AlfalfaGEDB | MS.gene062984

M. sativa cultivar XinJiangDaYe / MS.gene062984

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062984.t1	AES89350.1	90.7	86	8	0	1	86	1	86	1.00E-37	165.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062984.t1	P33080	70.0	90	20	2	1	84	1	89	3.0e-30	132.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062984.t1	G7JMA7	90.7	86	8	0	1	86	1	86	7.2e-38	165.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene062984	MS.gene003606	PPI
MS.gene062984	MS.gene50664	PPI
MS.gene062984	MS.gene057785	PPI
MS.gene062984	MS.gene50670	PPI
MS.gene062984	MS.gene50669	PPI
MS.gene062984	MS.gene70685	PPI
MS.gene062984	MS.gene057807	PPI
MS.gene062984	MS.gene062941	PPI
MS.gene062984	MS.gene50662	PPI
MS.gene062984	MS.gene50660	PPI
MS.gene062946	MS.gene062984	PPI
MS.gene062984	MS.gene003623	PPI
MS.gene062984	MS.gene057799	PPI
MS.gene062984	MS.gene003582	PPI
MS.gene062984	MS.gene057794	PPI
MS.gene062984	MS.gene50688	PPI
MS.gene062984	MS.gene003629	PPI
MS.gene062984	MS.gene003603	PPI
MS.gene062984	MS.gene003630	PPI
MS.gene062984	MS.gene062966	PPI
MS.gene062984	MS.gene062980	PPI
MS.gene062984	MS.gene50689	PPI
MS.gene062984	MS.gene23367	PPI
MS.gene062984	MS.gene50683	PPI
MS.gene062984	MS.gene003610	PPI
MS.gene062984	MS.gene057809	PPI
MS.gene062975	MS.gene062984	PPI
MS.gene062984	MS.gene50772	PPI
MS.gene062984	MS.gene057802	PPI
MS.gene062984	MS.gene50773	PPI
MS.gene062984	MS.gene057796	PPI
MS.gene062984	MS.gene50682	PPI
MS.gene062984	MS.gene057805	PPI
MS.gene062984	MS.gene057800	PPI
MS.gene062984	MS.gene50653	PPI
MS.gene062984	MS.gene003597	PPI
MS.gene062984	MS.gene003598	PPI
MS.gene062984	MS.gene50690	PPI
MS.gene062984	MS.gene057780	PPI
MS.gene062984	MS.gene057788	PPI
MS.gene062970	MS.gene062984	PPI
MS.gene062984	MS.gene50655	PPI
MS.gene062984	MS.gene50685	PPI
MS.gene062984	MS.gene003613	PPI
MS.gene062984	MS.gene003584	PPI
MS.gene062942	MS.gene062984	PPI
MS.gene062984	MS.gene057791	PPI
MS.gene062984	MS.gene50674	PPI
MS.gene003605	MS.gene062984	PPI
MS.gene062984	MS.gene003576	PPI
MS.gene23373	MS.gene062984	PPI
MS.gene062984	MS.gene057782	PPI
MS.gene062984	MS.gene057779	PPI
MS.gene062984	MS.gene50673	PPI
MS.gene062984	MS.gene062965	PPI
MS.gene062984	MS.gene50771	PPI
MS.gene062984	MS.gene022358	PPI
MS.gene062984	MS.gene062954	PPI
MS.gene062984	MS.gene23369	PPI
MS.gene062984	MS.gene062986	PPI
MS.gene062984	MS.gene057783	PPI
MS.gene062984	MS.gene50770	PPI
MS.gene062984	MS.gene062987	PPI
MS.gene062984	MS.gene057811	PPI
MS.gene062984	MS.gene057806	PPI
MS.gene062984	MS.gene062964	PPI
MS.gene062984	MS.gene77525	PPI
MS.gene062984	MS.gene062944	PPI
MS.gene062984	MS.gene50658	PPI
MS.gene062984	MS.gene057777	PPI
MS.gene062984	MS.gene003626	PPI
MS.gene062984	MS.gene28863	PPI
MS.gene062978	MS.gene062984	PPI
MS.gene062984	MS.gene062945	PPI
MS.gene062984	MS.gene057804	PPI
MS.gene062984	MS.gene003580	PPI
MS.gene062984	MS.gene062971	PPI
MS.gene062984	MS.gene50651	PPI
MS.gene062984	MS.gene003607	PPI
MS.gene003593	MS.gene062984	PPI
MS.gene062984	MS.gene50656	PPI
MS.gene062984	MS.gene062969	PPI
MS.gene062972	MS.gene062984	PPI
MS.gene062984	MS.gene50686	PPI
MS.gene062984	MS.gene70683	PPI
MS.gene062984	MS.gene062962	PPI
MS.gene062984	MS.gene50666	PPI
MS.gene062984	MS.gene062985	PPI
MS.gene062984	MS.gene057784	PPI
MS.gene062984	MS.gene062953	PPI
MS.gene062984	MS.gene003622	PPI
MS.gene062984	MS.gene003599	PPI
MS.gene062984	MS.gene23368	PPI
MS.gene057816	MS.gene062984	PPI
MS.gene062984	MS.gene003585	PPI
MS.gene062984	MS.gene057817	PPI
MS.gene062984	MS.gene50668	PPI
MS.gene062984	MS.gene003581	PPI
MS.gene062984	MS.gene70684	PPI
MS.gene062984	MS.gene062958	PPI
MS.gene062984	MS.gene003628	PPI
MS.gene062984	MS.gene057798	PPI
MS.gene062984	MS.gene003612	PPI
MS.gene062984	MS.gene062983	PPI
MS.gene062984	MS.gene062967	PPI
MS.gene062984	MS.gene003579	PPI
MS.gene062984	MS.gene062940	PPI
MS.gene062984	MS.gene062989	PPI
MS.gene062984	MS.gene003595	PPI
MS.gene062984	MS.gene50657	PPI
MS.gene062984	MS.gene062959	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062984.t1	MTR_4g072820	90.698	86	8	0	1	86	1	86	3.37e-55	165
MS.gene062984.t1	MTR_4g072580	77.647	85	17	2	1	84	1	84	7.17e-43	134
MS.gene062984.t1	MTR_4g072610	75.000	84	20	1	1	84	1	83	4.86e-42	132
MS.gene062984.t1	MTR_3g084150	69.231	91	21	2	1	85	1	90	9.00e-42	132
MS.gene062984.t1	MTR_4g072870	69.231	91	22	2	1	85	1	91	1.05e-41	131
MS.gene062984.t1	MTR_4g072380	77.108	83	18	1	1	82	1	83	1.09e-41	131
MS.gene062984.t1	MTR_4g072650	76.190	84	19	1	1	84	1	83	1.56e-41	131
MS.gene062984.t1	MTR_4g072740	74.419	86	20	2	1	85	1	85	2.15e-41	130
MS.gene062984.t1	MTR_4g072370	71.910	89	20	2	1	85	1	88	2.65e-41	130
MS.gene062984.t1	MTR_3g084180	68.132	91	22	2	1	85	1	90	7.99e-41	129
MS.gene062984.t1	MTR_4g072260	70.000	90	21	2	1	84	1	90	8.98e-41	129
MS.gene062984.t1	MTR_4g072220	70.000	90	21	2	1	84	1	90	1.26e-40	129
MS.gene062984.t1	MTR_4g072490	73.256	86	21	2	1	85	1	85	1.28e-40	129
MS.gene062984.t1	MTR_4g072240	65.934	91	25	1	1	85	1	91	1.28e-40	129
MS.gene062984.t1	MTR_4g072330	67.045	88	26	1	1	85	1	88	1.59e-40	128
MS.gene062984.t1	MTR_4g072310	68.478	92	21	2	1	85	1	91	2.31e-40	128
MS.gene062984.t1	MTR_4g072500	67.778	90	24	1	1	85	1	90	3.36e-40	127
MS.gene062984.t1	MTR_8g461410	65.934	91	24	2	1	85	1	90	3.75e-40	127
MS.gene062984.t1	MTR_4g072890	67.033	91	24	2	1	85	1	91	2.04e-39	125
MS.gene062984.t1	MTR_4g072300	63.736	91	27	1	1	85	1	91	2.86e-39	125
MS.gene062984.t1	MTR_3g110042	71.591	88	18	2	1	82	1	87	3.29e-39	125
MS.gene062984.t1	MTR_4g072470	72.093	86	22	2	1	85	1	85	4.74e-39	124
MS.gene062984.t1	MTR_3g084240	67.778	90	24	2	1	85	1	90	6.50e-39	124
MS.gene062984.t1	MTR_4g072530	65.556	90	26	1	1	85	1	90	7.14e-39	124
MS.gene062984.t1	MTR_3g110038	66.667	90	25	2	1	85	1	90	7.41e-39	124
MS.gene062984.t1	MTR_4g072640	66.667	90	25	2	1	85	1	90	1.34e-38	124
MS.gene062984.t1	MTR_3g084250	67.033	91	23	2	1	85	1	90	1.51e-38	124
MS.gene062984.t1	MTR_3g084170	66.667	90	25	2	1	85	1	90	2.86e-38	123
MS.gene062984.t1	MTR_4g072830	71.591	88	20	3	1	84	1	87	2.97e-38	122
MS.gene062984.t1	MTR_4g072600	71.765	85	22	2	1	84	1	84	5.81e-38	122
MS.gene062984.t1	MTR_4g072570	65.934	91	24	2	1	85	1	90	8.37e-38	122
MS.gene062984.t1	MTR_4g072630	70.115	87	23	2	1	85	1	86	9.45e-38	121
MS.gene062984.t1	MTR_4g072880	65.217	92	24	2	1	85	1	91	1.17e-37	121
MS.gene062984.t1	MTR_4g072540	73.563	87	20	2	1	85	1	86	1.40e-37	121
MS.gene062984.t1	MTR_4g072480	63.736	91	26	2	1	85	1	90	3.76e-37	120
MS.gene062984.t1	MTR_4g072230	68.889	90	18	3	1	83	1	87	4.86e-37	120
MS.gene062984.t1	MTR_4g050700	64.835	91	26	2	1	85	1	91	5.09e-37	120
MS.gene062984.t1	MTR_2g012410	64.835	91	26	2	1	85	1	91	5.09e-37	120
MS.gene062984.t1	MTR_4g072850	65.591	93	23	2	1	85	1	92	5.42e-37	120
MS.gene062984.t1	MTR_4g072250	68.478	92	20	3	1	85	1	90	5.70e-37	119
MS.gene062984.t1	MTR_4g072670	72.414	87	21	2	1	85	1	86	9.35e-37	119
MS.gene062984.t1	MTR_4g072465	68.966	87	24	2	1	85	1	86	1.04e-36	119
MS.gene062984.t1	MTR_8g461420	68.889	90	23	1	1	85	1	90	1.05e-36	119
MS.gene062984.t1	MTR_3g117630	66.279	86	22	2	6	85	6	90	1.07e-36	119
MS.gene062984.t1	MTR_4g072590	71.765	85	24	0	1	85	1	85	2.05e-36	118
MS.gene062984.t1	MTR_3g084190	66.667	90	25	1	1	85	1	90	3.64e-36	117
MS.gene062984.t1	MTR_3g084220	63.333	90	28	2	1	85	1	90	3.89e-36	117
MS.gene062984.t1	MTR_4g072720	71.264	87	22	2	1	85	1	86	5.47e-36	117
MS.gene062984.t1	MTR_3g084230	68.132	91	22	2	1	85	1	90	7.51e-36	117
MS.gene062984.t1	MTR_4g072620	60.440	91	29	2	1	85	1	90	8.19e-36	117
MS.gene062984.t1	MTR_4g072660	63.415	82	30	0	1	82	1	82	1.20e-35	116
MS.gene062984.t1	MTR_4g072680	61.538	91	28	2	1	85	1	90	1.20e-35	116
MS.gene062984.t1	MTR_3g084260	60.440	91	30	1	1	85	1	91	1.34e-35	116
MS.gene062984.t1	MTR_3g084210	65.934	91	24	2	1	85	1	90	1.37e-35	116
MS.gene062984.t1	MTR_4g072730	60.440	91	29	2	1	85	1	90	1.73e-35	115
MS.gene062984.t1	MTR_4g072770	63.529	85	26	1	1	85	1	80	4.74e-35	114
MS.gene062984.t1	MTR_4g072270	62.921	89	25	2	1	82	1	88	5.50e-35	114
MS.gene062984.t1	MTR_3g110045	68.539	89	21	2	3	85	62	149	1.68e-34	115
MS.gene062984.t1	MTR_3g110032	61.957	92	27	3	1	85	1	91	1.78e-34	113
MS.gene062984.t1	MTR_4g072510	68.966	87	24	2	1	85	1	86	1.93e-34	113
MS.gene062984.t1	MTR_4g072460	59.341	91	30	2	1	85	1	90	3.30e-34	112
MS.gene062984.t1	MTR_4g072690	67.059	85	28	0	1	85	1	85	3.96e-34	112
MS.gene062984.t1	MTR_4g072940	64.835	91	23	2	3	85	33	122	4.06e-34	113
MS.gene062984.t1	MTR_4g072860	63.043	92	26	2	1	85	1	91	4.42e-34	112
MS.gene062984.t1	MTR_3g084160	64.835	91	25	2	1	85	1	90	8.75e-34	111
MS.gene062984.t1	MTR_5g008350	72.000	75	19	2	1	74	1	74	2.56e-33	110
MS.gene062984.t1	MTR_5g008370	77.273	66	15	0	20	85	25	90	4.97e-33	111
MS.gene062984.t1	MTR_5g008360	65.789	76	25	1	10	85	7	81	1.66e-32	108
MS.gene062984.t1	MTR_4g072450	64.706	85	30	0	1	85	1	85	3.11e-32	107
MS.gene062984.t1	MTR_4g072980	54.023	87	39	1	1	86	8	94	2.55e-31	105
MS.gene062984.t1	MTR_4g072550	60.241	83	29	1	7	85	19	101	6.84e-31	104
MS.gene062984.t1	MTR_4g072560	58.333	84	32	2	4	86	18	99	1.28e-30	103
MS.gene062984.t1	MTR_4g072910	61.538	78	27	1	8	85	26	100	9.98e-30	101
MS.gene062984.t1	MTR_3g117640	64.179	67	23	1	20	85	34	100	9.19e-29	99.4
MS.gene062984.t1	MTR_4g072750	68.493	73	16	1	1	66	1	73	2.58e-28	97.8
MS.gene062984.t1	MTR_4g072840	61.628	86	8	2	1	86	1	61	3.99e-28	96.7
MS.gene062984.t1	MTR_3g084200	67.123	73	17	3	1	67	1	72	6.24e-28	97.4
MS.gene062984.t1	MTR_4g072290	57.647	85	28	1	1	85	1	77	1.53e-27	95.5
MS.gene062984.t1	MTR_4g072930	56.250	80	31	1	10	85	31	110	2.13e-25	91.3
MS.gene062984.t1	MTR_3g110035	62.500	64	24	0	22	85	73	136	5.17e-25	90.9
MS.gene062984.t1	MTR_3g113310	56.061	66	28	1	20	85	42	106	3.49e-24	87.8
MS.gene062984.t1	MTR_4g072280	57.333	75	26	1	1	69	1	75	3.57e-24	87.0
MS.gene062984.t1	MTR_3g117610	58.730	63	25	1	20	82	45	106	2.18e-22	83.6
MS.gene062984.t1	MTR_6g077850	55.385	65	29	0	20	84	34	98	7.64e-22	81.6
MS.gene062984.t1	MTR_4g072190	54.545	66	29	1	20	85	36	100	1.83e-21	80.9
MS.gene062984.t1	MTR_8g076040	51.471	68	32	1	18	85	39	105	7.83e-20	77.0
MS.gene062984.t1	MTR_5g021820	46.250	80	41	2	7	85	26	104	8.15e-20	76.6
MS.gene062984.t1	MTR_4g124750	47.297	74	38	1	12	85	61	133	8.19e-17	70.5
MS.gene062984.t1	MTR_2g043960	50.746	67	29	2	20	86	76	138	3.29e-16	68.9
MS.gene062984.t1	MTR_8g461400	43.333	90	20	3	1	85	1	64	6.86e-16	65.9
MS.gene062984.t1	MTR_4g025830	47.059	68	32	2	20	84	79	145	7.46e-16	68.2
MS.gene062984.t1	MTR_1g009150	47.761	67	34	1	11	77	62	127	1.35e-15	67.8
MS.gene062984.t1	MTR_4g005310	45.588	68	36	1	14	80	56	123	1.50e-15	67.0
MS.gene062984.t1	MTR_1g024085	47.826	69	35	1	9	77	26	93	1.65e-15	67.0
MS.gene062984.t1	MTR_1g094750	47.541	61	31	1	20	80	50	109	2.08e-15	65.9
MS.gene062984.t1	MTR_4g005320	49.180	61	30	1	17	77	67	126	1.34e-14	65.1
MS.gene062984.t1	MTR_7g118010	41.975	81	39	3	2	80	10	84	1.60e-14	63.2
MS.gene062984.t1	MTR_7g104950	35.065	77	49	1	10	86	40	115	4.16e-14	62.8
MS.gene062984.t1	MTR_0388s0020	41.667	84	43	3	4	84	61	141	4.77e-14	63.2
MS.gene062984.t1	MTR_7g101740	46.154	65	34	1	18	82	38	101	8.03e-14	62.0
MS.gene062984.t1	MTR_2g066830	41.176	68	35	2	5	72	47	109	1.18e-13	62.0
MS.gene062984.t1	MTR_3g092220	51.667	60	26	2	20	77	33	91	1.69e-13	60.8
MS.gene062984.t1	MTR_8g026730	45.902	61	30	2	19	77	26	85	1.98e-13	60.5
MS.gene062984.t1	MTR_3g109160	50.000	60	29	1	18	77	67	125	2.71e-13	61.6
MS.gene062984.t1	MTR_8g461210	45.000	60	32	1	18	77	33	91	2.95e-13	60.5
MS.gene062984.t1	MTR_4g072160	48.387	62	29	2	20	80	37	96	3.10e-13	60.8
MS.gene062984.t1	MTR_1g063950	44.262	61	33	1	20	80	48	107	3.79e-13	60.5
MS.gene062984.t1	MTR_1g059770	33.803	71	46	1	16	86	45	114	1.44e-12	58.9
MS.gene062984.t1	MTR_7g405740	37.838	74	45	1	7	80	54	126	1.61e-12	59.7
MS.gene062984.t1	MTR_1g061570	45.455	66	35	1	12	77	11	75	2.45e-12	58.2
MS.gene062984.t1	MTR_2g095430	39.437	71	38	2	7	73	32	101	2.49e-12	58.5
MS.gene062984.t1	MTR_8g096470	43.333	60	33	1	21	80	47	105	5.81e-12	57.0
MS.gene062984.t1	MTR_3g097120	43.243	74	33	2	20	85	9	81	9.74e-12	56.2
MS.gene062984.t1	MTR_3g105900	68.571	35	11	0	20	54	1172	1206	2.28e-11	58.2
MS.gene062984.t1	MTR_8g096440	41.096	73	39	2	10	79	32	103	4.35e-11	55.5
MS.gene062984.t1	MTR_7g104940	35.938	64	40	1	23	86	53	115	4.35e-11	55.1
MS.gene062984.t1	MTR_8g096500	45.763	59	31	1	21	79	50	107	4.55e-11	55.8
MS.gene062984.t1	MTR_8g101520	43.077	65	36	1	21	85	51	114	6.16e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062984.t1	AT5G18050	63.158	76	27	1	11	85	15	90	9.14e-33	109
MS.gene062984.t1	AT5G18020	63.158	76	27	1	11	85	15	90	1.49e-32	108
MS.gene062984.t1	AT5G18080	63.158	76	27	1	11	85	15	90	4.43e-32	107
MS.gene062984.t1	AT5G18060	63.158	76	27	1	11	85	15	90	4.53e-32	107
MS.gene062984.t1	AT4G38840	70.149	67	19	1	20	85	33	99	4.87e-32	107
MS.gene062984.t1	AT5G18030	57.317	82	34	1	5	85	7	88	3.92e-31	105
MS.gene062984.t1	AT5G18010	60.526	76	29	1	11	85	15	90	3.96e-30	102
MS.gene062984.t1	AT2G21210	54.737	95	31	3	1	84	1	94	5.25e-30	102
MS.gene062984.t1	AT2G21200	61.039	77	28	2	9	84	11	86	6.91e-30	101
MS.gene062984.t1	AT3G03840	54.023	87	32	2	1	85	14	94	1.35e-29	101
MS.gene062984.t1	AT4G34810	59.756	82	28	2	9	85	37	118	1.44e-29	102
MS.gene062984.t1	AT2G21210	54.737	95	31	3	1	84	68	161	2.16e-29	102
MS.gene062984.t1	AT4G38850	58.025	81	26	2	8	85	14	89	3.23e-29	100
MS.gene062984.t1	AT4G34800	54.444	90	37	2	1	86	1	90	1.06e-28	99.0
MS.gene062984.t1	AT4G38825	53.012	83	37	2	5	85	7	89	1.58e-28	98.6
MS.gene062984.t1	AT3G03820	52.273	88	33	2	1	85	14	95	1.78e-28	98.6
MS.gene062984.t1	AT4G34770	60.811	74	27	1	13	84	28	101	4.17e-28	97.8
MS.gene062984.t1	AT3G03850	54.118	85	37	1	3	85	8	92	3.88e-27	95.1
MS.gene062984.t1	AT4G13790	48.750	80	38	2	8	85	14	92	1.24e-25	91.3
MS.gene062984.t1	AT3G03830	58.824	68	25	1	21	85	25	92	2.82e-25	90.5
MS.gene062984.t1	AT4G34790	58.824	68	26	1	20	85	39	106	5.07e-24	87.8
MS.gene062984.t1	AT4G38860	56.061	66	29	0	20	85	40	105	2.54e-23	85.9
MS.gene062984.t1	AT4G34780	51.250	80	36	2	9	85	17	96	8.69e-23	84.3
MS.gene062984.t1	AT1G75580	57.576	66	27	1	20	85	44	108	3.88e-22	82.8
MS.gene062984.t1	AT2G21220	53.846	65	29	1	20	84	40	103	4.48e-21	80.1
MS.gene062984.t1	AT4G34760	53.030	66	30	1	20	85	43	107	8.28e-21	79.3
MS.gene062984.t1	AT1G19830	59.701	67	25	2	20	85	48	113	1.70e-20	79.0
MS.gene062984.t1	AT2G16580	51.515	66	31	1	20	85	44	108	4.59e-18	72.4
MS.gene062984.t1	AT4G36110	52.308	65	30	1	18	82	38	101	9.18e-18	71.6
MS.gene062984.t1	AT2G18010	53.968	63	28	1	20	82	48	109	1.77e-17	71.2
MS.gene062984.t1	AT3G43120	50.746	67	29	2	20	86	79	141	2.30e-17	72.0
MS.gene062984.t1	AT5G66260	46.753	77	40	1	9	85	23	98	2.68e-17	70.5
MS.gene062984.t1	AT3G51200	49.254	67	33	1	14	80	34	99	5.76e-17	69.7
MS.gene062984.t1	AT3G20220	45.070	71	37	2	11	80	38	107	1.24e-16	69.3
MS.gene062984.t1	AT3G60690	46.479	71	34	2	18	85	86	155	7.87e-16	68.2
MS.gene062984.t1	AT2G45210	45.205	73	36	2	15	84	74	145	8.15e-16	68.2
MS.gene062984.t1	AT5G20810	50.746	67	29	2	20	86	79	141	1.17e-15	67.8
MS.gene062984.t1	AT5G20810	50.746	67	29	2	20	86	79	141	2.50e-15	67.4
MS.gene062984.t1	AT5G10990	41.573	89	41	3	4	86	29	112	6.17e-15	65.5
MS.gene062984.t1	AT2G37030	47.541	61	31	1	20	80	49	108	2.22e-14	63.5
MS.gene062984.t1	AT3G61900	43.662	71	36	2	10	77	20	89	4.75e-14	63.2
MS.gene062984.t1	AT1G75590	47.059	68	34	2	11	77	32	98	8.30e-14	62.8
MS.gene062984.t1	AT3G12830	42.857	70	37	2	3	72	35	101	1.66e-13	61.6
MS.gene062984.t1	AT2G24400	45.714	70	37	1	8	77	52	120	2.32e-13	62.0
MS.gene062984.t1	AT4G09530	43.836	73	38	2	11	80	19	91	2.84e-13	60.1
MS.gene062984.t1	AT2G46690	42.466	73	37	3	8	77	13	83	3.17e-13	60.5
MS.gene062984.t1	AT4G12410	41.892	74	39	2	14	84	70	142	3.49e-13	61.2
MS.gene062984.t1	AT4G31320	45.714	70	37	1	8	77	68	136	3.64e-13	61.6
MS.gene062984.t1	AT1G19840	47.143	70	35	2	9	77	29	97	4.76e-13	60.8
MS.gene062984.t1	AT4G34750	41.791	67	38	1	11	77	28	93	5.88e-13	60.5
MS.gene062984.t1	AT4G34750	41.791	67	38	1	11	77	28	93	5.88e-13	60.5
MS.gene062984.t1	AT1G56150	39.706	68	40	1	10	77	28	94	6.14e-13	59.3
MS.gene062984.t1	AT3G53250	44.262	61	30	1	20	80	52	108	6.89e-13	59.7
MS.gene062984.t1	AT4G00880	50.000	62	28	2	18	77	26	86	1.07e-12	59.3
MS.gene062984.t1	AT3G53250	44.262	61	30	1	20	80	83	139	1.29e-12	59.7
MS.gene062984.t1	AT4G22620	35.802	81	48	2	7	84	66	145	1.21e-11	57.4
MS.gene062984.t1	AT1G16510	34.722	72	46	1	14	85	48	118	1.89e-11	56.6
MS.gene062984.t1	AT5G53590	41.176	68	34	2	20	82	46	112	5.47e-11	55.1
MS.gene062984.t1	AT3G09870	41.538	65	35	2	11	73	36	99	7.14e-11	54.3

Find 19 sgRNAs with CRISPR-Local

Find 20 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATCAAGCAGAAGAAGAATT+TGG	0.279041	4.2:+35392107	MS.gene062984:CDS
CTTTCTTACAACTCTCTTCT+CGG	0.306926	4.2:+35392177	MS.gene062984:CDS
TTCGCTTATCTGGTATTAGA+AGG	0.346910	4.2:+35391958	MS.gene062984:CDS
GGTTGGTTCAATATTGAAAT+GGG	0.381006	4.2:-35392065	None:intergenic
AGGTTGGTTCAATATTGAAA+TGG	0.383914	4.2:-35392066	None:intergenic
TAAACTGCGAGATAGCCTTT+TGG	0.417547	4.2:-35392011	None:intergenic
TAAGAAAGCATCTTCACTAC+AGG	0.449138	4.2:-35392162	None:intergenic
ATTTGGATATGATCATCCTA+TGG	0.456415	4.2:+35392124	MS.gene062984:CDS
TGTAGTAATTCTTGAAATGA+AGG	0.484527	4.2:-35392086	None:intergenic
GGCTATCTCGCAGTTTATGT+TGG	0.487319	4.2:+35392017	MS.gene062984:CDS
GTAATTCTTGAAATGAAGGT+TGG	0.498263	4.2:-35392082	None:intergenic
TGGGATTGCATCCACAGCCT+TGG	0.507805	4.2:-35391991	None:intergenic
GTCATCATCTTCCAAGGCTG+TGG	0.512173	4.2:+35391980	MS.gene062984:CDS
GCTGTGGATGCAATCCCAAA+AGG	0.559098	4.2:+35391996	MS.gene062984:CDS
TTTGGATATGATCATCCTAT+GGG	0.586077	4.2:+35392125	MS.gene062984:CDS
TAGAAGGTCATCATCTTCCA+AGG	0.592917	4.2:+35391974	MS.gene062984:CDS
AAGAAAGCATCTTCACTACA+GGG	0.650473	4.2:-35392161	None:intergenic
GGATATGATCATCCTATGGG+TGG	0.655640	4.2:+35392128	MS.gene062984:CDS
GGAATTGTGATACCACCCAT+AGG	0.670635	4.2:-35392140	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TGTAGTAATTCTTGAAATGA+AGG	-	chr4.2:35392089-35392108	None:intergenic	25.0%
	ATTTGGATATGATCATCCTA+TGG	+	chr4.2:35392124-35392143	MS.gene062984:CDS	30.0%
	GTAATTCTTGAAATGAAGGT+TGG	-	chr4.2:35392085-35392104	None:intergenic	30.0%
	TTTGGATATGATCATCCTAT+GGG	+	chr4.2:35392125-35392144	MS.gene062984:CDS	30.0%
!	AGGTTGGTTCAATATTGAAA+TGG	-	chr4.2:35392069-35392088	None:intergenic	30.0%
!	GGTTGGTTCAATATTGAAAT+GGG	-	chr4.2:35392068-35392087	None:intergenic	30.0%
	CATCAAGCAGAAGAAGAATT+TGG	+	chr4.2:35392107-35392126	MS.gene062984:CDS	35.0%
	CTTTCTTACAACTCTCTTCT+CGG	+	chr4.2:35392177-35392196	MS.gene062984:CDS	35.0%
	TTCGCTTATCTGGTATTAGA+AGG	+	chr4.2:35391958-35391977	MS.gene062984:CDS	35.0%
!!	AAGAAAGCATCTTCACTACA+GGG	-	chr4.2:35392164-35392183	None:intergenic	35.0%
!!	TAAGAAAGCATCTTCACTAC+AGG	-	chr4.2:35392165-35392184	None:intergenic	35.0%
	TAGAAGGTCATCATCTTCCA+AGG	+	chr4.2:35391974-35391993	MS.gene062984:CDS	40.0%
!	AAACTGCGAGATAGCCTTTT+GGG	-	chr4.2:35392013-35392032	None:intergenic	40.0%
!	TAAACTGCGAGATAGCCTTT+TGG	-	chr4.2:35392014-35392033	None:intergenic	40.0%
	GGAATTGTGATACCACCCAT+AGG	-	chr4.2:35392143-35392162	None:intergenic	45.0%
	GGATATGATCATCCTATGGG+TGG	+	chr4.2:35392128-35392147	MS.gene062984:CDS	45.0%
	GGCTATCTCGCAGTTTATGT+TGG	+	chr4.2:35392017-35392036	MS.gene062984:CDS	45.0%
	GCTGTGGATGCAATCCCAAA+AGG	+	chr4.2:35391996-35392015	MS.gene062984:CDS	50.0%
	GTCATCATCTTCCAAGGCTG+TGG	+	chr4.2:35391980-35391999	MS.gene062984:CDS	50.0%
	TGGGATTGCATCCACAGCCT+TGG	-	chr4.2:35391994-35392013	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35391951	35392211	35391951	ID=MS.gene062984
chr4.2	mRNA	35391951	35392211	35391951	ID=MS.gene062984.t1;Parent=MS.gene062984
chr4.2	exon	35391951	35392211	35391951	ID=MS.gene062984.t1.exon1;Parent=MS.gene062984.t1
chr4.2	CDS	35391951	35392211	35391951	ID=cds.MS.gene062984.t1;Parent=MS.gene062984.t1

Gene Sequence	>MS.gene062984 ATGGGTTTTCGCTTATCTGGTATTAGAAGGTCATCATCTTCCAAGGCTGTGGATGCAATCCCAAAAGGCTATCTCGCAGTTTATGTTGGAGACAAAATGAAGCGATTTGTGATTCCCATTTCAATATTGAACCAACCTTCATTTCAAGAATTACTACATCAAGCAGAAGAAGAATTTGGATATGATCATCCTATGGGTGGTATCACAATTCCCTGTAGTGAAGATGCTTTCTTACAACTCTCTTCTCGGCTTCAATGTTAA
Protein sequence	>MS.gene062984.t1 MGFRLSGIRRSSSSKAVDAIPKGYLAVYVGDKMKRFVIPISILNQPSFQELLHQAEEEFGYDHPMGGITIPCSEDAFLQLSSRLQC