AlfalfaGEDB | MS.gene003582

M. sativa cultivar XinJiangDaYe / MS.gene003582

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003582.t1	AES89351.1	93.3	89	6	0	1	89	1	89	8.60E-40	172.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003582.t1	P33080	72.8	92	23	1	1	90	1	92	1.0e-33	143.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003582.t1	G7JMA8	93.3	89	6	0	1	89	1	89	6.2e-40	172.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene003582	MS.gene003614	PPI
MS.gene003582	MS.gene23372	PPI
MS.gene003582	MS.gene014668	PPI
MS.gene003582	MS.gene79886	PPI
MS.gene003582	MS.gene50765	PPI
MS.gene003582	MS.gene003596	PPI
MS.gene003582	MS.gene014667	PPI
MS.gene003582	MS.gene062988	PPI
MS.gene003582	MS.gene23371	PPI
MS.gene003582	MS.gene003583	PPI
MS.gene003582	MS.gene062951	PPI
MS.gene003582	MS.gene003608	PPI
MS.gene003582	MS.gene77527	PPI
MS.gene003582	MS.gene003591	PPI
MS.gene003582	MS.gene79891	PPI
MS.gene003582	MS.gene057795	PPI
MS.gene003582	MS.gene045367	PPI
MS.gene003582	MS.gene045364	PPI
MS.gene003602	MS.gene003582	PPI
MS.gene003582	MS.gene045363	PPI
MS.gene003582	MS.gene062973	PPI
MS.gene003582	MS.gene50652	PPI
MS.gene062984	MS.gene003582	PPI
MS.gene003582	MS.gene014669	PPI
MS.gene003582	MS.gene057808	PPI
MS.gene003582	MS.gene002380	PPI
MS.gene003582	MS.gene68165	PPI
MS.gene003582	MS.gene77526	PPI
MS.gene003582	MS.gene77523	PPI
MS.gene003582	MS.gene045366	PPI
MS.gene003582	MS.gene045362	PPI
MS.gene003582	MS.gene057790	PPI
MS.gene003582	MS.gene75315	PPI
MS.gene003587	MS.gene003582	PPI
MS.gene003582	MS.gene057818	PPI
MS.gene003582	MS.gene68164	PPI
MS.gene003582	MS.gene062979	PPI
MS.gene003582	MS.gene003624	PPI
MS.gene003582	MS.gene68759	PPI
MS.gene003582	MS.gene003586	PPI
MS.gene003590	MS.gene003582	PPI
MS.gene003582	MS.gene003627	PPI
MS.gene003582	MS.gene031200	PPI
MS.gene003582	MS.gene79888	PPI
MS.gene003582	MS.gene75676	PPI
MS.gene003582	MS.gene40326	PPI
MS.gene003582	MS.gene031199	PPI
MS.gene003582	MS.gene50687	PPI
MS.gene003582	MS.gene014223	PPI
MS.gene003582	MS.gene79885	PPI
MS.gene50766	MS.gene003582	PPI
MS.gene003582	MS.gene047517	PPI
MS.gene003582	MS.gene01358	PPI
MS.gene003625	MS.gene003582	PPI
MS.gene003582	MS.gene062963	PPI
MS.gene003582	MS.gene063112	PPI
MS.gene003582	MS.gene68163	PPI
MS.gene003582	MS.gene79889	PPI
MS.gene003582	MS.gene045368	PPI
MS.gene003582	MS.gene40327	PPI
MS.gene003582	MS.gene045360	PPI
MS.gene003582	MS.gene014222	PPI
MS.gene003582	MS.gene045361	PPI
MS.gene003582	MS.gene75678	PPI
MS.gene003582	MS.gene75314	PPI
MS.gene003582	MS.gene01764	PPI
MS.gene062952	MS.gene003582	PPI
MS.gene003582	MS.gene75673	PPI
MS.gene003582	MS.gene057778	PPI
MS.gene23370	MS.gene003582	PPI
MS.gene77529	MS.gene003582	PPI
MS.gene003594	MS.gene003582	PPI
MS.gene003582	MS.gene68760	PPI
MS.gene003582	MS.gene031198	PPI
MS.gene50665	MS.gene003582	PPI
MS.gene003582	MS.gene50676	PPI
MS.gene003582	MS.gene50764	PPI
MS.gene003582	MS.gene77528	PPI
MS.gene003582	MS.gene75316	PPI
MS.gene003582	MS.gene014671	PPI
MS.gene003582	MS.gene003615	PPI
MS.gene003582	MS.gene003577	PPI
MS.gene003582	MS.gene75672	PPI
MS.gene003582	MS.gene75674	PPI
MS.gene003582	MS.gene50654	PPI
MS.gene003582	MS.gene50675	PPI
MS.gene003582	MS.gene062974	PPI
MS.gene50763	MS.gene003582	PPI
MS.gene045365	MS.gene003582	PPI
MS.gene003582	MS.gene014670	PPI
MS.gene003582	MS.gene062943	PPI
MS.gene003582	MS.gene057801	PPI
MS.gene003582	MS.gene77524	PPI
MS.gene003582	MS.gene68162	PPI
MS.gene50659	MS.gene003582	PPI
MS.gene003582	MS.gene75675	PPI
MS.gene003582	MS.gene79887	PPI
MS.gene003582	MS.gene75679	PPI
MS.gene003582	MS.gene68761	PPI
MS.gene003582	MS.gene40325	PPI
MS.gene031201	MS.gene003582	PPI
MS.gene003582	MS.gene75677	PPI
MS.gene003582	MS.gene50677	PPI
MS.gene003582	MS.gene79890	PPI
MS.gene003582	MS.gene50684	PPI
MS.gene003582	MS.gene057797	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003582.t1	MTR_4g072830	92.222	90	7	0	1	90	1	90	1.71e-58	174
MS.gene003582.t1	MTR_4g072370	88.636	88	10	0	1	88	1	88	3.24e-54	163
MS.gene003582.t1	MTR_4g072330	84.091	88	14	0	1	88	1	88	9.44e-53	159
MS.gene003582.t1	MTR_4g072580	87.640	89	8	1	1	89	1	86	1.96e-52	159
MS.gene003582.t1	MTR_4g072490	82.955	88	12	1	1	88	1	85	1.20e-50	154
MS.gene003582.t1	MTR_4g072740	84.091	88	11	1	1	88	1	85	3.67e-50	153
MS.gene003582.t1	MTR_4g072630	81.818	88	14	1	1	88	1	86	5.62e-50	152
MS.gene003582.t1	MTR_4g072600	84.270	89	11	1	1	89	1	86	1.26e-49	151
MS.gene003582.t1	MTR_4g072470	82.955	88	12	1	1	88	1	85	8.05e-48	147
MS.gene003582.t1	MTR_4g072465	78.409	88	17	1	1	88	1	86	5.02e-47	145
MS.gene003582.t1	MTR_4g072540	81.818	88	14	1	1	88	1	86	5.08e-47	145
MS.gene003582.t1	MTR_4g072870	73.626	91	21	1	1	88	1	91	7.18e-47	145
MS.gene003582.t1	MTR_3g084150	72.826	92	23	1	1	90	1	92	1.39e-45	141
MS.gene003582.t1	MTR_3g084170	75.000	92	21	1	1	90	1	92	1.45e-45	141
MS.gene003582.t1	MTR_4g072510	79.545	88	16	1	1	88	1	86	1.88e-45	141
MS.gene003582.t1	MTR_3g084180	71.739	92	24	1	1	90	1	92	1.15e-44	139
MS.gene003582.t1	MTR_3g084240	73.913	92	22	1	1	90	1	92	1.45e-44	139
MS.gene003582.t1	MTR_4g072670	80.682	88	15	1	1	88	1	86	1.48e-44	139
MS.gene003582.t1	MTR_8g461410	70.652	92	25	1	1	90	1	92	5.53e-44	137
MS.gene003582.t1	MTR_4g072240	69.231	91	25	1	1	88	1	91	6.40e-44	137
MS.gene003582.t1	MTR_4g072720	77.273	88	18	1	1	88	1	86	1.04e-43	136
MS.gene003582.t1	MTR_3g110038	72.826	92	23	1	1	90	1	92	1.04e-43	137
MS.gene003582.t1	MTR_4g072310	72.043	93	23	1	1	90	1	93	1.11e-43	137
MS.gene003582.t1	MTR_4g072220	69.892	93	25	1	1	90	1	93	1.46e-43	136
MS.gene003582.t1	MTR_3g110032	70.968	93	24	1	1	90	1	93	1.73e-43	136
MS.gene003582.t1	MTR_4g072880	71.429	91	23	1	1	88	1	91	2.42e-43	136
MS.gene003582.t1	MTR_3g084220	71.739	92	24	1	1	90	1	92	3.53e-43	135
MS.gene003582.t1	MTR_4g072610	74.157	89	19	1	1	89	1	85	4.44e-43	135
MS.gene003582.t1	MTR_4g072300	68.132	91	26	1	1	88	1	91	6.48e-43	135
MS.gene003582.t1	MTR_4g050700	70.968	93	24	1	1	90	1	93	6.51e-43	135
MS.gene003582.t1	MTR_2g012410	70.968	93	24	1	1	90	1	93	6.51e-43	135
MS.gene003582.t1	MTR_4g072650	76.404	89	17	2	1	89	1	85	1.32e-42	134
MS.gene003582.t1	MTR_4g072260	67.742	93	27	1	1	90	1	93	1.55e-42	134
MS.gene003582.t1	MTR_4g072860	74.194	93	21	1	1	90	1	93	4.79e-42	132
MS.gene003582.t1	MTR_4g072250	74.725	91	19	2	1	88	1	90	4.97e-42	132
MS.gene003582.t1	MTR_5g008350	81.818	77	11	1	1	77	1	74	5.61e-42	132
MS.gene003582.t1	MTR_4g072270	68.817	93	26	1	1	90	1	93	9.89e-42	132
MS.gene003582.t1	MTR_4g072890	67.033	91	27	1	1	88	1	91	1.65e-41	131
MS.gene003582.t1	MTR_4g072730	68.889	90	26	1	1	88	1	90	1.81e-41	131
MS.gene003582.t1	MTR_4g072500	73.118	93	21	2	1	90	1	92	1.83e-41	131
MS.gene003582.t1	MTR_4g072230	73.118	93	20	2	1	90	1	91	1.96e-41	131
MS.gene003582.t1	MTR_4g072690	78.409	88	16	1	1	88	1	85	5.63e-41	129
MS.gene003582.t1	MTR_4g072480	67.391	92	28	1	1	90	1	92	6.40e-41	130
MS.gene003582.t1	MTR_3g110042	71.910	89	23	1	1	87	1	89	1.43e-40	129
MS.gene003582.t1	MTR_4g072640	71.429	91	24	1	1	89	1	91	1.46e-40	129
MS.gene003582.t1	MTR_4g072620	65.217	92	30	1	1	90	1	92	2.72e-40	128
MS.gene003582.t1	MTR_3g084250	67.391	92	28	1	1	90	1	92	2.75e-40	128
MS.gene003582.t1	MTR_3g117630	68.889	90	25	1	4	90	3	92	5.38e-40	127
MS.gene003582.t1	MTR_4g072530	71.429	91	22	2	1	88	1	90	6.11e-40	127
MS.gene003582.t1	MTR_4g072380	75.581	86	17	2	1	85	1	83	6.89e-40	127
MS.gene003582.t1	MTR_4g072680	66.304	92	29	1	1	90	1	92	9.41e-40	127
MS.gene003582.t1	MTR_4g072570	68.478	92	27	1	1	90	1	92	1.20e-39	126
MS.gene003582.t1	MTR_4g072590	76.136	88	18	1	1	88	1	85	1.86e-39	125
MS.gene003582.t1	MTR_3g084260	68.132	91	26	1	1	88	1	91	1.89e-39	126
MS.gene003582.t1	MTR_4g072450	75.000	88	19	1	1	88	1	85	2.01e-39	125
MS.gene003582.t1	MTR_4g072820	75.000	88	17	3	1	87	1	84	3.62e-39	125
MS.gene003582.t1	MTR_4g072460	64.130	92	31	1	1	90	1	92	2.95e-38	123
MS.gene003582.t1	MTR_4g072660	64.444	90	29	1	1	90	1	87	4.91e-38	122
MS.gene003582.t1	MTR_3g084160	65.217	92	30	1	1	90	1	92	1.90e-37	121
MS.gene003582.t1	MTR_3g084190	65.217	92	30	1	1	90	1	92	2.24e-37	120
MS.gene003582.t1	MTR_8g461420	65.217	92	30	1	1	90	1	92	6.14e-37	119
MS.gene003582.t1	MTR_4g072850	69.149	94	25	1	1	90	1	94	7.27e-37	119
MS.gene003582.t1	MTR_3g110045	67.778	90	27	1	3	90	62	151	8.85e-37	121
MS.gene003582.t1	MTR_3g084210	64.130	92	31	1	1	90	1	92	9.95e-37	119
MS.gene003582.t1	MTR_3g084230	64.130	92	31	1	1	90	1	92	3.83e-36	117
MS.gene003582.t1	MTR_5g008360	67.470	83	27	0	8	90	1	83	4.58e-36	117
MS.gene003582.t1	MTR_5g008370	66.667	90	28	1	1	88	1	90	5.81e-35	116
MS.gene003582.t1	MTR_4g072940	67.391	92	26	1	3	90	33	124	2.07e-33	112
MS.gene003582.t1	MTR_4g072560	55.670	97	33	3	1	87	1	97	1.03e-32	109
MS.gene003582.t1	MTR_3g084200	70.833	72	19	1	1	70	1	72	3.64e-32	108
MS.gene003582.t1	MTR_4g072980	54.348	92	37	2	1	87	1	92	5.54e-32	107
MS.gene003582.t1	MTR_3g117640	52.525	99	35	2	1	87	1	99	7.23e-31	105
MS.gene003582.t1	MTR_4g072910	67.123	73	23	1	16	88	29	100	1.24e-30	104
MS.gene003582.t1	MTR_4g072550	62.195	82	30	1	10	90	22	103	1.60e-30	103
MS.gene003582.t1	MTR_4g072770	72.308	65	18	0	23	87	15	79	3.26e-30	102
MS.gene003582.t1	MTR_4g072750	66.216	74	21	1	1	70	1	74	1.61e-28	98.6
MS.gene003582.t1	MTR_3g110035	57.143	84	31	1	7	90	60	138	4.59e-28	99.0
MS.gene003582.t1	MTR_4g072280	62.667	75	25	1	1	72	1	75	4.64e-28	97.1
MS.gene003582.t1	MTR_4g072290	58.065	93	22	2	1	90	1	79	4.87e-28	97.1
MS.gene003582.t1	MTR_6g077850	51.899	79	38	0	11	89	22	100	9.94e-25	89.4
MS.gene003582.t1	MTR_3g113310	58.209	67	27	1	21	87	40	105	5.84e-24	87.4
MS.gene003582.t1	MTR_3g117610	59.420	69	27	1	21	89	43	110	6.69e-24	87.4
MS.gene003582.t1	MTR_4g072190	52.439	82	37	2	5	85	17	97	1.74e-23	86.3
MS.gene003582.t1	MTR_8g461400	51.087	92	17	2	1	90	1	66	1.09e-21	80.5
MS.gene003582.t1	MTR_4g072930	52.564	78	32	2	13	85	30	107	3.81e-21	80.5
MS.gene003582.t1	MTR_5g021820	54.545	66	29	1	22	87	39	103	7.88e-20	77.0
MS.gene003582.t1	MTR_8g076040	47.059	85	37	2	8	85	19	102	1.09e-19	76.6
MS.gene003582.t1	MTR_2g043960	45.556	90	37	2	2	80	44	132	1.28e-18	75.5
MS.gene003582.t1	MTR_4g072840	50.000	88	14	3	1	87	1	59	1.45e-18	72.4
MS.gene003582.t1	MTR_1g094750	54.839	62	27	1	22	83	49	109	7.08e-18	72.4
MS.gene003582.t1	MTR_4g124750	55.932	59	25	1	22	80	68	125	3.42e-17	71.6
MS.gene003582.t1	MTR_1g009150	46.835	79	41	1	5	83	53	130	1.42e-16	70.5
MS.gene003582.t1	MTR_1g024085	42.857	91	46	2	4	89	13	102	2.88e-16	68.9
MS.gene003582.t1	MTR_4g025830	41.379	87	43	3	5	88	65	146	4.08e-16	68.9
MS.gene003582.t1	MTR_4g005310	51.613	62	29	1	23	83	62	123	6.66e-16	68.2
MS.gene003582.t1	MTR_7g101740	50.746	67	32	1	22	88	39	104	7.96e-16	67.0
MS.gene003582.t1	MTR_7g118010	47.826	69	33	2	23	89	23	90	1.02e-15	66.6
MS.gene003582.t1	MTR_1g063950	44.286	70	38	1	14	83	39	107	1.21e-15	67.0
MS.gene003582.t1	MTR_0388s0020	44.737	76	38	2	16	88	68	142	1.45e-15	67.4
MS.gene003582.t1	MTR_1g061570	51.389	72	32	2	14	83	8	78	1.73e-15	66.6
MS.gene003582.t1	MTR_3g092220	46.377	69	34	2	14	80	24	91	8.01e-15	64.7
MS.gene003582.t1	MTR_4g072160	41.860	86	49	1	4	89	18	102	9.97e-15	65.1
MS.gene003582.t1	MTR_4g005320	50.820	61	29	1	23	83	70	129	1.84e-14	64.7
MS.gene003582.t1	MTR_8g461210	48.529	68	34	1	22	89	34	100	2.54e-14	63.2
MS.gene003582.t1	MTR_3g105900	66.667	42	14	0	22	63	1171	1212	3.24e-14	66.6
MS.gene003582.t1	MTR_8g026730	43.478	69	36	2	23	89	27	94	7.08e-14	62.0
MS.gene003582.t1	MTR_5g008380	87.500	32	4	0	57	88	246	277	7.69e-14	64.7
MS.gene003582.t1	MTR_3g109160	52.459	61	28	1	23	83	69	128	3.99e-13	61.6
MS.gene003582.t1	MTR_2g095430	40.541	74	39	2	7	76	29	101	7.09e-12	57.4
MS.gene003582.t1	MTR_7g101890	38.571	70	40	2	9	76	38	106	1.39e-11	56.2
MS.gene003582.t1	MTR_2g066830	38.272	81	41	3	2	80	41	114	3.68e-11	55.8
MS.gene003582.t1	MTR_7g405740	42.623	61	34	1	23	83	67	126	4.87e-11	55.8
MS.gene003582.t1	MTR_4g021810	44.444	72	38	2	10	80	13	83	7.19e-11	54.3
MS.gene003582.t1	MTR_1g059770	38.095	63	38	1	23	85	49	110	9.74e-11	54.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003582.t1	AT4G38840	69.118	68	20	1	22	88	32	99	2.54e-32	108
MS.gene003582.t1	AT5G18020	59.036	83	29	2	8	89	13	91	6.23e-32	107
MS.gene003582.t1	AT5G18080	56.962	79	33	1	10	87	11	89	2.66e-31	105
MS.gene003582.t1	AT2G21210	60.811	74	27	1	17	88	22	95	1.71e-30	103
MS.gene003582.t1	AT5G18050	56.790	81	30	2	8	87	13	89	2.35e-30	103
MS.gene003582.t1	AT2G21200	62.500	72	26	1	17	87	15	86	2.45e-30	103
MS.gene003582.t1	AT4G38825	59.459	74	29	1	15	87	15	88	2.73e-30	103
MS.gene003582.t1	AT4G34770	65.432	81	26	1	10	88	22	102	4.66e-30	102
MS.gene003582.t1	AT5G18060	58.025	81	29	2	8	87	13	89	4.90e-30	102
MS.gene003582.t1	AT4G34810	66.667	72	18	2	23	90	48	117	6.65e-30	103
MS.gene003582.t1	AT5G18010	57.333	75	31	1	14	87	15	89	9.16e-30	101
MS.gene003582.t1	AT2G21210	60.811	74	27	1	17	88	89	162	9.94e-30	103
MS.gene003582.t1	AT5G18030	61.972	71	26	1	18	87	17	87	1.28e-29	101
MS.gene003582.t1	AT4G34800	56.977	86	32	2	1	83	1	84	1.52e-29	101
MS.gene003582.t1	AT4G38850	55.422	83	27	2	8	87	13	88	1.02e-28	99.0
MS.gene003582.t1	AT3G03820	52.809	89	39	1	2	87	6	94	1.09e-27	96.7
MS.gene003582.t1	AT3G03840	59.155	71	27	1	19	87	23	93	5.60e-27	94.7
MS.gene003582.t1	AT3G03850	65.152	66	21	1	24	87	26	91	1.76e-26	93.6
MS.gene003582.t1	AT4G13790	48.780	82	37	2	8	87	13	91	6.60e-26	92.0
MS.gene003582.t1	AT4G34780	62.500	72	24	1	21	89	26	97	8.44e-26	92.4
MS.gene003582.t1	AT4G34790	67.164	67	19	2	23	86	39	105	9.32e-26	92.0
MS.gene003582.t1	AT3G03830	57.971	69	26	1	22	87	23	91	1.37e-24	88.6
MS.gene003582.t1	AT4G38860	48.864	88	38	1	5	85	15	102	7.41e-24	87.4
MS.gene003582.t1	AT2G21220	48.864	88	37	2	5	85	15	101	7.55e-23	84.7
MS.gene003582.t1	AT4G34760	47.778	90	37	2	5	85	16	104	2.34e-22	83.6
MS.gene003582.t1	AT1G75580	59.701	67	26	1	21	87	42	107	3.26e-22	83.2
MS.gene003582.t1	AT4G36110	47.674	86	39	2	5	85	17	101	8.52e-20	77.0
MS.gene003582.t1	AT2G16580	45.455	88	37	2	8	85	19	105	9.78e-20	77.0
MS.gene003582.t1	AT1G19830	58.824	68	26	2	21	87	46	112	3.36e-19	75.9
MS.gene003582.t1	AT3G43120	55.932	59	25	1	22	80	78	135	9.22e-18	73.2
MS.gene003582.t1	AT2G18010	50.000	72	35	1	14	85	39	109	9.93e-18	72.0
MS.gene003582.t1	AT3G20220	54.839	62	26	2	23	83	47	107	6.14e-17	70.1
MS.gene003582.t1	AT5G20810	57.627	59	24	1	22	80	78	135	6.51e-17	71.2
MS.gene003582.t1	AT5G20810	57.627	59	24	1	22	80	78	135	1.22e-16	70.9
MS.gene003582.t1	AT2G37030	53.968	63	28	1	22	84	48	109	1.67e-16	68.9
MS.gene003582.t1	AT5G66260	42.391	92	47	2	2	88	8	98	3.64e-16	67.4
MS.gene003582.t1	AT1G75590	46.429	84	37	3	4	80	16	98	1.08e-15	67.8
MS.gene003582.t1	AT1G19840	45.783	83	38	2	4	80	16	97	2.91e-15	66.6
MS.gene003582.t1	AT3G51200	44.304	79	41	3	7	83	22	99	3.77e-15	65.1
MS.gene003582.t1	AT3G53250	44.595	74	35	2	11	84	42	109	6.23e-15	65.1
MS.gene003582.t1	AT5G10990	39.130	92	49	2	4	89	16	106	6.69e-15	65.5
MS.gene003582.t1	AT3G53250	44.595	74	35	2	11	84	73	140	1.04e-14	65.1
MS.gene003582.t1	AT3G61900	45.070	71	35	2	22	89	29	98	3.60e-14	63.5
MS.gene003582.t1	AT4G34750	43.478	69	38	1	22	90	36	103	4.57e-14	63.5
MS.gene003582.t1	AT4G34750	43.478	69	38	1	22	90	36	103	4.57e-14	63.5
MS.gene003582.t1	AT2G46690	44.928	69	34	2	15	80	16	83	4.16e-13	60.5
MS.gene003582.t1	AT3G12830	41.250	80	42	2	8	87	39	113	9.83e-13	59.7
MS.gene003582.t1	AT4G31320	50.820	61	29	1	23	83	80	139	1.38e-12	60.5
MS.gene003582.t1	AT2G24400	52.459	61	28	1	23	83	64	123	1.67e-12	60.1
MS.gene003582.t1	AT2G45210	39.189	74	41	2	18	88	74	146	1.86e-12	59.7
MS.gene003582.t1	AT4G12410	49.180	61	27	2	23	80	76	135	1.89e-12	59.3
MS.gene003582.t1	AT4G00880	47.826	69	33	2	23	89	28	95	1.99e-12	58.5
MS.gene003582.t1	AT3G60690	42.647	68	35	2	23	87	88	154	4.97e-12	58.5
MS.gene003582.t1	AT3G09870	49.231	65	30	2	14	76	36	99	1.43e-11	56.2
MS.gene003582.t1	AT4G22620	40.580	69	37	2	23	88	79	146	1.52e-11	57.0
MS.gene003582.t1	AT5G03310	46.269	67	31	2	22	83	38	104	1.68e-11	56.2
MS.gene003582.t1	AT2G36210	34.615	78	51	0	8	85	39	116	2.91e-11	55.8

Find 26 sgRNAs with CRISPR-Local

Find 26 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTTGGTTTAAGTATGATAT+TGG	0.286782	4.1:+30706877	None:intergenic
AATTTCCTCTCCCACATATA+CGG	0.318798	4.1:+30706915	None:intergenic
GATGCCCTTCTGATGATAAC+AGG	0.359570	4.1:+30706985	None:intergenic
GTTGGTTTAAGTATGATATT+GGG	0.370306	4.1:+30706878	None:intergenic
CCACACCCTTTGAAGATGCT+TGG	0.454529	4.1:+30706959	None:intergenic
GGGATATCTTGCCGTATATG+TGG	0.487155	4.1:-30706926	MS.gene003582:CDS
TTCAGCAGTTCTTGAAATGA+TGG	0.497296	4.1:+30706856	None:intergenic
TTCGAATATGATCATCCAAT+GGG	0.511444	4.1:-30706817	MS.gene003582:CDS
CCAAGCATCTTCAAAGGGTG+TGG	0.518182	4.1:-30706959	MS.gene003582:CDS
ATATCACTTCTCACTTGAGT+AGG	0.522252	4.1:-30706756	MS.gene003582:CDS
GCAGTTCTTGAAATGATGGT+TGG	0.526801	4.1:+30706860	None:intergenic
GTTTACCTGTTATCATCAGA+AGG	0.529683	4.1:-30706990	MS.gene003582:CDS
AAAGGGTGTGGATGTGCCAA+AGG	0.536562	4.1:-30706947	MS.gene003582:CDS
ATTCGAATATGATCATCCAA+TGG	0.544520	4.1:-30706818	MS.gene003582:CDS
ATCAAACCAAGCATCTTCAA+AGG	0.547858	4.1:-30706965	MS.gene003582:CDS
TATACGGCAAGATATCCCTT+TGG	0.566418	4.1:+30706931	None:intergenic
TTTACCTGTTATCATCAGAA+GGG	0.569343	4.1:-30706989	MS.gene003582:CDS
TCAAACCAAGCATCTTCAAA+GGG	0.571970	4.1:-30706964	MS.gene003582:CDS
TCTTGCCGTATATGTGGGAG+AGG	0.580806	4.1:-30706920	MS.gene003582:CDS
GGATATCTTGCCGTATATGT+GGG	0.581962	4.1:-30706925	MS.gene003582:CDS
AAGAACACATCTTCTCTGCA+TGG	0.602229	4.1:+30706781	None:intergenic
GGAATAGTGAGACCACCCAT+TGG	0.603922	4.1:+30706802	None:intergenic
AAGGGTGTGGATGTGCCAAA+GGG	0.608749	4.1:-30706946	MS.gene003582:CDS
AGAACTGCTGAATCAAGCTG+AGG	0.650449	4.1:-30706845	MS.gene003582:CDS
GAATATGATCATCCAATGGG+TGG	0.654072	4.1:-30706814	MS.gene003582:CDS
ATGTGGGAGAGGAAATTAAG+CGG	0.692919	4.1:-30706909	MS.gene003582:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GTTGGTTTAAGTATGATATT+GGG	+	chr4.1:30706875-30706894	None:intergenic	25.0%
	ATTCGAATATGATCATCCAA+TGG	-	chr4.1:30706932-30706951	MS.gene003582:CDS	30.0%
	TTCGAATATGATCATCCAAT+GGG	-	chr4.1:30706933-30706952	MS.gene003582:CDS	30.0%
	TTTACCTGTTATCATCAGAA+GGG	-	chr4.1:30706761-30706780	MS.gene003582:CDS	30.0%
!!	GGTTGGTTTAAGTATGATAT+TGG	+	chr4.1:30706876-30706895	None:intergenic	30.0%
	AATTTCCTCTCCCACATATA+CGG	+	chr4.1:30706838-30706857	None:intergenic	35.0%
	ATATCACTTCTCACTTGAGT+AGG	-	chr4.1:30706994-30707013	MS.gene003582:CDS	35.0%
	ATCAAACCAAGCATCTTCAA+AGG	-	chr4.1:30706785-30706804	MS.gene003582:CDS	35.0%
	GTTTACCTGTTATCATCAGA+AGG	-	chr4.1:30706760-30706779	MS.gene003582:CDS	35.0%
	TCAAACCAAGCATCTTCAAA+GGG	-	chr4.1:30706786-30706805	MS.gene003582:CDS	35.0%
	TTCAGCAGTTCTTGAAATGA+TGG	+	chr4.1:30706897-30706916	None:intergenic	35.0%
	AAGAACACATCTTCTCTGCA+TGG	+	chr4.1:30706972-30706991	None:intergenic	40.0%
	ATGTGGGAGAGGAAATTAAG+CGG	-	chr4.1:30706841-30706860	MS.gene003582:CDS	40.0%
	GAATATGATCATCCAATGGG+TGG	-	chr4.1:30706936-30706955	MS.gene003582:CDS	40.0%
	GCAGTTCTTGAAATGATGGT+TGG	+	chr4.1:30706893-30706912	None:intergenic	40.0%
	GGATATCTTGCCGTATATGT+GGG	-	chr4.1:30706825-30706844	MS.gene003582:CDS	40.0%
	TATACGGCAAGATATCCCTT+TGG	+	chr4.1:30706822-30706841	None:intergenic	40.0%
	AGAACTGCTGAATCAAGCTG+AGG	-	chr4.1:30706905-30706924	MS.gene003582:CDS	45.0%
	GATGCCCTTCTGATGATAAC+AGG	+	chr4.1:30706768-30706787	None:intergenic	45.0%
	GGGATATCTTGCCGTATATG+TGG	-	chr4.1:30706824-30706843	MS.gene003582:CDS	45.0%
	CCAAGCATCTTCAAAGGGTG+TGG	-	chr4.1:30706791-30706810	MS.gene003582:CDS	50.0%
	GGAATAGTGAGACCACCCAT+TGG	+	chr4.1:30706951-30706970	None:intergenic	50.0%
	TCTTGCCGTATATGTGGGAG+AGG	-	chr4.1:30706830-30706849	MS.gene003582:CDS	50.0%
!	AAAGGGTGTGGATGTGCCAA+AGG	-	chr4.1:30706803-30706822	MS.gene003582:CDS	50.0%
!	AAGGGTGTGGATGTGCCAAA+GGG	-	chr4.1:30706804-30706823	MS.gene003582:CDS	50.0%
!	CCACACCCTTTGAAGATGCT+TGG	+	chr4.1:30706794-30706813	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	30706750	30707022	30706750	ID=MS.gene003582
chr4.1	mRNA	30706750	30707022	30706750	ID=MS.gene003582.t1;Parent=MS.gene003582
chr4.1	exon	30706750	30707022	30706750	ID=MS.gene003582.t1.exon1;Parent=MS.gene003582.t1
chr4.1	CDS	30706750	30707022	30706750	ID=cds.MS.gene003582.t1;Parent=MS.gene003582.t1

Gene Sequence	>MS.gene003582 ATGGGTTTTCGTTTACCTGTTATCATCAGAAGGGCATCAAACCAAGCATCTTCAAAGGGTGTGGATGTGCCAAAGGGATATCTTGCCGTATATGTGGGAGAGGAAATTAAGCGGTTTGTGATCCCAATATCATACTTAAACCAACCATCATTTCAAGAACTGCTGAATCAAGCTGAGGAACAATTCGAATATGATCATCCAATGGGTGGTCTCACTATTCCATGCAGAGAAGATGTGTTCTTAGATATCACTTCTCACTTGAGTAGGTTATAG
Protein sequence	>MS.gene003582.t1 MGFRLPVIIRRASNQASSKGVDVPKGYLAVYVGEEIKRFVIPISYLNQPSFQELLNQAEEQFEYDHPMGGLTIPCREDVFLDITSHLSRL