AlfalfaGEDB | MS.gene057795

M. sativa cultivar XinJiangDaYe / MS.gene057795

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057795.t1	XP_003607146.1	90.6	85	8	0	1	85	1	85	1.10E-36	162.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057795.t1	P33079	65.9	91	25	1	1	85	1	91	2.5e-29	129.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057795.t1	G7JMA0	90.6	85	8	0	1	85	1	85	7.9e-37	162.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene057795	MS.gene062974	0.952008	6.10E-110	-1.69E-46
MS.gene057795	MS.gene31206	0.805828	1.11E-49	-1.69E-46
MS.gene057795	MS.gene50651	0.833424	5.38E-56	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene50669	MS.gene057795	PPI
MS.gene003629	MS.gene057795	PPI
MS.gene057795	MS.gene057804	PPI
MS.gene003597	MS.gene057795	PPI
MS.gene003593	MS.gene057795	PPI
MS.gene003579	MS.gene057795	PPI
MS.gene057795	MS.gene50656	PPI
MS.gene062972	MS.gene057795	PPI
MS.gene057795	MS.gene50686	PPI
MS.gene003610	MS.gene057795	PPI
MS.gene057795	MS.gene70683	PPI
MS.gene057795	MS.gene50666	PPI
MS.gene003580	MS.gene057795	PPI
MS.gene057795	MS.gene062985	PPI
MS.gene003582	MS.gene057795	PPI
MS.gene057795	MS.gene062953	PPI
MS.gene057795	MS.gene003622	PPI
MS.gene057800	MS.gene057795	PPI
MS.gene057795	MS.gene003599	PPI
MS.gene057795	MS.gene23368	PPI
MS.gene50772	MS.gene057795	PPI
MS.gene057795	MS.gene057817	PPI
MS.gene057795	MS.gene50668	PPI
MS.gene057795	MS.gene70684	PPI
MS.gene062966	MS.gene057795	PPI
MS.gene057795	MS.gene062958	PPI
MS.gene057795	MS.gene003612	PPI
MS.gene057784	MS.gene057795	PPI
MS.gene057795	MS.gene062983	PPI
MS.gene057783	MS.gene057795	PPI
MS.gene062978	MS.gene057795	PPI
MS.gene50688	MS.gene057795	PPI
MS.gene057795	MS.gene062940	PPI
MS.gene057795	MS.gene062989	PPI
MS.gene057795	MS.gene003595	PPI
MS.gene057795	MS.gene062959	PPI
MS.gene50662	MS.gene057795	PPI
MS.gene50683	MS.gene057795	PPI
MS.gene057795	MS.gene50664	PPI
MS.gene003628	MS.gene057795	PPI
MS.gene057795	MS.gene057785	PPI
MS.gene057807	MS.gene057795	PPI
MS.gene057795	MS.gene50670	PPI
MS.gene003607	MS.gene057795	PPI
MS.gene003585	MS.gene057795	PPI
MS.gene057795	MS.gene70685	PPI
MS.gene003581	MS.gene057795	PPI
MS.gene057795	MS.gene062941	PPI
MS.gene50653	MS.gene057795	PPI
MS.gene057816	MS.gene057795	PPI
MS.gene003603	MS.gene057795	PPI
MS.gene062946	MS.gene057795	PPI
MS.gene057795	MS.gene50660	PPI
MS.gene057795	MS.gene003623	PPI
MS.gene062944	MS.gene057795	PPI
MS.gene057795	MS.gene057799	PPI
MS.gene057795	MS.gene057794	PPI
MS.gene057798	MS.gene057795	PPI
MS.gene057795	MS.gene003630	PPI
MS.gene057780	MS.gene057795	PPI
MS.gene057788	MS.gene057795	PPI
MS.gene50773	MS.gene057795	PPI
MS.gene062954	MS.gene057795	PPI
MS.gene50657	MS.gene057795	PPI
MS.gene057795	MS.gene062980	PPI
MS.gene057795	MS.gene23367	PPI
MS.gene50651	MS.gene057795	PPI
MS.gene50685	MS.gene057795	PPI
MS.gene062962	MS.gene057795	PPI
MS.gene057795	MS.gene057802	PPI
MS.gene77525	MS.gene057795	PPI
MS.gene003576	MS.gene057795	PPI
MS.gene057795	MS.gene057796	PPI
MS.gene057795	MS.gene50682	PPI
MS.gene062969	MS.gene057795	PPI
MS.gene057782	MS.gene057795	PPI
MS.gene23369	MS.gene057795	PPI
MS.gene057795	MS.gene003598	PPI
MS.gene057795	MS.gene50690	PPI
MS.gene003626	MS.gene057795	PPI
MS.gene062967	MS.gene057795	PPI
MS.gene057795	MS.gene50655	PPI
MS.gene057805	MS.gene057795	PPI
MS.gene062942	MS.gene057795	PPI
MS.gene057795	MS.gene003613	PPI
MS.gene057795	MS.gene003584	PPI
MS.gene057795	MS.gene057791	PPI
MS.gene003605	MS.gene057795	PPI
MS.gene062971	MS.gene057795	PPI
MS.gene23373	MS.gene057795	PPI
MS.gene057795	MS.gene062965	PPI
MS.gene062975	MS.gene057795	PPI
MS.gene057795	MS.gene50771	PPI
MS.gene50689	MS.gene057795	PPI
MS.gene057795	MS.gene022358	PPI
MS.gene50674	MS.gene057795	PPI
MS.gene057795	MS.gene062986	PPI
MS.gene003606	MS.gene057795	PPI
MS.gene057795	MS.gene50770	PPI
MS.gene057795	MS.gene062987	PPI
MS.gene057795	MS.gene057811	PPI
MS.gene057806	MS.gene057795	PPI
MS.gene057809	MS.gene057795	PPI
MS.gene057795	MS.gene062964	PPI
MS.gene50673	MS.gene057795	PPI
MS.gene057795	MS.gene50658	PPI
MS.gene062970	MS.gene057795	PPI
MS.gene057795	MS.gene057777	PPI
MS.gene057795	MS.gene28863	PPI
MS.gene057795	MS.gene062945	PPI
MS.gene057779	MS.gene057795	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057795.t1	MTR_4g072740	90.588	85	8	0	1	85	1	85	3.62e-55	165
MS.gene057795.t1	MTR_4g072490	88.235	85	10	0	1	85	1	85	9.41e-55	164
MS.gene057795.t1	MTR_4g072470	87.059	85	11	0	1	85	1	85	8.71e-52	157
MS.gene057795.t1	MTR_4g072465	87.209	86	10	1	1	85	1	86	1.21e-51	156
MS.gene057795.t1	MTR_4g072630	83.721	86	13	1	1	85	1	86	1.04e-50	154
MS.gene057795.t1	MTR_4g072580	83.529	85	14	0	1	85	1	85	2.94e-50	153
MS.gene057795.t1	MTR_4g072370	82.955	88	12	1	1	85	1	88	1.37e-49	151
MS.gene057795.t1	MTR_4g072830	85.057	87	10	1	1	84	1	87	1.90e-49	151
MS.gene057795.t1	MTR_4g072670	88.372	86	9	1	1	85	1	86	2.78e-47	145
MS.gene057795.t1	MTR_4g072600	78.824	85	18	0	1	85	1	85	2.28e-46	143
MS.gene057795.t1	MTR_4g072330	76.136	88	18	1	1	85	1	88	7.48e-46	142
MS.gene057795.t1	MTR_4g072540	84.884	86	12	1	1	85	1	86	1.58e-45	141
MS.gene057795.t1	MTR_4g072720	84.884	86	12	1	1	85	1	86	1.99e-45	140
MS.gene057795.t1	MTR_4g072650	78.824	85	17	1	1	85	1	84	2.40e-45	140
MS.gene057795.t1	MTR_4g072610	77.647	85	18	1	1	85	1	84	3.48e-45	140
MS.gene057795.t1	MTR_4g072510	82.558	86	14	1	1	85	1	86	1.06e-44	139
MS.gene057795.t1	MTR_3g084150	72.222	90	20	1	1	85	1	90	1.11e-44	139
MS.gene057795.t1	MTR_3g084170	73.333	90	19	1	1	85	1	90	1.18e-44	139
MS.gene057795.t1	MTR_4g072310	74.725	91	17	1	1	85	1	91	1.87e-44	138
MS.gene057795.t1	MTR_3g084180	71.111	90	21	1	1	85	1	90	6.40e-44	137
MS.gene057795.t1	MTR_4g072880	72.527	91	19	1	1	85	1	91	8.49e-44	137
MS.gene057795.t1	MTR_3g084240	72.222	90	20	1	1	85	1	90	1.39e-43	136
MS.gene057795.t1	MTR_3g110032	71.429	91	20	1	1	85	1	91	2.20e-43	135
MS.gene057795.t1	MTR_3g110038	71.111	90	21	1	1	85	1	90	2.66e-43	135
MS.gene057795.t1	MTR_4g072590	83.529	85	14	0	1	85	1	85	4.83e-43	134
MS.gene057795.t1	MTR_8g461410	68.889	90	23	1	1	85	1	90	5.50e-43	135
MS.gene057795.t1	MTR_4g072870	69.231	91	22	1	1	85	1	91	1.40e-42	134
MS.gene057795.t1	MTR_3g084220	70.000	90	22	1	1	85	1	90	2.31e-42	133
MS.gene057795.t1	MTR_4g072380	76.744	86	19	1	1	85	1	86	2.57e-42	133
MS.gene057795.t1	MTR_4g072690	82.353	85	15	0	1	85	1	85	4.10e-42	132
MS.gene057795.t1	MTR_5g008350	79.730	74	15	0	1	74	1	74	4.33e-42	132
MS.gene057795.t1	MTR_4g072860	73.626	91	18	1	1	85	1	91	8.06e-42	132
MS.gene057795.t1	MTR_4g050700	69.231	91	22	1	1	85	1	91	9.50e-42	132
MS.gene057795.t1	MTR_2g012410	69.231	91	22	1	1	85	1	91	9.50e-42	132
MS.gene057795.t1	MTR_4g072250	74.725	91	16	2	1	85	1	90	1.04e-41	131
MS.gene057795.t1	MTR_4g072820	76.744	86	18	2	1	85	1	85	1.41e-41	131
MS.gene057795.t1	MTR_4g072450	82.353	85	15	0	1	85	1	85	1.47e-41	131
MS.gene057795.t1	MTR_4g072270	69.231	91	22	1	1	85	1	91	3.83e-41	130
MS.gene057795.t1	MTR_4g072230	73.626	91	16	2	1	85	1	89	8.40e-41	129
MS.gene057795.t1	MTR_4g072240	65.934	91	25	1	1	85	1	91	2.09e-40	128
MS.gene057795.t1	MTR_4g072480	67.778	90	24	1	1	85	1	90	2.13e-40	128
MS.gene057795.t1	MTR_4g072850	71.739	92	19	1	1	85	1	92	2.90e-40	128
MS.gene057795.t1	MTR_3g084260	68.132	91	23	1	1	85	1	91	4.09e-40	127
MS.gene057795.t1	MTR_3g110042	69.663	89	22	1	1	84	1	89	1.19e-39	126
MS.gene057795.t1	MTR_3g117630	70.455	88	20	1	4	85	3	90	1.73e-39	126
MS.gene057795.t1	MTR_4g072220	64.835	91	26	1	1	85	1	91	3.44e-39	125
MS.gene057795.t1	MTR_4g072620	64.444	90	27	1	1	85	1	90	4.07e-39	125
MS.gene057795.t1	MTR_3g084250	67.778	90	24	1	1	85	1	90	4.11e-39	125
MS.gene057795.t1	MTR_4g072890	63.736	91	27	1	1	85	1	91	4.31e-39	125
MS.gene057795.t1	MTR_4g072570	67.778	90	24	1	1	85	1	90	5.23e-39	124
MS.gene057795.t1	MTR_4g072300	63.736	91	27	1	1	85	1	91	9.29e-39	124
MS.gene057795.t1	MTR_4g072460	65.556	90	26	1	1	85	1	90	1.00e-38	124
MS.gene057795.t1	MTR_4g072680	65.556	90	26	1	1	85	1	90	1.02e-38	124
MS.gene057795.t1	MTR_4g072500	68.132	91	22	2	1	85	1	90	1.81e-38	123
MS.gene057795.t1	MTR_4g072260	62.637	91	28	1	1	85	1	91	2.22e-38	123
MS.gene057795.t1	MTR_4g072640	68.132	91	22	2	1	85	1	90	7.04e-38	122
MS.gene057795.t1	MTR_4g072660	63.529	85	31	0	1	85	1	85	8.94e-38	121
MS.gene057795.t1	MTR_4g072730	62.222	90	29	1	1	85	1	90	2.20e-37	120
MS.gene057795.t1	MTR_3g084210	66.667	90	25	1	1	85	1	90	2.71e-37	120
MS.gene057795.t1	MTR_4g072530	65.934	91	24	2	1	85	1	90	3.41e-37	120
MS.gene057795.t1	MTR_3g084190	65.556	90	26	1	1	85	1	90	9.17e-37	119
MS.gene057795.t1	MTR_8g461420	66.667	90	25	1	1	85	1	90	9.17e-37	119
MS.gene057795.t1	MTR_3g084230	65.556	90	26	1	1	85	1	90	4.08e-36	117
MS.gene057795.t1	MTR_5g008360	69.231	78	24	0	8	85	4	81	1.16e-35	116
MS.gene057795.t1	MTR_3g084160	65.934	91	24	2	1	85	1	90	1.23e-35	116
MS.gene057795.t1	MTR_3g110045	67.045	88	24	1	3	85	62	149	3.89e-35	117
MS.gene057795.t1	MTR_5g008370	65.556	90	26	1	1	85	1	90	4.85e-35	116
MS.gene057795.t1	MTR_4g072940	67.778	90	22	1	3	85	33	122	9.72e-35	115
MS.gene057795.t1	MTR_3g084200	69.444	72	17	1	1	67	1	72	5.16e-32	107
MS.gene057795.t1	MTR_4g072560	68.657	67	20	1	19	84	31	97	1.74e-31	106
MS.gene057795.t1	MTR_4g072980	53.261	92	35	2	1	84	1	92	4.84e-31	104
MS.gene057795.t1	MTR_4g072910	66.234	77	24	1	9	85	26	100	1.20e-30	103
MS.gene057795.t1	MTR_4g072770	71.212	66	19	0	20	85	15	80	2.10e-30	102
MS.gene057795.t1	MTR_4g072550	64.789	71	25	0	15	85	31	101	7.07e-30	102
MS.gene057795.t1	MTR_3g117640	49.000	100	36	2	1	85	1	100	3.52e-29	100
MS.gene057795.t1	MTR_4g072290	61.176	85	25	1	1	85	1	77	8.34e-29	98.6
MS.gene057795.t1	MTR_3g110035	65.625	64	22	0	22	85	73	136	3.72e-26	94.0
MS.gene057795.t1	MTR_4g072750	63.514	74	18	2	1	66	1	73	1.69e-24	88.2
MS.gene057795.t1	MTR_4g072930	52.500	80	34	1	10	85	31	110	1.23e-23	86.7
MS.gene057795.t1	MTR_4g072280	57.333	75	26	1	1	69	1	75	2.66e-23	84.7
MS.gene057795.t1	MTR_6g077850	56.716	67	29	0	19	85	33	99	5.63e-23	84.7
MS.gene057795.t1	MTR_4g072190	51.852	81	34	2	8	84	20	99	9.73e-23	84.0
MS.gene057795.t1	MTR_3g113310	56.716	67	28	1	18	84	40	105	9.93e-23	84.3
MS.gene057795.t1	MTR_3g117610	60.000	65	25	1	18	82	43	106	1.43e-22	84.0
MS.gene057795.t1	MTR_8g461400	46.667	90	17	2	1	85	1	64	7.84e-20	75.9
MS.gene057795.t1	MTR_5g021820	54.545	66	29	1	19	84	39	103	3.20e-19	75.1
MS.gene057795.t1	MTR_4g072840	50.000	86	16	3	1	85	1	60	4.26e-19	73.6
MS.gene057795.t1	MTR_8g076040	56.250	64	27	1	19	82	40	102	9.89e-19	73.9
MS.gene057795.t1	MTR_4g124750	51.351	74	34	2	5	77	53	125	2.03e-17	72.0
MS.gene057795.t1	MTR_2g043960	55.932	59	25	1	19	77	75	132	4.08e-17	71.2
MS.gene057795.t1	MTR_1g094750	54.839	62	27	1	19	80	49	109	1.09e-16	68.9
MS.gene057795.t1	MTR_1g009150	52.174	69	32	1	12	80	63	130	2.07e-16	70.1
MS.gene057795.t1	MTR_1g063950	47.059	68	35	1	13	80	41	107	2.24e-15	65.9
MS.gene057795.t1	MTR_7g101740	51.562	64	30	1	19	82	39	101	2.93e-15	65.5
MS.gene057795.t1	MTR_1g061570	50.685	73	33	2	10	80	7	78	5.83e-15	65.1
MS.gene057795.t1	MTR_3g105900	69.048	42	13	0	19	60	1171	1212	8.11e-15	68.2
MS.gene057795.t1	MTR_4g005310	46.970	66	34	1	16	80	58	123	8.58e-15	65.1
MS.gene057795.t1	MTR_1g024085	46.667	75	38	2	4	77	20	93	9.32e-15	65.1
MS.gene057795.t1	MTR_4g005320	50.820	61	29	1	20	80	70	129	1.41e-14	64.7
MS.gene057795.t1	MTR_7g118010	38.554	83	48	2	5	85	8	89	2.66e-14	62.8
MS.gene057795.t1	MTR_3g109160	48.052	77	39	1	4	80	53	128	3.76e-14	63.9
MS.gene057795.t1	MTR_4g072160	47.887	71	36	1	10	80	27	96	4.75e-14	62.8
MS.gene057795.t1	MTR_3g092220	36.471	85	51	2	3	85	16	99	6.43e-14	62.0
MS.gene057795.t1	MTR_0388s0020	42.857	77	40	2	11	84	66	141	9.24e-14	62.4
MS.gene057795.t1	MTR_5g008380	84.375	32	5	0	54	85	246	277	4.64e-13	62.4
MS.gene057795.t1	MTR_8g461210	47.458	59	30	1	19	77	34	91	2.64e-12	57.8
MS.gene057795.t1	MTR_8g026730	39.706	68	38	2	20	85	27	93	1.11e-11	56.2
MS.gene057795.t1	MTR_4g021810	47.761	67	33	2	12	77	18	83	5.31e-11	54.3
MS.gene057795.t1	MTR_7g405740	35.526	76	48	1	5	80	52	126	7.08e-11	55.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057795.t1	AT4G38840	72.059	68	18	1	19	85	32	99	2.56e-33	110
MS.gene057795.t1	AT5G18020	63.514	74	26	1	13	85	17	90	4.52e-31	104
MS.gene057795.t1	AT5G18080	59.494	79	30	2	8	85	13	90	9.26e-31	103
MS.gene057795.t1	AT5G18050	58.228	79	31	2	8	85	13	90	1.32e-30	103
MS.gene057795.t1	AT5G18030	60.759	79	27	2	8	85	13	88	1.33e-30	103
MS.gene057795.t1	AT5G18060	59.494	79	30	2	8	85	13	90	1.37e-30	103
MS.gene057795.t1	AT2G21200	61.842	76	28	1	10	84	11	86	2.98e-30	102
MS.gene057795.t1	AT4G38825	62.500	72	26	1	15	85	18	89	4.04e-30	102
MS.gene057795.t1	AT2G21210	59.211	76	29	1	12	85	20	95	4.99e-30	102
MS.gene057795.t1	AT5G18010	58.228	79	31	2	8	85	13	90	9.99e-30	101
MS.gene057795.t1	AT2G21210	59.211	76	29	1	12	85	87	162	2.58e-29	102
MS.gene057795.t1	AT4G34810	70.000	70	16	2	20	84	48	117	2.63e-29	101
MS.gene057795.t1	AT4G38850	58.025	81	27	2	8	85	13	89	6.12e-29	99.4
MS.gene057795.t1	AT4G34800	58.333	84	31	2	1	80	1	84	1.13e-28	99.0
MS.gene057795.t1	AT3G03820	58.442	77	29	1	12	85	19	95	9.36e-28	96.7
MS.gene057795.t1	AT3G03840	57.895	76	30	1	12	85	19	94	1.41e-27	96.3
MS.gene057795.t1	AT4G13790	51.899	79	36	1	8	84	13	91	5.32e-27	94.7
MS.gene057795.t1	AT4G34770	61.333	75	27	1	13	85	28	102	1.22e-26	94.0
MS.gene057795.t1	AT3G03850	64.179	67	22	1	21	85	26	92	3.05e-26	92.8
MS.gene057795.t1	AT3G03830	55.000	80	33	1	9	85	13	92	1.77e-25	90.9
MS.gene057795.t1	AT4G34790	63.077	65	22	1	20	82	39	103	5.04e-24	87.4
MS.gene057795.t1	AT4G38860	58.824	68	28	0	18	85	38	105	5.18e-24	87.4
MS.gene057795.t1	AT4G34780	60.000	70	25	1	18	84	26	95	4.84e-23	85.1
MS.gene057795.t1	AT2G21220	57.353	68	28	1	18	85	38	104	5.85e-22	82.4
MS.gene057795.t1	AT1G75580	47.619	84	43	1	1	84	25	107	5.53e-21	79.7
MS.gene057795.t1	AT4G34760	56.923	65	27	1	18	82	41	104	1.85e-20	78.6
MS.gene057795.t1	AT4G36110	57.812	64	26	1	19	82	39	101	4.87e-20	77.4
MS.gene057795.t1	AT2G16580	55.385	65	28	1	18	82	42	105	1.07e-19	76.6
MS.gene057795.t1	AT1G19830	56.338	71	29	2	15	84	43	112	4.04e-18	72.8
MS.gene057795.t1	AT2G18010	53.125	64	29	1	19	82	47	109	4.83e-18	72.4
MS.gene057795.t1	AT3G43120	54.237	59	26	1	19	77	78	135	1.25e-17	72.8
MS.gene057795.t1	AT5G20810	55.932	59	25	1	19	77	78	135	9.55e-17	70.5
MS.gene057795.t1	AT5G20810	55.932	59	25	1	19	77	78	135	1.48e-16	70.5
MS.gene057795.t1	AT5G66260	45.349	86	38	3	8	85	14	98	2.59e-15	65.1
MS.gene057795.t1	AT2G37030	52.381	63	29	1	19	81	48	109	3.40e-15	65.5
MS.gene057795.t1	AT3G51200	46.154	78	36	3	8	80	23	99	4.12e-15	64.7
MS.gene057795.t1	AT3G61900	40.964	83	45	2	6	85	16	97	1.52e-14	64.3
MS.gene057795.t1	AT1G75590	52.542	59	27	1	19	77	41	98	2.44e-14	63.9
MS.gene057795.t1	AT3G20220	47.692	65	32	2	20	83	47	110	2.53e-14	63.2
MS.gene057795.t1	AT1G19840	47.368	76	37	2	4	77	23	97	2.72e-14	63.9
MS.gene057795.t1	AT5G10990	47.887	71	33	2	7	77	31	97	4.63e-14	63.2
MS.gene057795.t1	AT4G34750	45.312	64	34	1	19	82	36	98	4.82e-14	63.2
MS.gene057795.t1	AT4G34750	45.312	64	34	1	19	82	36	98	4.82e-14	63.2
MS.gene057795.t1	AT2G45210	44.444	72	36	2	16	84	75	145	1.24e-13	62.4
MS.gene057795.t1	AT4G31320	47.887	71	36	1	10	80	70	139	2.18e-13	62.4
MS.gene057795.t1	AT3G53250	46.032	63	30	1	19	81	51	109	3.16e-13	60.5
MS.gene057795.t1	AT2G46690	41.667	72	38	2	9	77	13	83	5.13e-13	60.1
MS.gene057795.t1	AT2G24400	47.887	71	36	1	10	80	54	123	5.93e-13	60.8
MS.gene057795.t1	AT4G22620	40.244	82	45	2	6	84	65	145	6.20e-13	60.5
MS.gene057795.t1	AT3G53250	46.032	63	30	1	19	81	82	140	6.43e-13	60.5
MS.gene057795.t1	AT4G12410	44.118	68	34	2	20	84	76	142	1.26e-11	57.0
MS.gene057795.t1	AT4G00880	42.857	77	39	3	3	77	13	86	2.01e-11	55.8

Find 19 sgRNAs with CRISPR-Local

Find 21 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAGCTTGGCTCAACAATTCT+TGG	0.248657	4.4:-36668222	None:intergenic
ACAATTCTTGGAATGAAGTT+TGG	0.300739	4.4:-36668210	None:intergenic
GTTTGGTTCAAATATGATAT+AGG	0.366300	4.4:-36668193	None:intergenic
TACACTGCTAGATATCCCTT+TGG	0.477829	4.4:-36668139	None:intergenic
TTCTGATGATACTAGGAAAA+CGG	0.480646	4.4:-36668087	None:intergenic
ATTCAAATTGTTCCTCAGCT+TGG	0.486351	4.4:-36668237	None:intergenic
GATGCCCTTCTGATGATACT+AGG	0.508667	4.4:-36668094	None:intergenic
ATTTGAATTCGAGCATCCAA+TGG	0.533591	4.4:+36668252	MS.gene057795:CDS
TTTGAATTCGAGCATCCAAT+GGG	0.538697	4.4:+36668253	MS.gene057795:CDS
AAAAGCTGTGGACGTTCCAA+AGG	0.541170	4.4:+36668123	MS.gene057795:CDS
AACGTCTTCTCTGCAAGGAA+TGG	0.552546	4.4:-36668284	None:intergenic
GGCATCATCTTCAAAAGCTG+TGG	0.574105	4.4:+36668111	MS.gene057795:CDS
AAGAAAACGTCTTCTCTGCA+AGG	0.585314	4.4:-36668289	None:intergenic
AAAGCTGTGGACGTTCCAAA+GGG	0.607015	4.4:+36668124	MS.gene057795:CDS
GGAATGGTAAGACCACCCAT+TGG	0.623464	4.4:-36668268	None:intergenic
GAATTCGAGCATCCAATGGG+TGG	0.626831	4.4:+36668256	MS.gene057795:CDS
AGAATTGTTGAGCCAAGCTG+AGG	0.641874	4.4:+36668225	MS.gene057795:CDS
GGATATCTAGCAGTGTACGT+AGG	0.713792	4.4:+36668145	MS.gene057795:CDS
ACGTAGGAGAGAAAATGAAG+CGG	0.744637	4.4:+36668161	MS.gene057795:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GTTTGGTTCAAATATGATAT+AGG	-	chr4.4:36668196-36668215	None:intergenic	25.0%
	ACAATTCTTGGAATGAAGTT+TGG	-	chr4.4:36668213-36668232	None:intergenic	30.0%
	TTCTGATGATACTAGGAAAA+CGG	-	chr4.4:36668090-36668109	None:intergenic	30.0%
!	TTTTCCTAGTATCATCAGAA+GGG	+	chr4.4:36668090-36668109	MS.gene057795:CDS	30.0%
	ATTCAAATTGTTCCTCAGCT+TGG	-	chr4.4:36668240-36668259	None:intergenic	35.0%
	ATTTGAATTCGAGCATCCAA+TGG	+	chr4.4:36668252-36668271	MS.gene057795:CDS	35.0%
	TTTGAATTCGAGCATCCAAT+GGG	+	chr4.4:36668253-36668272	MS.gene057795:CDS	35.0%
!	GTTTTCCTAGTATCATCAGA+AGG	+	chr4.4:36668089-36668108	MS.gene057795:CDS	35.0%
	AAGAAAACGTCTTCTCTGCA+AGG	-	chr4.4:36668292-36668311	None:intergenic	40.0%
	ACGTAGGAGAGAAAATGAAG+CGG	+	chr4.4:36668161-36668180	MS.gene057795:CDS	40.0%
	TACACTGCTAGATATCCCTT+TGG	-	chr4.4:36668142-36668161	None:intergenic	40.0%
	AAAAGCTGTGGACGTTCCAA+AGG	+	chr4.4:36668123-36668142	MS.gene057795:CDS	45.0%
	AAAGCTGTGGACGTTCCAAA+GGG	+	chr4.4:36668124-36668143	MS.gene057795:CDS	45.0%
	AACGTCTTCTCTGCAAGGAA+TGG	-	chr4.4:36668287-36668306	None:intergenic	45.0%
	AGAATTGTTGAGCCAAGCTG+AGG	+	chr4.4:36668225-36668244	MS.gene057795:CDS	45.0%
	CAGCTTGGCTCAACAATTCT+TGG	-	chr4.4:36668225-36668244	None:intergenic	45.0%
	GATGCCCTTCTGATGATACT+AGG	-	chr4.4:36668097-36668116	None:intergenic	45.0%
	GGATATCTAGCAGTGTACGT+AGG	+	chr4.4:36668145-36668164	MS.gene057795:CDS	45.0%
	GGCATCATCTTCAAAAGCTG+TGG	+	chr4.4:36668111-36668130	MS.gene057795:CDS	45.0%
	GAATTCGAGCATCCAATGGG+TGG	+	chr4.4:36668256-36668275	MS.gene057795:CDS	50.0%
	GGAATGGTAAGACCACCCAT+TGG	-	chr4.4:36668271-36668290	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	36668079	36668336	36668079	ID=MS.gene057795
chr4.4	mRNA	36668079	36668336	36668079	ID=MS.gene057795.t1;Parent=MS.gene057795
chr4.4	exon	36668079	36668336	36668079	ID=MS.gene057795.t1.exon1;Parent=MS.gene057795.t1
chr4.4	CDS	36668079	36668336	36668079	ID=cds.MS.gene057795.t1;Parent=MS.gene057795.t1

Gene Sequence	>MS.gene057795 ATGGGTTTCCGTTTTCCTAGTATCATCAGAAGGGCATCATCTTCAAAAGCTGTGGACGTTCCAAAGGGATATCTAGCAGTGTACGTAGGAGAGAAAATGAAGCGGTTTGTGATTCCTATATCATATTTGAACCAAACTTCATTCCAAGAATTGTTGAGCCAAGCTGAGGAACAATTTGAATTCGAGCATCCAATGGGTGGTCTTACCATTCCTTGCAGAGAAGACGTTTTCTTAGATATCACTTCTCGCTTGAATTGA
Protein sequence	>MS.gene057795.t1 MGFRFPSIIRRASSSKAVDVPKGYLAVYVGEKMKRFVIPISYLNQTSFQELLSQAEEQFEFEHPMGGLTIPCREDVFLDITSRLN