AlfalfaGEDB | MS.gene003608

M. sativa cultivar XinJiangDaYe / MS.gene003608

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003608.t1	AES89319.1	90.6	85	8	0	1	85	1	85	3.50E-35	157.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003608.t1	P33079	69.2	91	22	1	1	85	1	91	1.6e-28	126.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003608.t1	G7JL44	90.6	85	8	0	1	85	1	85	2.5e-35	157.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene003608	MS.gene23369	PPI
MS.gene003608	MS.gene062986	PPI
MS.gene003608	MS.gene057783	PPI
MS.gene003608	MS.gene50770	PPI
MS.gene003608	MS.gene062987	PPI
MS.gene003608	MS.gene057811	PPI
MS.gene062972	MS.gene003608	PPI
MS.gene003608	MS.gene057817	PPI
MS.gene003608	MS.gene70684	PPI
MS.gene003608	MS.gene062964	PPI
MS.gene003608	MS.gene003612	PPI
MS.gene003608	MS.gene77525	PPI
MS.gene003608	MS.gene057777	PPI
MS.gene003582	MS.gene003608	PPI
MS.gene003608	MS.gene062945	PPI
MS.gene003608	MS.gene062967	PPI
MS.gene003608	MS.gene057804	PPI
MS.gene003608	MS.gene003579	PPI
MS.gene003608	MS.gene062989	PPI
MS.gene003608	MS.gene003607	PPI
MS.gene003608	MS.gene50656	PPI
MS.gene003608	MS.gene003606	PPI
MS.gene50772	MS.gene003608	PPI
MS.gene003608	MS.gene50686	PPI
MS.gene057809	MS.gene003608	PPI
MS.gene003608	MS.gene70683	PPI
MS.gene003608	MS.gene062962	PPI
MS.gene003608	MS.gene062985	PPI
MS.gene062978	MS.gene003608	PPI
MS.gene003608	MS.gene50669	PPI
MS.gene003608	MS.gene70685	PPI
MS.gene003608	MS.gene003622	PPI
MS.gene003608	MS.gene003599	PPI
MS.gene003608	MS.gene23368	PPI
MS.gene003608	MS.gene50662	PPI
MS.gene003593	MS.gene003608	PPI
MS.gene003608	MS.gene003585	PPI
MS.gene003608	MS.gene50660	PPI
MS.gene003608	MS.gene003623	PPI
MS.gene003608	MS.gene50668	PPI
MS.gene003608	MS.gene003581	PPI
MS.gene003608	MS.gene062958	PPI
MS.gene003608	MS.gene003628	PPI
MS.gene003608	MS.gene057798	PPI
MS.gene003580	MS.gene003608	PPI
MS.gene003608	MS.gene057794	PPI
MS.gene003608	MS.gene003629	PPI
MS.gene003608	MS.gene062983	PPI
MS.gene003608	MS.gene062966	PPI
MS.gene003608	MS.gene062980	PPI
MS.gene003608	MS.gene23367	PPI
MS.gene003608	MS.gene062940	PPI
MS.gene003608	MS.gene003595	PPI
MS.gene003608	MS.gene062959	PPI
MS.gene057816	MS.gene003608	PPI
MS.gene003608	MS.gene50664	PPI
MS.gene003608	MS.gene057785	PPI
MS.gene003608	MS.gene50773	PPI
MS.gene003608	MS.gene50670	PPI
MS.gene003608	MS.gene057800	PPI
MS.gene003608	MS.gene50653	PPI
MS.gene003608	MS.gene003598	PPI
MS.gene003608	MS.gene50690	PPI
MS.gene50657	MS.gene003608	PPI
MS.gene003608	MS.gene062941	PPI
MS.gene50683	MS.gene003608	PPI
MS.gene003608	MS.gene003613	PPI
MS.gene057807	MS.gene003608	PPI
MS.gene003608	MS.gene057799	PPI
MS.gene003608	MS.gene50688	PPI
MS.gene003608	MS.gene003603	PPI
MS.gene003608	MS.gene003630	PPI
MS.gene003608	MS.gene057779	PPI
MS.gene003608	MS.gene50673	PPI
MS.gene003626	MS.gene003608	PPI
MS.gene003608	MS.gene003610	PPI
MS.gene003608	MS.gene50771	PPI
MS.gene062946	MS.gene003608	PPI
MS.gene003608	MS.gene022358	PPI
MS.gene057805	MS.gene003608	PPI
MS.gene003608	MS.gene057802	PPI
MS.gene003605	MS.gene003608	PPI
MS.gene003608	MS.gene057796	PPI
MS.gene003608	MS.gene062954	PPI
MS.gene003608	MS.gene50682	PPI
MS.gene003608	MS.gene003597	PPI
MS.gene062971	MS.gene003608	PPI
MS.gene23373	MS.gene003608	PPI
MS.gene003608	MS.gene057806	PPI
MS.gene003608	MS.gene057780	PPI
MS.gene003608	MS.gene057788	PPI
MS.gene062975	MS.gene003608	PPI
MS.gene003608	MS.gene062944	PPI
MS.gene003608	MS.gene50655	PPI
MS.gene003608	MS.gene28863	PPI
MS.gene003608	MS.gene50685	PPI
MS.gene50689	MS.gene003608	PPI
MS.gene003608	MS.gene003584	PPI
MS.gene003608	MS.gene057791	PPI
MS.gene003608	MS.gene50674	PPI
MS.gene003576	MS.gene003608	PPI
MS.gene003608	MS.gene50651	PPI
MS.gene003608	MS.gene057782	PPI
MS.gene003608	MS.gene062969	PPI
MS.gene003608	MS.gene062965	PPI
MS.gene003608	MS.gene50666	PPI
MS.gene003608	MS.gene057784	PPI
MS.gene062970	MS.gene003608	PPI
MS.gene003608	MS.gene50658	PPI
MS.gene062942	MS.gene003608	PPI
MS.gene003608	MS.gene062953	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003608.t1	MTR_4g072490	90.588	85	8	0	1	85	1	85	1.95e-53	160
MS.gene003608.t1	MTR_4g072740	88.235	85	10	0	1	85	1	85	1.35e-51	156
MS.gene003608.t1	MTR_4g072630	86.047	86	11	1	1	85	1	86	6.30e-49	149
MS.gene003608.t1	MTR_4g072465	84.884	86	12	1	1	85	1	86	1.34e-48	149
MS.gene003608.t1	MTR_4g072580	83.529	85	14	0	1	85	1	85	1.82e-48	148
MS.gene003608.t1	MTR_4g072470	82.353	85	15	0	1	85	1	85	4.51e-48	147
MS.gene003608.t1	MTR_4g072830	81.609	87	13	1	1	84	1	87	2.07e-46	143
MS.gene003608.t1	MTR_4g072370	79.545	88	15	1	1	85	1	88	2.29e-46	143
MS.gene003608.t1	MTR_4g072670	86.047	86	11	1	1	85	1	86	8.74e-46	141
MS.gene003608.t1	MTR_4g072600	78.824	85	18	0	1	85	1	85	1.88e-44	138
MS.gene003608.t1	MTR_4g072720	84.884	86	12	1	1	85	1	86	4.54e-44	137
MS.gene003608.t1	MTR_4g072330	72.727	88	21	1	1	85	1	88	5.46e-44	137
MS.gene003608.t1	MTR_4g072540	83.721	86	13	1	1	85	1	86	1.15e-43	136
MS.gene003608.t1	MTR_4g072510	83.721	86	13	1	1	85	1	86	1.87e-43	135
MS.gene003608.t1	MTR_3g084170	72.222	90	20	1	1	85	1	90	1.88e-43	136
MS.gene003608.t1	MTR_4g072610	77.647	85	18	1	1	85	1	84	2.69e-43	135
MS.gene003608.t1	MTR_3g084150	74.725	91	16	2	1	85	1	90	2.75e-43	135
MS.gene003608.t1	MTR_8g461410	73.626	91	17	2	1	85	1	90	8.43e-43	134
MS.gene003608.t1	MTR_3g084180	73.626	91	17	2	1	85	1	90	1.03e-42	134
MS.gene003608.t1	MTR_3g084240	71.111	90	21	1	1	85	1	90	1.84e-42	133
MS.gene003608.t1	MTR_4g072650	77.647	85	18	1	1	85	1	84	1.88e-42	133
MS.gene003608.t1	MTR_3g110032	70.330	91	21	1	1	85	1	91	4.76e-42	132
MS.gene003608.t1	MTR_3g084220	70.000	90	22	1	1	85	1	90	1.19e-41	131
MS.gene003608.t1	MTR_4g072590	81.176	85	16	0	1	85	1	85	1.50e-41	131
MS.gene003608.t1	MTR_3g110038	70.000	90	22	1	1	85	1	90	1.90e-41	130
MS.gene003608.t1	MTR_4g072690	81.176	85	16	0	1	85	1	85	2.04e-41	130
MS.gene003608.t1	MTR_4g050700	69.231	91	22	1	1	85	1	91	6.70e-41	129
MS.gene003608.t1	MTR_2g012410	69.231	91	22	1	1	85	1	91	6.70e-41	129
MS.gene003608.t1	MTR_5g008350	82.432	74	13	0	1	74	1	74	7.94e-41	129
MS.gene003608.t1	MTR_4g072880	71.429	91	20	1	1	85	1	91	8.53e-41	129
MS.gene003608.t1	MTR_4g072450	81.176	85	16	0	1	85	1	85	9.36e-41	129
MS.gene003608.t1	MTR_4g072380	74.419	86	21	1	1	85	1	86	4.93e-40	127
MS.gene003608.t1	MTR_4g072310	68.132	91	23	1	1	85	1	91	5.88e-40	127
MS.gene003608.t1	MTR_3g110042	73.333	90	17	2	1	84	1	89	6.81e-40	127
MS.gene003608.t1	MTR_4g072250	71.429	91	19	2	1	85	1	90	2.13e-39	125
MS.gene003608.t1	MTR_4g072870	67.033	91	24	1	1	85	1	91	2.55e-39	125
MS.gene003608.t1	MTR_4g072820	74.419	86	20	2	1	85	1	85	3.06e-39	125
MS.gene003608.t1	MTR_3g084260	68.132	91	23	1	1	85	1	91	4.67e-39	125
MS.gene003608.t1	MTR_4g072850	73.913	92	17	1	1	85	1	92	6.26e-39	124
MS.gene003608.t1	MTR_4g072240	65.934	91	25	1	1	85	1	91	3.74e-38	122
MS.gene003608.t1	MTR_4g072480	66.667	90	25	1	1	85	1	90	6.74e-38	122
MS.gene003608.t1	MTR_4g072860	68.132	91	23	1	1	85	1	91	9.13e-38	121
MS.gene003608.t1	MTR_3g117630	69.318	88	21	1	4	85	3	90	1.77e-37	120
MS.gene003608.t1	MTR_4g072620	64.444	90	27	1	1	85	1	90	2.74e-37	120
MS.gene003608.t1	MTR_4g072270	65.934	91	25	1	1	85	1	91	4.29e-37	120
MS.gene003608.t1	MTR_4g072570	66.667	90	25	1	1	85	1	90	4.96e-37	119
MS.gene003608.t1	MTR_4g072890	64.835	91	26	1	1	85	1	91	7.72e-37	119
MS.gene003608.t1	MTR_4g072220	64.835	91	26	1	1	85	1	91	9.65e-37	119
MS.gene003608.t1	MTR_3g084250	66.667	90	25	1	1	85	1	90	1.15e-36	119
MS.gene003608.t1	MTR_4g072300	63.736	91	27	1	1	85	1	91	2.10e-36	118
MS.gene003608.t1	MTR_4g072230	67.033	91	22	2	1	85	1	89	3.14e-36	117
MS.gene003608.t1	MTR_4g072660	63.529	85	31	0	1	85	1	85	4.02e-36	117
MS.gene003608.t1	MTR_4g072680	64.444	90	27	1	1	85	1	90	4.55e-36	117
MS.gene003608.t1	MTR_4g072260	63.736	91	27	1	1	85	1	91	5.34e-36	117
MS.gene003608.t1	MTR_4g072500	63.333	90	28	1	1	85	1	90	7.53e-36	117
MS.gene003608.t1	MTR_4g072730	62.222	90	29	1	1	85	1	90	1.30e-35	116
MS.gene003608.t1	MTR_4g072640	63.333	90	28	1	1	85	1	90	3.78e-35	115
MS.gene003608.t1	MTR_4g072530	62.222	90	29	1	1	85	1	90	3.93e-35	115
MS.gene003608.t1	MTR_4g072460	62.222	90	29	1	1	85	1	90	7.87e-35	114
MS.gene003608.t1	MTR_3g084210	63.333	90	28	1	1	85	1	90	1.32e-34	114
MS.gene003608.t1	MTR_3g084190	65.556	90	26	1	1	85	1	90	2.63e-34	113
MS.gene003608.t1	MTR_3g084160	64.444	90	27	1	1	85	1	90	4.08e-34	112
MS.gene003608.t1	MTR_8g461420	64.444	90	27	1	1	85	1	90	4.91e-34	112
MS.gene003608.t1	MTR_5g008360	65.385	78	27	0	8	85	4	81	9.02e-34	111
MS.gene003608.t1	MTR_3g084230	63.333	90	28	1	1	85	1	90	1.44e-33	111
MS.gene003608.t1	MTR_4g072940	70.000	90	20	1	3	85	33	122	1.57e-33	112
MS.gene003608.t1	MTR_3g110045	63.636	88	27	1	3	85	62	149	3.07e-32	109
MS.gene003608.t1	MTR_5g008370	76.471	68	16	0	18	85	23	90	1.90e-31	107
MS.gene003608.t1	MTR_3g084200	68.056	72	18	1	1	67	1	72	2.09e-30	103
MS.gene003608.t1	MTR_4g072560	50.515	97	35	2	1	84	1	97	2.06e-29	100
MS.gene003608.t1	MTR_4g072980	52.174	92	36	2	1	84	1	92	2.19e-29	100
MS.gene003608.t1	MTR_4g072550	64.789	71	25	0	15	85	31	101	9.96e-28	96.7
MS.gene003608.t1	MTR_4g072770	66.667	66	22	0	20	85	15	80	1.28e-27	95.9
MS.gene003608.t1	MTR_4g072910	59.722	72	29	0	14	85	29	100	1.76e-27	96.3
MS.gene003608.t1	MTR_3g117640	46.000	100	39	2	1	85	1	100	2.71e-27	95.9
MS.gene003608.t1	MTR_4g072290	55.294	85	30	1	1	85	1	77	2.16e-25	90.1
MS.gene003608.t1	MTR_3g110035	62.500	64	24	0	22	85	73	136	1.27e-23	87.4
MS.gene003608.t1	MTR_4g072750	60.274	73	22	1	1	66	1	73	1.26e-22	83.2
MS.gene003608.t1	MTR_4g072280	62.687	67	19	1	1	61	1	67	3.98e-22	82.0
MS.gene003608.t1	MTR_4g072930	47.500	80	37	2	11	85	31	110	2.42e-20	78.2
MS.gene003608.t1	MTR_3g117610	53.846	65	29	1	18	82	43	106	2.93e-20	78.2
MS.gene003608.t1	MTR_4g072190	48.101	79	36	2	8	82	20	97	8.05e-20	76.6
MS.gene003608.t1	MTR_6g077850	49.254	67	34	0	19	85	33	99	1.01e-19	76.3
MS.gene003608.t1	MTR_3g113310	49.254	67	33	1	18	84	40	105	1.07e-19	76.6
MS.gene003608.t1	MTR_8g461400	46.667	90	17	2	1	85	1	64	3.22e-19	74.3
MS.gene003608.t1	MTR_4g072840	49.412	85	18	2	1	85	1	60	2.04e-18	72.0
MS.gene003608.t1	MTR_2g043960	55.932	59	25	1	19	77	75	132	1.01e-16	70.5
MS.gene003608.t1	MTR_5g021820	48.485	66	33	1	19	84	39	103	1.19e-16	68.6
MS.gene003608.t1	MTR_4g124750	54.237	59	26	1	19	77	68	125	1.40e-16	69.7
MS.gene003608.t1	MTR_8g076040	50.000	64	31	1	19	82	40	102	6.89e-16	66.6
MS.gene003608.t1	MTR_1g009150	50.725	69	33	1	12	80	63	130	4.16e-15	66.6
MS.gene003608.t1	MTR_1g094750	51.613	62	29	1	19	80	49	109	7.07e-15	64.3
MS.gene003608.t1	MTR_7g101740	46.875	64	33	1	19	82	39	101	3.36e-14	62.8
MS.gene003608.t1	MTR_1g063950	43.548	62	34	1	19	80	47	107	6.36e-14	62.4
MS.gene003608.t1	MTR_3g105900	63.636	44	16	0	17	60	1169	1212	7.86e-14	65.1
MS.gene003608.t1	MTR_1g061570	51.613	62	29	1	19	80	18	78	8.16e-14	62.0
MS.gene003608.t1	MTR_1g024085	50.847	59	28	1	19	77	36	93	3.00e-13	61.2
MS.gene003608.t1	MTR_4g005320	47.541	61	31	1	20	80	70	129	6.09e-13	60.5
MS.gene003608.t1	MTR_5g008380	84.375	32	5	0	54	85	246	277	7.63e-13	62.0
MS.gene003608.t1	MTR_7g118010	45.588	68	34	2	20	85	23	89	9.35e-13	58.9
MS.gene003608.t1	MTR_4g005310	42.424	66	37	1	16	80	58	123	1.67e-12	59.3
MS.gene003608.t1	MTR_3g092220	36.905	84	50	2	4	85	17	99	3.00e-12	57.8
MS.gene003608.t1	MTR_4g072160	43.662	71	39	1	10	80	27	96	5.43e-12	57.8
MS.gene003608.t1	MTR_3g109160	49.180	61	30	1	20	80	69	128	1.04e-11	57.4
MS.gene003608.t1	MTR_8g026730	41.176	68	37	2	20	85	27	93	1.19e-11	56.2
MS.gene003608.t1	MTR_0388s0020	43.939	66	33	2	11	73	66	130	4.45e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003608.t1	AT4G38840	73.529	68	17	1	19	85	32	99	4.62e-32	107
MS.gene003608.t1	AT2G21210	59.211	76	29	1	12	85	20	95	1.31e-28	99.0
MS.gene003608.t1	AT5G18050	58.108	74	30	1	13	85	17	90	3.26e-28	97.8
MS.gene003608.t1	AT4G38850	59.259	81	26	2	8	85	13	89	4.65e-28	97.1
MS.gene003608.t1	AT4G34810	63.291	79	24	2	11	84	39	117	7.98e-28	97.4
MS.gene003608.t1	AT5G18080	57.500	80	31	2	7	85	13	90	8.63e-28	96.7
MS.gene003608.t1	AT2G21210	59.211	76	29	1	12	85	87	162	8.65e-28	99.0
MS.gene003608.t1	AT5G18060	59.459	74	29	1	13	85	17	90	8.82e-28	96.7
MS.gene003608.t1	AT5G18020	55.000	80	33	2	7	85	13	90	3.23e-27	95.1
MS.gene003608.t1	AT2G21200	55.696	79	34	1	7	84	8	86	4.60e-27	94.7
MS.gene003608.t1	AT5G18030	56.250	80	30	2	7	85	13	88	7.97e-27	94.0
MS.gene003608.t1	AT4G38825	58.333	72	29	1	15	85	18	89	1.16e-26	93.6
MS.gene003608.t1	AT4G34800	55.952	84	33	2	1	80	1	84	1.54e-26	93.6
MS.gene003608.t1	AT5G18010	53.750	80	34	2	7	85	13	90	1.44e-25	90.9
MS.gene003608.t1	AT4G13790	49.367	79	38	1	8	84	13	91	1.69e-24	88.2
MS.gene003608.t1	AT3G03840	56.944	72	29	1	16	85	23	94	4.21e-24	87.4
MS.gene003608.t1	AT4G34770	56.000	75	31	1	13	85	28	102	8.07e-24	87.0
MS.gene003608.t1	AT3G03820	53.247	77	33	1	12	85	19	95	1.08e-23	86.3
MS.gene003608.t1	AT3G03850	61.194	67	24	1	21	85	26	92	1.90e-23	85.5
MS.gene003608.t1	AT3G03830	55.263	76	31	1	13	85	17	92	2.41e-23	85.5
MS.gene003608.t1	AT4G34790	62.295	61	21	1	20	78	39	99	1.65e-21	81.3
MS.gene003608.t1	AT4G34780	53.521	71	30	1	17	84	25	95	7.04e-21	79.7
MS.gene003608.t1	AT4G38860	53.846	65	30	0	18	82	38	102	1.47e-20	78.6
MS.gene003608.t1	AT2G21220	50.000	68	33	1	18	85	38	104	4.92e-19	74.7
MS.gene003608.t1	AT1G75580	52.239	67	31	1	18	84	42	107	2.27e-18	73.2
MS.gene003608.t1	AT4G34760	50.769	65	31	1	18	82	41	104	4.60e-18	72.4
MS.gene003608.t1	AT2G16580	50.769	65	31	1	18	82	42	105	8.49e-18	71.6
MS.gene003608.t1	AT4G36110	48.438	64	32	1	19	82	39	101	1.69e-16	68.6
MS.gene003608.t1	AT5G20810	55.932	59	25	1	19	77	78	135	4.02e-16	68.9
MS.gene003608.t1	AT5G20810	55.932	59	25	1	19	77	78	135	6.72e-16	68.9
MS.gene003608.t1	AT2G18010	48.438	64	32	1	19	82	47	109	7.12e-16	67.0
MS.gene003608.t1	AT3G43120	52.542	59	27	1	19	77	78	135	8.49e-16	68.2
MS.gene003608.t1	AT1G19830	52.941	68	30	2	18	84	46	112	1.14e-15	66.6
MS.gene003608.t1	AT5G66260	46.970	66	34	1	20	85	34	98	4.94e-14	62.0
MS.gene003608.t1	AT2G46690	44.444	72	36	2	9	77	13	83	1.33e-13	61.2
MS.gene003608.t1	AT2G37030	47.619	63	32	1	19	81	48	109	1.58e-13	61.2
MS.gene003608.t1	AT3G61900	38.554	83	47	2	6	85	16	97	2.48e-13	61.2
MS.gene003608.t1	AT3G20220	46.154	65	33	2	20	83	47	110	3.70e-13	60.1
MS.gene003608.t1	AT4G34750	39.189	74	44	1	9	82	26	98	4.34e-13	60.8
MS.gene003608.t1	AT4G34750	39.189	74	44	1	9	82	26	98	4.34e-13	60.8
MS.gene003608.t1	AT1G75590	47.458	59	30	1	19	77	41	98	1.19e-12	59.7
MS.gene003608.t1	AT3G51200	41.772	79	40	3	7	80	22	99	1.40e-12	58.5
MS.gene003608.t1	AT1G19840	45.714	70	35	2	10	77	29	97	2.89e-12	58.5
MS.gene003608.t1	AT5G10990	43.478	69	35	2	9	77	33	97	4.21e-12	58.2
MS.gene003608.t1	AT3G53250	44.444	63	31	1	19	81	51	109	9.84e-12	56.6
MS.gene003608.t1	AT3G53250	45.161	62	30	1	19	80	82	139	1.79e-11	56.6
MS.gene003608.t1	AT2G24400	45.205	73	38	2	9	80	52	123	1.94e-11	57.0
MS.gene003608.t1	AT4G31320	42.466	73	40	2	9	80	68	139	2.14e-11	57.0
MS.gene003608.t1	AT4G00880	42.857	77	39	3	3	77	13	86	5.70e-11	54.7
MS.gene003608.t1	AT4G12410	44.118	68	34	2	20	84	76	142	6.70e-11	55.1

Find 21 sgRNAs with CRISPR-Local

Find 21 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAGCTTGGCTCAACAATTCT+TGG	0.248657	4.1:+30965155	None:intergenic
ACAATTCTTGGAATGAGGTT+TGG	0.392315	4.1:+30965167	None:intergenic
GATGTCCTTCTGATGATAAT+AGG	0.401454	4.1:+30965283	None:intergenic
TTCTGATGATAATAGGTAAA+CGG	0.431960	4.1:+30965290	None:intergenic
GTTTGGTTCAAATATGATAC+AGG	0.443189	4.1:+30965184	None:intergenic
GCTCAACAATTCTTGGAATG+AGG	0.458184	4.1:+30965162	None:intergenic
ATTCAAATTGTTCCTCAGCT+TGG	0.481982	4.1:+30965140	None:intergenic
TACACTGCTAGATATCCCTT+TGG	0.484780	4.1:+30965238	None:intergenic
GACATCATCTTCAAAAGTTG+TGG	0.499899	4.1:-30965266	MS.gene003608:CDS
TTTGAATACGACCCTCCAAT+GGG	0.519750	4.1:-30965124	MS.gene003608:CDS
AAGAAAATTTCTTCTCTGCA+AGG	0.519764	4.1:+30965088	None:intergenic
AAAAGTTGTGGATGTTCCAA+AGG	0.527225	4.1:-30965254	MS.gene003608:CDS
AAAGTTGTGGATGTTCCAAA+GGG	0.543795	4.1:-30965253	MS.gene003608:CDS
ATTTGAATACGACCCTCCAA+TGG	0.545953	4.1:-30965125	MS.gene003608:CDS
GTTTACCTATTATCATCAGA+AGG	0.577855	4.1:-30965288	MS.gene003608:CDS
GGAATAGTGAGACCACCCAT+TGG	0.603922	4.1:+30965109	None:intergenic
ATAGTGAGACCACCCATTGG+AGG	0.607611	4.1:+30965112	None:intergenic
TAGTGAGACCACCCATTGGA+GGG	0.635609	4.1:+30965113	None:intergenic
AGAATTGTTGAGCCAAGCTG+AGG	0.641874	4.1:-30965152	MS.gene003608:CDS
GAATACGACCCTCCAATGGG+TGG	0.665793	4.1:-30965121	MS.gene003608:CDS
ATGTAAGTGAGAAAATGAAG+CGG	0.680120	4.1:-30965216	MS.gene003608:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TTCTGATGATAATAGGTAAA+CGG	+	chr4.1:30965074-30965093	None:intergenic	25.0%
	AAGAAAATTTCTTCTCTGCA+AGG	+	chr4.1:30965276-30965295	None:intergenic	30.0%
	ATGTAAGTGAGAAAATGAAG+CGG	-	chr4.1:30965145-30965164	MS.gene003608:CDS	30.0%
	GTTTACCTATTATCATCAGA+AGG	-	chr4.1:30965073-30965092	MS.gene003608:CDS	30.0%
!	GTTTGGTTCAAATATGATAC+AGG	+	chr4.1:30965180-30965199	None:intergenic	30.0%
	AAAAGTTGTGGATGTTCCAA+AGG	-	chr4.1:30965107-30965126	MS.gene003608:CDS	35.0%
	AAAGTTGTGGATGTTCCAAA+GGG	-	chr4.1:30965108-30965127	MS.gene003608:CDS	35.0%
	ACAATTCTTGGAATGAGGTT+TGG	+	chr4.1:30965197-30965216	None:intergenic	35.0%
	ATTCAAATTGTTCCTCAGCT+TGG	+	chr4.1:30965224-30965243	None:intergenic	35.0%
	GACATCATCTTCAAAAGTTG+TGG	-	chr4.1:30965095-30965114	MS.gene003608:CDS	35.0%
	GATGTCCTTCTGATGATAAT+AGG	+	chr4.1:30965081-30965100	None:intergenic	35.0%
	ATTTGAATACGACCCTCCAA+TGG	-	chr4.1:30965236-30965255	MS.gene003608:CDS	40.0%
	GCTCAACAATTCTTGGAATG+AGG	+	chr4.1:30965202-30965221	None:intergenic	40.0%
	TACACTGCTAGATATCCCTT+TGG	+	chr4.1:30965126-30965145	None:intergenic	40.0%
	TTTGAATACGACCCTCCAAT+GGG	-	chr4.1:30965237-30965256	MS.gene003608:CDS	40.0%
	AGAATTGTTGAGCCAAGCTG+AGG	-	chr4.1:30965209-30965228	MS.gene003608:CDS	45.0%
	CAGCTTGGCTCAACAATTCT+TGG	+	chr4.1:30965209-30965228	None:intergenic	45.0%
	ATAGTGAGACCACCCATTGG+AGG	+	chr4.1:30965252-30965271	None:intergenic	50.0%
	GGAATAGTGAGACCACCCAT+TGG	+	chr4.1:30965255-30965274	None:intergenic	50.0%
	TAGTGAGACCACCCATTGGA+GGG	+	chr4.1:30965251-30965270	None:intergenic	50.0%
	GAATACGACCCTCCAATGGG+TGG	-	chr4.1:30965240-30965259	MS.gene003608:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	30965063	30965320	30965063	ID=MS.gene003608
chr4.1	mRNA	30965063	30965320	30965063	ID=MS.gene003608.t1;Parent=MS.gene003608
chr4.1	exon	30965063	30965320	30965063	ID=MS.gene003608.t1.exon1;Parent=MS.gene003608.t1
chr4.1	CDS	30965063	30965320	30965063	ID=cds.MS.gene003608.t1;Parent=MS.gene003608.t1

Gene Sequence	>MS.gene003608 ATGGGATTCCGTTTACCTATTATCATCAGAAGGACATCATCTTCAAAAGTTGTGGATGTTCCAAAGGGATATCTAGCAGTGTATGTAAGTGAGAAAATGAAGCGGTTTGTGATTCCTGTATCATATTTGAACCAAACCTCATTCCAAGAATTGTTGAGCCAAGCTGAGGAACAATTTGAATACGACCCTCCAATGGGTGGTCTCACTATTCCTTGCAGAGAAGAAATTTTCTTAGATATCACTTCTCGCTTGAATTGA
Protein sequence	>MS.gene003608.t1 MGFRLPIIIRRTSSSKVVDVPKGYLAVYVSEKMKRFVIPVSYLNQTSFQELLSQAEEQFEYDPPMGGLTIPCREEIFLDITSRLN