AlfalfaGEDB | MS.gene003602

M. sativa cultivar XinJiangDaYe / MS.gene003602

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003602.t1	XP_003607131.1	90.8	87	8	0	1	87	1	87	2.30E-37	164.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003602.t1	P33080	73.6	91	17	2	1	85	1	90	4.6e-31	134.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003602.t1	G7JL53	90.8	87	8	0	1	87	1	87	1.6e-37	164.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene003602	MS.gene50669	PPI
MS.gene003602	MS.gene70685	PPI
MS.gene003602	MS.gene057807	PPI
MS.gene003602	MS.gene062941	PPI
MS.gene003602	MS.gene50662	PPI
MS.gene003602	MS.gene50660	PPI
MS.gene003602	MS.gene003623	PPI
MS.gene062946	MS.gene003602	PPI
MS.gene003602	MS.gene057799	PPI
MS.gene003602	MS.gene003628	PPI
MS.gene003602	MS.gene003582	PPI
MS.gene003605	MS.gene003602	PPI
MS.gene003602	MS.gene057794	PPI
MS.gene003602	MS.gene50688	PPI
MS.gene003602	MS.gene003629	PPI
MS.gene003602	MS.gene003603	PPI
MS.gene003602	MS.gene062966	PPI
MS.gene003602	MS.gene062980	PPI
MS.gene23373	MS.gene003602	PPI
MS.gene003602	MS.gene50689	PPI
MS.gene003602	MS.gene23367	PPI
MS.gene003602	MS.gene50683	PPI
MS.gene003602	MS.gene003610	PPI
MS.gene003602	MS.gene057809	PPI
MS.gene003602	MS.gene50772	PPI
MS.gene062975	MS.gene003602	PPI
MS.gene003602	MS.gene057802	PPI
MS.gene003602	MS.gene057796	PPI
MS.gene003602	MS.gene50682	PPI
MS.gene003602	MS.gene057805	PPI
MS.gene003602	MS.gene057800	PPI
MS.gene003602	MS.gene50653	PPI
MS.gene003602	MS.gene003597	PPI
MS.gene003602	MS.gene003598	PPI
MS.gene003602	MS.gene50690	PPI
MS.gene003602	MS.gene057780	PPI
MS.gene003602	MS.gene057788	PPI
MS.gene003602	MS.gene50685	PPI
MS.gene003602	MS.gene003613	PPI
MS.gene003602	MS.gene003584	PPI
MS.gene003602	MS.gene057791	PPI
MS.gene062970	MS.gene003602	PPI
MS.gene003602	MS.gene50674	PPI
MS.gene062942	MS.gene003602	PPI
MS.gene003602	MS.gene003630	PPI
MS.gene003602	MS.gene003576	PPI
MS.gene003602	MS.gene057782	PPI
MS.gene003602	MS.gene057779	PPI
MS.gene003602	MS.gene50673	PPI
MS.gene062972	MS.gene003602	PPI
MS.gene003602	MS.gene062965	PPI
MS.gene003602	MS.gene50771	PPI
MS.gene003602	MS.gene022358	PPI
MS.gene003602	MS.gene062954	PPI
MS.gene003602	MS.gene23369	PPI
MS.gene003602	MS.gene062986	PPI
MS.gene003602	MS.gene057783	PPI
MS.gene003602	MS.gene50770	PPI
MS.gene003602	MS.gene062987	PPI
MS.gene003602	MS.gene057811	PPI
MS.gene003602	MS.gene057806	PPI
MS.gene003602	MS.gene062964	PPI
MS.gene003602	MS.gene77525	PPI
MS.gene003602	MS.gene062944	PPI
MS.gene003602	MS.gene50658	PPI
MS.gene003602	MS.gene057777	PPI
MS.gene003602	MS.gene003626	PPI
MS.gene003602	MS.gene50655	PPI
MS.gene003602	MS.gene28863	PPI
MS.gene003602	MS.gene062945	PPI
MS.gene062978	MS.gene003602	PPI
MS.gene003602	MS.gene057804	PPI
MS.gene003602	MS.gene003580	PPI
MS.gene003602	MS.gene062971	PPI
MS.gene003602	MS.gene50651	PPI
MS.gene003602	MS.gene50656	PPI
MS.gene003602	MS.gene062969	PPI
MS.gene003593	MS.gene003602	PPI
MS.gene003602	MS.gene70683	PPI
MS.gene003602	MS.gene062962	PPI
MS.gene003602	MS.gene50666	PPI
MS.gene003602	MS.gene062985	PPI
MS.gene003602	MS.gene057784	PPI
MS.gene003602	MS.gene062953	PPI
MS.gene003602	MS.gene003622	PPI
MS.gene003602	MS.gene003599	PPI
MS.gene003602	MS.gene23368	PPI
MS.gene003602	MS.gene003585	PPI
MS.gene003602	MS.gene057817	PPI
MS.gene003602	MS.gene50773	PPI
MS.gene057816	MS.gene003602	PPI
MS.gene003602	MS.gene50668	PPI
MS.gene003602	MS.gene003581	PPI
MS.gene003602	MS.gene70684	PPI
MS.gene003602	MS.gene062958	PPI
MS.gene003602	MS.gene057798	PPI
MS.gene003602	MS.gene003612	PPI
MS.gene003602	MS.gene062983	PPI
MS.gene003602	MS.gene062967	PPI
MS.gene003602	MS.gene003579	PPI
MS.gene003602	MS.gene062940	PPI
MS.gene003602	MS.gene062989	PPI
MS.gene003602	MS.gene003595	PPI
MS.gene003602	MS.gene50657	PPI
MS.gene003602	MS.gene062959	PPI
MS.gene003602	MS.gene003607	PPI
MS.gene003602	MS.gene003606	PPI
MS.gene003602	MS.gene50686	PPI
MS.gene003602	MS.gene50664	PPI
MS.gene003602	MS.gene057785	PPI
MS.gene003602	MS.gene50670	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003602.t1	MTR_4g072580	90.805	87	8	0	1	87	1	87	5.69e-55	165
MS.gene003602.t1	MTR_4g072600	88.506	87	10	0	1	87	1	87	6.82e-53	159
MS.gene003602.t1	MTR_4g072490	82.353	85	15	0	1	85	1	85	1.11e-49	151
MS.gene003602.t1	MTR_4g072740	83.529	85	14	0	1	85	1	85	2.45e-49	150
MS.gene003602.t1	MTR_4g072830	83.146	89	12	1	1	86	1	89	7.49e-48	147
MS.gene003602.t1	MTR_4g072370	81.111	90	14	1	1	87	1	90	1.06e-47	147
MS.gene003602.t1	MTR_4g072470	82.353	85	15	0	1	85	1	85	1.39e-47	146
MS.gene003602.t1	MTR_4g072630	81.395	86	15	1	1	85	1	86	5.65e-47	144
MS.gene003602.t1	MTR_4g072330	76.667	90	18	1	1	87	1	90	1.27e-46	144
MS.gene003602.t1	MTR_4g072610	78.161	87	18	1	1	87	1	86	3.54e-45	140
MS.gene003602.t1	MTR_4g072465	76.744	86	19	1	1	85	1	86	3.29e-44	137
MS.gene003602.t1	MTR_4g072540	82.558	86	14	1	1	85	1	86	1.67e-43	136
MS.gene003602.t1	MTR_4g072650	75.862	87	20	1	1	87	1	86	2.73e-43	135
MS.gene003602.t1	MTR_4g072670	83.721	86	13	1	1	85	1	86	4.73e-43	135
MS.gene003602.t1	MTR_3g084150	71.111	90	21	1	1	85	1	90	1.32e-42	134
MS.gene003602.t1	MTR_3g110038	72.222	90	20	1	1	85	1	90	1.53e-42	134
MS.gene003602.t1	MTR_3g084170	72.222	90	20	1	1	85	1	90	2.20e-42	133
MS.gene003602.t1	MTR_8g461410	70.000	90	22	1	1	85	1	90	3.27e-42	133
MS.gene003602.t1	MTR_4g072310	72.527	91	19	1	1	85	1	91	6.65e-42	132
MS.gene003602.t1	MTR_3g084180	70.000	90	22	1	1	85	1	90	7.86e-42	132
MS.gene003602.t1	MTR_4g072820	75.000	84	21	0	1	84	1	84	7.94e-42	132
MS.gene003602.t1	MTR_3g084240	71.111	90	21	1	1	85	1	90	1.89e-41	131
MS.gene003602.t1	MTR_4g072690	81.176	85	16	0	1	85	1	85	2.88e-41	130
MS.gene003602.t1	MTR_4g072880	69.231	91	22	1	1	85	1	91	6.10e-41	129
MS.gene003602.t1	MTR_4g072510	80.233	86	16	1	1	85	1	86	6.18e-41	129
MS.gene003602.t1	MTR_4g072250	74.725	91	16	2	1	85	1	90	8.50e-41	129
MS.gene003602.t1	MTR_4g072380	75.904	83	19	1	1	82	1	83	1.08e-40	129
MS.gene003602.t1	MTR_4g072870	67.033	91	24	1	1	85	1	91	3.08e-40	128
MS.gene003602.t1	MTR_5g008350	81.081	74	14	0	1	74	1	74	3.32e-40	127
MS.gene003602.t1	MTR_4g072720	77.907	86	18	1	1	85	1	86	3.90e-40	127
MS.gene003602.t1	MTR_3g084220	68.889	90	23	1	1	85	1	90	5.49e-40	127
MS.gene003602.t1	MTR_4g072240	67.033	91	24	1	1	85	1	91	6.56e-40	127
MS.gene003602.t1	MTR_4g072220	68.132	91	23	1	1	85	1	91	7.44e-40	127
MS.gene003602.t1	MTR_3g110032	68.132	91	23	1	1	85	1	91	1.30e-39	126
MS.gene003602.t1	MTR_4g072660	70.732	82	24	0	1	82	1	82	2.25e-39	125
MS.gene003602.t1	MTR_4g072450	78.824	85	18	0	1	85	1	85	2.27e-39	125
MS.gene003602.t1	MTR_4g072260	67.033	91	24	1	1	85	1	91	4.64e-39	125
MS.gene003602.t1	MTR_4g050700	68.132	91	23	1	1	85	1	91	4.80e-39	125
MS.gene003602.t1	MTR_2g012410	68.132	91	23	1	1	85	1	91	4.80e-39	125
MS.gene003602.t1	MTR_3g084250	67.778	90	24	1	1	85	1	90	7.98e-39	124
MS.gene003602.t1	MTR_3g110042	70.787	89	21	1	1	84	1	89	8.25e-39	124
MS.gene003602.t1	MTR_4g072590	77.647	85	19	0	1	85	1	85	8.74e-39	124
MS.gene003602.t1	MTR_4g072890	65.934	91	25	1	1	85	1	91	1.65e-38	123
MS.gene003602.t1	MTR_4g072480	66.667	90	25	1	1	85	1	90	2.00e-38	123
MS.gene003602.t1	MTR_4g072230	71.910	89	17	2	1	83	1	87	2.10e-38	123
MS.gene003602.t1	MTR_4g072300	64.835	91	26	1	1	85	1	91	3.19e-38	122
MS.gene003602.t1	MTR_4g072270	69.318	88	21	1	1	82	1	88	3.65e-38	122
MS.gene003602.t1	MTR_4g072850	69.892	93	21	1	1	86	1	93	4.73e-38	122
MS.gene003602.t1	MTR_4g072860	70.330	91	21	1	1	85	1	91	5.42e-38	122
MS.gene003602.t1	MTR_3g117630	73.494	83	16	1	9	85	8	90	6.20e-38	122
MS.gene003602.t1	MTR_4g072570	67.778	90	24	1	1	85	1	90	8.07e-38	122
MS.gene003602.t1	MTR_3g084260	67.033	91	24	1	1	85	1	91	1.01e-37	121
MS.gene003602.t1	MTR_4g072730	65.556	90	26	1	1	85	1	90	1.65e-37	121
MS.gene003602.t1	MTR_4g072620	64.444	90	27	1	1	85	1	90	2.58e-37	120
MS.gene003602.t1	MTR_4g072680	64.444	90	27	1	1	85	1	90	7.08e-37	119
MS.gene003602.t1	MTR_3g084190	64.835	91	27	1	1	86	1	91	1.92e-36	118
MS.gene003602.t1	MTR_8g461420	65.934	91	26	1	1	86	1	91	2.17e-36	118
MS.gene003602.t1	MTR_4g072640	66.304	92	24	2	1	86	1	91	4.18e-36	117
MS.gene003602.t1	MTR_4g072500	65.934	91	24	2	1	85	1	90	7.24e-36	117
MS.gene003602.t1	MTR_3g084230	64.835	91	27	1	1	86	1	91	7.82e-36	117
MS.gene003602.t1	MTR_4g072460	62.222	90	29	1	1	85	1	90	1.74e-35	116
MS.gene003602.t1	MTR_3g084210	64.444	90	27	1	1	85	1	90	4.62e-35	115
MS.gene003602.t1	MTR_4g072940	68.132	91	22	1	3	86	33	123	9.35e-35	115
MS.gene003602.t1	MTR_3g110045	66.292	89	25	1	3	86	62	150	1.00e-34	115
MS.gene003602.t1	MTR_4g072530	63.736	91	26	2	1	85	1	90	1.23e-34	114
MS.gene003602.t1	MTR_3g084160	62.637	91	29	1	1	86	1	91	5.56e-34	112
MS.gene003602.t1	MTR_5g008360	66.667	78	26	0	8	85	4	81	6.24e-34	112
MS.gene003602.t1	MTR_4g072980	56.522	92	32	2	1	84	1	92	3.39e-32	107
MS.gene003602.t1	MTR_3g117640	68.116	69	21	1	20	87	34	102	1.07e-31	107
MS.gene003602.t1	MTR_4g072770	64.286	84	25	1	1	84	1	79	1.62e-31	105
MS.gene003602.t1	MTR_5g008370	78.788	66	14	0	20	85	25	90	2.10e-31	107
MS.gene003602.t1	MTR_4g072550	61.446	83	28	1	7	85	19	101	2.99e-30	103
MS.gene003602.t1	MTR_3g084200	68.056	72	18	1	1	67	1	72	3.95e-30	102
MS.gene003602.t1	MTR_4g072560	54.082	98	32	3	1	85	1	98	4.00e-30	102
MS.gene003602.t1	MTR_4g072910	63.889	72	26	0	14	85	29	100	5.42e-29	100
MS.gene003602.t1	MTR_4g072290	55.294	85	30	1	1	85	1	77	3.59e-26	92.0
MS.gene003602.t1	MTR_3g110035	64.062	64	23	0	22	85	73	136	1.12e-25	92.8
MS.gene003602.t1	MTR_6g077850	58.209	67	28	0	20	86	34	100	3.87e-24	87.8
MS.gene003602.t1	MTR_4g072280	58.667	75	25	1	1	69	1	75	4.01e-24	87.0
MS.gene003602.t1	MTR_4g072750	60.811	74	22	2	1	67	1	74	6.78e-23	84.0
MS.gene003602.t1	MTR_3g113310	56.923	65	27	1	20	84	42	105	1.75e-22	83.6
MS.gene003602.t1	MTR_3g117610	58.209	67	27	1	20	86	45	110	5.53e-22	82.4
MS.gene003602.t1	MTR_4g072930	48.750	80	37	1	10	85	31	110	4.71e-21	80.1
MS.gene003602.t1	MTR_4g072190	48.810	84	38	2	5	84	17	99	5.80e-21	79.7
MS.gene003602.t1	MTR_4g072840	50.000	84	17	2	1	84	1	59	1.73e-19	74.7
MS.gene003602.t1	MTR_8g461400	46.667	90	17	2	1	85	1	64	3.38e-18	71.6
MS.gene003602.t1	MTR_5g021820	52.308	65	30	1	20	84	40	103	3.60e-18	72.8
MS.gene003602.t1	MTR_8g076040	53.968	63	28	1	20	82	41	102	2.13e-17	70.9
MS.gene003602.t1	MTR_1g009150	53.623	69	31	1	12	80	63	130	1.01e-16	70.9
MS.gene003602.t1	MTR_1g094750	54.098	61	27	1	20	80	50	109	1.48e-16	68.9
MS.gene003602.t1	MTR_2g043960	55.172	58	25	1	20	77	76	132	3.81e-16	68.9
MS.gene003602.t1	MTR_7g118010	40.476	84	47	2	5	86	8	90	9.95e-16	66.6
MS.gene003602.t1	MTR_4g124750	53.448	58	26	1	20	77	69	125	3.51e-15	66.2
MS.gene003602.t1	MTR_7g101740	56.250	64	25	2	20	82	40	101	4.71e-15	65.1
MS.gene003602.t1	MTR_1g063950	53.226	62	26	2	20	80	48	107	4.83e-15	65.1
MS.gene003602.t1	MTR_4g005310	46.970	66	34	1	16	80	58	123	6.55e-15	65.5
MS.gene003602.t1	MTR_4g025830	43.478	69	35	2	20	85	79	146	1.06e-14	65.1
MS.gene003602.t1	MTR_1g061570	52.459	61	28	1	20	80	19	78	1.38e-14	63.9
MS.gene003602.t1	MTR_8g461210	47.761	67	34	1	20	86	35	100	9.93e-14	61.6
MS.gene003602.t1	MTR_4g005320	49.180	61	30	1	20	80	70	129	1.02e-13	62.8
MS.gene003602.t1	MTR_8g026730	42.029	69	37	2	20	86	27	94	1.22e-13	61.2
MS.gene003602.t1	MTR_4g072160	44.872	78	40	2	10	86	27	102	1.41e-13	62.0
MS.gene003602.t1	MTR_0388s0020	39.744	78	43	2	11	85	66	142	2.45e-13	61.6
MS.gene003602.t1	MTR_3g105900	68.293	41	13	0	20	60	1172	1212	2.54e-13	63.9
MS.gene003602.t1	MTR_1g024085	47.761	67	34	1	20	86	37	102	2.57e-13	61.2
MS.gene003602.t1	MTR_3g109160	52.459	61	28	1	20	80	69	128	4.83e-13	61.2
MS.gene003602.t1	MTR_4g021810	50.746	67	31	2	12	77	18	83	6.09e-13	59.3
MS.gene003602.t1	MTR_3g092220	40.260	77	43	2	3	77	16	91	6.16e-13	59.7
MS.gene003602.t1	MTR_7g405740	39.474	76	45	1	5	80	52	126	1.24e-12	59.7
MS.gene003602.t1	MTR_5g008380	81.250	32	6	0	54	85	246	277	5.90e-12	59.7
MS.gene003602.t1	MTR_3g097120	40.244	82	40	2	13	86	2	82	1.40e-11	55.8
MS.gene003602.t1	MTR_8g101520	42.424	66	37	1	21	86	51	115	2.23e-11	56.6
MS.gene003602.t1	MTR_2g066830	38.158	76	45	2	2	77	41	114	3.53e-11	55.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003602.t1	AT4G38840	71.642	67	18	1	20	85	33	99	3.45e-32	108
MS.gene003602.t1	AT5G18020	59.494	79	31	1	9	86	13	91	4.64e-31	105
MS.gene003602.t1	AT5G18050	59.740	77	30	1	9	84	13	89	5.03e-31	104
MS.gene003602.t1	AT2G21210	60.526	76	28	1	12	85	20	95	1.27e-30	103
MS.gene003602.t1	AT5G18060	61.039	77	29	1	9	84	13	89	1.42e-30	103
MS.gene003602.t1	AT5G18080	66.667	66	21	1	20	84	24	89	4.55e-30	102
MS.gene003602.t1	AT2G21200	60.526	76	29	1	10	84	11	86	6.30e-30	102
MS.gene003602.t1	AT2G21210	60.526	76	28	1	12	85	87	162	7.83e-30	103
MS.gene003602.t1	AT5G18030	58.025	81	33	1	5	84	7	87	8.48e-30	101
MS.gene003602.t1	AT4G34800	58.333	84	31	2	1	80	1	84	4.27e-29	100
MS.gene003602.t1	AT4G34810	63.291	79	24	2	11	84	39	117	9.70e-29	100
MS.gene003602.t1	AT4G38825	60.563	71	27	1	15	84	18	88	1.25e-28	98.6
MS.gene003602.t1	AT4G38850	57.500	80	27	2	8	84	13	88	2.47e-28	98.2
MS.gene003602.t1	AT3G03840	54.651	86	31	2	1	84	14	93	2.89e-28	98.2
MS.gene003602.t1	AT5G18010	57.143	77	32	1	9	84	13	89	3.30e-28	97.8
MS.gene003602.t1	AT4G34770	64.000	75	25	1	13	85	28	102	7.58e-28	97.4
MS.gene003602.t1	AT3G03850	58.537	82	28	2	5	84	14	91	4.17e-27	95.1
MS.gene003602.t1	AT4G13790	47.619	84	42	1	3	84	8	91	1.48e-26	93.6
MS.gene003602.t1	AT3G03820	51.724	87	33	2	1	84	14	94	3.15e-26	92.8
MS.gene003602.t1	AT4G34780	61.644	73	25	1	17	86	25	97	1.34e-25	91.7
MS.gene003602.t1	AT3G03830	53.012	83	31	2	5	84	14	91	4.24e-24	87.4
MS.gene003602.t1	AT4G34790	61.538	65	23	1	20	82	39	103	9.31e-24	87.0
MS.gene003602.t1	AT4G38860	58.730	63	26	0	20	82	40	102	5.94e-22	82.4
MS.gene003602.t1	AT1G75580	60.000	65	25	1	20	84	44	107	6.23e-21	79.7
MS.gene003602.t1	AT2G21220	53.731	67	30	1	18	84	38	103	6.19e-20	77.0
MS.gene003602.t1	AT4G34760	55.385	65	28	1	20	84	43	106	9.91e-20	76.6
MS.gene003602.t1	AT3G20220	50.725	69	32	2	20	87	47	114	1.63e-17	71.2
MS.gene003602.t1	AT1G19830	57.576	66	26	2	20	84	48	112	2.56e-17	70.9
MS.gene003602.t1	AT2G16580	53.968	63	28	1	20	82	44	105	2.75e-17	70.5
MS.gene003602.t1	AT4G36110	52.381	63	29	1	20	82	40	101	7.55e-17	69.3
MS.gene003602.t1	AT3G43120	53.448	58	26	1	20	77	79	135	2.36e-16	69.3
MS.gene003602.t1	AT5G66260	48.052	77	37	2	11	85	23	98	9.08e-16	66.6
MS.gene003602.t1	AT2G18010	50.794	63	30	1	20	82	48	109	1.33e-15	66.2
MS.gene003602.t1	AT5G20810	55.172	58	25	1	20	77	79	135	1.96e-15	67.4
MS.gene003602.t1	AT5G20810	55.172	58	25	1	20	77	79	135	3.92e-15	67.0
MS.gene003602.t1	AT3G51200	41.558	77	42	2	4	80	26	99	7.56e-15	64.3
MS.gene003602.t1	AT2G37030	51.613	62	29	1	20	81	49	109	7.81e-15	64.7
MS.gene003602.t1	AT4G34750	40.506	79	46	1	9	87	26	103	1.23e-14	64.7
MS.gene003602.t1	AT4G34750	40.506	79	46	1	9	87	26	103	1.23e-14	64.7
MS.gene003602.t1	AT1G75590	51.724	58	27	1	20	77	42	98	3.43e-14	63.9
MS.gene003602.t1	AT3G61900	38.095	84	48	2	6	86	16	98	8.90e-14	62.4
MS.gene003602.t1	AT5G10990	50.000	58	28	1	20	77	41	97	1.04e-13	62.4
MS.gene003602.t1	AT4G22620	38.554	83	47	2	6	85	65	146	1.29e-13	62.4
MS.gene003602.t1	AT3G53250	46.774	62	29	1	20	81	52	109	1.56e-13	61.2
MS.gene003602.t1	AT3G53250	46.774	62	29	1	20	81	83	140	2.09e-13	61.6
MS.gene003602.t1	AT1G19840	48.571	70	33	2	10	77	29	97	2.12e-13	61.6
MS.gene003602.t1	AT2G24400	49.296	71	35	1	10	80	54	123	2.19e-13	62.0
MS.gene003602.t1	AT4G31320	46.479	71	37	1	10	80	70	139	4.24e-13	61.6
MS.gene003602.t1	AT4G12410	43.478	69	35	2	20	85	76	143	7.57e-13	60.5
MS.gene003602.t1	AT2G46690	41.667	72	38	2	9	77	13	83	9.56e-13	59.3
MS.gene003602.t1	AT2G45210	40.580	69	37	2	20	85	79	146	1.74e-12	59.7
MS.gene003602.t1	AT3G60690	42.647	68	35	2	20	84	88	154	2.60e-12	59.3
MS.gene003602.t1	AT4G00880	46.377	69	34	2	20	86	28	95	4.42e-12	57.8
MS.gene003602.t1	AT3G12830	38.158	76	46	1	9	84	39	113	1.44e-11	56.6
MS.gene003602.t1	AT1G56150	42.424	66	37	1	19	84	37	101	3.75e-11	55.1
MS.gene003602.t1	AT5G03310	45.455	66	31	2	20	80	39	104	6.93e-11	54.3
MS.gene003602.t1	AT2G36210	38.235	68	42	0	20	87	54	121	8.15e-11	54.7

Find 19 sgRNAs with CRISPR-Local

Find 18 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTTGGTTCAAGTATGATAT+TGG	0.247037	4.1:+30930620	None:intergenic
GTTGGTTCAAGTATGATATT+GGG	0.382183	4.1:+30930621	None:intergenic
ATCATATTCGAATTGTTCCT+CGG	0.498996	4.1:+30930571	None:intergenic
AAAAGTTGTGTACGTGCCAA+AGG	0.518623	4.1:-30930690	MS.gene003602:CDS
CTCGTTTGAGTAGGTGCTAA+CGG	0.521428	4.1:-30930490	None:intergenic
ATATCACTTCTCGTTTGAGT+AGG	0.532328	4.1:-30930499	MS.gene003602:CDS
GGATATCTTGCAGTATATGT+AGG	0.533794	4.1:-30930668	MS.gene003602:CDS
TATACTGCAAGATATCCCTT+TGG	0.554191	4.1:+30930674	None:intergenic
AAAGTTGTGTACGTGCCAAA+GGG	0.557476	4.1:-30930689	MS.gene003602:CDS
ACAAGTCTTGAAACGATGGT+TGG	0.568123	4.1:+30930603	None:intergenic
TTCAACAAGTCTTGAAACGA+TGG	0.572715	4.1:+30930599	None:intergenic
TTCGAATATGATCATCCAGC+GGG	0.576347	4.1:-30930560	MS.gene003602:CDS
AAGAAAACATCTTCTCTACA+AGG	0.601482	4.1:+30930524	None:intergenic
GGAATAGTGAGACCACCCGC+TGG	0.621275	4.1:+30930545	None:intergenic
GATGTCTTTCTGATGATACC+AGG	0.624908	4.1:+30930719	None:intergenic
TCTTGCAGTATATGTAGGAG+AGG	0.631317	4.1:-30930663	MS.gene003602:CDS
AGACTTGTTGAATCAAGCCG+AGG	0.652687	4.1:-30930588	MS.gene003602:CDS
GAATATGATCATCCAGCGGG+TGG	0.676285	4.1:-30930557	MS.gene003602:CDS
ATTCGAATATGATCATCCAG+CGG	0.709307	4.1:-30930561	MS.gene003602:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AAGAAAACATCTTCTCTACA+AGG	+	chr4.1:30930706-30930725	None:intergenic	30.0%
	ATCATATTCGAATTGTTCCT+CGG	+	chr4.1:30930659-30930678	None:intergenic	30.0%
!	GTTGGTTCAAGTATGATATT+GGG	+	chr4.1:30930609-30930628	None:intergenic	30.0%
	ATATCACTTCTCGTTTGAGT+AGG	-	chr4.1:30930728-30930747	MS.gene003602:CDS	35.0%
	ATTCGAATATGATCATCCAG+CGG	-	chr4.1:30930666-30930685	MS.gene003602:CDS	35.0%
	GGATATCTTGCAGTATATGT+AGG	-	chr4.1:30930559-30930578	MS.gene003602:CDS	35.0%
	TATACTGCAAGATATCCCTT+TGG	+	chr4.1:30930556-30930575	None:intergenic	35.0%
	TTCAACAAGTCTTGAAACGA+TGG	+	chr4.1:30930631-30930650	None:intergenic	35.0%
!	GGTTGGTTCAAGTATGATAT+TGG	+	chr4.1:30930610-30930629	None:intergenic	35.0%
	AAAAGTTGTGTACGTGCCAA+AGG	-	chr4.1:30930537-30930556	MS.gene003602:CDS	40.0%
	AAAGTTGTGTACGTGCCAAA+GGG	-	chr4.1:30930538-30930557	MS.gene003602:CDS	40.0%
	ACAAGTCTTGAAACGATGGT+TGG	+	chr4.1:30930627-30930646	None:intergenic	40.0%
	GATGTCTTTCTGATGATACC+AGG	+	chr4.1:30930511-30930530	None:intergenic	40.0%
	TCTTGCAGTATATGTAGGAG+AGG	-	chr4.1:30930564-30930583	MS.gene003602:CDS	40.0%
	TTCGAATATGATCATCCAGC+GGG	-	chr4.1:30930667-30930686	MS.gene003602:CDS	40.0%
!!	AGACTTGTTGAATCAAGCCG+AGG	-	chr4.1:30930639-30930658	MS.gene003602:CDS	45.0%
	GAATATGATCATCCAGCGGG+TGG	-	chr4.1:30930670-30930689	MS.gene003602:CDS	50.0%
	GGAATAGTGAGACCACCCGC+TGG	+	chr4.1:30930685-30930704	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	30930493	30930756	30930493	ID=MS.gene003602
chr4.1	mRNA	30930493	30930756	30930493	ID=MS.gene003602.t1;Parent=MS.gene003602
chr4.1	exon	30930493	30930756	30930493	ID=MS.gene003602.t1.exon1;Parent=MS.gene003602.t1
chr4.1	CDS	30930493	30930756	30930493	ID=cds.MS.gene003602.t1;Parent=MS.gene003602.t1

Gene Sequence	>MS.gene003602 ATGGGTTTTCGTTTACCTGGTATCATCAGAAAGACATCATCTTCAAAAGTTGTGTACGTGCCAAAGGGATATCTTGCAGTATATGTAGGAGAGGCAATGAAACGATTTGTGATCCCAATATCATACTTGAACCAACCATCGTTTCAAGACTTGTTGAATCAAGCCGAGGAACAATTCGAATATGATCATCCAGCGGGTGGTCTCACTATTCCTTGTAGAGAAGATGTTTTCTTAGATATCACTTCTCGTTTGAGTAGGTGCTAA
Protein sequence	>MS.gene003602.t1 MGFRLPGIIRKTSSSKVVYVPKGYLAVYVGEAMKRFVIPISYLNQPSFQDLLNQAEEQFEYDHPAGGLTIPCREDVFLDITSRLSRC