Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0529680 | AES86345.1 | 73.239 | 71 | 9 | 1 | 8 | 68 | 1 | 71 | 5.50e-27 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0529680 | sp|Q96253|ATP5E_ARATH | 47.945 | 73 | 35 | 2 | 1 | 73 | 1 | 70 | 3.76e-18 | 73.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0529680 | G7JVK8 | 73.239 | 71 | 9 | 1 | 8 | 68 | 1 | 71 | 2.63e-27 | 103 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0529680 | 0.800703 | 1.272353e-48 | -8.615850e-47 |
| Msa0003780 | Msa0529680 | 0.801170 | 1.021413e-48 | -8.615850e-47 |
| Msa0006000 | Msa0529680 | 0.811590 | 6.488860e-51 | -8.615850e-47 |
| Msa0016670 | Msa0529680 | 0.838133 | 3.446461e-57 | -8.615850e-47 |
| Msa0017510 | Msa0529680 | 0.822930 | 1.819586e-53 | -8.615850e-47 |
| Msa0025730 | Msa0529680 | 0.819650 | 1.039237e-52 | -8.615850e-47 |
| Msa0027230 | Msa0529680 | 0.813305 | 2.737797e-51 | -8.615850e-47 |
| Msa0027260 | Msa0529680 | 0.858285 | 9.148894e-63 | -8.615850e-47 |
| Msa0032090 | Msa0529680 | 0.816609 | 5.062478e-52 | -8.615850e-47 |
| Msa0032260 | Msa0529680 | 0.836156 | 1.103670e-56 | -8.615850e-47 |
| Msa0032580 | Msa0529680 | 0.841761 | 3.904816e-58 | -8.615850e-47 |
| Msa0040690 | Msa0529680 | 0.848583 | 5.586352e-60 | -8.615850e-47 |
| Msa0048180 | Msa0529680 | 0.826532 | 2.576211e-54 | -8.615850e-47 |
| Msa0055180 | Msa0529680 | 0.818211 | 2.206685e-52 | -8.615850e-47 |
| Msa0073480 | Msa0529680 | 0.809370 | 1.956834e-50 | -8.615850e-47 |
| Msa0074320 | Msa0529680 | 0.846775 | 1.757621e-59 | -8.615850e-47 |
| Msa0075220 | Msa0529680 | 0.801914 | 7.192278e-49 | -8.615850e-47 |
| Msa0078650 | Msa0529680 | 0.800755 | 1.241854e-48 | -8.615850e-47 |
| Msa0079380 | Msa0529680 | 0.805991 | 1.021903e-49 | -8.615850e-47 |
| Msa0080200 | Msa0529680 | 0.812807 | 3.520295e-51 | -8.615850e-47 |
| Msa0089630 | Msa0529680 | 0.804122 | 2.513501e-49 | -8.615850e-47 |
| Msa0090520 | Msa0529680 | 0.805860 | 1.088793e-49 | -8.615850e-47 |
| Msa0094470 | Msa0529680 | 0.825093 | 5.656017e-54 | -8.615850e-47 |
| Msa0100740 | Msa0529680 | 0.835150 | 1.984158e-56 | -8.615850e-47 |
| Msa0110970 | Msa0529680 | 0.810823 | 9.514612e-51 | -8.615850e-47 |
| Msa0122970 | Msa0529680 | 0.804141 | 2.490654e-49 | -8.615850e-47 |
| Msa0124340 | Msa0529680 | 0.800111 | 1.680184e-48 | -8.615850e-47 |
| Msa0127310 | Msa0529680 | 0.825057 | 5.768139e-54 | -8.615850e-47 |
| Msa0128860 | Msa0529680 | 0.848327 | 6.579571e-60 | -8.615850e-47 |
| Msa0136070 | Msa0529680 | 0.808112 | 3.634280e-50 | -8.615850e-47 |
| Msa0137990 | Msa0529680 | 0.805058 | 1.603340e-49 | -8.615850e-47 |
| Msa0140820 | Msa0529680 | 0.829840 | 4.108955e-55 | -8.615850e-47 |
| Msa0143430 | Msa0529680 | 0.802534 | 5.359329e-49 | -8.615850e-47 |
| Msa0145440 | Msa0529680 | 0.813570 | 2.393697e-51 | -8.615850e-47 |
| Msa0157290 | Msa0529680 | 0.821790 | 3.348643e-53 | -8.615850e-47 |
| Msa0160550 | Msa0529680 | 0.815061 | 1.121209e-51 | -8.615850e-47 |
| Msa0168500 | Msa0529680 | 0.804230 | 2.386478e-49 | -8.615850e-47 |
| Msa0172070 | Msa0529680 | 0.800611 | 1.329002e-48 | -8.615850e-47 |
| Msa0172450 | Msa0529680 | 0.809151 | 2.180046e-50 | -8.615850e-47 |
| Msa0172970 | Msa0529680 | 0.836080 | 1.153573e-56 | -8.615850e-47 |
| Msa0174730 | Msa0529680 | 0.849603 | 2.908723e-60 | -8.615850e-47 |
| Msa0175780 | Msa0529680 | 0.811525 | 6.704080e-51 | -8.615850e-47 |
| Msa0182620 | Msa0529680 | -0.819085 | 1.397902e-52 | -8.615850e-47 |
| Msa0183900 | Msa0529680 | 0.813999 | 1.926365e-51 | -8.615850e-47 |
| Msa0186890 | Msa0529680 | 0.832760 | 7.866008e-56 | -8.615850e-47 |
| Msa0187690 | Msa0529680 | 0.845289 | 4.455772e-59 | -8.615850e-47 |
| Msa0187930 | Msa0529680 | 0.849131 | 3.936690e-60 | -8.615850e-47 |
| Msa0189290 | Msa0529680 | 0.806543 | 7.815172e-50 | -8.615850e-47 |
| Msa0193120 | Msa0529680 | 0.824704 | 6.986124e-54 | -8.615850e-47 |
| Msa0194540 | Msa0529680 | 0.853116 | 2.955409e-61 | -8.615850e-47 |
| Msa0199880 | Msa0529680 | 0.822276 | 2.583299e-53 | -8.615850e-47 |
| Msa0220720 | Msa0529680 | 0.851559 | 8.201603e-61 | -8.615850e-47 |
| Msa0227400 | Msa0529680 | 0.813570 | 2.394152e-51 | -8.615850e-47 |
| Msa0231650 | Msa0529680 | 0.807239 | 5.571101e-50 | -8.615850e-47 |
| Msa0231880 | Msa0529680 | 0.818425 | 1.973690e-52 | -8.615850e-47 |
| Msa0231980 | Msa0529680 | 0.802733 | 4.876386e-49 | -8.615850e-47 |
| Msa0366890 | Msa0529680 | 0.818356 | 2.045364e-52 | -8.615850e-47 |
| Msa0369050 | Msa0529680 | 0.840789 | 7.037087e-58 | -8.615850e-47 |
| Msa0369220 | Msa0529680 | 0.811616 | 6.405916e-51 | -8.615850e-47 |
| Msa0369450 | Msa0529680 | 0.817441 | 3.292691e-52 | -8.615850e-47 |
| Msa0376300 | Msa0529680 | 0.809173 | 2.157044e-50 | -8.615850e-47 |
| Msa0376310 | Msa0529680 | 0.815859 | 7.448565e-52 | -8.615850e-47 |
| Msa0385580 | Msa0529680 | 0.853920 | 1.736574e-61 | -8.615850e-47 |
| Msa0391030 | Msa0529680 | 0.805956 | 1.038939e-49 | -8.615850e-47 |
| Msa0395820 | Msa0529680 | 0.835021 | 2.138745e-56 | -8.615850e-47 |
| Msa0395960 | Msa0529680 | 0.800987 | 1.113364e-48 | -8.615850e-47 |
| Msa0398950 | Msa0529680 | 0.811132 | 8.155787e-51 | -8.615850e-47 |
| Msa0402330 | Msa0529680 | 0.809964 | 1.458332e-50 | -8.615850e-47 |
| Msa0402650 | Msa0529680 | 0.812136 | 4.934498e-51 | -8.615850e-47 |
| Msa0419820 | Msa0529680 | 0.808755 | 2.649844e-50 | -8.615850e-47 |
| Msa0425400 | Msa0529680 | 0.804324 | 2.281719e-49 | -8.615850e-47 |
| Msa0439200 | Msa0529680 | 0.804536 | 2.061273e-49 | -8.615850e-47 |
| Msa0471590 | Msa0529680 | 0.809028 | 2.316231e-50 | -8.615850e-47 |
| Msa0479660 | Msa0529680 | 0.811698 | 6.145475e-51 | -8.615850e-47 |
| Msa0242410 | Msa0529680 | 0.814678 | 1.363460e-51 | -8.615850e-47 |
| Msa0244780 | Msa0529680 | 0.842024 | 3.327636e-58 | -8.615850e-47 |
| Msa0257460 | Msa0529680 | 0.822774 | 1.978266e-53 | -8.615850e-47 |
| Msa0260240 | Msa0529680 | 0.801525 | 8.641578e-49 | -8.615850e-47 |
| Msa0262050 | Msa0529680 | 0.809750 | 1.621960e-50 | -8.615850e-47 |
| Msa0262310 | Msa0529680 | 0.830653 | 2.601486e-55 | -8.615850e-47 |
| Msa0264150 | Msa0529680 | 0.802086 | 6.629735e-49 | -8.615850e-47 |
| Msa0264570 | Msa0529680 | 0.829264 | 5.674535e-55 | -8.615850e-47 |
| Msa0268130 | Msa0529680 | 0.858213 | 9.612652e-63 | -8.615850e-47 |
| Msa0271530 | Msa0529680 | 0.821557 | 3.789541e-53 | -8.615850e-47 |
| Msa0279790 | Msa0529680 | 0.811609 | 6.427883e-51 | -8.615850e-47 |
| Msa0280610 | Msa0529680 | 0.838633 | 2.561731e-57 | -8.615850e-47 |
| Msa0292400 | Msa0529680 | 0.804381 | 2.219967e-49 | -8.615850e-47 |
| Msa0296740 | Msa0529680 | 0.816900 | 4.357177e-52 | -8.615850e-47 |
| Msa0298990 | Msa0529680 | 0.854229 | 1.414513e-61 | -8.615850e-47 |
| Msa0299870 | Msa0529680 | 0.846164 | 2.578659e-59 | -8.615850e-47 |
| Msa0300120 | Msa0529680 | 0.809154 | 2.177356e-50 | -8.615850e-47 |
| Msa0319850 | Msa0529680 | 0.800069 | 1.713002e-48 | -8.615850e-47 |
| Msa0337240 | Msa0529680 | 0.837041 | 6.568191e-57 | -8.615850e-47 |
| Msa0337620 | Msa0529680 | 0.809949 | 1.469359e-50 | -8.615850e-47 |
| Msa0337650 | Msa0529680 | 0.828419 | 9.083447e-55 | -8.615850e-47 |
| Msa0347770 | Msa0529680 | 0.802744 | 4.851589e-49 | -8.615850e-47 |
| Msa0355270 | Msa0529680 | 0.811956 | 5.400589e-51 | -8.615850e-47 |
| Msa0483860 | Msa0529680 | 0.807171 | 5.756928e-50 | -8.615850e-47 |
| Msa0491020 | Msa0529680 | 0.800074 | 1.708926e-48 | -8.615850e-47 |
| Msa0508590 | Msa0529680 | 0.835293 | 1.825816e-56 | -8.615850e-47 |
| Msa0508630 | Msa0529680 | 0.841839 | 3.725406e-58 | -8.615850e-47 |
| Msa0509390 | Msa0529680 | 0.817847 | 2.667164e-52 | -8.615850e-47 |
| Msa0526540 | Msa0529680 | 0.843167 | 1.654808e-58 | -8.615850e-47 |
| Msa0529680 | Msa0541860 | 0.835464 | 1.652542e-56 | -8.615850e-47 |
| Msa0529680 | Msa0547720 | 0.810811 | 9.574165e-51 | -8.615850e-47 |
| Msa0529680 | Msa0555450 | 0.802361 | 5.819169e-49 | -8.615850e-47 |
| Msa0529680 | Msa0565960 | 0.819663 | 1.031658e-52 | -8.615850e-47 |
| Msa0529680 | Msa0568820 | 0.805960 | 1.037055e-49 | -8.615850e-47 |
| Msa0529680 | Msa0569200 | 0.818792 | 1.629149e-52 | -8.615850e-47 |
| Msa0529680 | Msa0571920 | 0.800288 | 1.546353e-48 | -8.615850e-47 |
| Msa0529680 | Msa0576940 | 0.840655 | 7.630748e-58 | -8.615850e-47 |
| Msa0529680 | Msa0581070 | 0.817185 | 3.760214e-52 | -8.615850e-47 |
| Msa0529680 | Msa0588360 | 0.809989 | 1.440135e-50 | -8.615850e-47 |
| Msa0529680 | Msa0593650 | 0.820786 | 5.706998e-53 | -8.615850e-47 |
| Msa0529680 | Msa0601290 | 0.803270 | 3.776594e-49 | -8.615850e-47 |
| Msa0529680 | Msa0608320 | 0.800373 | 1.486055e-48 | -8.615850e-47 |
| Msa0529680 | Msa0615440 | 0.834270 | 3.303443e-56 | -8.615850e-47 |
| Msa0529680 | Msa0616020 | 0.821490 | 3.927635e-53 | -8.615850e-47 |
| Msa0529680 | Msa0619070 | 0.801511 | 8.697747e-49 | -8.615850e-47 |
| Msa0529680 | Msa0625070 | 0.874570 | 6.090167e-68 | -8.615850e-47 |
| Msa0529680 | Msa0625140 | 0.811496 | 6.801694e-51 | -8.615850e-47 |
| Msa0529680 | Msa0650020 | 0.815877 | 7.382311e-52 | -8.615850e-47 |
| Msa0529680 | Msa0650090 | 0.801188 | 1.012832e-48 | -8.615850e-47 |
| Msa0529680 | Msa0662500 | 0.819958 | 8.837016e-53 | -8.615850e-47 |
| Msa0529680 | Msa0677290 | 0.827645 | 1.395158e-54 | -8.615850e-47 |
| Msa0529680 | Msa0680240 | 0.819119 | 1.373083e-52 | -8.615850e-47 |
| Msa0529680 | Msa0682840 | 0.801379 | 9.256188e-49 | -8.615850e-47 |
| Msa0529680 | Msa0689260 | 0.819993 | 8.672838e-53 | -8.615850e-47 |
| Msa0529680 | Msa0690150 | 0.808292 | 3.326854e-50 | -8.615850e-47 |
| Msa0529680 | Msa0692080 | 0.814247 | 1.698023e-51 | -8.615850e-47 |
| Msa0529680 | Msa0692840 | 0.800552 | 1.365832e-48 | -8.615850e-47 |
| Msa0529680 | Msa0698060 | 0.809794 | 1.586736e-50 | -8.615850e-47 |
| Msa0529680 | Msa0698490 | 0.839272 | 1.750009e-57 | -8.615850e-47 |
| Msa0529680 | Msa0698660 | 0.842409 | 2.632630e-58 | -8.615850e-47 |
| Msa0529680 | Msa0703230 | 0.831967 | 1.236055e-55 | -8.615850e-47 |
| Msa0529680 | Msa0708520 | 0.832673 | 8.267717e-56 | -8.615850e-47 |
| Msa0529680 | Msa0709500 | 0.835206 | 1.920843e-56 | -8.615850e-47 |
| Msa0529680 | Msa0720820 | 0.829347 | 5.415535e-55 | -8.615850e-47 |
| Msa0529680 | Msa0722810 | 0.807522 | 4.851055e-50 | -8.615850e-47 |
| Msa0529680 | Msa0722960 | 0.809186 | 2.142503e-50 | -8.615850e-47 |
| Msa0529680 | Msa0734660 | 0.804860 | 1.763920e-49 | -8.615850e-47 |
| Msa0529680 | Msa0750880 | 0.844674 | 6.530697e-59 | -8.615850e-47 |
| Msa0529680 | Msa0755340 | 0.806763 | 7.024209e-50 | -8.615850e-47 |
| Msa0529680 | Msa0756260 | 0.805425 | 1.342970e-49 | -8.615850e-47 |
| Msa0529680 | Msa0761940 | 0.814188 | 1.749363e-51 | -8.615850e-47 |
| Msa0529680 | Msa0763830 | 0.815968 | 7.042263e-52 | -8.615850e-47 |
| Msa0529680 | Msa0783790 | 0.823329 | 1.469052e-53 | -8.615850e-47 |
| Msa0529680 | Msa0788850 | 0.804669 | 1.933715e-49 | -8.615850e-47 |
| Msa0529680 | Msa0790850 | 0.834698 | 2.578912e-56 | -8.615850e-47 |
| Msa0529680 | Msa0793800 | 0.802639 | 5.098700e-49 | -8.615850e-47 |
| Msa0529680 | Msa0794670 | 0.808614 | 2.840641e-50 | -8.615850e-47 |
| Msa0529680 | Msa0796530 | 0.824433 | 8.093015e-54 | -8.615850e-47 |
| Msa0529680 | Msa0803890 | 0.823604 | 1.266374e-53 | -8.615850e-47 |
| Msa0529680 | Msa0808270 | 0.820734 | 5.864535e-53 | -8.615850e-47 |
| Msa0529680 | Msa0813670 | 0.802027 | 6.815907e-49 | -8.615850e-47 |
| Msa0529680 | Msa0813720 | 0.812464 | 4.184990e-51 | -8.615850e-47 |
| Msa0529680 | Msa0813740 | 0.816176 | 6.329455e-52 | -8.615850e-47 |
| Msa0529680 | Msa0841940 | 0.835260 | 1.861244e-56 | -8.615850e-47 |
| Msa0529680 | Msa0850960 | 0.807136 | 5.857566e-50 | -8.615850e-47 |
| Msa0529680 | Msa0858770 | 0.804939 | 1.697719e-49 | -8.615850e-47 |
| Msa0529680 | Msa0871270 | 0.809356 | 1.970255e-50 | -8.615850e-47 |
| Msa0529680 | Msa0876200 | 0.816231 | 6.151934e-52 | -8.615850e-47 |
| Msa0529680 | Msa0878500 | 0.800151 | 1.648800e-48 | -8.615850e-47 |
| Msa0529680 | Msa0880140 | 0.823860 | 1.103007e-53 | -8.615850e-47 |
| Msa0529680 | Msa0902760 | 0.870439 | 1.457745e-66 | -8.615850e-47 |
| Msa0529680 | Msa0936340 | 0.814923 | 1.203049e-51 | -8.615850e-47 |
| Msa0529680 | Msa0944190 | 0.810752 | 9.858185e-51 | -8.615850e-47 |
| Msa0529680 | Msa0968590 | 0.849817 | 2.534741e-60 | -8.615850e-47 |
| Msa0529680 | Msa0970030 | 0.818639 | 1.764936e-52 | -8.615850e-47 |
| Msa0529680 | Msa0970420 | 0.810919 | 9.071566e-51 | -8.615850e-47 |
| Msa0529680 | Msa0989540 | 0.810410 | 1.168830e-50 | -8.615850e-47 |
| Msa0529680 | Msa1004550 | 0.804519 | 2.077377e-49 | -8.615850e-47 |
| Msa0529680 | Msa1004600 | 0.807743 | 4.354315e-50 | -8.615850e-47 |
| Msa0529680 | Msa1006840 | 0.848391 | 6.315539e-60 | -8.615850e-47 |
| Msa0529680 | Msa1012320 | 0.802016 | 6.851228e-49 | -8.615850e-47 |
| Msa0529680 | Msa1013400 | 0.875417 | 3.131560e-68 | -8.615850e-47 |
| Msa0529680 | Msa1019240 | 0.817673 | 2.919639e-52 | -8.615850e-47 |
| Msa0529680 | Msa1019260 | 0.824674 | 7.100861e-54 | -8.615850e-47 |
| Msa0529680 | Msa1040400 | 0.820374 | 7.095158e-53 | -8.615850e-47 |
| Msa0529680 | Msa1043690 | 0.812740 | 3.641337e-51 | -8.615850e-47 |
| Msa0529680 | Msa1055410 | 0.802739 | 4.862547e-49 | -8.615850e-47 |
| Msa0529680 | Msa1065390 | 0.807496 | 4.913401e-50 | -8.615850e-47 |
| Msa0529680 | Msa1066490 | 0.841019 | 6.124750e-58 | -8.615850e-47 |
| Msa0529680 | Msa1081150 | 0.856944 | 2.283908e-62 | -8.615850e-47 |
| Msa0529680 | Msa1081930 | 0.804948 | 1.690490e-49 | -8.615850e-47 |
| Msa0529680 | Msa1082700 | 0.808608 | 2.848970e-50 | -8.615850e-47 |
| Msa0529680 | Msa1084470 | 0.826512 | 2.604654e-54 | -8.615850e-47 |
| Msa0529680 | Msa1087710 | 0.807919 | 3.995979e-50 | -8.615850e-47 |
| Msa0529680 | Msa1091530 | 0.803460 | 3.449464e-49 | -8.615850e-47 |
| Msa0529680 | Msa1093530 | 0.871573 | 6.166968e-67 | -8.615850e-47 |
| Msa0529680 | Msa1104140 | 0.860554 | 1.904381e-63 | -8.615850e-47 |
| Msa0529680 | Msa1104210 | 0.832727 | 8.013821e-56 | -8.615850e-47 |
| Msa0529680 | Msa1106700 | 0.815488 | 9.010372e-52 | -8.615850e-47 |
| Msa0529680 | Msa1121440 | 0.800686 | 1.283050e-48 | -8.615850e-47 |
| Msa0529680 | Msa1123380 | 0.806824 | 6.818524e-50 | -8.615850e-47 |
| Msa0529680 | Msa1124110 | 0.808866 | 2.508544e-50 | -8.615850e-47 |
| Msa0529680 | Msa1125760 | 0.823637 | 1.244340e-53 | -8.615850e-47 |
| Msa0529680 | Msa1126510 | 0.862266 | 5.722985e-64 | -8.615850e-47 |
| Msa0529680 | Msa1126770 | 0.839580 | 1.455084e-57 | -8.615850e-47 |
| Msa0529680 | Msa1127890 | 0.833813 | 4.299484e-56 | -8.615850e-47 |
| Msa0529680 | Msa1134110 | 0.832880 | 7.341438e-56 | -8.615850e-47 |
| Msa0529680 | Msa1135470 | 0.809463 | 1.869229e-50 | -8.615850e-47 |
| Msa0529680 | Msa1139810 | 0.802142 | 6.455309e-49 | -8.615850e-47 |
| Msa0529680 | Msa1147900 | 0.812690 | 3.734299e-51 | -8.615850e-47 |
| Msa0529680 | Msa1165870 | 0.803523 | 3.346766e-49 | -8.615850e-47 |
| Msa0529680 | Msa1165940 | 0.805323 | 1.411119e-49 | -8.615850e-47 |
| Msa0529680 | Msa1166860 | 0.857810 | 1.266611e-62 | -8.615850e-47 |
| Msa0529680 | Msa1171360 | 0.835275 | 1.844630e-56 | -8.615850e-47 |
| Msa0529680 | Msa1181850 | 0.817723 | 2.843824e-52 | -8.615850e-47 |
| Msa0529680 | Msa1181860 | 0.818854 | 1.577162e-52 | -8.615850e-47 |
| Msa0529680 | Msa1187840 | 0.849332 | 3.461150e-60 | -8.615850e-47 |
| Msa0529680 | Msa1201650 | 0.808344 | 3.244195e-50 | -8.615850e-47 |
| Msa0529680 | Msa1207270 | 0.855449 | 6.261256e-62 | -8.615850e-47 |
| Msa0529680 | Msa1209460 | 0.823042 | 1.713361e-53 | -8.615850e-47 |
| Msa0529680 | Msa1218600 | 0.852992 | 3.207866e-61 | -8.615850e-47 |
| Msa0529680 | Msa1225700 | 0.801231 | 9.925784e-49 | -8.615850e-47 |
| Msa0529680 | Msa1237940 | 0.809337 | 1.989028e-50 | -8.615850e-47 |
| Msa0529680 | Msa1251160 | 0.808561 | 2.915488e-50 | -8.615850e-47 |
| Msa0529680 | Msa1254610 | 0.834243 | 3.354368e-56 | -8.615850e-47 |
| Msa0529680 | Msa1255040 | -0.805995 | 1.019538e-49 | -8.615850e-47 |
| Msa0529680 | Msa1257510 | 0.832745 | 7.933999e-56 | -8.615850e-47 |
| Msa0529680 | Msa1265630 | 0.801703 | 7.946396e-49 | -8.615850e-47 |
| Msa0529680 | Msa1271990 | 0.803010 | 4.274337e-49 | -8.615850e-47 |
| Msa0529680 | Msa1275360 | 0.804178 | 2.446911e-49 | -8.615850e-47 |
| Msa0529680 | Msa1281190 | 0.805349 | 1.393129e-49 | -8.615850e-47 |
| Msa0529680 | Msa1283170 | 0.850986 | 1.190613e-60 | -8.615850e-47 |
| Msa0529680 | Msa1292830 | 0.821904 | 3.151108e-53 | -8.615850e-47 |
| Msa0529680 | Msa1303250 | 0.804166 | 2.460706e-49 | -8.615850e-47 |
| Msa0529680 | Msa1307950 | 0.817082 | 3.964485e-52 | -8.615850e-47 |
| Msa0529680 | Msa1316780 | 0.840564 | 8.060671e-58 | -8.615850e-47 |
| Msa0529680 | Msa1316830 | 0.841418 | 4.809395e-58 | -8.615850e-47 |
| Msa0529680 | Msa1335940 | 0.800517 | 1.388768e-48 | -8.615850e-47 |
| Msa0529680 | Msa1341070 | 0.800625 | 1.320323e-48 | -8.615850e-47 |
| Msa0529680 | Msa1353060 | 0.840742 | 7.238931e-58 | -8.615850e-47 |
| Msa0529680 | Msa1353330 | 0.801110 | 1.050956e-48 | -8.615850e-47 |
| Msa0529680 | Msa1356440 | 0.811645 | 6.312304e-51 | -8.615850e-47 |
| Msa0529680 | Msa1358250 | 0.821201 | 4.578325e-53 | -8.615850e-47 |
| Msa0529680 | Msa1363330 | 0.847489 | 1.119472e-59 | -8.615850e-47 |
| Msa0529680 | Msa1374120 | 0.843543 | 1.313320e-58 | -8.615850e-47 |
| Msa0529680 | Msa1375560 | 0.812272 | 4.609169e-51 | -8.615850e-47 |
| Msa0529680 | Msa1379760 | 0.848735 | 5.070037e-60 | -8.615850e-47 |
| Msa0529680 | Msa1382560 | 0.809892 | 1.511634e-50 | -8.615850e-47 |
| Msa0529680 | Msa1382620 | 0.836006 | 1.204985e-56 | -8.615850e-47 |
| Msa0529680 | Msa1386600 | 0.847356 | 1.217696e-59 | -8.615850e-47 |
| Msa0529680 | Msa1386780 | 0.807688 | 4.472147e-50 | -8.615850e-47 |
| Msa0529680 | Msa1394290 | 0.834037 | 3.778013e-56 | -8.615850e-47 |
| Msa0529680 | Msa1407460 | 0.804005 | 2.658625e-49 | -8.615850e-47 |
| Msa0529680 | Msa1414490 | 0.907288 | 5.958786e-81 | -8.615850e-47 |
| Msa0529680 | Msa1423350 | 0.807055 | 6.092333e-50 | -8.615850e-47 |
| Msa0529680 | Msa1432700 | 0.862258 | 5.757088e-64 | -8.615850e-47 |
| Msa0529680 | Msa1444310 | 0.818147 | 2.281256e-52 | -8.615850e-47 |
| Msa0529680 | Msa1448690 | 0.850452 | 1.682226e-60 | -8.615850e-47 |
| Msa0529680 | Msa1457910 | 0.803909 | 2.782937e-49 | -8.615850e-47 |
| Msa0529680 | Msa1457920 | 0.830684 | 2.557150e-55 | -8.615850e-47 |
| Msa0529680 | Msa1464830 | 0.803999 | 2.666031e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0529680 | MtrunA17_Chr4g0000551 | 73.239 | 71 | 9 | 1 | 8 | 68 | 1 | 71 | 5.06e-31 | 103 |
| Msa0529680 | MtrunA17_Chr5g0417121 | 56.164 | 73 | 29 | 2 | 1 | 73 | 1 | 70 | 1.24e-23 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0529680 | AT1G51650.1 | 47.945 | 73 | 35 | 2 | 1 | 73 | 1 | 70 | 3.82e-19 | 73.9 |
Find 19 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGACAGCCAATCTTATT+AGG | 0.245215 | 4_1:-3412802 | Msa0529680:CDS |
| CGACGTCGTCTTGATTCCTC+TGG | 0.371709 | 4_1:+3410541 | None:intergenic |
| GCAGAGGAAAAGTAGCGATT+TGG | 0.379656 | 4_1:-3412859 | Msa0529680:CDS |
| CACATGGATCGACAGTATTC+CGG | 0.387356 | 4_1:-3412708 | Msa0529680:CDS |
| AAGGCAATTCCTAATAAGAT+TGG | 0.392366 | 4_1:+3412793 | None:intergenic |
| TCTTATTAGGAATTGCCTTA+AGG | 0.405336 | 4_1:-3412789 | Msa0529680:CDS |
| GTAGCGATTTGGAGAGCAGC+AGG | 0.448954 | 4_1:-3412848 | Msa0529680:CDS |
| AATAAGATTGGCTGTCAAGT+TGG | 0.465236 | 4_1:+3412805 | None:intergenic |
| GTAACGAAAACAAGTGTAAG+AGG | 0.479461 | 4_1:-3412934 | Msa0529680:five_prime_UTR |
| CGATCAATGGCGTCAGGCAG+AGG | 0.495109 | 4_1:-3412875 | Msa0529680:exon |
| GATAATCGATCAATGGCGTC+AGG | 0.508621 | 4_1:-3412881 | Msa0529680:exon |
| CGTATCAGATAATCGATCAA+TGG | 0.522049 | 4_1:-3412888 | Msa0529680:exon |
| TCGCTGAAACGCATTCATGA+TGG | 0.530943 | 4_1:-3410521 | None:intergenic |
| TTCAGTACTTGCTTCCCACA+TGG | 0.547985 | 4_1:-3412724 | Msa0529680:CDS |
| GACGTCGTCTTGATTCCTCT+GGG | 0.578095 | 4_1:+3410542 | None:intergenic |
| CGGAATACTGTCGATCCATG+TGG | 0.617541 | 4_1:+3412709 | None:intergenic |
| GGAATACTGTCGATCCATGT+GGG | 0.618997 | 4_1:+3412710 | None:intergenic |
| TAGCGATTTGGAGAGCAGCA+GGG | 0.642009 | 4_1:-3412847 | Msa0529680:CDS |
| CATTCATACAGACATCCCAG+AGG | 0.796801 | 4_1:-3410557 | Msa0529680:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCATTTTCTTAAGTTATTA+CGG | - | chr4_1:3411258-3411277 | Msa0529680:intron | 15.0% |
| !!! | ATTGTTTTCATTATTATTAG+TGG | - | chr4_1:3411533-3411552 | Msa0529680:intron | 15.0% |
| !!! | ATTTTTCTTTGGAAAATAAT+TGG | - | chr4_1:3412269-3412288 | Msa0529680:intron | 15.0% |
| !!! | ATTTGAATGTGTTTTTTAAA+GGG | + | chr4_1:3412389-3412408 | None:intergenic | 15.0% |
| !! | TATACAAAACTAAATAAACT+TGG | + | chr4_1:3412845-3412864 | None:intergenic | 15.0% |
| !!! | TTCATTTTCTTAAGTTATTA+CGG | - | chr4_1:3411258-3411277 | Msa0529680:intron | 15.0% |
| !!! | ATTGTTTTCATTATTATTAG+TGG | - | chr4_1:3411533-3411552 | Msa0529680:intron | 15.0% |
| !!! | ATTTTTCTTTGGAAAATAAT+TGG | - | chr4_1:3412269-3412288 | Msa0529680:intron | 15.0% |
| !!! | ATTTGAATGTGTTTTTTAAA+GGG | + | chr4_1:3412389-3412408 | None:intergenic | 15.0% |
| !! | TATACAAAACTAAATAAACT+TGG | + | chr4_1:3412845-3412864 | None:intergenic | 15.0% |
| !!! | TTTTTTTCTTTCTAAGAACT+CGG | + | chr4_1:3410938-3410957 | None:intergenic | 20.0% |
| !! | CCTATCATCTTAATTAATTA+GGG | + | chr4_1:3411126-3411145 | None:intergenic | 20.0% |
| !! | CCTAATTAATTAAGATGATA+GGG | - | chr4_1:3411124-3411143 | Msa0529680:intron | 20.0% |
| !!! | TCATTTTCTTAAGTTATTAC+GGG | - | chr4_1:3411259-3411278 | Msa0529680:intron | 20.0% |
| !!! | ATTTTGTCTCAAAAATATCA+TGG | + | chr4_1:3411669-3411688 | None:intergenic | 20.0% |
| !!! | CAATTTAGTCTAAAATATCA+TGG | + | chr4_1:3411789-3411808 | None:intergenic | 20.0% |
| !!! | ATATTTTAGACTAAATTGAG+AGG | - | chr4_1:3411791-3411810 | Msa0529680:intron | 20.0% |
| !! | TCAATTAAACAGAAATGAAA+TGG | + | chr4_1:3412029-3412048 | None:intergenic | 20.0% |
| !! | TTCATTTCTGTTTAATTGAT+TGG | - | chr4_1:3412030-3412049 | Msa0529680:intron | 20.0% |
| !!! | TTTTGGTAAAGATTTTTCTT+TGG | - | chr4_1:3412258-3412277 | Msa0529680:intron | 20.0% |
| !!! | AGAATTTTATCGCTTTTAAT+CGG | + | chr4_1:3412316-3412335 | None:intergenic | 20.0% |
| !!! | CATTTGAATGTGTTTTTTAA+AGG | + | chr4_1:3412390-3412409 | None:intergenic | 20.0% |
| !!! | TTTAATGTGATGTTTTCATT+AGG | - | chr4_1:3412535-3412554 | Msa0529680:intron | 20.0% |
| !!! | TTTTTTTCTTTCTAAGAACT+CGG | + | chr4_1:3410938-3410957 | None:intergenic | 20.0% |
| !! | CCTATCATCTTAATTAATTA+GGG | + | chr4_1:3411126-3411145 | None:intergenic | 20.0% |
| !! | CCTAATTAATTAAGATGATA+GGG | - | chr4_1:3411124-3411143 | Msa0529680:intron | 20.0% |
| !!! | TCATTTTCTTAAGTTATTAC+GGG | - | chr4_1:3411259-3411278 | Msa0529680:intron | 20.0% |
| !!! | ATTTTGTCTCAAAAATATCA+TGG | + | chr4_1:3411669-3411688 | None:intergenic | 20.0% |
| !!! | CAATTTAGTCTAAAATATCA+TGG | + | chr4_1:3411789-3411808 | None:intergenic | 20.0% |
| !!! | ATATTTTAGACTAAATTGAG+AGG | - | chr4_1:3411791-3411810 | Msa0529680:intron | 20.0% |
| !! | TCAATTAAACAGAAATGAAA+TGG | + | chr4_1:3412029-3412048 | None:intergenic | 20.0% |
| !! | TTCATTTCTGTTTAATTGAT+TGG | - | chr4_1:3412030-3412049 | Msa0529680:intron | 20.0% |
| !!! | TTTTGGTAAAGATTTTTCTT+TGG | - | chr4_1:3412258-3412277 | Msa0529680:intron | 20.0% |
| !!! | AGAATTTTATCGCTTTTAAT+CGG | + | chr4_1:3412316-3412335 | None:intergenic | 20.0% |
| !!! | CATTTGAATGTGTTTTTTAA+AGG | + | chr4_1:3412390-3412409 | None:intergenic | 20.0% |
| !!! | TTTAATGTGATGTTTTCATT+AGG | - | chr4_1:3412535-3412554 | Msa0529680:intron | 20.0% |
| ! | CCATAATGTTAACTTTCTTA+GGG | - | chr4_1:3411031-3411050 | Msa0529680:intron | 25.0% |
| ! | CCCTAATTAATTAAGATGAT+AGG | - | chr4_1:3411123-3411142 | Msa0529680:intron | 25.0% |
| ! | CCCTATCATCTTAATTAATT+AGG | + | chr4_1:3411127-3411146 | None:intergenic | 25.0% |
| !!! | GAACACATTTTTTAGATTGA+AGG | - | chr4_1:3411164-3411183 | Msa0529680:intron | 25.0% |
| ! | AGATGATTTAGAAACTACTT+TGG | - | chr4_1:3411354-3411373 | Msa0529680:intron | 25.0% |
| !!! | CATTTTCATTGATTTCTGAA+AGG | + | chr4_1:3411505-3411524 | None:intergenic | 25.0% |
| ! | TCATTTAATTACCTAACTTG+TGG | - | chr4_1:3411864-3411883 | Msa0529680:intron | 25.0% |
| ! | TTTGTGCTTTATGAAGAAAA+GGG | + | chr4_1:3411939-3411958 | None:intergenic | 25.0% |
| !! | TTTTGTGCTTTATGAAGAAA+AGG | + | chr4_1:3411940-3411959 | None:intergenic | 25.0% |
| !!! | CTTTTTCAAACTTTTGTCAT+TGG | - | chr4_1:3412072-3412091 | Msa0529680:intron | 25.0% |
| !!! | CAATGAGTTTTGCTTTAAAT+TGG | - | chr4_1:3412336-3412355 | Msa0529680:intron | 25.0% |
| ! | ATTTCACTTCGAATCATAAT+TGG | - | chr4_1:3412433-3412452 | Msa0529680:intron | 25.0% |
| ! | TATTGATCTTAATCAGTTTG+AGG | + | chr4_1:3412472-3412491 | None:intergenic | 25.0% |
| ! | ATGAAAACATCACATTAAAG+TGG | + | chr4_1:3412534-3412553 | None:intergenic | 25.0% |
| ! | CCATAATGTTAACTTTCTTA+GGG | - | chr4_1:3411031-3411050 | Msa0529680:intron | 25.0% |
| ! | CCCTAATTAATTAAGATGAT+AGG | - | chr4_1:3411123-3411142 | Msa0529680:intron | 25.0% |
| ! | CCCTATCATCTTAATTAATT+AGG | + | chr4_1:3411127-3411146 | None:intergenic | 25.0% |
| !!! | GAACACATTTTTTAGATTGA+AGG | - | chr4_1:3411164-3411183 | Msa0529680:intron | 25.0% |
| ! | AGATGATTTAGAAACTACTT+TGG | - | chr4_1:3411354-3411373 | Msa0529680:intron | 25.0% |
| !!! | CATTTTCATTGATTTCTGAA+AGG | + | chr4_1:3411505-3411524 | None:intergenic | 25.0% |
| ! | TCATTTAATTACCTAACTTG+TGG | - | chr4_1:3411864-3411883 | Msa0529680:intron | 25.0% |
| ! | TTTGTGCTTTATGAAGAAAA+GGG | + | chr4_1:3411939-3411958 | None:intergenic | 25.0% |
| !! | TTTTGTGCTTTATGAAGAAA+AGG | + | chr4_1:3411940-3411959 | None:intergenic | 25.0% |
| !!! | CTTTTTCAAACTTTTGTCAT+TGG | - | chr4_1:3412072-3412091 | Msa0529680:intron | 25.0% |
| !!! | CAATGAGTTTTGCTTTAAAT+TGG | - | chr4_1:3412336-3412355 | Msa0529680:intron | 25.0% |
| ! | ATTTCACTTCGAATCATAAT+TGG | - | chr4_1:3412433-3412452 | Msa0529680:intron | 25.0% |
| ! | TATTGATCTTAATCAGTTTG+AGG | + | chr4_1:3412472-3412491 | None:intergenic | 25.0% |
| ! | ATGAAAACATCACATTAAAG+TGG | + | chr4_1:3412534-3412553 | None:intergenic | 25.0% |
| AAGGCAATTCCTAATAAGAT+TGG | + | chr4_1:3410679-3410698 | None:intergenic | 30.0% | |
| TCTTATTAGGAATTGCCTTA+AGG | - | chr4_1:3410680-3410699 | Msa0529680:intron | 30.0% | |
| GGTTTCAAACTATTGAGTAT+TGG | - | chr4_1:3410879-3410898 | Msa0529680:intron | 30.0% | |
| GCCATAATGTTAACTTTCTT+AGG | - | chr4_1:3411030-3411049 | Msa0529680:intron | 30.0% | |
| CCCTAAGAAAGTTAACATTA+TGG | + | chr4_1:3411034-3411053 | None:intergenic | 30.0% | |
| ! | CAAGCTTTGTAGAAACAAAT+GGG | + | chr4_1:3411071-3411090 | None:intergenic | 30.0% |
| ! | TCAAGCTTTGTAGAAACAAA+TGG | + | chr4_1:3411072-3411091 | None:intergenic | 30.0% |
| !! | ATTTGTTTCTACAAAGCTTG+AGG | - | chr4_1:3411071-3411090 | Msa0529680:intron | 30.0% |
| !! | TTTGTTTCTACAAAGCTTGA+GGG | - | chr4_1:3411072-3411091 | Msa0529680:intron | 30.0% |
| CTGTAGTATCTTGTCTATAT+CGG | - | chr4_1:3411294-3411313 | Msa0529680:intron | 30.0% | |
| GAAGATAAAAATGCTAGCTA+GGG | + | chr4_1:3411570-3411589 | None:intergenic | 30.0% | |
| AGAAGATAAAAATGCTAGCT+AGG | + | chr4_1:3411571-3411590 | None:intergenic | 30.0% | |
| ! | GAGAGGTTATTCTAAAGAAA+TGG | - | chr4_1:3411808-3411827 | Msa0529680:intron | 30.0% |
| AAAGGATTATCTCAGAACAT+GGG | + | chr4_1:3411963-3411982 | None:intergenic | 30.0% | |
| AAAAGGATTATCTCAGAACA+TGG | + | chr4_1:3411964-3411983 | None:intergenic | 30.0% | |
| ! | GATAATCCTTTTCTGTTTAG+TGG | - | chr4_1:3411972-3411991 | Msa0529680:intron | 30.0% |
| !!! | CTTTTAATCGGTTTGAAGTT+TGG | + | chr4_1:3412304-3412323 | None:intergenic | 30.0% |
| ! | AAATGACACTTACGTGATTT+TGG | - | chr4_1:3412405-3412424 | Msa0529680:intron | 30.0% |
| ! | ATCTTAATCAGTTTGAGGTT+TGG | + | chr4_1:3412467-3412486 | None:intergenic | 30.0% |
| ! | CCAATTTGAAGTAAAACTCA+AGG | + | chr4_1:3412503-3412522 | None:intergenic | 30.0% |
| ! | CCTTGAGTTTTACTTCAAAT+TGG | - | chr4_1:3412500-3412519 | Msa0529680:intron | 30.0% |
| !!! | TACAAGTGTACCTCTTTTTT+TGG | + | chr4_1:3412687-3412706 | None:intergenic | 30.0% |
| ! | TAAAAGAGGTACACTTGTTA+AGG | - | chr4_1:3412705-3412724 | Msa0529680:CDS | 30.0% |
| TTAAGGATCTAAGGAGAAAA+GGG | - | chr4_1:3412722-3412741 | Msa0529680:CDS | 30.0% | |
| AAGGCAATTCCTAATAAGAT+TGG | + | chr4_1:3410679-3410698 | None:intergenic | 30.0% | |
| TCTTATTAGGAATTGCCTTA+AGG | - | chr4_1:3410680-3410699 | Msa0529680:intron | 30.0% | |
| GGTTTCAAACTATTGAGTAT+TGG | - | chr4_1:3410879-3410898 | Msa0529680:intron | 30.0% | |
| GCCATAATGTTAACTTTCTT+AGG | - | chr4_1:3411030-3411049 | Msa0529680:intron | 30.0% | |
| CCCTAAGAAAGTTAACATTA+TGG | + | chr4_1:3411034-3411053 | None:intergenic | 30.0% | |
| ! | CAAGCTTTGTAGAAACAAAT+GGG | + | chr4_1:3411071-3411090 | None:intergenic | 30.0% |
| ! | TCAAGCTTTGTAGAAACAAA+TGG | + | chr4_1:3411072-3411091 | None:intergenic | 30.0% |
| !! | ATTTGTTTCTACAAAGCTTG+AGG | - | chr4_1:3411071-3411090 | Msa0529680:intron | 30.0% |
| !! | TTTGTTTCTACAAAGCTTGA+GGG | - | chr4_1:3411072-3411091 | Msa0529680:intron | 30.0% |
| CTGTAGTATCTTGTCTATAT+CGG | - | chr4_1:3411294-3411313 | Msa0529680:intron | 30.0% | |
| GAAGATAAAAATGCTAGCTA+GGG | + | chr4_1:3411570-3411589 | None:intergenic | 30.0% | |
| AGAAGATAAAAATGCTAGCT+AGG | + | chr4_1:3411571-3411590 | None:intergenic | 30.0% | |
| ! | GAGAGGTTATTCTAAAGAAA+TGG | - | chr4_1:3411808-3411827 | Msa0529680:intron | 30.0% |
| AAAGGATTATCTCAGAACAT+GGG | + | chr4_1:3411963-3411982 | None:intergenic | 30.0% | |
| AAAAGGATTATCTCAGAACA+TGG | + | chr4_1:3411964-3411983 | None:intergenic | 30.0% | |
| ! | GATAATCCTTTTCTGTTTAG+TGG | - | chr4_1:3411972-3411991 | Msa0529680:intron | 30.0% |
| !!! | CTTTTAATCGGTTTGAAGTT+TGG | + | chr4_1:3412304-3412323 | None:intergenic | 30.0% |
| ! | AAATGACACTTACGTGATTT+TGG | - | chr4_1:3412405-3412424 | Msa0529680:intron | 30.0% |
| ! | ATCTTAATCAGTTTGAGGTT+TGG | + | chr4_1:3412467-3412486 | None:intergenic | 30.0% |
| ! | CCAATTTGAAGTAAAACTCA+AGG | + | chr4_1:3412503-3412522 | None:intergenic | 30.0% |
| ! | CCTTGAGTTTTACTTCAAAT+TGG | - | chr4_1:3412500-3412519 | Msa0529680:intron | 30.0% |
| !!! | TACAAGTGTACCTCTTTTTT+TGG | + | chr4_1:3412687-3412706 | None:intergenic | 30.0% |
| ! | TAAAAGAGGTACACTTGTTA+AGG | - | chr4_1:3412705-3412724 | Msa0529680:CDS | 30.0% |
| TTAAGGATCTAAGGAGAAAA+GGG | - | chr4_1:3412722-3412741 | Msa0529680:CDS | 30.0% | |
| GTAACGAAAACAAGTGTAAG+AGG | - | chr4_1:3410535-3410554 | Msa0529680:CDS | 35.0% | |
| CGTATCAGATAATCGATCAA+TGG | - | chr4_1:3410581-3410600 | Msa0529680:intron | 35.0% | |
| ! | AATAAGATTGGCTGTCAAGT+TGG | + | chr4_1:3410667-3410686 | None:intergenic | 35.0% |
| ACTTGACAGCCAATCTTATT+AGG | - | chr4_1:3410667-3410686 | Msa0529680:intron | 35.0% | |
| !! | GAGAGAATTTGAGTTTTGTG+AGG | + | chr4_1:3410708-3410727 | None:intergenic | 35.0% |
| GCTTAAACAATGTCTCTTGT+TGG | - | chr4_1:3410990-3411009 | Msa0529680:intron | 35.0% | |
| TCTTGTTGGAACTTGAGTTT+GGG | - | chr4_1:3411004-3411023 | Msa0529680:intron | 35.0% | |
| !! | TTTTAGATTGAAGGTGTGAG+TGG | - | chr4_1:3411173-3411192 | Msa0529680:intron | 35.0% |
| !! | AACCACATATTTTGTTGTGC+CGG | + | chr4_1:3411225-3411244 | None:intergenic | 35.0% |
| CATCTCAAAATTTGTCCCAT+AGG | + | chr4_1:3411339-3411358 | None:intergenic | 35.0% | |
| ! | ACTACTTTGGAGAGAAATTG+AGG | - | chr4_1:3411367-3411386 | Msa0529680:intron | 35.0% |
| ! | CTACTTTGGAGAGAAATTGA+GGG | - | chr4_1:3411368-3411387 | Msa0529680:intron | 35.0% |
| AATACTCCACTTCACTTCAT+CGG | + | chr4_1:3411476-3411495 | None:intergenic | 35.0% | |
| ! | TTCTAAAGAAATGGTGAGTG+TGG | - | chr4_1:3411817-3411836 | Msa0529680:intron | 35.0% |
| TCATTGCCACTAAACAGAAA+AGG | + | chr4_1:3411981-3412000 | None:intergenic | 35.0% | |
| AGAAATGAAATGGAAACGCA+GGG | + | chr4_1:3412019-3412038 | None:intergenic | 35.0% | |
| TCGACAAATAGATGTTACAC+AGG | + | chr4_1:3412176-3412195 | None:intergenic | 35.0% | |
| ACATTCAACTCACACTTACA+TGG | - | chr4_1:3412235-3412254 | Msa0529680:intron | 35.0% | |
| ! | AACTCACACTTACATGGTTT+TGG | - | chr4_1:3412241-3412260 | Msa0529680:intron | 35.0% |
| ACTGTGTGAAACTGTGTTTA+AGG | + | chr4_1:3412637-3412656 | None:intergenic | 35.0% | |
| CACTTAGAAGCCAAAAAAAG+AGG | - | chr4_1:3412674-3412693 | Msa0529680:intron | 35.0% | |
| ! | AAGAGGTACACTTGTAAAAG+AGG | - | chr4_1:3412691-3412710 | Msa0529680:intron | 35.0% |
| ! | GTACACTTGTTAAGGATCTA+AGG | - | chr4_1:3412713-3412732 | Msa0529680:CDS | 35.0% |
| GTTAAGGATCTAAGGAGAAA+AGG | - | chr4_1:3412721-3412740 | Msa0529680:CDS | 35.0% | |
| GTAACGAAAACAAGTGTAAG+AGG | - | chr4_1:3410535-3410554 | Msa0529680:CDS | 35.0% | |
| CGTATCAGATAATCGATCAA+TGG | - | chr4_1:3410581-3410600 | Msa0529680:intron | 35.0% | |
| ! | AATAAGATTGGCTGTCAAGT+TGG | + | chr4_1:3410667-3410686 | None:intergenic | 35.0% |
| ACTTGACAGCCAATCTTATT+AGG | - | chr4_1:3410667-3410686 | Msa0529680:intron | 35.0% | |
| !! | GAGAGAATTTGAGTTTTGTG+AGG | + | chr4_1:3410708-3410727 | None:intergenic | 35.0% |
| GCTTAAACAATGTCTCTTGT+TGG | - | chr4_1:3410990-3411009 | Msa0529680:intron | 35.0% | |
| TCTTGTTGGAACTTGAGTTT+GGG | - | chr4_1:3411004-3411023 | Msa0529680:intron | 35.0% | |
| !! | TTTTAGATTGAAGGTGTGAG+TGG | - | chr4_1:3411173-3411192 | Msa0529680:intron | 35.0% |
| !! | AACCACATATTTTGTTGTGC+CGG | + | chr4_1:3411225-3411244 | None:intergenic | 35.0% |
| CATCTCAAAATTTGTCCCAT+AGG | + | chr4_1:3411339-3411358 | None:intergenic | 35.0% | |
| ! | ACTACTTTGGAGAGAAATTG+AGG | - | chr4_1:3411367-3411386 | Msa0529680:intron | 35.0% |
| ! | CTACTTTGGAGAGAAATTGA+GGG | - | chr4_1:3411368-3411387 | Msa0529680:intron | 35.0% |
| AATACTCCACTTCACTTCAT+CGG | + | chr4_1:3411476-3411495 | None:intergenic | 35.0% | |
| ! | TTCTAAAGAAATGGTGAGTG+TGG | - | chr4_1:3411817-3411836 | Msa0529680:intron | 35.0% |
| TCATTGCCACTAAACAGAAA+AGG | + | chr4_1:3411981-3412000 | None:intergenic | 35.0% | |
| AGAAATGAAATGGAAACGCA+GGG | + | chr4_1:3412019-3412038 | None:intergenic | 35.0% | |
| TCGACAAATAGATGTTACAC+AGG | + | chr4_1:3412176-3412195 | None:intergenic | 35.0% | |
| ACATTCAACTCACACTTACA+TGG | - | chr4_1:3412235-3412254 | Msa0529680:intron | 35.0% | |
| ! | AACTCACACTTACATGGTTT+TGG | - | chr4_1:3412241-3412260 | Msa0529680:intron | 35.0% |
| ACTGTGTGAAACTGTGTTTA+AGG | + | chr4_1:3412637-3412656 | None:intergenic | 35.0% | |
| CACTTAGAAGCCAAAAAAAG+AGG | - | chr4_1:3412674-3412693 | Msa0529680:intron | 35.0% | |
| ! | AAGAGGTACACTTGTAAAAG+AGG | - | chr4_1:3412691-3412710 | Msa0529680:intron | 35.0% |
| ! | GTACACTTGTTAAGGATCTA+AGG | - | chr4_1:3412713-3412732 | Msa0529680:CDS | 35.0% |
| GTTAAGGATCTAAGGAGAAA+AGG | - | chr4_1:3412721-3412740 | Msa0529680:CDS | 35.0% | |
| !! | GAGTTTTGTGAGGTTCCTTA+AGG | + | chr4_1:3410698-3410717 | None:intergenic | 40.0% |
| AAGAAGAGAGAGAGAAAGAG+GGG | + | chr4_1:3410802-3410821 | None:intergenic | 40.0% | |
| GAAGAAGAGAGAGAGAAAGA+GGG | + | chr4_1:3410803-3410822 | None:intergenic | 40.0% | |
| AGAAGAAGAGAGAGAGAAAG+AGG | + | chr4_1:3410804-3410823 | None:intergenic | 40.0% | |
| TTTACCCTTCCTTCATCACT+TGG | - | chr4_1:3410840-3410859 | Msa0529680:intron | 40.0% | |
| TTACCCTTCCTTCATCACTT+GGG | - | chr4_1:3410841-3410860 | Msa0529680:intron | 40.0% | |
| ! | TAGTTTGAAACCCAAGACCT+AGG | + | chr4_1:3410871-3410890 | None:intergenic | 40.0% |
| CTCTTGTTGGAACTTGAGTT+TGG | - | chr4_1:3411003-3411022 | Msa0529680:intron | 40.0% | |
| GCTTTGTAGAAACAAATGGG+TGG | + | chr4_1:3411068-3411087 | None:intergenic | 40.0% | |
| ! | TATCGGTGCTTCATAGATAG+AGG | - | chr4_1:3411311-3411330 | Msa0529680:intron | 40.0% |
| ! | ATCGGTGCTTCATAGATAGA+GGG | - | chr4_1:3411312-3411331 | Msa0529680:intron | 40.0% |
| TTCATAGATAGAGGGACCTA+TGG | - | chr4_1:3411320-3411339 | Msa0529680:intron | 40.0% | |
| TCATAGATAGAGGGACCTAT+GGG | - | chr4_1:3411321-3411340 | Msa0529680:intron | 40.0% | |
| AAGAAACCGATGAAGTGAAG+TGG | - | chr4_1:3411467-3411486 | Msa0529680:intron | 40.0% | |
| !! | AATTTCTGGTGCCACAAGTT+AGG | + | chr4_1:3411878-3411897 | None:intergenic | 40.0% |
| !! | GCGATGAGTACTGAAATTTC+TGG | + | chr4_1:3411892-3411911 | None:intergenic | 40.0% |
| TTCAGTACTCATCGCTACAA+TGG | - | chr4_1:3411897-3411916 | Msa0529680:intron | 40.0% | |
| TACTCATCGCTACAATGGTT+AGG | - | chr4_1:3411902-3411921 | Msa0529680:intron | 40.0% | |
| CAGAAATGAAATGGAAACGC+AGG | + | chr4_1:3412020-3412039 | None:intergenic | 40.0% | |
| AGGGTAACTTCACATTACAG+TGG | + | chr4_1:3412370-3412389 | None:intergenic | 40.0% | |
| GGCGTTAAATGCAAATCATC+AGG | + | chr4_1:3412824-3412843 | None:intergenic | 40.0% | |
| !! | GAGTTTTGTGAGGTTCCTTA+AGG | + | chr4_1:3410698-3410717 | None:intergenic | 40.0% |
| AAGAAGAGAGAGAGAAAGAG+GGG | + | chr4_1:3410802-3410821 | None:intergenic | 40.0% | |
| GAAGAAGAGAGAGAGAAAGA+GGG | + | chr4_1:3410803-3410822 | None:intergenic | 40.0% | |
| AGAAGAAGAGAGAGAGAAAG+AGG | + | chr4_1:3410804-3410823 | None:intergenic | 40.0% | |
| TTTACCCTTCCTTCATCACT+TGG | - | chr4_1:3410840-3410859 | Msa0529680:intron | 40.0% | |
| TTACCCTTCCTTCATCACTT+GGG | - | chr4_1:3410841-3410860 | Msa0529680:intron | 40.0% | |
| ! | TAGTTTGAAACCCAAGACCT+AGG | + | chr4_1:3410871-3410890 | None:intergenic | 40.0% |
| CTCTTGTTGGAACTTGAGTT+TGG | - | chr4_1:3411003-3411022 | Msa0529680:intron | 40.0% | |
| GCTTTGTAGAAACAAATGGG+TGG | + | chr4_1:3411068-3411087 | None:intergenic | 40.0% | |
| ! | TATCGGTGCTTCATAGATAG+AGG | - | chr4_1:3411311-3411330 | Msa0529680:intron | 40.0% |
| ! | ATCGGTGCTTCATAGATAGA+GGG | - | chr4_1:3411312-3411331 | Msa0529680:intron | 40.0% |
| TTCATAGATAGAGGGACCTA+TGG | - | chr4_1:3411320-3411339 | Msa0529680:intron | 40.0% | |
| TCATAGATAGAGGGACCTAT+GGG | - | chr4_1:3411321-3411340 | Msa0529680:intron | 40.0% | |
| AAGAAACCGATGAAGTGAAG+TGG | - | chr4_1:3411467-3411486 | Msa0529680:intron | 40.0% | |
| !! | AATTTCTGGTGCCACAAGTT+AGG | + | chr4_1:3411878-3411897 | None:intergenic | 40.0% |
| !! | GCGATGAGTACTGAAATTTC+TGG | + | chr4_1:3411892-3411911 | None:intergenic | 40.0% |
| TTCAGTACTCATCGCTACAA+TGG | - | chr4_1:3411897-3411916 | Msa0529680:intron | 40.0% | |
| TACTCATCGCTACAATGGTT+AGG | - | chr4_1:3411902-3411921 | Msa0529680:intron | 40.0% | |
| CAGAAATGAAATGGAAACGC+AGG | + | chr4_1:3412020-3412039 | None:intergenic | 40.0% | |
| AGGGTAACTTCACATTACAG+TGG | + | chr4_1:3412370-3412389 | None:intergenic | 40.0% | |
| GGCGTTAAATGCAAATCATC+AGG | + | chr4_1:3412824-3412843 | None:intergenic | 40.0% | |
| GATAATCGATCAATGGCGTC+AGG | - | chr4_1:3410588-3410607 | Msa0529680:intron | 45.0% | |
| GCAGAGGAAAAGTAGCGATT+TGG | - | chr4_1:3410610-3410629 | Msa0529680:intron | 45.0% | |
| TTCAGTACTTGCTTCCCACA+TGG | - | chr4_1:3410745-3410764 | Msa0529680:intron | 45.0% | |
| GGAATACTGTCGATCCATGT+GGG | + | chr4_1:3410762-3410781 | None:intergenic | 45.0% | |
| CACATGGATCGACAGTATTC+CGG | - | chr4_1:3410761-3410780 | Msa0529680:intron | 45.0% | |
| AGAAGAGAGAGAGAAAGAGG+GGG | + | chr4_1:3410801-3410820 | None:intergenic | 45.0% | |
| CAACCCAAGTGATGAAGGAA+GGG | + | chr4_1:3410847-3410866 | None:intergenic | 45.0% | |
| TCAACCCAAGTGATGAAGGA+AGG | + | chr4_1:3410848-3410867 | None:intergenic | 45.0% | |
| TAGGTCAACCCAAGTGATGA+AGG | + | chr4_1:3410852-3410871 | None:intergenic | 45.0% | |
| !! | TTCATCACTTGGGTTGACCT+AGG | - | chr4_1:3410851-3410870 | Msa0529680:intron | 45.0% |
| !! | CTATTGAGTATTGGAGCGCT+TGG | - | chr4_1:3410888-3410907 | Msa0529680:intron | 45.0% |
| ! | ATTGGAGCGCTTGGATTAAC+CGG | - | chr4_1:3410897-3410916 | Msa0529680:intron | 45.0% |
| ! | TTTCTAAGAACTCGGCATCC+GGG | + | chr4_1:3410930-3410949 | None:intergenic | 45.0% |
| ! | CTTTCTAAGAACTCGGCATC+CGG | + | chr4_1:3410931-3410950 | None:intergenic | 45.0% |
| GAGTGGTGTCTAACATGTGT+TGG | - | chr4_1:3411190-3411209 | Msa0529680:intron | 45.0% | |
| CACCGGCACAACAAAATATG+TGG | - | chr4_1:3411220-3411239 | Msa0529680:intron | 45.0% | |
| AGAAATGGTGAGTGTGGAGT+AGG | - | chr4_1:3411823-3411842 | Msa0529680:intron | 45.0% | |
| TGTGGAGTAGGAACTAGGAA+TGG | - | chr4_1:3411835-3411854 | Msa0529680:intron | 45.0% | |
| TGAAATGGAAACGCAGGGAA+GGG | + | chr4_1:3412014-3412033 | None:intergenic | 45.0% | |
| ATGAAATGGAAACGCAGGGA+AGG | + | chr4_1:3412015-3412034 | None:intergenic | 45.0% | |
| AGGATCTAAGGAGAAAAGGG+TGG | - | chr4_1:3412725-3412744 | Msa0529680:CDS | 45.0% | |
| !! | CTCTGGGATGTCTGTATGAA+TGG | + | chr4_1:3412914-3412933 | None:intergenic | 45.0% |
| CATTCATACAGACATCCCAG+AGG | - | chr4_1:3412912-3412931 | Msa0529680:five_prime_UTR | 45.0% | |
| GATAATCGATCAATGGCGTC+AGG | - | chr4_1:3410588-3410607 | Msa0529680:intron | 45.0% | |
| GCAGAGGAAAAGTAGCGATT+TGG | - | chr4_1:3410610-3410629 | Msa0529680:intron | 45.0% | |
| TTCAGTACTTGCTTCCCACA+TGG | - | chr4_1:3410745-3410764 | Msa0529680:intron | 45.0% | |
| GGAATACTGTCGATCCATGT+GGG | + | chr4_1:3410762-3410781 | None:intergenic | 45.0% | |
| CACATGGATCGACAGTATTC+CGG | - | chr4_1:3410761-3410780 | Msa0529680:intron | 45.0% | |
| AGAAGAGAGAGAGAAAGAGG+GGG | + | chr4_1:3410801-3410820 | None:intergenic | 45.0% | |
| CAACCCAAGTGATGAAGGAA+GGG | + | chr4_1:3410847-3410866 | None:intergenic | 45.0% | |
| TCAACCCAAGTGATGAAGGA+AGG | + | chr4_1:3410848-3410867 | None:intergenic | 45.0% | |
| TAGGTCAACCCAAGTGATGA+AGG | + | chr4_1:3410852-3410871 | None:intergenic | 45.0% | |
| !! | TTCATCACTTGGGTTGACCT+AGG | - | chr4_1:3410851-3410870 | Msa0529680:intron | 45.0% |
| !! | CTATTGAGTATTGGAGCGCT+TGG | - | chr4_1:3410888-3410907 | Msa0529680:intron | 45.0% |
| ! | ATTGGAGCGCTTGGATTAAC+CGG | - | chr4_1:3410897-3410916 | Msa0529680:intron | 45.0% |
| ! | TTTCTAAGAACTCGGCATCC+GGG | + | chr4_1:3410930-3410949 | None:intergenic | 45.0% |
| ! | CTTTCTAAGAACTCGGCATC+CGG | + | chr4_1:3410931-3410950 | None:intergenic | 45.0% |
| GAGTGGTGTCTAACATGTGT+TGG | - | chr4_1:3411190-3411209 | Msa0529680:intron | 45.0% | |
| CACCGGCACAACAAAATATG+TGG | - | chr4_1:3411220-3411239 | Msa0529680:intron | 45.0% | |
| AGAAATGGTGAGTGTGGAGT+AGG | - | chr4_1:3411823-3411842 | Msa0529680:intron | 45.0% | |
| TGTGGAGTAGGAACTAGGAA+TGG | - | chr4_1:3411835-3411854 | Msa0529680:intron | 45.0% | |
| TGAAATGGAAACGCAGGGAA+GGG | + | chr4_1:3412014-3412033 | None:intergenic | 45.0% | |
| ATGAAATGGAAACGCAGGGA+AGG | + | chr4_1:3412015-3412034 | None:intergenic | 45.0% | |
| AGGATCTAAGGAGAAAAGGG+TGG | - | chr4_1:3412725-3412744 | Msa0529680:CDS | 45.0% | |
| !! | CTCTGGGATGTCTGTATGAA+TGG | + | chr4_1:3412914-3412933 | None:intergenic | 45.0% |
| CATTCATACAGACATCCCAG+AGG | - | chr4_1:3412912-3412931 | Msa0529680:five_prime_UTR | 45.0% | |
| ! | TAGCGATTTGGAGAGCAGCA+GGG | - | chr4_1:3410622-3410641 | Msa0529680:intron | 50.0% |
| CGGAATACTGTCGATCCATG+TGG | + | chr4_1:3410763-3410782 | None:intergenic | 50.0% | |
| ! | GGGGGTCTTACTGAGTTTTC+CGG | + | chr4_1:3410783-3410802 | None:intergenic | 50.0% |
| !! | ACTTGGGTTGACCTAGGTCT+TGG | - | chr4_1:3410857-3410876 | Msa0529680:intron | 50.0% |
| !! | CTTGGGTTGACCTAGGTCTT+GGG | - | chr4_1:3410858-3410877 | Msa0529680:intron | 50.0% |
| ! | TTCTAAGAACTCGGCATCCG+GGG | + | chr4_1:3410929-3410948 | None:intergenic | 50.0% |
| GTGAGTGTGGAGTAGGAACT+AGG | - | chr4_1:3411830-3411849 | Msa0529680:intron | 50.0% | |
| GACGTCGTCTTGATTCCTCT+GGG | + | chr4_1:3412930-3412949 | None:intergenic | 50.0% | |
| ! | TAGCGATTTGGAGAGCAGCA+GGG | - | chr4_1:3410622-3410641 | Msa0529680:intron | 50.0% |
| CGGAATACTGTCGATCCATG+TGG | + | chr4_1:3410763-3410782 | None:intergenic | 50.0% | |
| ! | GGGGGTCTTACTGAGTTTTC+CGG | + | chr4_1:3410783-3410802 | None:intergenic | 50.0% |
| !! | ACTTGGGTTGACCTAGGTCT+TGG | - | chr4_1:3410857-3410876 | Msa0529680:intron | 50.0% |
| !! | CTTGGGTTGACCTAGGTCTT+GGG | - | chr4_1:3410858-3410877 | Msa0529680:intron | 50.0% |
| ! | TTCTAAGAACTCGGCATCCG+GGG | + | chr4_1:3410929-3410948 | None:intergenic | 50.0% |
| GTGAGTGTGGAGTAGGAACT+AGG | - | chr4_1:3411830-3411849 | Msa0529680:intron | 50.0% | |
| GACGTCGTCTTGATTCCTCT+GGG | + | chr4_1:3412930-3412949 | None:intergenic | 50.0% | |
| ! | GTAGCGATTTGGAGAGCAGC+AGG | - | chr4_1:3410621-3410640 | Msa0529680:intron | 55.0% |
| GGATTAACCGGTCCTTTCCC+CGG | - | chr4_1:3410909-3410928 | Msa0529680:intron | 55.0% | |
| ! | CATGTGTTGGTGTGCGACAC+CGG | - | chr4_1:3411203-3411222 | Msa0529680:intron | 55.0% |
| CGACGTCGTCTTGATTCCTC+TGG | + | chr4_1:3412931-3412950 | None:intergenic | 55.0% | |
| ! | GTAGCGATTTGGAGAGCAGC+AGG | - | chr4_1:3410621-3410640 | Msa0529680:intron | 55.0% |
| GGATTAACCGGTCCTTTCCC+CGG | - | chr4_1:3410909-3410928 | Msa0529680:intron | 55.0% | |
| ! | CATGTGTTGGTGTGCGACAC+CGG | - | chr4_1:3411203-3411222 | Msa0529680:intron | 55.0% |
| CGACGTCGTCTTGATTCCTC+TGG | + | chr4_1:3412931-3412950 | None:intergenic | 55.0% | |
| CGATCAATGGCGTCAGGCAG+AGG | - | chr4_1:3410594-3410613 | Msa0529680:intron | 60.0% | |
| AGAACTCGGCATCCGGGGAA+AGG | + | chr4_1:3410924-3410943 | None:intergenic | 60.0% | |
| ! | AACGCAGGGAAGGGTGTGAG+TGG | + | chr4_1:3412005-3412024 | None:intergenic | 60.0% |
| CGATCAATGGCGTCAGGCAG+AGG | - | chr4_1:3410594-3410613 | Msa0529680:intron | 60.0% | |
| AGAACTCGGCATCCGGGGAA+AGG | + | chr4_1:3410924-3410943 | None:intergenic | 60.0% | |
| ! | AACGCAGGGAAGGGTGTGAG+TGG | + | chr4_1:3412005-3412024 | None:intergenic | 60.0% |
| TCGGCATCCGGGGAAAGGAC+CGG | + | chr4_1:3410919-3410938 | None:intergenic | 65.0% | |
| TCGGCATCCGGGGAAAGGAC+CGG | + | chr4_1:3410919-3410938 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 3410524 | 3412967 | 3410524 | ID=Msa0529680;Name=Msa0529680 |
| chr4_1 | mRNA | 3410524 | 3412967 | 3410524 | ID=Msa0529680-mRNA-1;Parent=Msa0529680;Name=Msa0529680-mRNA-1;_AED=0.18;_eAED=0.30;_QI=76|0|0.5|1|0|0.5|2|0|78 |
| chr4_1 | exon | 3410524 | 3410568 | 3410524 | ID=Msa0529680-mRNA-1:exon:1008;Parent=Msa0529680-mRNA-1 |
| chr4_1 | exon | 3412700 | 3412967 | 3412700 | ID=Msa0529680-mRNA-1:exon:1007;Parent=Msa0529680-mRNA-1 |
| chr4_1 | five_prime_UTR | 3412892 | 3412967 | 3412892 | ID=Msa0529680-mRNA-1:five_prime_utr;Parent=Msa0529680-mRNA-1 |
| chr4_1 | CDS | 3412700 | 3412891 | 3412700 | ID=Msa0529680-mRNA-1:cds;Parent=Msa0529680-mRNA-1 |
| chr4_1 | CDS | 3410524 | 3410568 | 3410524 | ID=Msa0529680-mRNA-1:cds;Parent=Msa0529680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
