AlfalfaGEDB | MS.gene003627

M. sativa cultivar XinJiangDaYe / MS.gene003627

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003627.t1	AES89298.1	94.6	93	4	1	1	93	1	92	3.60E-41	177.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003627.t1	P33083	82.4	91	15	1	1	91	1	90	7.8e-37	154.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003627.t1	G7JL23	94.6	93	4	1	1	93	1	92	2.6e-41	177.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene003627	MS.gene057785	PPI
MS.gene003627	MS.gene70683	PPI
MS.gene003627	MS.gene50670	PPI
MS.gene062975	MS.gene003627	PPI
MS.gene003627	MS.gene50669	PPI
MS.gene003627	MS.gene70685	PPI
MS.gene50689	MS.gene003627	PPI
MS.gene003627	MS.gene062941	PPI
MS.gene50674	MS.gene003627	PPI
MS.gene003627	MS.gene50660	PPI
MS.gene003627	MS.gene003623	PPI
MS.gene003606	MS.gene003627	PPI
MS.gene057806	MS.gene003627	PPI
MS.gene003627	MS.gene057794	PPI
MS.gene003627	MS.gene50688	PPI
MS.gene003627	MS.gene003629	PPI
MS.gene50673	MS.gene003627	PPI
MS.gene062970	MS.gene003627	PPI
MS.gene003627	MS.gene062980	PPI
MS.gene003627	MS.gene23367	PPI
MS.gene003627	MS.gene003610	PPI
MS.gene003597	MS.gene003627	PPI
MS.gene003593	MS.gene003627	PPI
MS.gene003627	MS.gene057802	PPI
MS.gene003627	MS.gene50773	PPI
MS.gene003627	MS.gene057796	PPI
MS.gene062972	MS.gene003627	PPI
MS.gene003627	MS.gene50682	PPI
MS.gene003627	MS.gene50653	PPI
MS.gene003580	MS.gene003627	PPI
MS.gene003627	MS.gene003598	PPI
MS.gene003627	MS.gene50690	PPI
MS.gene003582	MS.gene003627	PPI
MS.gene003627	MS.gene057780	PPI
MS.gene057800	MS.gene003627	PPI
MS.gene003627	MS.gene057788	PPI
MS.gene003627	MS.gene50685	PPI
MS.gene003627	MS.gene003613	PPI
MS.gene50772	MS.gene003627	PPI
MS.gene003627	MS.gene057799	PPI
MS.gene057809	MS.gene003627	PPI
MS.gene062966	MS.gene003627	PPI
MS.gene003627	MS.gene003630	PPI
MS.gene057783	MS.gene003627	PPI
MS.gene062978	MS.gene003627	PPI
MS.gene003627	MS.gene057779	PPI
MS.gene003627	MS.gene062965	PPI
MS.gene003627	MS.gene50771	PPI
MS.gene003627	MS.gene022358	PPI
MS.gene50662	MS.gene003627	PPI
MS.gene003628	MS.gene003627	PPI
MS.gene003627	MS.gene23369	PPI
MS.gene057807	MS.gene003627	PPI
MS.gene003627	MS.gene062986	PPI
MS.gene003627	MS.gene50770	PPI
MS.gene003627	MS.gene062987	PPI
MS.gene003627	MS.gene057811	PPI
MS.gene003585	MS.gene003627	PPI
MS.gene003627	MS.gene062964	PPI
MS.gene003627	MS.gene062944	PPI
MS.gene003627	MS.gene50658	PPI
MS.gene003627	MS.gene50655	PPI
MS.gene003627	MS.gene28863	PPI
MS.gene057816	MS.gene003627	PPI
MS.gene003627	MS.gene003584	PPI
MS.gene003603	MS.gene003627	PPI
MS.gene003627	MS.gene062945	PPI
MS.gene062946	MS.gene003627	PPI
MS.gene003627	MS.gene057791	PPI
MS.gene003627	MS.gene057804	PPI
MS.gene003627	MS.gene50651	PPI
MS.gene003627	MS.gene50656	PPI
MS.gene062954	MS.gene003627	PPI
MS.gene50657	MS.gene003627	PPI
MS.gene003627	MS.gene50666	PPI
MS.gene003627	MS.gene062985	PPI
MS.gene003627	MS.gene057784	PPI
MS.gene062962	MS.gene003627	PPI
MS.gene003627	MS.gene062953	PPI
MS.gene50683	MS.gene003627	PPI
MS.gene003627	MS.gene003622	PPI
MS.gene77525	MS.gene003627	PPI
MS.gene003576	MS.gene003627	PPI
MS.gene003627	MS.gene003599	PPI
MS.gene003627	MS.gene23368	PPI
MS.gene062969	MS.gene003627	PPI
MS.gene057782	MS.gene003627	PPI
MS.gene003627	MS.gene057817	PPI
MS.gene003627	MS.gene50668	PPI
MS.gene003627	MS.gene003581	PPI
MS.gene003627	MS.gene70684	PPI
MS.gene003627	MS.gene062958	PPI
MS.gene003627	MS.gene057798	PPI
MS.gene003626	MS.gene003627	PPI
MS.gene003627	MS.gene003612	PPI
MS.gene003627	MS.gene062983	PPI
MS.gene003627	MS.gene057777	PPI
MS.gene003627	MS.gene062967	PPI
MS.gene057805	MS.gene003627	PPI
MS.gene062942	MS.gene003627	PPI
MS.gene003605	MS.gene003627	PPI
MS.gene003627	MS.gene003579	PPI
MS.gene003627	MS.gene062940	PPI
MS.gene003627	MS.gene062989	PPI
MS.gene003627	MS.gene003595	PPI
MS.gene003627	MS.gene062959	PPI
MS.gene003627	MS.gene003607	PPI
MS.gene062971	MS.gene003627	PPI
MS.gene23373	MS.gene003627	PPI
MS.gene003627	MS.gene50686	PPI
MS.gene003627	MS.gene50664	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003627.t1	MTR_4g072250	94.624	93	4	1	1	93	1	92	2.37e-60	179
MS.gene003627.t1	MTR_4g072310	87.097	93	12	0	1	93	1	93	1.14e-58	174
MS.gene003627.t1	MTR_4g072880	84.946	93	14	0	1	93	1	93	7.44e-58	172
MS.gene003627.t1	MTR_4g072270	82.796	93	16	0	1	93	1	93	6.37e-55	165
MS.gene003627.t1	MTR_4g072230	83.871	93	13	1	1	93	1	91	1.00e-54	164
MS.gene003627.t1	MTR_4g072860	81.720	93	17	0	1	93	1	93	1.21e-53	162
MS.gene003627.t1	MTR_3g084150	78.495	93	19	1	1	93	1	92	5.64e-52	157
MS.gene003627.t1	MTR_8g461410	77.419	93	20	1	1	93	1	92	1.27e-51	157
MS.gene003627.t1	MTR_3g084170	78.495	93	19	1	1	93	1	92	2.62e-51	156
MS.gene003627.t1	MTR_3g084180	77.419	93	20	1	1	93	1	92	4.59e-51	155
MS.gene003627.t1	MTR_4g072500	76.344	93	21	1	1	93	1	92	2.09e-50	154
MS.gene003627.t1	MTR_3g084240	77.419	93	20	1	1	93	1	92	2.38e-50	154
MS.gene003627.t1	MTR_3g084220	76.344	93	21	1	1	93	1	92	1.06e-49	152
MS.gene003627.t1	MTR_3g110032	74.194	93	24	0	1	93	1	93	2.80e-49	151
MS.gene003627.t1	MTR_4g050700	74.194	93	24	0	1	93	1	93	5.98e-49	150
MS.gene003627.t1	MTR_2g012410	74.194	93	24	0	1	93	1	93	5.98e-49	150
MS.gene003627.t1	MTR_4g072640	78.022	91	19	1	1	91	1	90	7.47e-49	150
MS.gene003627.t1	MTR_3g110038	75.269	93	22	1	1	93	1	92	1.11e-48	149
MS.gene003627.t1	MTR_4g072240	73.626	91	24	0	1	91	1	91	1.28e-48	149
MS.gene003627.t1	MTR_4g072850	82.609	92	15	1	1	91	1	92	1.36e-48	149
MS.gene003627.t1	MTR_4g072530	75.824	91	21	1	1	91	1	90	1.77e-48	149
MS.gene003627.t1	MTR_3g117630	83.133	83	14	0	9	91	8	90	7.40e-48	147
MS.gene003627.t1	MTR_4g072480	75.269	93	22	1	1	93	1	92	8.53e-48	147
MS.gene003627.t1	MTR_4g072620	75.269	93	22	1	1	93	1	92	1.70e-47	146
MS.gene003627.t1	MTR_4g072680	75.269	93	22	1	1	93	1	92	2.47e-47	146
MS.gene003627.t1	MTR_4g072570	75.269	93	22	1	1	93	1	92	3.05e-47	145
MS.gene003627.t1	MTR_3g084260	73.118	93	25	0	1	93	1	93	3.95e-47	145
MS.gene003627.t1	MTR_4g072730	76.087	92	21	1	1	92	1	91	4.43e-47	145
MS.gene003627.t1	MTR_3g110042	79.545	88	17	1	1	88	1	87	5.29e-47	145
MS.gene003627.t1	MTR_4g072220	68.817	93	29	0	1	93	1	93	3.83e-46	143
MS.gene003627.t1	MTR_4g072460	74.194	93	23	1	1	93	1	92	4.84e-46	143
MS.gene003627.t1	MTR_4g072300	69.231	91	28	0	1	91	1	91	6.25e-46	142
MS.gene003627.t1	MTR_4g072870	69.231	91	28	0	1	91	1	91	1.17e-45	142
MS.gene003627.t1	MTR_3g084250	70.968	93	26	1	1	93	1	92	3.61e-45	140
MS.gene003627.t1	MTR_4g072370	74.725	91	20	1	1	91	1	88	4.82e-45	140
MS.gene003627.t1	MTR_4g072940	79.348	92	18	1	3	93	33	124	9.64e-45	140
MS.gene003627.t1	MTR_4g072580	74.725	91	17	1	1	91	1	85	1.27e-44	139
MS.gene003627.t1	MTR_4g072890	68.132	91	29	0	1	91	1	91	3.04e-44	138
MS.gene003627.t1	MTR_4g072830	76.667	90	18	1	1	90	1	87	3.48e-44	138
MS.gene003627.t1	MTR_4g072610	76.923	91	14	1	1	91	1	84	7.68e-44	137
MS.gene003627.t1	MTR_4g072740	74.725	91	17	1	1	91	1	85	8.23e-44	137
MS.gene003627.t1	MTR_4g072260	65.591	93	32	0	1	93	1	93	1.08e-43	137
MS.gene003627.t1	MTR_4g072330	70.330	91	24	1	1	91	1	88	1.21e-43	137
MS.gene003627.t1	MTR_4g072490	72.527	91	19	1	1	91	1	85	1.25e-43	136
MS.gene003627.t1	MTR_5g008370	72.632	95	19	2	1	92	1	91	9.84e-43	136
MS.gene003627.t1	MTR_5g008360	77.215	79	18	0	15	93	5	83	1.23e-42	134
MS.gene003627.t1	MTR_4g072660	68.817	93	23	1	1	93	1	87	2.89e-42	133
MS.gene003627.t1	MTR_4g072470	71.429	91	20	1	1	91	1	85	1.70e-41	131
MS.gene003627.t1	MTR_4g072650	72.527	91	18	1	1	91	1	84	3.21e-41	130
MS.gene003627.t1	MTR_4g072820	71.739	92	18	2	1	91	1	85	6.69e-41	129
MS.gene003627.t1	MTR_4g072540	71.429	91	21	1	1	91	1	86	7.71e-41	129
MS.gene003627.t1	MTR_3g084210	72.043	93	25	1	1	93	1	92	1.13e-40	129
MS.gene003627.t1	MTR_4g072630	69.231	91	23	1	1	91	1	86	1.51e-40	129
MS.gene003627.t1	MTR_4g072290	67.742	93	16	1	1	93	1	79	1.60e-40	128
MS.gene003627.t1	MTR_8g461420	68.817	93	28	1	1	93	1	92	2.85e-40	128
MS.gene003627.t1	MTR_3g084190	69.231	91	27	1	1	91	1	90	3.75e-40	128
MS.gene003627.t1	MTR_4g072600	69.231	91	22	1	1	91	1	85	6.89e-40	127
MS.gene003627.t1	MTR_4g072465	69.231	91	23	2	1	91	1	86	8.90e-40	127
MS.gene003627.t1	MTR_3g084230	73.118	93	24	1	1	93	1	92	1.22e-39	127
MS.gene003627.t1	MTR_4g072670	70.330	91	22	1	1	91	1	86	2.01e-39	126
MS.gene003627.t1	MTR_4g072380	69.231	91	23	2	1	91	1	86	8.98e-39	124
MS.gene003627.t1	MTR_4g072550	65.957	94	26	2	4	93	12	103	1.68e-38	124
MS.gene003627.t1	MTR_4g072720	69.231	91	23	1	1	91	1	86	2.29e-38	123
MS.gene003627.t1	MTR_3g110045	73.626	91	23	1	3	93	62	151	3.23e-38	125
MS.gene003627.t1	MTR_3g084160	70.330	91	26	1	1	91	1	90	4.28e-38	122
MS.gene003627.t1	MTR_4g072590	69.231	91	22	1	1	91	1	85	1.04e-37	121
MS.gene003627.t1	MTR_4g072510	68.132	91	24	1	1	91	1	86	3.36e-37	120
MS.gene003627.t1	MTR_3g084200	72.603	73	19	1	1	73	1	72	2.36e-35	116
MS.gene003627.t1	MTR_4g072690	65.934	91	25	1	1	91	1	85	3.13e-34	112
MS.gene003627.t1	MTR_4g072560	54.082	98	38	2	1	91	1	98	3.89e-34	113
MS.gene003627.t1	MTR_4g072910	70.270	74	22	0	18	91	27	100	5.54e-34	112
MS.gene003627.t1	MTR_5g008350	67.500	80	20	1	1	80	1	74	1.56e-33	110
MS.gene003627.t1	MTR_4g072980	55.789	95	40	2	1	93	1	95	2.28e-33	111
MS.gene003627.t1	MTR_4g072450	64.835	91	26	1	1	91	1	85	2.57e-33	110
MS.gene003627.t1	MTR_4g072770	74.242	66	17	0	26	91	15	80	8.73e-32	106
MS.gene003627.t1	MTR_3g117640	68.116	69	21	1	25	92	33	101	3.32e-31	105
MS.gene003627.t1	MTR_3g110035	68.182	66	21	0	28	93	73	138	1.98e-29	102
MS.gene003627.t1	MTR_4g072750	66.667	75	22	2	1	73	1	74	5.04e-29	99.8
MS.gene003627.t1	MTR_4g072280	61.333	75	29	0	1	75	1	75	5.17e-29	99.8
MS.gene003627.t1	MTR_8g461400	53.763	93	16	2	1	93	1	66	3.98e-27	94.4
MS.gene003627.t1	MTR_3g113310	59.701	67	26	1	24	90	40	105	1.20e-26	94.4
MS.gene003627.t1	MTR_6g077850	58.209	67	28	0	25	91	33	99	7.33e-26	92.4
MS.gene003627.t1	MTR_3g117610	63.077	65	23	1	24	88	43	106	1.06e-25	92.0
MS.gene003627.t1	MTR_4g072190	61.194	67	25	1	24	90	34	99	2.05e-25	91.3
MS.gene003627.t1	MTR_4g072930	53.086	81	32	2	17	91	30	110	2.65e-23	86.3
MS.gene003627.t1	MTR_5g021820	56.061	66	28	1	25	90	39	103	1.98e-22	83.6
MS.gene003627.t1	MTR_8g076040	57.812	64	26	1	25	88	40	102	2.85e-22	83.2
MS.gene003627.t1	MTR_4g072840	50.000	92	13	3	1	91	1	60	1.44e-20	77.8
MS.gene003627.t1	MTR_2g043960	56.452	62	26	1	25	86	75	135	1.83e-18	75.1
MS.gene003627.t1	MTR_4g124750	54.688	64	28	1	25	88	68	130	3.53e-18	74.3
MS.gene003627.t1	MTR_1g024085	54.286	70	28	2	15	84	29	94	1.76e-17	72.4
MS.gene003627.t1	MTR_1g061570	45.882	85	42	2	8	92	4	84	3.19e-17	71.2
MS.gene003627.t1	MTR_1g094750	49.383	81	37	2	9	86	30	109	3.91e-17	70.5
MS.gene003627.t1	MTR_1g009150	57.377	61	25	1	26	86	71	130	1.19e-16	70.9
MS.gene003627.t1	MTR_7g118010	50.000	68	31	2	26	91	23	89	1.29e-16	68.9
MS.gene003627.t1	MTR_4g025830	47.059	68	32	2	26	90	79	145	1.99e-16	70.1
MS.gene003627.t1	MTR_8g461210	43.956	91	47	3	4	92	14	102	2.30e-16	68.6
MS.gene003627.t1	MTR_4g005310	48.485	66	33	1	22	86	58	123	3.58e-16	68.9
MS.gene003627.t1	MTR_3g092220	51.515	66	29	2	21	84	28	92	3.76e-16	68.2
MS.gene003627.t1	MTR_4g005320	54.098	61	27	1	26	86	70	129	4.12e-16	69.3
MS.gene003627.t1	MTR_4g072160	53.226	62	28	1	25	86	36	96	2.25e-15	66.6
MS.gene003627.t1	MTR_8g026730	45.588	68	34	2	26	91	27	93	3.39e-15	65.5
MS.gene003627.t1	MTR_3g105900	78.947	38	8	0	23	60	1169	1206	3.73e-15	69.3
MS.gene003627.t1	MTR_3g109160	52.239	67	31	1	26	92	69	134	5.84e-15	66.2
MS.gene003627.t1	MTR_7g101740	50.000	64	31	1	25	88	39	101	1.64e-14	63.9
MS.gene003627.t1	MTR_0388s0020	43.478	69	35	2	25	90	74	141	2.17e-14	64.3
MS.gene003627.t1	MTR_1g063950	49.153	59	29	1	25	83	47	104	2.78e-14	63.5
MS.gene003627.t1	MTR_3g098970	37.037	81	49	2	13	93	41	119	3.96e-14	63.5
MS.gene003627.t1	MTR_1g059770	40.000	65	38	1	26	90	49	112	2.15e-13	61.2
MS.gene003627.t1	MTR_8g101520	46.154	65	34	1	27	91	51	114	1.18e-12	60.1
MS.gene003627.t1	MTR_2g095430	50.000	58	24	2	25	78	44	100	2.55e-12	58.5
MS.gene003627.t1	MTR_4g021810	51.613	62	28	2	26	86	26	86	3.54e-12	57.8
MS.gene003627.t1	MTR_3g097120	41.772	79	37	2	21	91	4	81	3.55e-12	57.8
MS.gene003627.t1	MTR_7g405740	45.902	61	32	1	26	86	67	126	5.03e-12	58.5
MS.gene003627.t1	MTR_7g104940	38.710	62	37	1	29	90	53	113	7.38e-12	57.4
MS.gene003627.t1	MTR_8g096470	43.333	60	33	1	27	86	47	105	3.44e-11	55.1
MS.gene003627.t1	MTR_7g101890	42.857	63	33	2	26	86	52	113	3.81e-11	55.5
MS.gene003627.t1	MTR_2g066830	37.879	66	40	1	26	91	58	122	3.99e-11	55.8
MS.gene003627.t1	MTR_7g104950	35.484	62	39	1	29	90	53	113	7.48e-11	54.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003627.t1	AT4G38840	58.586	99	33	2	1	91	1	99	1.54e-35	116
MS.gene003627.t1	AT5G18060	68.421	76	23	1	17	91	15	90	9.40e-35	114
MS.gene003627.t1	AT5G18050	67.105	76	24	1	17	91	15	90	1.15e-34	114
MS.gene003627.t1	AT5G18020	65.789	76	25	1	17	91	15	90	7.68e-34	112
MS.gene003627.t1	AT5G18080	67.105	76	24	1	17	91	15	90	1.85e-33	111
MS.gene003627.t1	AT5G18030	68.056	72	22	1	21	91	17	88	1.20e-32	108
MS.gene003627.t1	AT2G21200	66.667	78	23	2	16	90	9	86	2.83e-32	108
MS.gene003627.t1	AT5G18010	64.474	76	26	1	17	91	15	90	2.97e-32	108
MS.gene003627.t1	AT4G34770	67.105	76	23	1	19	92	28	103	2.06e-31	106
MS.gene003627.t1	AT3G03840	63.158	76	26	1	19	92	20	95	2.57e-31	105
MS.gene003627.t1	AT2G21210	53.061	98	36	3	1	91	1	95	8.75e-31	104
MS.gene003627.t1	AT4G38825	65.278	72	24	1	21	91	18	89	1.03e-30	104
MS.gene003627.t1	AT3G03850	72.059	68	17	1	27	92	26	93	1.88e-30	103
MS.gene003627.t1	AT2G21210	53.061	98	36	3	1	91	68	162	5.89e-30	104
MS.gene003627.t1	AT3G03820	54.255	94	37	2	2	92	6	96	9.92e-30	102
MS.gene003627.t1	AT4G38850	64.286	70	22	1	25	91	20	89	1.75e-29	101
MS.gene003627.t1	AT3G03830	55.682	88	32	2	11	91	5	92	7.66e-29	99.8
MS.gene003627.t1	AT4G34810	65.714	70	19	2	26	90	48	117	4.09e-28	98.6
MS.gene003627.t1	AT4G34800	70.492	61	15	1	26	83	21	81	8.34e-28	97.1
MS.gene003627.t1	AT4G13790	50.000	90	37	2	3	90	8	91	2.13e-26	93.6
MS.gene003627.t1	AT4G34780	52.874	87	31	2	14	90	9	95	2.43e-25	91.3
MS.gene003627.t1	AT4G38860	58.824	68	28	0	24	91	38	105	4.21e-25	90.5
MS.gene003627.t1	AT2G21220	61.538	65	24	1	24	88	38	101	1.01e-24	89.7
MS.gene003627.t1	AT4G34760	61.538	65	24	1	24	88	41	104	1.39e-24	89.4
MS.gene003627.t1	AT1G75580	61.194	67	25	1	24	90	42	107	1.83e-24	89.0
MS.gene003627.t1	AT4G34790	58.462	65	25	1	26	88	39	103	2.75e-23	85.9
MS.gene003627.t1	AT2G16580	45.882	85	45	1	4	88	22	105	1.37e-21	81.6
MS.gene003627.t1	AT1G19830	60.294	68	25	2	24	90	46	112	2.35e-21	81.3
MS.gene003627.t1	AT4G36110	56.250	64	27	1	25	88	39	101	9.04e-21	79.7
MS.gene003627.t1	AT2G18010	54.688	64	28	1	25	88	47	109	1.08e-19	77.0
MS.gene003627.t1	AT3G20220	55.385	65	27	2	26	89	47	110	2.75e-19	76.3
MS.gene003627.t1	AT3G43120	54.839	62	27	1	25	86	78	138	9.95e-19	75.9
MS.gene003627.t1	AT5G20810	56.452	62	26	1	25	86	78	138	6.21e-18	73.9
MS.gene003627.t1	AT5G66260	53.030	66	30	1	26	91	34	98	7.47e-18	72.0
MS.gene003627.t1	AT2G46690	44.706	85	42	3	12	92	9	92	8.33e-18	72.4
MS.gene003627.t1	AT5G20810	56.452	62	26	1	25	86	78	138	1.63e-17	73.6
MS.gene003627.t1	AT1G75590	50.000	74	34	2	11	84	29	99	2.83e-17	72.0
MS.gene003627.t1	AT5G10990	53.333	60	27	1	25	84	40	98	1.07e-16	70.5
MS.gene003627.t1	AT4G34750	46.970	66	34	1	23	88	34	98	1.84e-16	69.7
MS.gene003627.t1	AT4G34750	46.970	66	34	1	23	88	34	98	1.84e-16	69.7
MS.gene003627.t1	AT1G19840	51.429	70	31	2	15	84	32	98	2.44e-16	69.7
MS.gene003627.t1	AT3G61900	45.833	72	35	2	23	91	27	97	2.49e-16	68.9
MS.gene003627.t1	AT3G51200	53.333	60	26	2	25	83	38	96	7.15e-16	67.0
MS.gene003627.t1	AT2G45210	42.466	73	38	2	21	90	74	145	3.05e-15	67.0
MS.gene003627.t1	AT2G24400	50.000	68	33	1	19	86	57	123	5.56e-15	66.6
MS.gene003627.t1	AT4G31320	48.052	77	33	2	10	86	70	139	6.74e-15	66.6
MS.gene003627.t1	AT3G60690	44.928	69	34	2	26	91	88	155	8.63e-15	65.9
MS.gene003627.t1	AT4G00880	50.000	68	31	2	26	91	28	94	1.32e-14	64.3
MS.gene003627.t1	AT2G37030	52.542	59	27	1	25	83	48	105	1.49e-14	64.3
MS.gene003627.t1	AT5G53590	43.056	72	35	2	25	91	45	115	3.33e-14	63.9
MS.gene003627.t1	AT3G09870	50.000	64	29	2	25	86	44	106	5.70e-13	60.1
MS.gene003627.t1	AT4G09530	45.070	71	33	3	17	84	22	89	6.54e-13	59.7
MS.gene003627.t1	AT4G12410	44.118	68	34	2	26	90	76	142	6.88e-13	60.8
MS.gene003627.t1	AT3G53250	49.153	59	26	1	25	83	51	105	7.43e-13	60.1
MS.gene003627.t1	AT3G53250	49.153	59	26	1	25	83	82	136	1.14e-12	60.1
MS.gene003627.t1	AT1G56150	43.939	66	36	1	26	91	38	102	2.70e-12	58.2
MS.gene003627.t1	AT3G12830	39.189	74	44	1	18	91	42	114	2.84e-12	58.5
MS.gene003627.t1	AT4G22620	40.278	72	39	2	22	90	75	145	3.74e-12	58.9
MS.gene003627.t1	AT1G16510	42.466	73	39	2	22	92	50	121	6.72e-12	57.8
MS.gene003627.t1	AT3G03847	37.805	82	48	3	3	83	48	127	1.47e-11	56.6
MS.gene003627.t1	AT1G76190	49.153	59	28	2	28	86	23	79	2.48e-11	55.8
MS.gene003627.t1	AT2G36210	38.356	73	45	0	16	88	44	116	4.04e-11	55.8
MS.gene003627.t1	AT1G79130	41.538	65	37	1	26	90	48	111	4.80e-11	55.5

Find 23 sgRNAs with CRISPR-Local

Find 24 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGTCAAGCCGAGGAAGAGTT+TGG	0.367159	4.1:-31072180	MS.gene003627:CDS
CACATAACATCTCGCTTGAA+CGG	0.512733	4.1:-31072102	MS.gene003627:CDS
CCGAGCAATTTCAAAAGTTG+TGG	0.513570	4.1:-31072304	MS.gene003627:CDS
AAAAGTTGTGGACGTGCCAA+AGG	0.522509	4.1:-31072292	MS.gene003627:CDS
GGATATCTTGCAGTGTATGT+TGG	0.530355	4.1:-31072270	MS.gene003627:CDS
ATCATATCCAAACTCTTCCT+CGG	0.532636	4.1:+31072173	None:intergenic
TACACTGCAAGATATCCCTT+TGG	0.539372	4.1:+31072276	None:intergenic
TTTGGATATGATCATCCAAT+GGG	0.545525	4.1:-31072162	MS.gene003627:CDS
GGAATGGTGAGGCCACCCAT+TGG	0.562484	4.1:+31072147	None:intergenic
AAAGTTGTGGACGTGCCAAA+GGG	0.566864	4.1:-31072291	MS.gene003627:CDS
GTTTGGATATGATCATCCAA+TGG	0.573812	4.1:-31072163	MS.gene003627:CDS
CTCAACAAGTCTTGAAACGA+TGG	0.576425	4.1:+31072201	None:intergenic
GACATCTTCAGTGCAAGGAA+TGG	0.591180	4.1:+31072131	None:intergenic
ACAAGTCTTGAAACGATGGT+TGG	0.594658	4.1:+31072205	None:intergenic
TGAAAGACATCTTCAGTGCA+AGG	0.599859	4.1:+31072126	None:intergenic
GATGACTTTCTGATAATACC+AGG	0.603432	4.1:+31072339	None:intergenic
GGTTGGTTCAAGTATGACAT+GGG	0.614423	4.1:+31072222	None:intergenic
TGGTTGGTTCAAGTATGACA+TGG	0.614905	4.1:+31072221	None:intergenic
AGACTTGTTGAGTCAAGCCG+AGG	0.633253	4.1:-31072190	MS.gene003627:CDS
GGATATGATCATCCAATGGG+TGG	0.648071	4.1:-31072159	MS.gene003627:CDS
CTTCAGTGCAAGGAATGGTG+AGG	0.671810	4.1:+31072136	None:intergenic
ATGACTTTCTGATAATACCA+GGG	0.703787	4.1:+31072340	None:intergenic
GTTGGTTCAAGTATGACATG+GGG	0.711766	4.1:+31072223	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	ATGACTTTCTGATAATACCA+GGG	+	chr4.1:31072112-31072131	None:intergenic	30.0%
	TTTGGATATGATCATCCAAT+GGG	-	chr4.1:31072287-31072306	MS.gene003627:CDS	30.0%
	ATCATATCCAAACTCTTCCT+CGG	+	chr4.1:31072279-31072298	None:intergenic	35.0%
	GATGACTTTCTGATAATACC+AGG	+	chr4.1:31072113-31072132	None:intergenic	35.0%
	GTTTGGATATGATCATCCAA+TGG	-	chr4.1:31072286-31072305	MS.gene003627:CDS	35.0%
!!!	CCACAACTTTTGAAATTGCT+CGG	+	chr4.1:31072148-31072167	None:intergenic	35.0%
	ACAAGTCTTGAAACGATGGT+TGG	+	chr4.1:31072247-31072266	None:intergenic	40.0%
	CACATAACATCTCGCTTGAA+CGG	-	chr4.1:31072347-31072366	MS.gene003627:CDS	40.0%
	CCGAGCAATTTCAAAAGTTG+TGG	-	chr4.1:31072145-31072164	MS.gene003627:CDS	40.0%
	CTCAACAAGTCTTGAAACGA+TGG	+	chr4.1:31072251-31072270	None:intergenic	40.0%
	GGATATCTTGCAGTGTATGT+TGG	-	chr4.1:31072179-31072198	MS.gene003627:CDS	40.0%
	TACACTGCAAGATATCCCTT+TGG	+	chr4.1:31072176-31072195	None:intergenic	40.0%
	TGAAAGACATCTTCAGTGCA+AGG	+	chr4.1:31072326-31072345	None:intergenic	40.0%
!	GGTTGGTTCAAGTATGACAT+GGG	+	chr4.1:31072230-31072249	None:intergenic	40.0%
!	GTTGGTTCAAGTATGACATG+GGG	+	chr4.1:31072229-31072248	None:intergenic	40.0%
!	TGGTTGGTTCAAGTATGACA+TGG	+	chr4.1:31072231-31072250	None:intergenic	40.0%
	AAAAGTTGTGGACGTGCCAA+AGG	-	chr4.1:31072157-31072176	MS.gene003627:CDS	45.0%
	AAAGTTGTGGACGTGCCAAA+GGG	-	chr4.1:31072158-31072177	MS.gene003627:CDS	45.0%
	GACATCTTCAGTGCAAGGAA+TGG	+	chr4.1:31072321-31072340	None:intergenic	45.0%
	GGATATGATCATCCAATGGG+TGG	-	chr4.1:31072290-31072309	MS.gene003627:CDS	45.0%
	AGTCAAGCCGAGGAAGAGTT+TGG	-	chr4.1:31072269-31072288	MS.gene003627:CDS	50.0%
	CTTCAGTGCAAGGAATGGTG+AGG	+	chr4.1:31072316-31072335	None:intergenic	50.0%
!!	AGACTTGTTGAGTCAAGCCG+AGG	-	chr4.1:31072259-31072278	MS.gene003627:CDS	50.0%
	GGAATGGTGAGGCCACCCAT+TGG	+	chr4.1:31072305-31072324	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	31072095	31072376	31072095	ID=MS.gene003627
chr4.1	mRNA	31072095	31072376	31072095	ID=MS.gene003627.t1;Parent=MS.gene003627
chr4.1	exon	31072095	31072376	31072095	ID=MS.gene003627.t1.exon1;Parent=MS.gene003627.t1
chr4.1	CDS	31072095	31072376	31072095	ID=cds.MS.gene003627.t1;Parent=MS.gene003627.t1

Gene Sequence	>MS.gene003627 ATGGGTTTTCGTGTCCCTGGTATTATCAGAAAGTCATCATTTTCTGCAAGCCGAGCAATTTCAAAAGTTGTGGACGTGCCAAAGGGATATCTTGCAGTGTATGTTGGAGAGAAACAAAAGCGATTTGTGATCCCCATGTCATACTTGAACCAACCATCGTTTCAAGACTTGTTGAGTCAAGCCGAGGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTCACCATTCCTTGCACTGAAGATGTCTTTCAACACATAACATCTCGCTTGAACGGAATATGA
Protein sequence	>MS.gene003627.t1 MGFRVPGIIRKSSFSASRAISKVVDVPKGYLAVYVGEKQKRFVIPMSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCTEDVFQHITSRLNGI