AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0763830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0763830 MtrunA17_Chr5g0413801 61.523 512 147 9 83 583 88 560 3.85e-174 505
Msa0763830 MtrunA17_Chr5g0413801 98.352 182 3 0 1 182 66 247 5.84e-120 366
Msa0763830 MtrunA17_Chr8g0364941 91.209 182 16 0 1 182 69 250 1.07e-111 343
Msa0763830 MtrunA17_Chr8g0364941 38.536 519 213 16 83 583 91 521 2.07e-78 257
Msa0763830 MtrunA17_Chr6g0451131 69.271 192 49 2 1 182 66 257 1.31e-80 264
Msa0763830 MtrunA17_Chr6g0451131 30.623 369 200 16 83 428 88 423 2.91e-22 100
Msa0763830 MtrunA17_Chr2g0315511 60.674 178 68 2 1 177 62 238 1.59e-63 216
Msa0763830 MtrunA17_Chr8g0359721 64.000 125 44 1 53 177 24 147 1.01e-47 164
Msa0763830 MtrunA17_Chr8g0364901 39.773 176 102 3 5 179 31 203 2.20e-31 125
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0763830 AT1G70280.1 83.516 182 30 0 1 182 1 182 6.53e-104 321
Msa0763830 AT1G70280.1 31.481 378 191 14 83 443 23 349 3.45e-31 127
Msa0763830 AT1G70280.2 83.516 182 30 0 1 182 63 244 5.25e-103 321
Msa0763830 AT1G70280.2 32.275 378 188 16 83 443 85 411 9.00e-31 126
Msa0763830 AT1G23880.2 81.868 182 33 0 1 182 1 182 7.47e-102 315
Msa0763830 AT1G23880.2 29.630 378 202 14 83 443 23 353 3.57e-24 105
Msa0763830 AT1G23880.1 81.868 182 33 0 1 182 125 306 5.86e-101 317
Msa0763830 AT1G23880.1 45.865 133 64 4 318 443 346 477 7.00e-24 106
Msa0763830 AT5G14890.1 68.208 173 50 2 1 172 71 239 3.44e-72 239
Msa0763830 AT5G14890.1 27.761 335 189 12 92 416 103 394 3.08e-16 82.0
Msa0763830 AT3G14860.2 52.968 219 102 1 1 219 70 287 1.96e-66 224
Msa0763830 AT3G14860.1 59.890 182 72 1 1 182 70 250 2.41e-66 224
Msa0763830 AT1G23890.1 48.837 172 83 4 2 171 23 191 1.80e-41 150
Msa0763830 AT1G23890.2 48.837 172 83 4 2 171 23 191 2.05e-40 152

Find 167 sgRNAs with CRISPR-Local

Find 535 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGCATTTATTTGCCTTTC+AGG 0.119350 5_2:-23236527 None:intergenic
TTCTTAGGGGTTGGAGTTCT+TGG 0.127961 5_2:-23236605 None:intergenic
CACCAGGGCGACTGAAAATT+TGG 0.170155 5_2:-23237288 None:intergenic
AAGGCAAGATCAAGAAATTT+TGG 0.177285 5_2:+23237340 Msa0763830:three_prime_UTR
GAACATTGAGCATAATTTAA+AGG 0.196182 5_2:+23237321 Msa0763830:three_prime_UTR
TAATGGGGAGCTTCTGATTC+TGG 0.211291 5_2:+23229966 Msa0763830:CDS
CCACATATGTTCGACATTTC+CGG 0.221850 5_2:-23231763 None:intergenic
CCACATATGTTCGACATTTC+CGG 0.221850 5_2:-23233066 None:intergenic
TAGTGGAAATAATGGGTTTC+AGG 0.231590 5_2:+23236456 Msa0763830:CDS
ATTAGGAAAATTAGCGATTC+AGG 0.250879 5_2:+23230278 Msa0763830:CDS
GCAGATCCTGCCACAAGTTT+TGG 0.290153 5_2:-23230137 None:intergenic
CAAGGTAGAGCGCTCTATTA+TGG 0.290949 5_2:+23236677 Msa0763830:CDS
TCAGGGGTTACGACAATTGC+TGG 0.292338 5_2:+23230845 Msa0763830:intron
GTGAACTCGCAGTTGATATA+AGG 0.293555 5_2:+23231958 Msa0763830:CDS
GTGAACTCGCAGTTGATATA+AGG 0.293555 5_2:+23233261 Msa0763830:CDS
TTATTTGCCTTTCAGGTTGA+TGG 0.296462 5_2:-23236520 None:intergenic
TGACAGATTTCAACGGCTTT+TGG 0.297398 5_2:-23236337 None:intergenic
TGTTGCAGATATTATGAATA+TGG 0.304153 5_2:+23230253 Msa0763830:CDS
GAAACCAATGAGATAGTATT+TGG 0.308736 5_2:+23236998 Msa0763830:CDS
GGATCTGCTGAAGGATATTC+TGG 0.315805 5_2:+23230152 Msa0763830:CDS
CTTTCAGGTTGATGGAATAA+AGG 0.334420 5_2:-23236512 None:intergenic
CAGAAACTTATTTGTTTCTT+CGG 0.337333 5_2:+23237260 Msa0763830:three_prime_UTR
GTCTGTAGTTATCAAGCCTT+TGG 0.338039 5_2:+23237048 Msa0763830:CDS
GCAGTTGAGGTGTTGTCTAA+TGG 0.342329 5_2:+23229949 Msa0763830:CDS
TTGATTTCACCCTCCCCTAT+TGG 0.343493 5_2:-23237175 None:intergenic
GTTATCAAGCCTTTGGATTA+CGG 0.356811 5_2:+23237055 Msa0763830:CDS
GAAGGAGGCTCGTCTTCATT+TGG 0.360866 5_2:-23236575 None:intergenic
CTATCATACCATTGCCTGTC+TGG 0.365362 5_2:+23232911 Msa0763830:CDS
TCTTAGGGGTTGGAGTTCTT+GGG 0.370584 5_2:-23236604 None:intergenic
GGCCTCAGTAGTGGAAATAA+TGG 0.375297 5_2:+23236448 Msa0763830:CDS
GGGAAGCTTCTTACCAATGC+TGG 0.376253 5_2:+23236425 Msa0763830:CDS
GACTACTGCTTTGAGGTTGA+TGG 0.382748 5_2:+23231980 Msa0763830:CDS
GACTACTGCTTTGAGGTTGA+TGG 0.382748 5_2:+23233283 Msa0763830:CDS
CGATGGTTAACAAGCTTTGC+CGG 0.383127 5_2:+23231744 Msa0763830:CDS
CGATGGTTAACAAGCTTTGC+CGG 0.383127 5_2:+23233047 Msa0763830:CDS
TAAGATTGCAGTCTCAGTTT+TGG 0.385442 5_2:+23232018 Msa0763830:CDS
ATATTATGAATATGGCAATT+AGG 0.393436 5_2:+23230261 Msa0763830:CDS
GTTCCCTACTTGTCATTGAC+AGG 0.393882 5_2:+23230963 Msa0763830:CDS
GGAGTTCTTGGGTCAATAGA+AGG 0.407998 5_2:-23236593 None:intergenic
ATCAAATCACCAACAGGGTT+GGG 0.414345 5_2:-23231720 None:intergenic
ATCAAATCACCAACAGGGTT+GGG 0.414345 5_2:-23233023 None:intergenic
CATCGTATCAAATCACCAAC+AGG 0.414704 5_2:-23231726 None:intergenic
CATCGTATCAAATCACCAAC+AGG 0.414704 5_2:-23233029 None:intergenic
GAAGGTCTCTTTGCATCCAT+TGG 0.415306 5_2:+23236404 Msa0763830:CDS
GGGAAAGTTAAGCCGTGGAG+GGG 0.417242 5_2:+23230868 Msa0763830:CDS
CAGTTGAGGTGTTGTCTAAT+GGG 0.419303 5_2:+23229950 Msa0763830:CDS
GGAGCTTCTGATTCTGGATT+CGG 0.422081 5_2:+23229972 Msa0763830:CDS
CTGTACCTGCTTTCACCAAA+TGG 0.422982 5_2:+23229389 Msa0763830:five_prime_UTR
GGATATTCTGGACACGTTGA+TGG 0.428902 5_2:+23230164 Msa0763830:CDS
TGCACCAAATACTATCTCAT+TGG 0.430196 5_2:-23237002 None:intergenic
CTTTGAAATTCATAGCTTTG+CGG 0.434942 5_2:-23236485 None:intergenic
AAATCCACTTTCGTATTGAT+AGG 0.438506 5_2:-23231032 None:intergenic
GACTTTGATGTGGTTTATGT+TGG 0.439630 5_2:+23230932 Msa0763830:CDS
ATATAAGGACTACTGCTTTG+AGG 0.442572 5_2:+23231973 Msa0763830:CDS
ATATAAGGACTACTGCTTTG+AGG 0.442572 5_2:+23233276 Msa0763830:CDS
TGTTGAATGACAGCGATTGC+TGG 0.443118 5_2:+23229847 Msa0763830:intron
CATCAACAGTAATCCCCTTC+GGG 0.446147 5_2:-23230214 None:intergenic
TAAAACATGTGTACAATGGA+TGG 0.452424 5_2:+23236738 Msa0763830:CDS
GGAAAGTTAAGCCGTGGAGG+GGG 0.455551 5_2:+23230869 Msa0763830:CDS
TGCGGTAATGAATCTCCAAT+AGG 0.458535 5_2:+23237160 Msa0763830:three_prime_UTR
CAGGGGTTACGACAATTGCT+GGG 0.462604 5_2:+23230846 Msa0763830:intron
TCATCAACAGTAATCCCCTT+CGG 0.464047 5_2:-23230215 None:intergenic
AGTGTTTGGATATCTCTGTT+AGG 0.464446 5_2:-23232887 None:intergenic
CAGGTTGATGGAATAAAGGT+TGG 0.464853 5_2:-23236508 None:intergenic
TTTAAGTGAGAACACCCATT+TGG 0.465712 5_2:-23229404 None:intergenic
GGAAGCTTCTTACCAATGCT+GGG 0.467300 5_2:+23236426 Msa0763830:CDS
ATTTGGTGCAGTGCAGGAAC+AGG 0.468187 5_2:+23237015 Msa0763830:CDS
GACAACACCTCAACTGCATA+AGG 0.472947 5_2:-23229943 None:intergenic
CACTACTGAGGCCCCAGCAT+TGG 0.480624 5_2:-23236438 None:intergenic
GGTGAAATAGATGAGGATAA+TGG 0.481601 5_2:-23229250 None:intergenic
AATGTGGAAACTGTGTTTGA+TGG 0.487534 5_2:+23229901 Msa0763830:CDS
AATGGTATGATAGCAGTGTT+TGG 0.490046 5_2:-23232901 None:intergenic
GCCTCAGTAGTGGAAATAAT+GGG 0.496088 5_2:+23236449 Msa0763830:CDS
ATTGCAAATGTGCAGATAGC+AGG 0.500557 5_2:+23230114 Msa0763830:intron
GATAGTATTTGGTGCAGTGC+AGG 0.501838 5_2:+23237009 Msa0763830:CDS
AAGGTCTCTTTGCATCCATT+GGG 0.503206 5_2:+23236405 Msa0763830:CDS
GTGTTTGATGGAAGCAAGCT+TGG 0.504687 5_2:+23229913 Msa0763830:CDS
CTGAAAGGCAAATAAATGCT+TGG 0.505359 5_2:+23236528 Msa0763830:CDS
GAAAATTTAGCCTCTTCACT+TGG 0.506261 5_2:-23230905 None:intergenic
ATTACAAAACTTTCTTGCAC+AGG 0.511415 5_2:-23236551 None:intergenic
GCGGTAATGAATCTCCAATA+GGG 0.511658 5_2:+23237161 Msa0763830:three_prime_UTR
TACCAGGAATTTGCTTACAA+TGG 0.519847 5_2:+23231930 Msa0763830:intron
TACCAGGAATTTGCTTACAA+TGG 0.519847 5_2:+23233233 Msa0763830:intron
TTATAAGATTCGTCTTCTGA+TGG 0.521940 5_2:-23236374 None:intergenic
ATGTTCAATTTGTTTACACC+AGG 0.522047 5_2:-23237304 None:intergenic
CTGTATATACTCAGTACTTG+TGG 0.525525 5_2:-23237126 None:intergenic
TATCAAATCACCAACAGGGT+TGG 0.525719 5_2:-23231721 None:intergenic
TATCAAATCACCAACAGGGT+TGG 0.525719 5_2:-23233024 None:intergenic
TTCCCTACTTGTCATTGACA+GGG 0.526010 5_2:+23230964 Msa0763830:CDS
ATTTAAGCATGACCATCAAA+AGG 0.526506 5_2:-23237372 None:intergenic
TCGGTGTCTTTAATCATGAA+AGG 0.531257 5_2:-23236635 None:intergenic
CAATGCTGGGGCCTCAGTAG+TGG 0.531836 5_2:+23236439 Msa0763830:CDS
GGGGAAAGTTAAGCCGTGGA+GGG 0.532276 5_2:+23230867 Msa0763830:CDS
TGTACCTGCTTTCACCAAAT+GGG 0.534825 5_2:+23229390 Msa0763830:five_prime_UTR
AGCAGGCCAAAACTTGTGGC+AGG 0.539310 5_2:+23230131 Msa0763830:CDS
CTTTATTCCATCAACCTGAA+AGG 0.543035 5_2:+23236513 Msa0763830:CDS
TTGGATATCTCTGTTAGGCA+TGG 0.549365 5_2:-23232882 None:intergenic
GAATCTTATAAGCAAGAAGA+AGG 0.549566 5_2:+23236386 Msa0763830:CDS
CTTCACTTGGTCCATCGACA+TGG 0.549805 5_2:-23230892 None:intergenic
GTAGAGCGCTCTATTATGGA+TGG 0.553125 5_2:+23236681 Msa0763830:CDS
AACACCCATTTGGTGAAAGC+AGG 0.559076 5_2:-23229394 None:intergenic
TGTGCCTATCAATACGAAAG+TGG 0.563775 5_2:+23231028 Msa0763830:CDS
TCGTCTTCTGATGGAATCAA+AGG 0.565286 5_2:-23236365 None:intergenic
GTTGAATGACAGCGATTGCT+GGG 0.577934 5_2:+23229848 Msa0763830:intron
CCATTGGATCCCAACCCTGT+TGG 0.578356 5_2:+23231711 Msa0763830:CDS
CCATTGGATCCCAACCCTGT+TGG 0.578356 5_2:+23233014 Msa0763830:CDS
AGTGCAGGAACAGGATGAGA+AGG 0.580723 5_2:+23237024 Msa0763830:CDS
ATGGAAAATTAAGAGAGGCT+AGG 0.581572 5_2:+23230183 Msa0763830:CDS
CCACTAAAACATGTGTACAA+TGG 0.582133 5_2:+23236734 Msa0763830:CDS
CCAACAGGGTTGGGATCCAA+TGG 0.582231 5_2:-23231711 None:intergenic
CCAACAGGGTTGGGATCCAA+TGG 0.582231 5_2:-23233014 None:intergenic
CATCTGTATAACGGATGGGT+CGG 0.590072 5_2:+23236815 Msa0763830:CDS
AATTGAGCCTTATGCAGTTG+AGG 0.593409 5_2:+23229936 Msa0763830:CDS
TCAATGATGAAGTTTGAGAG+TGG 0.594836 5_2:+23229874 Msa0763830:exon
GCGCTCTATTATGGATGGGA+AGG 0.596345 5_2:+23236686 Msa0763830:CDS
AAAACATCTGTATAACGGAT+GGG 0.597862 5_2:+23236886 Msa0763830:CDS
AAAACATGTGTACAATGGAT+GGG 0.602015 5_2:+23236739 Msa0763830:CDS
GCTAGGATGAACCACCCGAA+GGG 0.604085 5_2:+23230200 Msa0763830:CDS
CTGCAACATAGATATTTCCT+CGG 0.604716 5_2:-23230238 None:intergenic
GCGCAGCTGAATCTCCCTGA+TGG 0.608680 5_2:-23230996 None:intergenic
GAAGCTTCTTACCAATGCTG+GGG 0.609183 5_2:+23236427 Msa0763830:CDS
CATCTGTATAACGGATGGGA+CGG 0.609816 5_2:+23236890 Msa0763830:CDS
TGAGGTTGATGGATGACTGT+GGG 0.611029 5_2:+23231991 Msa0763830:CDS
TGAGGTTGATGGATGACTGT+GGG 0.611029 5_2:+23233294 Msa0763830:CDS
CCCTACTTGTCATTGACAGG+GGG 0.613053 5_2:+23230966 Msa0763830:CDS
GGCTAGGATGAACCACCCGA+AGG 0.615525 5_2:+23230199 Msa0763830:CDS
AAAACATCTGTATAACGGAT+GGG 0.615653 5_2:+23236811 Msa0763830:CDS
TAATGAATCTCCAATAGGGG+AGG 0.617455 5_2:+23237165 Msa0763830:three_prime_UTR
CTTGTGGCAGGATCTGCTGA+AGG 0.620300 5_2:+23230143 Msa0763830:CDS
AGATAGCAGGCCAAAACTTG+TGG 0.620856 5_2:+23230127 Msa0763830:intron
TCGTAATCAGTATCATTCAT+CGG 0.624454 5_2:+23236943 Msa0763830:CDS
AGAGAATCACCGTAATCCAA+AGG 0.627579 5_2:-23237064 None:intergenic
TAGAGCGCTCTATTATGGAT+GGG 0.629076 5_2:+23236682 Msa0763830:CDS
AGGGGTTACGACAATTGCTG+GGG 0.629419 5_2:+23230847 Msa0763830:intron
CGGTAATGAATCTCCAATAG+GGG 0.631029 5_2:+23237162 Msa0763830:three_prime_UTR
TGTCGATGGACCAAGTGAAG+AGG 0.634224 5_2:+23230895 Msa0763830:CDS
ACCCATTATTTCCACTACTG+AGG 0.636531 5_2:-23236450 None:intergenic
GAAATAGATGAGGATAATGG+TGG 0.640252 5_2:-23229247 None:intergenic
AATGAATCTCCAATAGGGGA+GGG 0.640999 5_2:+23237166 Msa0763830:three_prime_UTR
GGCGGTCTGACAGATTTCAA+CGG 0.642172 5_2:-23236344 None:intergenic
TACGAAAGTGGATTTCCACT+CGG 0.643863 5_2:+23231040 Msa0763830:CDS
TCCCTACTTGTCATTGACAG+GGG 0.647961 5_2:+23230965 Msa0763830:CDS
AAAATGCAACAATTGTGGCA+AGG 0.653611 5_2:+23236659 Msa0763830:CDS
CATGTGTACAATGGATGGGA+AGG 0.653998 5_2:+23236743 Msa0763830:CDS
CTAGGATGAACCACCCGAAG+GGG 0.655646 5_2:+23230201 Msa0763830:CDS
TGTTCAATTTGTTTACACCA+GGG 0.660647 5_2:-23237303 None:intergenic
ACTTGCAGGTGAAATAGATG+AGG 0.661290 5_2:-23229257 None:intergenic
ATTGGTAAGAAGCTTCCCAA+TGG 0.665400 5_2:-23236420 None:intergenic
TCTTCTGATGGAATCAAAGG+CGG 0.665746 5_2:-23236362 None:intergenic
CAACAGTAATCCCCTTCGGG+TGG 0.668291 5_2:-23230211 None:intergenic
CGTTGATGGAAAATTAAGAG+AGG 0.669642 5_2:+23230178 Msa0763830:CDS
TTGAGGTTGATGGATGACTG+TGG 0.673085 5_2:+23231990 Msa0763830:CDS
TTGAGGTTGATGGATGACTG+TGG 0.673085 5_2:+23233293 Msa0763830:CDS
GTTGATGGATGACTGTGGGA+AGG 0.674863 5_2:+23231995 Msa0763830:CDS
GTTGATGGATGACTGTGGGA+AGG 0.674863 5_2:+23233298 Msa0763830:CDS
TTACTATGAGCAAAGTCGCG+AGG 0.674883 5_2:+23236976 Msa0763830:CDS
TCTATGATCATCATAATATG+CGG 0.675458 5_2:+23237086 Msa0763830:CDS
GTTCTTGGGTCAATAGAAGG+AGG 0.680904 5_2:-23236590 None:intergenic
CTGTTGGTGATTTGATACGA+TGG 0.683468 5_2:+23231727 Msa0763830:CDS
CTGTTGGTGATTTGATACGA+TGG 0.683468 5_2:+23233030 Msa0763830:CDS
GGGATTACTGTTGATGACCG+AGG 0.686913 5_2:+23230221 Msa0763830:CDS
TTGTTGCGTAAATAATCACG+AGG 0.688629 5_2:-23229161 None:intergenic
GTTTGAGAGTGGATACAATG+TGG 0.694884 5_2:+23229885 Msa0763830:CDS
AGTTGAGGTGTTGTCTAATG+GGG 0.701689 5_2:+23229951 Msa0763830:CDS
GGGGTTACGACAATTGCTGG+GGG 0.722033 5_2:+23230848 Msa0763830:intron
ATCGTATCAAATCACCAACA+GGG 0.735166 5_2:-23231725 None:intergenic
ATCGTATCAAATCACCAACA+GGG 0.735166 5_2:-23233028 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTGATAAATGAAAAATT+GGG - chr5_2:23229305-23229324 None:intergenic 10.0%
!! AAAATTGATAAATGAAAAAT+TGG - chr5_2:23229306-23229325 None:intergenic 10.0%
!!! ATTAGTTGATTTTTTTTTTT+AGG + chr5_2:23234072-23234091 Msa0763830:intron 10.0%
!!! TTAGTTGATTTTTTTTTTTA+GGG + chr5_2:23234073-23234092 Msa0763830:intron 10.0%
!! ATTATATTATGAATAATACA+AGG + chr5_2:23234285-23234304 Msa0763830:intron 10.0%
!! AAAAAGAAAATATTAAATGA+GGG - chr5_2:23234817-23234836 None:intergenic 10.0%
!! TAAAAAGAAAATATTAAATG+AGG - chr5_2:23234818-23234837 None:intergenic 10.0%
!!! GTTTTATTTCTTATAATATA+AGG + chr5_2:23234946-23234965 Msa0763830:intron 10.0%
!!! TTATAATGATTTCTTTTAAA+TGG + chr5_2:23237207-23237226 Msa0763830:three_prime_UTR 10.0%
!! TATTAAAACTATATTGTATC+TGG - chr5_2:23229574-23229593 None:intergenic 15.0%
!!! AGTTTTAATATATGTAGTTT+TGG + chr5_2:23229584-23229603 Msa0763830:intron 15.0%
!!! CTATTATTTTTGTTTTGTTT+TGG + chr5_2:23229805-23229824 Msa0763830:intron 15.0%
!!! TTTAATTATTTTTTTGGTAG+TGG - chr5_2:23231244-23231263 None:intergenic 15.0%
!! CTACCAAAAAAATAATTAAA+TGG + chr5_2:23231244-23231263 Msa0763830:intron 15.0%
!!! ATGCCATTTAATTATTTTTT+TGG - chr5_2:23231250-23231269 None:intergenic 15.0%
!! ATTGTGCATTTAATAAAAAT+TGG - chr5_2:23232472-23232491 None:intergenic 15.0%
!!! TGTATATACATATTTTTTTC+TGG + chr5_2:23232499-23232518 Msa0763830:intron 15.0%
!! ATTGTGCATTTAATAAAAAT+TGG - chr5_2:23232472-23232491 None:intergenic 15.0%
!!! TGTATATACATATTTTTTTC+TGG + chr5_2:23232499-23232518 Msa0763830:intron 15.0%
!! TATTCATAATATAATCTTGA+TGG - chr5_2:23234280-23234299 None:intergenic 15.0%
!!! TGTAAAATTTTCTTATAGTA+AGG - chr5_2:23234755-23234774 None:intergenic 15.0%
!!! TAATTTCCAATTTTTAACTA+CGG - chr5_2:23235266-23235285 None:intergenic 15.0%
!! TAGAATAGTCATAAATAAAT+CGG + chr5_2:23235985-23236004 Msa0763830:intron 15.0%
!!! TTTTTTCAGACATTGTTAAT+GGG + chr5_2:23229353-23229372 Msa0763830:intron 20.0%
!! CTTCATATTAAAGTTGTATT+TGG - chr5_2:23229731-23229750 None:intergenic 20.0%
!!! TGCAATTTACATGTTATTTT+TGG - chr5_2:23230100-23230119 None:intergenic 20.0%
!! ATATTATGAATATGGCAATT+AGG + chr5_2:23230261-23230280 Msa0763830:CDS 20.0%
!! GTTATAATTTGATTAATCTC+TGG + chr5_2:23230311-23230330 Msa0763830:intron 20.0%
!! TCATTTGTGTATATATGTAT+AGG + chr5_2:23230364-23230383 Msa0763830:intron 20.0%
!!! GGAAATTTGAAATTCAAATT+TGG - chr5_2:23231318-23231337 None:intergenic 20.0%
!!! TTTTATTAAATGCACAATTC+AGG + chr5_2:23232474-23232493 Msa0763830:intron 20.0%
!! ACACAAAATGATAAAGAATA+TGG + chr5_2:23232550-23232569 Msa0763830:intron 20.0%
!! AAAATGATAAAGAATATGGT+CGG + chr5_2:23232554-23232573 Msa0763830:intron 20.0%
!!! GGAAATTTGAAATTCAAATT+TGG - chr5_2:23231318-23231337 None:intergenic 20.0%
!!! TTTTATTAAATGCACAATTC+AGG + chr5_2:23232474-23232493 Msa0763830:intron 20.0%
!! ACACAAAATGATAAAGAATA+TGG + chr5_2:23232550-23232569 Msa0763830:intron 20.0%
!! AAAATGATAAAGAATATGGT+CGG + chr5_2:23232554-23232573 Msa0763830:intron 20.0%
!!! CTAAGATGAATTTTAATAAC+AGG - chr5_2:23234181-23234200 None:intergenic 20.0%
!! TATCTCAAATGAAATTTCAT+GGG - chr5_2:23234459-23234478 None:intergenic 20.0%
!! ATATCTCAAATGAAATTTCA+TGG - chr5_2:23234460-23234479 None:intergenic 20.0%
!! TCAATCAATATATATTAACG+AGG + chr5_2:23234485-23234504 Msa0763830:intron 20.0%
!! ACCAAAAGAAGTAATATATT+CGG - chr5_2:23234732-23234751 None:intergenic 20.0%
!!! ATGTTTCTCAATTTTTTATG+AGG + chr5_2:23234857-23234876 Msa0763830:intron 20.0%
!!! TGTTTCTCAATTTTTTATGA+GGG + chr5_2:23234858-23234877 Msa0763830:intron 20.0%
!! ATTTCTTATAATATAAGGAC+CGG + chr5_2:23234951-23234970 Msa0763830:intron 20.0%
!!! ACTTATCTAAAACTCTAAAA+TGG + chr5_2:23235080-23235099 Msa0763830:intron 20.0%
!!! CTTATCTAAAACTCTAAAAT+GGG + chr5_2:23235081-23235100 Msa0763830:intron 20.0%
!! TATAAAGTTTGAGTATATTG+TGG - chr5_2:23235118-23235137 None:intergenic 20.0%
!! AATGTGTAATTGAAACAAAT+TGG + chr5_2:23235156-23235175 Msa0763830:intron 20.0%
!!! TTCATTTATTTCAAAGCTTT+TGG - chr5_2:23235219-23235238 None:intergenic 20.0%
!!! AAAGCTTTGAAATAAATGAA+TGG + chr5_2:23235219-23235238 Msa0763830:intron 20.0%
!! AAAAATTGGAAATTAACACT+TGG + chr5_2:23235271-23235290 Msa0763830:intron 20.0%
!! ATCCAAAAACAAAATATGAT+TGG + chr5_2:23236022-23236041 Msa0763830:intron 20.0%
!!! TACCAATCATATTTTGTTTT+TGG - chr5_2:23236027-23236046 None:intergenic 20.0%
!! TATACAGTAAAAAATGTTTG+CGG + chr5_2:23237142-23237161 Msa0763830:three_prime_UTR 20.0%
!!! AATGATTTCTTTTAAATGGT+AGG + chr5_2:23237211-23237230 Msa0763830:three_prime_UTR 20.0%
!!! CTTTTTTCAGACATTGTTAA+TGG + chr5_2:23229352-23229371 Msa0763830:intron 25.0%
!!! AGATAGATCTATACCTTTTT+TGG - chr5_2:23229437-23229456 None:intergenic 25.0%
! TGTTGCAGATATTATGAATA+TGG + chr5_2:23230253-23230272 Msa0763830:CDS 25.0%
! ATTCCTGTAAATGTTTCTTT+AGG + chr5_2:23230437-23230456 Msa0763830:intron 25.0%
! TAAGCATTTGTAAGATTGTT+TGG + chr5_2:23230523-23230542 Msa0763830:intron 25.0%
! AAGCATTTGTAAGATTGTTT+GGG + chr5_2:23230524-23230543 Msa0763830:intron 25.0%
!! GATATCTGTTTTCTCTTTTA+TGG + chr5_2:23230799-23230818 Msa0763830:intron 25.0%
!! TGTTTTCTCTTTTATGGAAA+AGG + chr5_2:23230805-23230824 Msa0763830:intron 25.0%
!! AATTAAGATGTCTGTTTTCA+GGG + chr5_2:23230828-23230847 Msa0763830:intron 25.0%
!! ATTTTCTTATGACTTTGATG+TGG + chr5_2:23230922-23230941 Msa0763830:CDS 25.0%
! CATCTTTATATCTAATCCAA+AGG + chr5_2:23231110-23231129 Msa0763830:intron 25.0%
!!! TTGGTAATTGCAATAGTTTT+GGG - chr5_2:23231183-23231202 None:intergenic 25.0%
!!! ATTGGTAATTGCAATAGTTT+TGG - chr5_2:23231184-23231203 None:intergenic 25.0%
! TAAATAGCCTGAAACAATAT+TGG - chr5_2:23231202-23231221 None:intergenic 25.0%
! ATTGTTTCAGGCTATTTAAA+TGG + chr5_2:23231204-23231223 Msa0763830:intron 25.0%
! TTGTTTCAGGCTATTTAAAT+GGG + chr5_2:23231205-23231224 Msa0763830:intron 25.0%
! TATTTAACTCCTTAAATGCA+TGG + chr5_2:23231349-23231368 Msa0763830:intron 25.0%
! ATAGATGGAATAGAAAAAGT+TGG - chr5_2:23231376-23231395 None:intergenic 25.0%
! TTATATAGGCATAATTAGCA+TGG - chr5_2:23231466-23231485 None:intergenic 25.0%
! ATGCTAATTATGCCTATATA+AGG + chr5_2:23231465-23231484 Msa0763830:intron 25.0%
! GGAAAATAACATCCTTATAT+AGG - chr5_2:23231480-23231499 None:intergenic 25.0%
!!! GTCTGTTTTTCTATTTGTAT+TGG + chr5_2:23231652-23231671 Msa0763830:intron 25.0%
!! TTCATTTGAGATATCAAGAA+TGG + chr5_2:23231824-23231843 Msa0763830:intron 25.0%
!!! ATGCTTGATCTTATTTTGTT+TGG + chr5_2:23232240-23232259 Msa0763830:intron 25.0%
!!! TTTGTTTGGTTTTTCTGTTT+TGG + chr5_2:23232254-23232273 Msa0763830:intron 25.0%
!!! TTTCTGTTTTGGTTATGTTT+TGG + chr5_2:23232265-23232284 Msa0763830:intron 25.0%
!! TTTTTCCTGTACTATGTTAT+TGG + chr5_2:23232327-23232346 Msa0763830:intron 25.0%
! TAATAAAAATTGGAATCTCG+TGG - chr5_2:23232462-23232481 None:intergenic 25.0%
!!! TACATATTTTTTTCTGGTAC+AGG + chr5_2:23232505-23232524 Msa0763830:intron 25.0%
!!! GATATTTTGTTTTGCTCTTT+TGG - chr5_2:23232599-23232618 None:intergenic 25.0%
! TATTTAACTCCTTAAATGCA+TGG + chr5_2:23231349-23231368 Msa0763830:intron 25.0%
! ATAGATGGAATAGAAAAAGT+TGG - chr5_2:23231376-23231395 None:intergenic 25.0%
! TTATATAGGCATAATTAGCA+TGG - chr5_2:23231466-23231485 None:intergenic 25.0%
! ATGCTAATTATGCCTATATA+AGG + chr5_2:23231465-23231484 Msa0763830:intron 25.0%
! GGAAAATAACATCCTTATAT+AGG - chr5_2:23231480-23231499 None:intergenic 25.0%
!!! GTCTGTTTTTCTATTTGTAT+TGG + chr5_2:23231652-23231671 Msa0763830:intron 25.0%
!! TTCATTTGAGATATCAAGAA+TGG + chr5_2:23231824-23231843 Msa0763830:intron 25.0%
!!! ATGCTTGATCTTATTTTGTT+TGG + chr5_2:23232240-23232259 Msa0763830:intron 25.0%
!!! TTTGTTTGGTTTTTCTGTTT+TGG + chr5_2:23232254-23232273 Msa0763830:intron 25.0%
!!! TTTCTGTTTTGGTTATGTTT+TGG + chr5_2:23232265-23232284 Msa0763830:intron 25.0%
!! TTTTTCCTGTACTATGTTAT+TGG + chr5_2:23232327-23232346 Msa0763830:intron 25.0%
! TAATAAAAATTGGAATCTCG+TGG - chr5_2:23232462-23232481 None:intergenic 25.0%
!!! TACATATTTTTTTCTGGTAC+AGG + chr5_2:23232505-23232524 Msa0763830:intron 25.0%
!!! ATTTTAATCGTAGTAGGTTT+TGG - chr5_2:23233902-23233921 None:intergenic 25.0%
! AAACCTACTACGATTAAAAT+TGG + chr5_2:23233902-23233921 Msa0763830:intron 25.0%
!!! ATACCAATTTTAATCGTAGT+AGG - chr5_2:23233908-23233927 None:intergenic 25.0%
!!! TACATTGCACAATTTTTTAG+AGG - chr5_2:23234353-23234372 None:intergenic 25.0%
! TACTAAGTGTATATACACAT+TGG + chr5_2:23234396-23234415 Msa0763830:intron 25.0%
! AAATGAAATTTCATGGGATA+AGG - chr5_2:23234453-23234472 None:intergenic 25.0%
! AATTATCATGTTGAGAATTG+TGG + chr5_2:23234647-23234666 Msa0763830:intron 25.0%
! AAAAGAAGTAATATATTCGG+TGG - chr5_2:23234729-23234748 None:intergenic 25.0%
!! ACCGAATATATTACTTCTTT+TGG + chr5_2:23234728-23234747 Msa0763830:intron 25.0%
! ATATCTCAAATGAAATTGCA+TGG + chr5_2:23234985-23235004 Msa0763830:intron 25.0%
! TATCTCAAATGAAATTGCAT+GGG + chr5_2:23234986-23235005 Msa0763830:intron 25.0%
!! AGTTAACACAACTTTAAAAG+TGG + chr5_2:23235421-23235440 Msa0763830:intron 25.0%
!! TGAAAGGATATGTTTTCTTA+GGG - chr5_2:23236622-23236641 None:intergenic 25.0%
!! ATGAAAGGATATGTTTTCTT+AGG - chr5_2:23236623-23236642 None:intergenic 25.0%
!!! TTATACAGATGTTTTTGTTG+TGG - chr5_2:23236806-23236825 None:intergenic 25.0%
! CAACAAAAACATCTGTATAA+CGG + chr5_2:23236806-23236825 Msa0763830:CDS 25.0%
!!! TTATACAGATGTTTTTGTTG+TGG - chr5_2:23236806-23236825 None:intergenic 25.0%
! CAACAAAAACATCTGTATAA+CGG + chr5_2:23236806-23236825 Msa0763830:CDS 25.0%
! TCTATGATCATCATAATATG+CGG + chr5_2:23237086-23237105 Msa0763830:CDS 25.0%
!! CAGAAACTTATTTGTTTCTT+CGG + chr5_2:23237260-23237279 Msa0763830:three_prime_UTR 25.0%
! GAACATTGAGCATAATTTAA+AGG + chr5_2:23237321-23237340 Msa0763830:three_prime_UTR 25.0%
CTTAAACCAACTACCAAAAA+AGG + chr5_2:23229421-23229440 Msa0763830:five_prime_UTR 30.0%
!!! TCTATACCTTTTTTGGTAGT+TGG - chr5_2:23229430-23229449 None:intergenic 30.0%
!! GTATAGTTAGTAGAAGTATC+TGG + chr5_2:23229532-23229551 Msa0763830:intron 30.0%
ATTAGGAAAATTAGCGATTC+AGG + chr5_2:23230278-23230297 Msa0763830:CDS 30.0%
AACTGTCTTGTAGAAATTCA+AGG + chr5_2:23230405-23230424 Msa0763830:intron 30.0%
TTAGGCCAAACTTATATTCA+AGG + chr5_2:23230455-23230474 Msa0763830:intron 30.0%
TAGGCCAAACTTATATTCAA+GGG + chr5_2:23230456-23230475 Msa0763830:intron 30.0%
CAAACCCTTGAATATAAGTT+TGG - chr5_2:23230463-23230482 None:intergenic 30.0%
! CTTATATTCAAGGGTTTGTT+TGG + chr5_2:23230465-23230484 Msa0763830:intron 30.0%
ATAAGCTGAAAACAGCTTAT+GGG - chr5_2:23230570-23230589 None:intergenic 30.0%
AATAAGCTGAAAACAGCTTA+TGG - chr5_2:23230571-23230590 None:intergenic 30.0%
! GAATTAAGATGTCTGTTTTC+AGG + chr5_2:23230827-23230846 Msa0763830:intron 30.0%
! ATTAAGATGTCTGTTTTCAG+GGG + chr5_2:23230829-23230848 Msa0763830:intron 30.0%
! AAATCCACTTTCGTATTGAT+AGG - chr5_2:23231035-23231054 None:intergenic 30.0%
!!! GATTTGTTTTATTTACCGAG+TGG - chr5_2:23231058-23231077 None:intergenic 30.0%
!! TGGTAATTGCAATAGTTTTG+GGG - chr5_2:23231182-23231201 None:intergenic 30.0%
GCAATTACCAATATTGTTTC+AGG + chr5_2:23231192-23231211 Msa0763830:intron 30.0%
TGTTTCAGGCTATTTAAATG+GGG + chr5_2:23231206-23231225 Msa0763830:intron 30.0%
!!! GATATTTTGTTTTGCTCTTC+TGG - chr5_2:23231296-23231315 None:intergenic 30.0%
GAGTTAAATAAGCTGTAGTT+GGG - chr5_2:23231339-23231358 None:intergenic 30.0%
AAAGTAATGCATACTGATGT+GGG - chr5_2:23231536-23231555 None:intergenic 30.0%
!! ACTTTATAGTTTTACCAGAC+AGG - chr5_2:23231625-23231644 None:intergenic 30.0%
TTGGCATAAGATTTCTGATT+TGG + chr5_2:23231671-23231690 Msa0763830:intron 30.0%
!! CATAAGATTTCTGATTTGGT+TGG + chr5_2:23231675-23231694 Msa0763830:intron 30.0%
AGATATCAAGAATGGTTGTT+TGG + chr5_2:23231832-23231851 Msa0763830:intron 30.0%
!!! ACTAGCTGTTTTATTTTACC+AGG + chr5_2:23231914-23231933 Msa0763830:intron 30.0%
!! CCAACTTTAAAATGGTCATA+TGG - chr5_2:23232051-23232070 None:intergenic 30.0%
!!! CCATATGACCATTTTAAAGT+TGG + chr5_2:23232048-23232067 Msa0763830:intron 30.0%
!!! TATGACCATTTTAAAGTTGG+CGG + chr5_2:23232051-23232070 Msa0763830:intron 30.0%
TTATTCGATATTAGTAGTCC+TGG + chr5_2:23232174-23232193 Msa0763830:intron 30.0%
TATTCGATATTAGTAGTCCT+GGG + chr5_2:23232175-23232194 Msa0763830:intron 30.0%
TTCAACCAATAACATAGTAC+AGG - chr5_2:23232335-23232354 None:intergenic 30.0%
TGCTTGTCATATCGATATTA+AGG - chr5_2:23232428-23232447 None:intergenic 30.0%
GAGTTAAATAAGCTGTAGTT+GGG - chr5_2:23231339-23231358 None:intergenic 30.0%
AAAGTAATGCATACTGATGT+GGG - chr5_2:23231536-23231555 None:intergenic 30.0%
!! ACTTTATAGTTTTACCAGAC+AGG - chr5_2:23231625-23231644 None:intergenic 30.0%
TTGGCATAAGATTTCTGATT+TGG + chr5_2:23231671-23231690 Msa0763830:intron 30.0%
!! CATAAGATTTCTGATTTGGT+TGG + chr5_2:23231675-23231694 Msa0763830:intron 30.0%
AGATATCAAGAATGGTTGTT+TGG + chr5_2:23231832-23231851 Msa0763830:intron 30.0%
!!! ACTAGCTGTTTTATTTTACC+AGG + chr5_2:23231914-23231933 Msa0763830:intron 30.0%
!! CCAACTTTAAAATGGTCATA+TGG - chr5_2:23232051-23232070 None:intergenic 30.0%
!!! CCATATGACCATTTTAAAGT+TGG + chr5_2:23232048-23232067 Msa0763830:intron 30.0%
!!! TATGACCATTTTAAAGTTGG+CGG + chr5_2:23232051-23232070 Msa0763830:intron 30.0%
TTATTCGATATTAGTAGTCC+TGG + chr5_2:23232174-23232193 Msa0763830:intron 30.0%
TATTCGATATTAGTAGTCCT+GGG + chr5_2:23232175-23232194 Msa0763830:intron 30.0%
TTCAACCAATAACATAGTAC+AGG - chr5_2:23232335-23232354 None:intergenic 30.0%
TGCTTGTCATATCGATATTA+AGG - chr5_2:23232428-23232447 None:intergenic 30.0%
GAAGAAAAAAAACTGTCGTT+TGG + chr5_2:23233939-23233958 Msa0763830:intron 30.0%
ACAGAAACATTTGACACAAA+TGG + chr5_2:23234000-23234019 Msa0763830:intron 30.0%
TTAGAGGAATACATATCGTT+TGG - chr5_2:23234337-23234356 None:intergenic 30.0%
ATAATTTATTACCCCATCCA+CGG - chr5_2:23234633-23234652 None:intergenic 30.0%
ATACATACATACATGTAGCA+TGG - chr5_2:23234692-23234711 None:intergenic 30.0%
ATGCTACATGTATGTATGTA+TGG + chr5_2:23234691-23234710 Msa0763830:intron 30.0%
AAATGAAATTGCATGGGATA+AGG + chr5_2:23234992-23235011 Msa0763830:intron 30.0%
GAGTATATTGTGGAATTTAG+TGG - chr5_2:23235108-23235127 None:intergenic 30.0%
! TTCATTTAGAGCACCATTAT+CGG - chr5_2:23235361-23235380 None:intergenic 30.0%
AACTAAGTTGCGATATTCAT+CGG - chr5_2:23235405-23235424 None:intergenic 30.0%
TAACGATTCGTATACAACTT+TGG - chr5_2:23235518-23235537 None:intergenic 30.0%
TTGAATGTAACCAAATGTGT+CGG - chr5_2:23235890-23235909 None:intergenic 30.0%
AAATAAATCGGATAGACAGT+TGG + chr5_2:23235997-23236016 Msa0763830:intron 30.0%
TCCAGATTTCTTGAGAAAAA+AGG + chr5_2:23236077-23236096 Msa0763830:intron 30.0%
!!! TCCTTTTTTCTCAAGAAATC+TGG - chr5_2:23236081-23236100 None:intergenic 30.0%
! AATTCATCTCATGCTTTTGT+AGG + chr5_2:23236274-23236293 Msa0763830:intron 30.0%
TTATAAGATTCGTCTTCTGA+TGG - chr5_2:23236377-23236396 None:intergenic 30.0%
GAATCTTATAAGCAAGAAGA+AGG + chr5_2:23236386-23236405 Msa0763830:CDS 30.0%
!! CTTTGAAATTCATAGCTTTG+CGG - chr5_2:23236488-23236507 None:intergenic 30.0%
ATTACAAAACTTTCTTGCAC+AGG - chr5_2:23236554-23236573 None:intergenic 30.0%
! GAAAGGATATGTTTTCTTAG+GGG - chr5_2:23236621-23236640 None:intergenic 30.0%
!!! CCACAATTGTTGCATTTTTT+CGG - chr5_2:23236657-23236676 None:intergenic 30.0%
TAAAACATGTGTACAATGGA+TGG + chr5_2:23236738-23236757 Msa0763830:CDS 30.0%
AAAACATGTGTACAATGGAT+GGG + chr5_2:23236739-23236758 Msa0763830:CDS 30.0%
! AAAAACATCTGTATAACGGA+TGG + chr5_2:23236810-23236829 Msa0763830:CDS 30.0%
!! AAAACATCTGTATAACGGAT+GGG + chr5_2:23236811-23236830 Msa0763830:CDS 30.0%
! AAAAACATCTGTATAACGGA+TGG + chr5_2:23236810-23236829 Msa0763830:CDS 30.0%
!! AAAACATCTGTATAACGGAT+GGG + chr5_2:23236811-23236830 Msa0763830:CDS 30.0%
TCGTAATCAGTATCATTCAT+CGG + chr5_2:23236943-23236962 Msa0763830:CDS 30.0%
GAAACCAATGAGATAGTATT+TGG + chr5_2:23236998-23237017 Msa0763830:CDS 30.0%
! TGTTCAATTTGTTTACACCA+GGG - chr5_2:23237306-23237325 None:intergenic 30.0%
! ATGTTCAATTTGTTTACACC+AGG - chr5_2:23237307-23237326 None:intergenic 30.0%
! AAGGCAAGATCAAGAAATTT+TGG + chr5_2:23237340-23237359 Msa0763830:three_prime_UTR 30.0%
ATTTAAGCATGACCATCAAA+AGG - chr5_2:23237375-23237394 None:intergenic 30.0%
TTGTTGCGTAAATAATCACG+AGG - chr5_2:23229164-23229183 None:intergenic 35.0%
! GAAATAGATGAGGATAATGG+TGG - chr5_2:23229250-23229269 None:intergenic 35.0%
GGTGAAATAGATGAGGATAA+TGG - chr5_2:23229253-23229272 None:intergenic 35.0%
TTTAAGTGAGAACACCCATT+TGG - chr5_2:23229407-23229426 None:intergenic 35.0%
TTTAGTATCAATCTCGTGTC+CGG - chr5_2:23229494-23229513 None:intergenic 35.0%
!!! GTTTTGTTTTGGTTGTGATG+TGG + chr5_2:23229816-23229835 Msa0763830:intron 35.0%
!! TTTTGGTTGTGATGTGGAAT+TGG + chr5_2:23229822-23229841 Msa0763830:intron 35.0%
TCAATGATGAAGTTTGAGAG+TGG + chr5_2:23229874-23229893 Msa0763830:exon 35.0%
AATGTGGAAACTGTGTTTGA+TGG + chr5_2:23229901-23229920 Msa0763830:CDS 35.0%
! CGTTGATGGAAAATTAAGAG+AGG + chr5_2:23230178-23230197 Msa0763830:CDS 35.0%
ATGGAAAATTAAGAGAGGCT+AGG + chr5_2:23230183-23230202 Msa0763830:CDS 35.0%
CTGCAACATAGATATTTCCT+CGG - chr5_2:23230241-23230260 None:intergenic 35.0%
GAAAAAAGAAACGTCTCTAG+AGG - chr5_2:23230346-23230365 None:intergenic 35.0%
!! AGACAGTTGTGTTCTAGTTT+AGG - chr5_2:23230393-23230412 None:intergenic 35.0%
TGGCCTAAAGAAACATTTAC+AGG - chr5_2:23230443-23230462 None:intergenic 35.0%
CTTATTTCCATAAGCTTTCC+AGG + chr5_2:23230585-23230604 Msa0763830:intron 35.0%
AAGTTATCCTGGAAAGCTTA+TGG - chr5_2:23230595-23230614 None:intergenic 35.0%
!! GCTGTTTTCATAAGTTATCC+TGG - chr5_2:23230606-23230625 None:intergenic 35.0%
GAAAATTTAGCCTCTTCACT+TGG - chr5_2:23230908-23230927 None:intergenic 35.0%
GACTTTGATGTGGTTTATGT+TGG + chr5_2:23230932-23230951 Msa0763830:CDS 35.0%
!!! GTTTTGGGGGGAAATTTTTA+GGG - chr5_2:23231168-23231187 None:intergenic 35.0%
!!! AGTTTTGGGGGGAAATTTTT+AGG - chr5_2:23231169-23231188 None:intergenic 35.0%
!!! GTAATTGCAATAGTTTTGGG+GGG - chr5_2:23231180-23231199 None:intergenic 35.0%
!!! GGTAATTGCAATAGTTTTGG+GGG - chr5_2:23231181-23231200 None:intergenic 35.0%
GGAGTTAAATAAGCTGTAGT+TGG - chr5_2:23231340-23231359 None:intergenic 35.0%
AAAGTTGGACCATGCATTTA+AGG - chr5_2:23231361-23231380 None:intergenic 35.0%
ATAGGCATAATTAGCATGGA+AGG - chr5_2:23231462-23231481 None:intergenic 35.0%
TATATAGACACATAGGTGCA+TGG - chr5_2:23231501-23231520 None:intergenic 35.0%
GAGCATGTATATAGACACAT+AGG - chr5_2:23231508-23231527 None:intergenic 35.0%
CAAAGTAATGCATACTGATG+TGG - chr5_2:23231537-23231556 None:intergenic 35.0%
CACATCAGTATGCATTACTT+TGG + chr5_2:23231535-23231554 Msa0763830:intron 35.0%
AGTGTTTGGATATCTCTGTT+AGG - chr5_2:23231587-23231606 None:intergenic 35.0%
AATGGTATGATAGCAGTGTT+TGG - chr5_2:23231601-23231620 None:intergenic 35.0%
ATCGTATCAAATCACCAACA+GGG - chr5_2:23231728-23231747 None:intergenic 35.0%
TCAAGAATGGTTGTTTGGTA+AGG + chr5_2:23231837-23231856 Msa0763830:intron 35.0%
! TTTTTAATCCATCCTTCACG+TGG + chr5_2:23231873-23231892 Msa0763830:intron 35.0%
! TTTTAATCCATCCTTCACGT+GGG + chr5_2:23231874-23231893 Msa0763830:intron 35.0%
ATGAAAATATACCCACGTGA+AGG - chr5_2:23231888-23231907 None:intergenic 35.0%
! TACCAGGAATTTGCTTACAA+TGG + chr5_2:23231930-23231949 Msa0763830:intron 35.0%
ATCCATTGTAAGCAAATTCC+TGG - chr5_2:23231935-23231954 None:intergenic 35.0%
ATATAAGGACTACTGCTTTG+AGG + chr5_2:23231973-23231992 Msa0763830:CDS 35.0%
! TAAGATTGCAGTCTCAGTTT+TGG + chr5_2:23232018-23232037 Msa0763830:CDS 35.0%
!!! AACGATTGGTTTTTGCAAGA+AGG + chr5_2:23232082-23232101 Msa0763830:intron 35.0%
TTGAACTTATATATGCAGCG+TGG + chr5_2:23232350-23232369 Msa0763830:intron 35.0%
TGAACTTATATATGCAGCGT+GGG + chr5_2:23232351-23232370 Msa0763830:intron 35.0%
GGAGTTAAATAAGCTGTAGT+TGG - chr5_2:23231340-23231359 None:intergenic 35.0%
AAAGTTGGACCATGCATTTA+AGG - chr5_2:23231361-23231380 None:intergenic 35.0%
ATAGGCATAATTAGCATGGA+AGG - chr5_2:23231462-23231481 None:intergenic 35.0%
TATATAGACACATAGGTGCA+TGG - chr5_2:23231501-23231520 None:intergenic 35.0%
GAGCATGTATATAGACACAT+AGG - chr5_2:23231508-23231527 None:intergenic 35.0%
CAAAGTAATGCATACTGATG+TGG - chr5_2:23231537-23231556 None:intergenic 35.0%
CACATCAGTATGCATTACTT+TGG + chr5_2:23231535-23231554 Msa0763830:intron 35.0%
AGTGTTTGGATATCTCTGTT+AGG - chr5_2:23231587-23231606 None:intergenic 35.0%
AATGGTATGATAGCAGTGTT+TGG - chr5_2:23231601-23231620 None:intergenic 35.0%
ATCGTATCAAATCACCAACA+GGG - chr5_2:23231728-23231747 None:intergenic 35.0%
TCAAGAATGGTTGTTTGGTA+AGG + chr5_2:23231837-23231856 Msa0763830:intron 35.0%
! TTTTTAATCCATCCTTCACG+TGG + chr5_2:23231873-23231892 Msa0763830:intron 35.0%
! TTTTAATCCATCCTTCACGT+GGG + chr5_2:23231874-23231893 Msa0763830:intron 35.0%
ATGAAAATATACCCACGTGA+AGG - chr5_2:23231888-23231907 None:intergenic 35.0%
! TACCAGGAATTTGCTTACAA+TGG + chr5_2:23231930-23231949 Msa0763830:intron 35.0%
ATCCATTGTAAGCAAATTCC+TGG - chr5_2:23231935-23231954 None:intergenic 35.0%
ATATAAGGACTACTGCTTTG+AGG + chr5_2:23231973-23231992 Msa0763830:CDS 35.0%
! TAAGATTGCAGTCTCAGTTT+TGG + chr5_2:23232018-23232037 Msa0763830:CDS 35.0%
!!! AACGATTGGTTTTTGCAAGA+AGG + chr5_2:23232082-23232101 Msa0763830:intron 35.0%
TTGAACTTATATATGCAGCG+TGG + chr5_2:23232350-23232369 Msa0763830:intron 35.0%
TGAACTTATATATGCAGCGT+GGG + chr5_2:23232351-23232370 Msa0763830:intron 35.0%
ATACTAAGCTTTCTTAACCG+TGG + chr5_2:23234613-23234632 Msa0763830:intron 35.0%
TCTTATAATATAAGGACCGG+AGG + chr5_2:23234954-23234973 Msa0763830:intron 35.0%
CTTATAATATAAGGACCGGA+GGG + chr5_2:23234955-23234974 Msa0763830:intron 35.0%
TGGCTACCGTAGTTAAAAAT+TGG + chr5_2:23235257-23235276 Msa0763830:intron 35.0%
TTTGTGTCAGATAAAAGGCA+CGG - chr5_2:23235314-23235333 None:intergenic 35.0%
! TGCCTTTTATCTGACACAAA+GGG + chr5_2:23235314-23235333 Msa0763830:intron 35.0%
AAGGGTGACCTAAATTCAAA+AGG + chr5_2:23235332-23235351 Msa0763830:intron 35.0%
TTTAAAAGTGGTGTATCGAG+AGG + chr5_2:23235433-23235452 Msa0763830:intron 35.0%
TTGCAATTCCTGTAGATTGA+AGG - chr5_2:23235669-23235688 None:intergenic 35.0%
!! ATGCTAGCTTTAGAGAACAA+AGG - chr5_2:23236201-23236220 None:intergenic 35.0%
!! TAGTGGAAATAATGGGTTTC+AGG + chr5_2:23236456-23236475 Msa0763830:CDS 35.0%
!! CTTTCAGGTTGATGGAATAA+AGG - chr5_2:23236515-23236534 None:intergenic 35.0%
CTTTATTCCATCAACCTGAA+AGG + chr5_2:23236513-23236532 Msa0763830:CDS 35.0%
!! TTATTTGCCTTTCAGGTTGA+TGG - chr5_2:23236523-23236542 None:intergenic 35.0%
CAAGCATTTATTTGCCTTTC+AGG - chr5_2:23236530-23236549 None:intergenic 35.0%
CTGAAAGGCAAATAAATGCT+TGG + chr5_2:23236528-23236547 Msa0763830:CDS 35.0%
! TCGGTGTCTTTAATCATGAA+AGG - chr5_2:23236638-23236657 None:intergenic 35.0%
CCGAAAAAATGCAACAATTG+TGG + chr5_2:23236654-23236673 Msa0763830:CDS 35.0%
AAAATGCAACAATTGTGGCA+AGG + chr5_2:23236659-23236678 Msa0763830:CDS 35.0%
!! CCATTGTACACATGTTTTAG+TGG - chr5_2:23236737-23236756 None:intergenic 35.0%
CCACTAAAACATGTGTACAA+TGG + chr5_2:23236734-23236753 Msa0763830:CDS 35.0%
TGCACCAAATACTATCTCAT+TGG - chr5_2:23237005-23237024 None:intergenic 35.0%
GTTATCAAGCCTTTGGATTA+CGG + chr5_2:23237055-23237074 Msa0763830:CDS 35.0%
CTGTATATACTCAGTACTTG+TGG - chr5_2:23237129-23237148 None:intergenic 35.0%
ACTTGCAGGTGAAATAGATG+AGG - chr5_2:23229260-23229279 None:intergenic 40.0%
TGTACCTGCTTTCACCAAAT+GGG + chr5_2:23229390-23229409 Msa0763830:five_prime_UTR 40.0%
TCTACGTGTCAATGTAGTCT+CGG - chr5_2:23229640-23229659 None:intergenic 40.0%
CACGTGTATTAGTGTCTTGT+TGG + chr5_2:23229702-23229721 Msa0763830:intron 40.0%
GTTTGAGAGTGGATACAATG+TGG + chr5_2:23229885-23229904 Msa0763830:CDS 40.0%
! AATTGAGCCTTATGCAGTTG+AGG + chr5_2:23229936-23229955 Msa0763830:CDS 40.0%
!! CAGTTGAGGTGTTGTCTAAT+GGG + chr5_2:23229950-23229969 Msa0763830:CDS 40.0%
!! AGTTGAGGTGTTGTCTAATG+GGG + chr5_2:23229951-23229970 Msa0763830:CDS 40.0%
ATAAGGTGAAGTTACCGCAT+TGG - chr5_2:23230049-23230068 None:intergenic 40.0%
GAGCAATGAGTGAGATCATA+AGG - chr5_2:23230066-23230085 None:intergenic 40.0%
!!! GTTATTTTTGGCCTGCTAGT+AGG - chr5_2:23230088-23230107 None:intergenic 40.0%
ATTGCAAATGTGCAGATAGC+AGG + chr5_2:23230114-23230133 Msa0763830:intron 40.0%
TCATCAACAGTAATCCCCTT+CGG - chr5_2:23230218-23230237 None:intergenic 40.0%
TCTACTTTGAACAGCAGAGT+TGG + chr5_2:23230752-23230771 Msa0763830:intron 40.0%
TTCCCTACTTGTCATTGACA+GGG + chr5_2:23230964-23230983 Msa0763830:CDS 40.0%
TGTGCCTATCAATACGAAAG+TGG + chr5_2:23231028-23231047 Msa0763830:CDS 40.0%
! TACGAAAGTGGATTTCCACT+CGG + chr5_2:23231040-23231059 Msa0763830:CDS 40.0%
GTTGTTTGCAATGGTACCTT+TGG - chr5_2:23231129-23231148 None:intergenic 40.0%
TATGCAAGGGTTGTTTGCAA+TGG - chr5_2:23231138-23231157 None:intergenic 40.0%
TTAGGGTTAGGGTTATGCAA+GGG - chr5_2:23231151-23231170 None:intergenic 40.0%
! TTTAGGGTTAGGGTTATGCA+AGG - chr5_2:23231152-23231171 None:intergenic 40.0%
!!! GGGGGAAATTTTTAGGGTTA+GGG - chr5_2:23231162-23231181 None:intergenic 40.0%
! TCTTCTGGAAGTTAAACGTG+GGG - chr5_2:23231281-23231300 None:intergenic 40.0%
! CTCTTCTGGAAGTTAAACGT+GGG - chr5_2:23231282-23231301 None:intergenic 40.0%
AACACGCACATTAGCATAGA+TGG - chr5_2:23231391-23231410 None:intergenic 40.0%
CTCATTGGTACTCACTACAT+TGG - chr5_2:23231415-23231434 None:intergenic 40.0%
TTGGATATCTCTGTTAGGCA+TGG - chr5_2:23231582-23231601 None:intergenic 40.0%
!! TAGTTTTACCAGACAGGCAA+TGG - chr5_2:23231619-23231638 None:intergenic 40.0%
ATCAAATCACCAACAGGGTT+GGG - chr5_2:23231723-23231742 None:intergenic 40.0%
TATCAAATCACCAACAGGGT+TGG - chr5_2:23231724-23231743 None:intergenic 40.0%
CATCGTATCAAATCACCAAC+AGG - chr5_2:23231729-23231748 None:intergenic 40.0%
!! CTGTTGGTGATTTGATACGA+TGG + chr5_2:23231727-23231746 Msa0763830:CDS 40.0%
CCACATATGTTCGACATTTC+CGG - chr5_2:23231766-23231785 None:intergenic 40.0%
AAATATACCCACGTGAAGGA+TGG - chr5_2:23231884-23231903 None:intergenic 40.0%
! GTGAACTCGCAGTTGATATA+AGG + chr5_2:23231958-23231977 Msa0763830:CDS 40.0%
! AACCACCGCCAACTTTAAAA+TGG - chr5_2:23232059-23232078 None:intergenic 40.0%
TACGTGAGGTTCTCATGTTA+TGG + chr5_2:23232106-23232125 Msa0763830:intron 40.0%
TGAGGTTCTCATGTTATGGT+GGG + chr5_2:23232110-23232129 Msa0763830:intron 40.0%
AACACGCACATTAGCATAGA+TGG - chr5_2:23231391-23231410 None:intergenic 40.0%
CTCATTGGTACTCACTACAT+TGG - chr5_2:23231415-23231434 None:intergenic 40.0%
TTGGATATCTCTGTTAGGCA+TGG - chr5_2:23231582-23231601 None:intergenic 40.0%
!! TAGTTTTACCAGACAGGCAA+TGG - chr5_2:23231619-23231638 None:intergenic 40.0%
ATCAAATCACCAACAGGGTT+GGG - chr5_2:23231723-23231742 None:intergenic 40.0%
TATCAAATCACCAACAGGGT+TGG - chr5_2:23231724-23231743 None:intergenic 40.0%
CATCGTATCAAATCACCAAC+AGG - chr5_2:23231729-23231748 None:intergenic 40.0%
!! CTGTTGGTGATTTGATACGA+TGG + chr5_2:23231727-23231746 Msa0763830:CDS 40.0%
CCACATATGTTCGACATTTC+CGG - chr5_2:23231766-23231785 None:intergenic 40.0%
AAATATACCCACGTGAAGGA+TGG - chr5_2:23231884-23231903 None:intergenic 40.0%
! GTGAACTCGCAGTTGATATA+AGG + chr5_2:23231958-23231977 Msa0763830:CDS 40.0%
! AACCACCGCCAACTTTAAAA+TGG - chr5_2:23232059-23232078 None:intergenic 40.0%
TACGTGAGGTTCTCATGTTA+TGG + chr5_2:23232106-23232125 Msa0763830:intron 40.0%
TGAGGTTCTCATGTTATGGT+GGG + chr5_2:23232110-23232129 Msa0763830:intron 40.0%
TGGATATAGTTGCACATCAC+AGG - chr5_2:23234317-23234336 None:intergenic 40.0%
TAAGCTTTCTTAACCGTGGA+TGG + chr5_2:23234617-23234636 Msa0763830:intron 40.0%
AAGCTTTCTTAACCGTGGAT+GGG + chr5_2:23234618-23234637 Msa0763830:intron 40.0%
TGAGATATCAATACTCCCTC+CGG - chr5_2:23234973-23234992 None:intergenic 40.0%
TTAACTACGGTAGCCAACAA+TGG - chr5_2:23235253-23235272 None:intergenic 40.0%
! ACACTTGGTGAATTATCCAC+AGG + chr5_2:23235286-23235305 Msa0763830:intron 40.0%
! GTGCCTTTTATCTGACACAA+AGG + chr5_2:23235313-23235332 Msa0763830:intron 40.0%
CACCCTTTGTGTCAGATAAA+AGG - chr5_2:23235319-23235338 None:intergenic 40.0%
! ATCGGCTGCCTTTTGAATTT+AGG - chr5_2:23235343-23235362 None:intergenic 40.0%
ATTCAAAAGGCAGCCGATAA+TGG + chr5_2:23235345-23235364 Msa0763830:intron 40.0%
! GGTGCTCTAAATGAAGTTGT+TGG + chr5_2:23235366-23235385 Msa0763830:intron 40.0%
! CCAATTTTATATGACCCGTG+CGG + chr5_2:23235607-23235626 Msa0763830:intron 40.0%
AGTGTATGCCTTCAATCTAC+AGG + chr5_2:23235658-23235677 Msa0763830:intron 40.0%
ACAGGAATTGCAATGCTTCT+CGG + chr5_2:23235676-23235695 Msa0763830:intron 40.0%
TGGCTTCTTTGGTTATATGC+TGG + chr5_2:23235702-23235721 Msa0763830:intron 40.0%
AAGTACAATTGTCGCATCTC+AGG + chr5_2:23235744-23235763 Msa0763830:intron 40.0%
TATAACACTGACACCTCAGA+TGG + chr5_2:23235841-23235860 Msa0763830:intron 40.0%
!! TATTCTATGAAGCACCGACA+CGG - chr5_2:23235972-23235991 None:intergenic 40.0%
! AACGGCTTTTGGTAAAGACT+CGG - chr5_2:23236329-23236348 None:intergenic 40.0%
! TGACAGATTTCAACGGCTTT+TGG - chr5_2:23236340-23236359 None:intergenic 40.0%
TCTTCTGATGGAATCAAAGG+CGG - chr5_2:23236365-23236384 None:intergenic 40.0%
TCGTCTTCTGATGGAATCAA+AGG - chr5_2:23236368-23236387 None:intergenic 40.0%
AAGGTCTCTTTGCATCCATT+GGG + chr5_2:23236405-23236424 Msa0763830:CDS 40.0%
ATTGGTAAGAAGCTTCCCAA+TGG - chr5_2:23236423-23236442 None:intergenic 40.0%
! GCCTCAGTAGTGGAAATAAT+GGG + chr5_2:23236449-23236468 Msa0763830:CDS 40.0%
ACCCATTATTTCCACTACTG+AGG - chr5_2:23236453-23236472 None:intergenic 40.0%
!! CAGGTTGATGGAATAAAGGT+TGG - chr5_2:23236511-23236530 None:intergenic 40.0%
! GGATATGTTTTCTTAGGGGT+TGG - chr5_2:23236617-23236636 None:intergenic 40.0%
! TAGAGCGCTCTATTATGGAT+GGG + chr5_2:23236682-23236701 Msa0763830:CDS 40.0%
! TGCTGTTGTTGTTGTTGTTG+CGG - chr5_2:23236857-23236876 None:intergenic 40.0%
GTCTGTAGTTATCAAGCCTT+TGG + chr5_2:23237048-23237067 Msa0763830:CDS 40.0%
AGAGAATCACCGTAATCCAA+AGG - chr5_2:23237067-23237086 None:intergenic 40.0%
TGCGGTAATGAATCTCCAAT+AGG + chr5_2:23237160-23237179 Msa0763830:three_prime_UTR 40.0%
GCGGTAATGAATCTCCAATA+GGG + chr5_2:23237161-23237180 Msa0763830:three_prime_UTR 40.0%
CGGTAATGAATCTCCAATAG+GGG + chr5_2:23237162-23237181 Msa0763830:three_prime_UTR 40.0%
TAATGAATCTCCAATAGGGG+AGG + chr5_2:23237165-23237184 Msa0763830:three_prime_UTR 40.0%
AATGAATCTCCAATAGGGGA+GGG + chr5_2:23237166-23237185 Msa0763830:three_prime_UTR 40.0%
! TGGTACGCTATTCCTTTTGA+TGG + chr5_2:23237360-23237379 Msa0763830:three_prime_UTR 40.0%
TCAGTGAATGACTCACTTGC+AGG - chr5_2:23229274-23229293 None:intergenic 45.0%
CTGTACCTGCTTTCACCAAA+TGG + chr5_2:23229389-23229408 Msa0763830:five_prime_UTR 45.0%
! AACACCCATTTGGTGAAAGC+AGG - chr5_2:23229397-23229416 None:intergenic 45.0%
CTACGTGTCAATGTAGTCTC+GGG - chr5_2:23229639-23229658 None:intergenic 45.0%
TGTTGAATGACAGCGATTGC+TGG + chr5_2:23229847-23229866 Msa0763830:intron 45.0%
GTTGAATGACAGCGATTGCT+GGG + chr5_2:23229848-23229867 Msa0763830:intron 45.0%
GTGTTTGATGGAAGCAAGCT+TGG + chr5_2:23229913-23229932 Msa0763830:CDS 45.0%
GACAACACCTCAACTGCATA+AGG - chr5_2:23229946-23229965 None:intergenic 45.0%
!! GCAGTTGAGGTGTTGTCTAA+TGG + chr5_2:23229949-23229968 Msa0763830:CDS 45.0%
TAATGGGGAGCTTCTGATTC+TGG + chr5_2:23229966-23229985 Msa0763830:CDS 45.0%
GGAGCTTCTGATTCTGGATT+CGG + chr5_2:23229972-23229991 Msa0763830:CDS 45.0%
GTTGTGTAAGTGTGCCAATG+CGG + chr5_2:23230032-23230051 Msa0763830:intron 45.0%
AGATAGCAGGCCAAAACTTG+TGG + chr5_2:23230127-23230146 Msa0763830:intron 45.0%
GGATCTGCTGAAGGATATTC+TGG + chr5_2:23230152-23230171 Msa0763830:CDS 45.0%
GGATATTCTGGACACGTTGA+TGG + chr5_2:23230164-23230183 Msa0763830:CDS 45.0%
CATCAACAGTAATCCCCTTC+GGG - chr5_2:23230217-23230236 None:intergenic 45.0%
GTTCCCTACTTGTCATTGAC+AGG + chr5_2:23230963-23230982 Msa0763830:CDS 45.0%
TCCCTACTTGTCATTGACAG+GGG + chr5_2:23230965-23230984 Msa0763830:CDS 45.0%
!!! GGGGGGAAATTTTTAGGGTT+AGG - chr5_2:23231163-23231182 None:intergenic 45.0%
! CTTCTGGAAGTTAAACGTGG+GGG - chr5_2:23231280-23231299 None:intergenic 45.0%
! GCTCTTCTGGAAGTTAAACG+TGG - chr5_2:23231283-23231302 None:intergenic 45.0%
CTATCATACCATTGCCTGTC+TGG + chr5_2:23231608-23231627 Msa0763830:intron 45.0%
CGATGGTTAACAAGCTTTGC+CGG + chr5_2:23231744-23231763 Msa0763830:CDS 45.0%
CCGGAAATGTCGAACATATG+TGG + chr5_2:23231763-23231782 Msa0763830:intron 45.0%
CGTTGAGCATGTAAGAGAAG+AGG + chr5_2:23231796-23231815 Msa0763830:intron 45.0%
!! GACTACTGCTTTGAGGTTGA+TGG + chr5_2:23231980-23231999 Msa0763830:CDS 45.0%
!! TTGAGGTTGATGGATGACTG+TGG + chr5_2:23231990-23232009 Msa0763830:CDS 45.0%
!! TGAGGTTGATGGATGACTGT+GGG + chr5_2:23231991-23232010 Msa0763830:CDS 45.0%
!!! GACCATTTTAAAGTTGGCGG+TGG + chr5_2:23232054-23232073 Msa0763830:intron 45.0%
!!! TGGCGGTGGTTTTAAACGAT+TGG + chr5_2:23232068-23232087 Msa0763830:intron 45.0%
! TTTTGCAAGAAGGCTACGTG+AGG + chr5_2:23232092-23232111 Msa0763830:intron 45.0%
GTGAGGTTCTCATGTTATGG+TGG + chr5_2:23232109-23232128 Msa0763830:intron 45.0%
! TAGTGCTTTTGCATGGTCTG+TGG + chr5_2:23232198-23232217 Msa0763830:intron 45.0%
! AGTGCTTTTGCATGGTCTGT+GGG + chr5_2:23232199-23232218 Msa0763830:intron 45.0%
CTATCATACCATTGCCTGTC+TGG + chr5_2:23231608-23231627 Msa0763830:intron 45.0%
CGATGGTTAACAAGCTTTGC+CGG + chr5_2:23231744-23231763 Msa0763830:CDS 45.0%
CCGGAAATGTCGAACATATG+TGG + chr5_2:23231763-23231782 Msa0763830:intron 45.0%
CGTTGAGCATGTAAGAGAAG+AGG + chr5_2:23231796-23231815 Msa0763830:intron 45.0%
!! GACTACTGCTTTGAGGTTGA+TGG + chr5_2:23231980-23231999 Msa0763830:CDS 45.0%
!! TTGAGGTTGATGGATGACTG+TGG + chr5_2:23231990-23232009 Msa0763830:CDS 45.0%
!! TGAGGTTGATGGATGACTGT+GGG + chr5_2:23231991-23232010 Msa0763830:CDS 45.0%
!!! GACCATTTTAAAGTTGGCGG+TGG + chr5_2:23232054-23232073 Msa0763830:intron 45.0%
!!! TGGCGGTGGTTTTAAACGAT+TGG + chr5_2:23232068-23232087 Msa0763830:intron 45.0%
! TTTTGCAAGAAGGCTACGTG+AGG + chr5_2:23232092-23232111 Msa0763830:intron 45.0%
GTGAGGTTCTCATGTTATGG+TGG + chr5_2:23232109-23232128 Msa0763830:intron 45.0%
! TAGTGCTTTTGCATGGTCTG+TGG + chr5_2:23232198-23232217 Msa0763830:intron 45.0%
! AGTGCTTTTGCATGGTCTGT+GGG + chr5_2:23232199-23232218 Msa0763830:intron 45.0%
AGTCTAATCATCAACGCCAG+CGG + chr5_2:23234511-23234530 Msa0763830:intron 45.0%
TTCAATGCACCACCAACTGT+TGG + chr5_2:23234536-23234555 Msa0763830:intron 45.0%
ACACTAAACACGCCAACAGT+TGG - chr5_2:23234551-23234570 None:intergenic 45.0%
TGTTGGCGTGTTTAGTGTGA+AGG + chr5_2:23234553-23234572 Msa0763830:intron 45.0%
AGCTTTCTTAACCGTGGATG+GGG + chr5_2:23234619-23234638 Msa0763830:intron 45.0%
AATGGAACCGTGTCCATTGT+TGG + chr5_2:23235237-23235256 Msa0763830:intron 45.0%
CCGCACGGGTCATATAAAAT+TGG - chr5_2:23235610-23235629 None:intergenic 45.0%
!! TGAGTGCTTGTCTAGTTCTC+TGG + chr5_2:23235779-23235798 Msa0763830:intron 45.0%
!! CAAATGTGTCGGTGTCGTAT+CGG - chr5_2:23235879-23235898 None:intergenic 45.0%
!! ATTCTATGAAGCACCGACAC+GGG - chr5_2:23235971-23235990 None:intergenic 45.0%
CTCATTGTAGCTGCATGACA+TGG + chr5_2:23236117-23236136 Msa0763830:intron 45.0%
GAAGGTCTCTTTGCATCCAT+TGG + chr5_2:23236404-23236423 Msa0763830:CDS 45.0%
GGAAGCTTCTTACCAATGCT+GGG + chr5_2:23236426-23236445 Msa0763830:CDS 45.0%
GAAGCTTCTTACCAATGCTG+GGG + chr5_2:23236427-23236446 Msa0763830:CDS 45.0%
! GGCCTCAGTAGTGGAAATAA+TGG + chr5_2:23236448-23236467 Msa0763830:CDS 45.0%
GTTCTTGGGTCAATAGAAGG+AGG - chr5_2:23236593-23236612 None:intergenic 45.0%
GGAGTTCTTGGGTCAATAGA+AGG - chr5_2:23236596-23236615 None:intergenic 45.0%
TCTTAGGGGTTGGAGTTCTT+GGG - chr5_2:23236607-23236626 None:intergenic 45.0%
TTCTTAGGGGTTGGAGTTCT+TGG - chr5_2:23236608-23236627 None:intergenic 45.0%
! CAAGGTAGAGCGCTCTATTA+TGG + chr5_2:23236677-23236696 Msa0763830:CDS 45.0%
! GTAGAGCGCTCTATTATGGA+TGG + chr5_2:23236681-23236700 Msa0763830:CDS 45.0%
CATGTGTACAATGGATGGGA+AGG + chr5_2:23236743-23236762 Msa0763830:CDS 45.0%
!! CATCTGTATAACGGATGGGT+CGG + chr5_2:23236815-23236834 Msa0763830:CDS 45.0%
!! CATCTGTATAACGGATGGGA+CGG + chr5_2:23236890-23236909 Msa0763830:CDS 45.0%
TTACTATGAGCAAAGTCGCG+AGG + chr5_2:23236976-23236995 Msa0763830:CDS 45.0%
!! GATAGTATTTGGTGCAGTGC+AGG + chr5_2:23237009-23237028 Msa0763830:CDS 45.0%
TTGATTTCACCCTCCCCTAT+TGG - chr5_2:23237178-23237197 None:intergenic 45.0%
!!! TATTTTCTTTTTAATATTAA+TGG + chr5_2:23234825-23234844 Msa0763830:intron 5.0%
!!! ATTTTCTTTTTAATATTAAT+GGG + chr5_2:23234826-23234845 Msa0763830:intron 5.0%
!! CAAAGCACTGACACAGACAC+CGG + chr5_2:23229472-23229491 Msa0763830:intron 50.0%
CACTCATTGCTCCTACTAGC+AGG + chr5_2:23230074-23230093 Msa0763830:intron 50.0%
! GCAGATCCTGCCACAAGTTT+TGG - chr5_2:23230140-23230159 None:intergenic 50.0%
!! GGGATTACTGTTGATGACCG+AGG + chr5_2:23230221-23230240 Msa0763830:CDS 50.0%
TCAGGGGTTACGACAATTGC+TGG + chr5_2:23230845-23230864 Msa0763830:intron 50.0%
CAGGGGTTACGACAATTGCT+GGG + chr5_2:23230846-23230865 Msa0763830:intron 50.0%
AGGGGTTACGACAATTGCTG+GGG + chr5_2:23230847-23230866 Msa0763830:intron 50.0%
CTTCACTTGGTCCATCGACA+TGG - chr5_2:23230895-23230914 None:intergenic 50.0%
TGTCGATGGACCAAGTGAAG+AGG + chr5_2:23230895-23230914 Msa0763830:CDS 50.0%
CCCCCTGTCAATGACAAGTA+GGG - chr5_2:23230969-23230988 None:intergenic 50.0%
CCCTACTTGTCATTGACAGG+GGG + chr5_2:23230966-23230985 Msa0763830:CDS 50.0%
TCCCCCTGTCAATGACAAGT+AGG - chr5_2:23230970-23230989 None:intergenic 50.0%
AGGTGCATGACAGAGCTCAT+TGG - chr5_2:23231430-23231449 None:intergenic 50.0%
ATGAGCTCTGTCATGCACCT+AGG + chr5_2:23231430-23231449 Msa0763830:intron 50.0%
! TGGTGATTTTGCAGCGCCAT+TGG + chr5_2:23231695-23231714 Msa0763830:intron 50.0%
! GTTGATGGATGACTGTGGGA+AGG + chr5_2:23231995-23232014 Msa0763830:CDS 50.0%
!! ATGGTGGGTGAACTTGCTGT+TGG + chr5_2:23232125-23232144 Msa0763830:intron 50.0%
!! TGGTGGGTGAACTTGCTGTT+GGG + chr5_2:23232126-23232145 Msa0763830:intron 50.0%
! TCCTGGGTAGTGCTTTTGCA+TGG + chr5_2:23232191-23232210 Msa0763830:intron 50.0%
!! ACCATGCAAAAGCACTACCC+AGG - chr5_2:23232195-23232214 None:intergenic 50.0%
!! TTGCATGGTCTGTGGGTTAG+TGG + chr5_2:23232206-23232225 Msa0763830:intron 50.0%
AGGTGCATGACAGAGCTCAT+TGG - chr5_2:23231430-23231449 None:intergenic 50.0%
ATGAGCTCTGTCATGCACCT+AGG + chr5_2:23231430-23231449 Msa0763830:intron 50.0%
! TGGTGATTTTGCAGCGCCAT+TGG + chr5_2:23231695-23231714 Msa0763830:intron 50.0%
! GTTGATGGATGACTGTGGGA+AGG + chr5_2:23231995-23232014 Msa0763830:CDS 50.0%
!! ATGGTGGGTGAACTTGCTGT+TGG + chr5_2:23232125-23232144 Msa0763830:intron 50.0%
!! TGGTGGGTGAACTTGCTGTT+GGG + chr5_2:23232126-23232145 Msa0763830:intron 50.0%
! TCCTGGGTAGTGCTTTTGCA+TGG + chr5_2:23232191-23232210 Msa0763830:intron 50.0%
!! ACCATGCAAAAGCACTACCC+AGG - chr5_2:23232195-23232214 None:intergenic 50.0%
!! TTGCATGGTCTGTGGGTTAG+TGG + chr5_2:23232206-23232225 Msa0763830:intron 50.0%
CTAAACACGCCAACAGTTGG+TGG - chr5_2:23234548-23234567 None:intergenic 50.0%
ACGGTAGCCAACAATGGACA+CGG - chr5_2:23235247-23235266 None:intergenic 50.0%
! ATTGCAATGCTTCTCGGTGC+TGG + chr5_2:23235682-23235701 Msa0763830:intron 50.0%
CGATACGACACCGACACATT+TGG + chr5_2:23235877-23235896 Msa0763830:intron 50.0%
GGCGGTCTGACAGATTTCAA+CGG - chr5_2:23236347-23236366 None:intergenic 50.0%
GGGAAGCTTCTTACCAATGC+TGG + chr5_2:23236425-23236444 Msa0763830:CDS 50.0%
GAAGGAGGCTCGTCTTCATT+TGG - chr5_2:23236578-23236597 None:intergenic 50.0%
GCGCTCTATTATGGATGGGA+AGG + chr5_2:23236686-23236705 Msa0763830:CDS 50.0%
!! ATTTGGTGCAGTGCAGGAAC+AGG + chr5_2:23237015-23237034 Msa0763830:CDS 50.0%
AGTGCAGGAACAGGATGAGA+AGG + chr5_2:23237024-23237043 Msa0763830:CDS 50.0%
! TGCCAAATTTTCAGTCGCCC+TGG + chr5_2:23237286-23237305 Msa0763830:three_prime_UTR 50.0%
CACCAGGGCGACTGAAAATT+TGG - chr5_2:23237291-23237310 None:intergenic 50.0%
AGCAGGCCAAAACTTGTGGC+AGG + chr5_2:23230131-23230150 Msa0763830:CDS 55.0%
CTTGTGGCAGGATCTGCTGA+AGG + chr5_2:23230143-23230162 Msa0763830:CDS 55.0%
GCTAGGATGAACCACCCGAA+GGG + chr5_2:23230200-23230219 Msa0763830:CDS 55.0%
CTAGGATGAACCACCCGAAG+GGG + chr5_2:23230201-23230220 Msa0763830:CDS 55.0%
CAACAGTAATCCCCTTCGGG+TGG - chr5_2:23230214-23230233 None:intergenic 55.0%
GGGGTTACGACAATTGCTGG+GGG + chr5_2:23230848-23230867 Msa0763830:intron 55.0%
GGGGAAAGTTAAGCCGTGGA+GGG + chr5_2:23230867-23230886 Msa0763830:CDS 55.0%
GGGAAAGTTAAGCCGTGGAG+GGG + chr5_2:23230868-23230887 Msa0763830:CDS 55.0%
GGAAAGTTAAGCCGTGGAGG+GGG + chr5_2:23230869-23230888 Msa0763830:CDS 55.0%
ACAGGGGGAATCAAGCCATC+AGG + chr5_2:23230981-23231000 Msa0763830:CDS 55.0%
CAGGGGGAATCAAGCCATCA+GGG + chr5_2:23230982-23231001 Msa0763830:CDS 55.0%
! AGCATGGAAGGCGTGTACCT+AGG - chr5_2:23231450-23231469 None:intergenic 55.0%
CCAACAGGGTTGGGATCCAA+TGG - chr5_2:23231714-23231733 None:intergenic 55.0%
CCATTGGATCCCAACCCTGT+TGG + chr5_2:23231711-23231730 Msa0763830:CDS 55.0%
! AGCATGGAAGGCGTGTACCT+AGG - chr5_2:23231450-23231469 None:intergenic 55.0%
CCAACAGGGTTGGGATCCAA+TGG - chr5_2:23231714-23231733 None:intergenic 55.0%
CCATTGGATCCCAACCCTGT+TGG + chr5_2:23231711-23231730 Msa0763830:CDS 55.0%
GGTGGTGCATTGAAAACCGC+TGG - chr5_2:23234530-23234549 None:intergenic 55.0%
! GATAAAAGGCACGGCACCTG+TGG - chr5_2:23235305-23235324 None:intergenic 55.0%
!! CTTCTCGGTGCTGGCTTCTT+TGG + chr5_2:23235691-23235710 Msa0763830:intron 55.0%
TCCAGTGTTTGTGCCCGTGT+CGG + chr5_2:23235955-23235974 Msa0763830:intron 55.0%
GGCTAGGATGAACCACCCGA+AGG + chr5_2:23230199-23230218 Msa0763830:CDS 60.0%
GCTGGGGGAAAGTTAAGCCG+TGG + chr5_2:23230863-23230882 Msa0763830:CDS 60.0%
GGGGGAAAGTTAAGCCGTGG+AGG + chr5_2:23230866-23230885 Msa0763830:CDS 60.0%
GCGCAGCTGAATCTCCCTGA+TGG - chr5_2:23230999-23231018 None:intergenic 60.0%
ATATGACCCGTGCGGCAGCA+CGG + chr5_2:23235615-23235634 Msa0763830:intron 60.0%
! TTTTCACCCGTGCTGCCGCA+CGG - chr5_2:23235625-23235644 None:intergenic 60.0%
GACACCTCAGATGGCGTGTC+TGG + chr5_2:23235850-23235869 Msa0763830:intron 60.0%
GACACCAGACACGCCATCTG+AGG - chr5_2:23235857-23235876 None:intergenic 60.0%
ACCGACACGGGCACAAACAC+TGG - chr5_2:23235959-23235978 None:intergenic 60.0%
CACTACTGAGGCCCCAGCAT+TGG - chr5_2:23236441-23236460 None:intergenic 60.0%
CAATGCTGGGGCCTCAGTAG+TGG + chr5_2:23236439-23236458 Msa0763830:CDS 60.0%
CATCGACATGGCCCCCTCCA+CGG - chr5_2:23230883-23230902 None:intergenic 65.0%
TATGACCCGTGCGGCAGCAC+GGG + chr5_2:23235616-23235635 Msa0763830:intron 65.0%
TTTCACCCGTGCTGCCGCAC+GGG - chr5_2:23235624-23235643 None:intergenic 65.0%
CGTGGAGGGGGCCATGTCGA+TGG + chr5_2:23230881-23230900 Msa0763830:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 23229138 23237395 23229138 ID=Msa0763830;Name=Msa0763830
chr5_2 mRNA 23229138 23237395 23229138 ID=Msa0763830-mRNA-1;Parent=Msa0763830;Name=Msa0763830-mRNA-1;_AED=0.26;_eAED=0.26;_QI=238|0.6|0.54|1|1|1|11|257|583
chr5_2 exon 23229138 23229277 23229138 ID=Msa0763830-mRNA-1:exon:9547;Parent=Msa0763830-mRNA-1
chr5_2 exon 23229362 23229442 23229362 ID=Msa0763830-mRNA-1:exon:9548;Parent=Msa0763830-mRNA-1
chr5_2 exon 23229860 23230036 23229860 ID=Msa0763830-mRNA-1:exon:9549;Parent=Msa0763830-mRNA-1
chr5_2 exon 23230129 23230299 23230129 ID=Msa0763830-mRNA-1:exon:9550;Parent=Msa0763830-mRNA-1
chr5_2 exon 23230849 23231061 23230849 ID=Msa0763830-mRNA-1:exon:9551;Parent=Msa0763830-mRNA-1
chr5_2 exon 23231709 23231770 23231709 ID=Msa0763830-mRNA-1:exon:9552;Parent=Msa0763830-mRNA-1
chr5_2 exon 23231936 23232039 23231936 ID=Msa0763830-mRNA-1:exon:9553;Parent=Msa0763830-mRNA-1
chr5_2 exon 23232877 23232932 23232877 ID=Msa0763830-mRNA-1:exon:9554;Parent=Msa0763830-mRNA-1
chr5_2 exon 23233012 23233073 23233012 ID=Msa0763830-mRNA-1:exon:9555;Parent=Msa0763830-mRNA-1
chr5_2 exon 23233239 23233319 23233239 ID=Msa0763830-mRNA-1:exon:9556;Parent=Msa0763830-mRNA-1
chr5_2 exon 23236296 23237395 23236296 ID=Msa0763830-mRNA-1:exon:9557;Parent=Msa0763830-mRNA-1
chr5_2 five_prime_UTR 23229138 23229277 23229138 ID=Msa0763830-mRNA-1:five_prime_utr;Parent=Msa0763830-mRNA-1
chr5_2 five_prime_UTR 23229362 23229442 23229362 ID=Msa0763830-mRNA-1:five_prime_utr;Parent=Msa0763830-mRNA-1
chr5_2 five_prime_UTR 23229860 23229876 23229860 ID=Msa0763830-mRNA-1:five_prime_utr;Parent=Msa0763830-mRNA-1
chr5_2 CDS 23229877 23230036 23229877 ID=Msa0763830-mRNA-1:cds;Parent=Msa0763830-mRNA-1
chr5_2 CDS 23230129 23230299 23230129 ID=Msa0763830-mRNA-1:cds;Parent=Msa0763830-mRNA-1
chr5_2 CDS 23230849 23231061 23230849 ID=Msa0763830-mRNA-1:cds;Parent=Msa0763830-mRNA-1
chr5_2 CDS 23231709 23231770 23231709 ID=Msa0763830-mRNA-1:cds;Parent=Msa0763830-mRNA-1
chr5_2 CDS 23231936 23232039 23231936 ID=Msa0763830-mRNA-1:cds;Parent=Msa0763830-mRNA-1
chr5_2 CDS 23232877 23232932 23232877 ID=Msa0763830-mRNA-1:cds;Parent=Msa0763830-mRNA-1
chr5_2 CDS 23233012 23233073 23233012 ID=Msa0763830-mRNA-1:cds;Parent=Msa0763830-mRNA-1
chr5_2 CDS 23233239 23233319 23233239 ID=Msa0763830-mRNA-1:cds;Parent=Msa0763830-mRNA-1
chr5_2 CDS 23236296 23237138 23236296 ID=Msa0763830-mRNA-1:cds;Parent=Msa0763830-mRNA-1
chr5_2 three_prime_UTR 23237139 23237395 23237139 ID=Msa0763830-mRNA-1:three_prime_utr;Parent=Msa0763830-mRNA-1
Gene Sequence

>Msa0763830

ATGATGAAGTTTGAGAGTGGATACAATGTGGAAACTGTGTTTGATGGAAGCAAGCTTGGAATTGAGCCTTATGCAGTTGAGGTGTTGTCTAATGGGGAGCTTCTGATTCTGGATTCGGAGAATAGTAACATTTATAAGATTTCATCTTCACTTTCGTTGTATAGCAGGCCAAAACTTGTGGCAGGATCTGCTGAAGGATATTCTGGACACGTTGATGGAAAATTAAGAGAGGCTAGGATGAACCACCCGAAGGGGATTACTGTTGATGACCGAGGAAATATCTATGTTGCAGATATTATGAATATGGCAATTAGGAAAATTAGCGATTCAGGGGTTACGACAATTGCTGGGGGAAAGTTAAGCCGTGGAGGGGGCCATGTCGATGGACCAAGTGAAGAGGCTAAATTTTCTTATGACTTTGATGTGGTTTATGTTGGAAGTAGTTGTTCCCTACTTGTCATTGACAGGGGGAATCAAGCCATCAGGGAGATTCAGCTGCGCTTTGATGAGTGTGCCTATCAATACGAAAGTGGATTTCCACTCGCGCCATTGGATCCCAACCCTGTTGGTGATTTGATACGATGGTTAACAAGCTTTGCCGGAAATGAATTTGCTTACAATGGATTTTGTGAACTCGCAGTTGATATAAGGACTACTGCTTTGAGGTTGATGGATGACTGTGGGAAGGTAAGATTGCAGTCTCAGTTTTGTTGTGCCATGCCTAACAGAGATATCCAAACACTGCTATCATACCATTGCCTGTCTGCGCCATTGGATCCCAACCCTGTTGGTGATTTGATACGATGGTTAACAAGCTTTGCCGGAAATGAATTTGCTTACAATGGATTTTGTGAACTCGCAGTTGATATAAGGACTACTGCTTTGAGGTTGATGGATGACTGTGGGAAGGCTGAGAGCTCAGCGATGTCTGACTTTTCACCGAGTCTTTACCAAAAGCCGTTGAAATCTGTCAGACCGCCTTTGATTCCATCAGAAGACGAATCTTATAAGCAAGAAGAAGGTCTCTTTGCATCCATTGGGAAGCTTCTTACCAATGCTGGGGCCTCAGTAGTGGAAATAATGGGTTTCAGGAAAAAACCGCAAAGCTATGAATTTCAAAGCCAACCTTTATTCCATCAACCTGAAAGGCAAATAAATGCTTGGCCTGTGCAAGAAAGTTTTGTAATTCCAAATGAAGACGAGCCTCCTTCTATTGACCCAAGAACTCCAACCCCTAAGAAAACATATCCTTTCATGATTAAAGACACCGAAAAAATGCAACAATTGTGGCAAGGTAGAGCGCTCTATTATGGATGGGAAGGAGATCTTCAGCATCAGCAGCAGCAACCACTAAAACATGTGTACAATGGATGGGAAGGTGATCTTCATCAGCAGACGCAGCAACAACAACAGCAACCACAACAAAAACATCTGTATAACGGATGGGTCGGAGATCTTCAGAAGCAGCCGCAACAACAACAACAACAGCAACCACAACAAAAACATCTGTATAACGGATGGGACGGAGATCTTCAGCAGCAGCAAAAACATCATTATCGTAATCAGTATCATTCATCGGTCGCTCATACTTACTATGAGCAAAGTCGCGAGGAAACCAATGAGATAGTATTTGGTGCAGTGCAGGAACAGGATGAGAAGGAGTCTGTAGTTATCAAGCCTTTGGATTACGGTGATTCTCTCTATGATCATCATAATATGCGGTCTCGAATCAGTTATATCCACAAGTACTGA
Protein sequence

>Msa0763830

MMKFESGYNVETVFDGSKLGIEPYAVEVLSNGELLILDSENSNIYKISSSLSLYSRPKLVAGSAEGYSGHVDGKLREARMNHPKGITVDDRGNIYVADIMNMAIRKISDSGVTTIAGGKLSRGGGHVDGPSEEAKFSYDFDVVYVGSSCSLLVIDRGNQAIREIQLRFDECAYQYESGFPLAPLDPNPVGDLIRWLTSFAGNEFAYNGFCELAVDIRTTALRLMDDCGKVRLQSQFCCAMPNRDIQTLLSYHCLSAPLDPNPVGDLIRWLTSFAGNEFAYNGFCELAVDIRTTALRLMDDCGKAESSAMSDFSPSLYQKPLKSVRPPLIPSEDESYKQEEGLFASIGKLLTNAGASVVEIMGFRKKPQSYEFQSQPLFHQPERQINAWPVQESFVIPNEDEPPSIDPRTPTPKKTYPFMIKDTEKMQQLWQGRALYYGWEGDLQHQQQQPLKHVYNGWEGDLHQQTQQQQQQPQQKHLYNGWVGDLQKQPQQQQQQQPQQKHLYNGWDGDLQQQQKHHYRNQYHSSVAHTYYEQSREETNEIVFGAVQEQDEKESVVIKPLDYGDSLYDHHNMRSRISYIHKY*