-26812 | None:intergenic | 50.0% |
| GTGAGTGTGGAGTAGGAACT+AGG | + | tig0024129:27694-27713 | Msa1414490:intron | 50.0% | |
| GACGTCGTCTTGATTCCTCT+GGG | - | tig0024129:28794-28813 | None:intergenic | 50.0% | |
| ! | GTAGCGATTTGGAGAGCAGC+AGG | + | tig0024129:26485-26504 | Msa1414490:CDS | 55.0% |
| GGATTAACCGGTCCTTTCCC+CGG | + | tig0024129:26773-26792 | Msa1414490:intron | 55.0% | |
| ! | CATGTGTTGGTGTGCGACAC+CGG | + | tig0024129:27067-27086 | Msa1414490:intron | 55.0% |
| CGACGTCGTCTTGATTCCTC+TGG | - | tig0024129:28795-28814 | None:intergenic | 55.0% | |
| ! | GTAGCGATTTGGAGAGCAGC+AGG | + | tig0024129:26485-26504 | Msa1414490:CDS | 55.0% |
| GGATTAACCGGTCCTTTCCC+CGG | + | tig0024129:26773-26792 | Msa1414490:intron | 55.0% | |
| ! | CATGTGTTGGTGTGCGACAC+CGG | + | tig0024129:27067-27086 | Msa1414490:intron | 55.0% |
| CGACGTCGTCTTGATTCCTC+TGG | - | tig0024129:28795-28814 | None:intergenic | 55.0% | |
| CGATCAATGGCGTCAGGCAG+AGG | + | tig0024129:26458-26477 | Msa1414490:exon | 60.0% | |
| AGAACTCGGCATCCGGGGAA+AGG | - | tig0024129:26788-26807 | None:intergenic | 60.0% | |
| ! | AACGCAGGGAAGGGTGTGAG+TGG | - | tig0024129:27869-27888 | None:intergenic | 60.0% |
| CGATCAATGGCGTCAGGCAG+AGG | + | tig0024129:26458-26477 | Msa1414490:exon | 60.0% | |
| AGAACTCGGCATCCGGGGAA+AGG | - | tig0024129:26788-26807 | None:intergenic | 60.0% | |
| ! | AACGCAGGGAAGGGTGTGAG+TGG | - | tig0024129:27869-27888 | None:intergenic | 60.0% |
| TCGGCATCCGGGGAAAGGAC+CGG | - | tig0024129:26783-26802 | None:intergenic | 65.0% | |
| TCGGCATCCGGGGAAAGGAC+CGG | - | tig0024129:26783-26802 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024129 | gene | 26388 | 28831 | 26388 | ID=Msa1414490;Name=Msa1414490 |
| tig0024129 | mRNA | 26388 | 28831 | 26388 | ID=Msa1414490-mRNA-1;Parent=Msa1414490;Name=Msa1414490-mRNA-1;_AED=0.18;_eAED=0.30;_QI=76|0|0.5|1|1|1|2|0|78 |
| tig0024129 | exon | 26388 | 26655 | 26388 | ID=Msa1414490-mRNA-1:exon:21845;Parent=Msa1414490-mRNA-1 |
| tig0024129 | exon | 28787 | 28831 | 28787 | ID=Msa1414490-mRNA-1:exon:21846;Parent=Msa1414490-mRNA-1 |
| tig0024129 | five_prime_UTR | 26388 | 26463 | 26388 | ID=Msa1414490-mRNA-1:five_prime_utr;Parent=Msa1414490-mRNA-1 |
| tig0024129 | CDS | 26464 | 26655 | 26464 | ID=Msa1414490-mRNA-1:cds;Parent=Msa1414490-mRNA-1 |
| tig0024129 | CDS | 28787 | 28831 | 28787 | ID=Msa1414490-mRNA-1:cds;Parent=Msa1414490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
