AlfalfaGEDB | MS.gene75677

M. sativa cultivar XinJiangDaYe / MS.gene75677

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75677.t1	AES71920.1	97.8	92	2	0	1	92	1	92	5.00E-43	183.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75677.t1	P33083	75.8	91	20	2	1	90	1	90	1.3e-31	136.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75677.t1	G7JAQ3	97.8	92	2	0	1	92	1	92	3.6e-43	183.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene75677	MS.gene50651	PPI
MS.gene75677	MS.gene50656	PPI
MS.gene75677	MS.gene062969	PPI
MS.gene057809	MS.gene75677	PPI
MS.gene75677	MS.gene062962	PPI
MS.gene75677	MS.gene50666	PPI
MS.gene75677	MS.gene062985	PPI
MS.gene75677	MS.gene057784	PPI
MS.gene062978	MS.gene75677	PPI
MS.gene75677	MS.gene062953	PPI
MS.gene75677	MS.gene003622	PPI
MS.gene75677	MS.gene003599	PPI
MS.gene75677	MS.gene23368	PPI
MS.gene003593	MS.gene75677	PPI
MS.gene75677	MS.gene003585	PPI
MS.gene75677	MS.gene057817	PPI
MS.gene75677	MS.gene50668	PPI
MS.gene75677	MS.gene003581	PPI
MS.gene75677	MS.gene70684	PPI
MS.gene75677	MS.gene062958	PPI
MS.gene003580	MS.gene75677	PPI
MS.gene75677	MS.gene057798	PPI
MS.gene75677	MS.gene003612	PPI
MS.gene75677	MS.gene062983	PPI
MS.gene75677	MS.gene057777	PPI
MS.gene75677	MS.gene062967	PPI
MS.gene75677	MS.gene003579	PPI
MS.gene75677	MS.gene062940	PPI
MS.gene75677	MS.gene062989	PPI
MS.gene75677	MS.gene003595	PPI
MS.gene057816	MS.gene75677	PPI
MS.gene75677	MS.gene062959	PPI
MS.gene75677	MS.gene003607	PPI
MS.gene50772	MS.gene75677	PPI
MS.gene75677	MS.gene003606	PPI
MS.gene75677	MS.gene50686	PPI
MS.gene75677	MS.gene50664	PPI
MS.gene75677	MS.gene057785	PPI
MS.gene75677	MS.gene70683	PPI
MS.gene75677	MS.gene50670	PPI
MS.gene75677	MS.gene50669	PPI
MS.gene75677	MS.gene70685	PPI
MS.gene75677	MS.gene062941	PPI
MS.gene75677	MS.gene50662	PPI
MS.gene75677	MS.gene50660	PPI
MS.gene50683	MS.gene75677	PPI
MS.gene75677	MS.gene003623	PPI
MS.gene057807	MS.gene75677	PPI
MS.gene75677	MS.gene057799	PPI
MS.gene75677	MS.gene003628	PPI
MS.gene75677	MS.gene057794	PPI
MS.gene75677	MS.gene50688	PPI
MS.gene75677	MS.gene003629	PPI
MS.gene75677	MS.gene062966	PPI
MS.gene75677	MS.gene062980	PPI
MS.gene75677	MS.gene23367	PPI
MS.gene75677	MS.gene003610	PPI
MS.gene062946	MS.gene75677	PPI
MS.gene057805	MS.gene75677	PPI
MS.gene75677	MS.gene057802	PPI
MS.gene75677	MS.gene50773	PPI
MS.gene75677	MS.gene057796	PPI
MS.gene75677	MS.gene50682	PPI
MS.gene75677	MS.gene057800	PPI
MS.gene75677	MS.gene50653	PPI
MS.gene75677	MS.gene003597	PPI
MS.gene062971	MS.gene75677	PPI
MS.gene23373	MS.gene75677	PPI
MS.gene75677	MS.gene003598	PPI
MS.gene75677	MS.gene50690	PPI
MS.gene50657	MS.gene75677	PPI
MS.gene75677	MS.gene057780	PPI
MS.gene75677	MS.gene057788	PPI
MS.gene062975	MS.gene75677	PPI
MS.gene75677	MS.gene50685	PPI
MS.gene50689	MS.gene75677	PPI
MS.gene75677	MS.gene003613	PPI
MS.gene75677	MS.gene003584	PPI
MS.gene75677	MS.gene057791	PPI
MS.gene75677	MS.gene50674	PPI
MS.gene003576	MS.gene75677	PPI
MS.gene75677	MS.gene003603	PPI
MS.gene75677	MS.gene003630	PPI
MS.gene75677	MS.gene057782	PPI
MS.gene75677	MS.gene057779	PPI
MS.gene75677	MS.gene50673	PPI
MS.gene003626	MS.gene75677	PPI
MS.gene75677	MS.gene062965	PPI
MS.gene75677	MS.gene50771	PPI
MS.gene062970	MS.gene75677	PPI
MS.gene062942	MS.gene75677	PPI
MS.gene75677	MS.gene022358	PPI
MS.gene003605	MS.gene75677	PPI
MS.gene75677	MS.gene062954	PPI
MS.gene75677	MS.gene23369	PPI
MS.gene75677	MS.gene062986	PPI
MS.gene75677	MS.gene057783	PPI
MS.gene75677	MS.gene50770	PPI
MS.gene75677	MS.gene062987	PPI
MS.gene75677	MS.gene057811	PPI
MS.gene75677	MS.gene057806	PPI
MS.gene062972	MS.gene75677	PPI
MS.gene75677	MS.gene062964	PPI
MS.gene75677	MS.gene77525	PPI
MS.gene75677	MS.gene062944	PPI
MS.gene75677	MS.gene50658	PPI
MS.gene75677	MS.gene50655	PPI
MS.gene003582	MS.gene75677	PPI
MS.gene75677	MS.gene28863	PPI
MS.gene75677	MS.gene062945	PPI
MS.gene75677	MS.gene057804	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75677.t1	MTR_3g084170	97.826	92	2	0	1	92	1	92	5.57e-64	188
MS.gene75677.t1	MTR_3g084240	96.739	92	3	0	1	92	1	92	6.24e-63	185
MS.gene75677.t1	MTR_3g084220	93.478	92	6	0	1	92	1	92	1.74e-60	179
MS.gene75677.t1	MTR_3g110038	91.304	92	8	0	1	92	1	92	1.41e-58	174
MS.gene75677.t1	MTR_4g050700	88.172	93	10	1	1	92	1	93	2.41e-57	171
MS.gene75677.t1	MTR_2g012410	88.172	93	10	1	1	92	1	93	2.41e-57	171
MS.gene75677.t1	MTR_3g084150	88.172	93	9	2	1	92	1	92	9.16e-56	167
MS.gene75677.t1	MTR_3g084180	87.097	93	10	2	1	92	1	92	8.60e-55	165
MS.gene75677.t1	MTR_8g461410	84.946	93	12	2	1	92	1	92	2.82e-54	163
MS.gene75677.t1	MTR_3g110032	84.946	93	13	1	1	92	1	93	9.63e-53	159
MS.gene75677.t1	MTR_3g084260	81.720	93	16	1	1	92	1	93	7.52e-51	155
MS.gene75677.t1	MTR_3g110042	85.227	88	11	2	1	87	1	87	3.71e-50	153
MS.gene75677.t1	MTR_4g072270	75.269	93	22	1	1	92	1	93	1.28e-49	152
MS.gene75677.t1	MTR_4g072880	75.269	93	22	1	1	92	1	93	1.84e-48	149
MS.gene75677.t1	MTR_4g072310	75.269	93	22	1	1	92	1	93	6.07e-48	147
MS.gene75677.t1	MTR_4g072250	76.344	93	20	2	1	92	1	92	9.34e-48	147
MS.gene75677.t1	MTR_3g084200	95.833	72	3	0	1	72	1	72	2.71e-47	146
MS.gene75677.t1	MTR_4g072500	75.269	93	21	2	1	92	1	92	7.27e-47	145
MS.gene75677.t1	MTR_3g117630	78.889	90	18	1	4	92	3	92	7.77e-47	145
MS.gene75677.t1	MTR_4g072860	73.118	93	24	1	1	92	1	93	9.65e-47	144
MS.gene75677.t1	MTR_4g072480	70.652	92	27	0	1	92	1	92	2.00e-46	144
MS.gene75677.t1	MTR_4g072620	69.565	92	28	0	1	92	1	92	7.45e-46	142
MS.gene75677.t1	MTR_4g072230	76.344	93	19	2	1	92	1	91	8.81e-46	142
MS.gene75677.t1	MTR_4g072870	71.429	91	25	1	1	90	1	91	3.92e-45	140
MS.gene75677.t1	MTR_4g072730	69.231	91	28	0	1	91	1	91	6.69e-45	140
MS.gene75677.t1	MTR_4g072740	74.444	90	18	1	1	90	1	85	7.07e-45	139
MS.gene75677.t1	MTR_4g072640	75.824	91	20	2	1	90	1	90	8.51e-45	139
MS.gene75677.t1	MTR_4g072370	74.444	90	21	1	1	90	1	88	1.22e-44	139
MS.gene75677.t1	MTR_4g072490	72.222	90	20	1	1	90	1	85	1.59e-44	139
MS.gene75677.t1	MTR_4g072530	73.626	91	22	2	1	90	1	90	1.81e-44	139
MS.gene75677.t1	MTR_4g072470	73.333	90	19	1	1	90	1	85	4.14e-44	137
MS.gene75677.t1	MTR_4g072680	68.478	92	29	0	1	92	1	92	7.00e-44	137
MS.gene75677.t1	MTR_4g072240	70.330	91	26	1	1	90	1	91	1.10e-43	137
MS.gene75677.t1	MTR_4g072330	73.333	90	22	1	1	90	1	88	1.13e-43	137
MS.gene75677.t1	MTR_4g072300	70.330	91	26	1	1	90	1	91	3.93e-43	135
MS.gene75677.t1	MTR_4g072830	75.862	87	19	1	1	87	1	85	5.66e-43	135
MS.gene75677.t1	MTR_4g072260	68.817	93	28	1	1	92	1	93	5.99e-43	135
MS.gene75677.t1	MTR_4g072890	70.330	91	26	1	1	90	1	91	6.73e-43	135
MS.gene75677.t1	MTR_4g072580	73.563	87	18	1	1	87	1	82	7.12e-43	134
MS.gene75677.t1	MTR_4g072220	69.892	93	27	1	1	92	1	93	7.30e-43	135
MS.gene75677.t1	MTR_4g072630	71.111	90	22	1	1	90	1	86	9.10e-43	134
MS.gene75677.t1	MTR_4g072660	68.478	92	24	1	1	92	1	87	1.07e-42	134
MS.gene75677.t1	MTR_4g072465	71.111	90	22	1	1	90	1	86	1.41e-42	134
MS.gene75677.t1	MTR_3g084250	70.968	93	25	2	1	92	1	92	1.96e-42	134
MS.gene75677.t1	MTR_4g072460	66.304	92	31	0	1	92	1	92	3.51e-42	133
MS.gene75677.t1	MTR_4g072570	68.478	92	29	0	1	92	1	92	5.45e-42	132
MS.gene75677.t1	MTR_4g072380	72.527	91	19	2	1	90	1	86	8.05e-42	132
MS.gene75677.t1	MTR_4g072610	74.713	87	16	2	1	87	1	81	1.76e-41	131
MS.gene75677.t1	MTR_4g072850	71.277	94	25	1	1	92	1	94	2.78e-41	130
MS.gene75677.t1	MTR_4g072600	68.889	90	23	1	1	90	1	85	4.92e-41	130
MS.gene75677.t1	MTR_3g084210	67.391	92	30	0	1	92	1	92	6.57e-41	130
MS.gene75677.t1	MTR_4g072650	74.713	87	16	2	1	87	1	81	1.63e-40	129
MS.gene75677.t1	MTR_4g072590	71.111	90	21	1	1	90	1	85	3.81e-40	127
MS.gene75677.t1	MTR_4g072540	71.111	90	22	1	1	90	1	86	4.89e-40	127
MS.gene75677.t1	MTR_4g072510	70.000	90	23	1	1	90	1	86	2.08e-39	125
MS.gene75677.t1	MTR_3g084190	65.217	92	32	0	1	92	1	92	2.17e-39	126
MS.gene75677.t1	MTR_4g072670	70.000	90	23	1	1	90	1	86	2.30e-39	125
MS.gene75677.t1	MTR_4g072720	71.111	90	22	1	1	90	1	86	2.48e-39	125
MS.gene75677.t1	MTR_5g008370	68.132	91	29	0	1	91	1	91	2.97e-39	127
MS.gene75677.t1	MTR_8g461420	65.556	90	31	0	1	90	1	90	9.45e-39	124
MS.gene75677.t1	MTR_3g084230	65.556	90	31	0	1	90	1	90	3.12e-38	123
MS.gene75677.t1	MTR_4g072820	71.591	88	18	3	1	87	1	82	4.29e-38	122
MS.gene75677.t1	MTR_3g084160	64.130	92	33	0	1	92	1	92	5.77e-38	122
MS.gene75677.t1	MTR_5g008360	77.027	74	17	0	19	92	10	83	9.47e-38	121
MS.gene75677.t1	MTR_3g110045	66.667	90	30	0	3	92	62	151	8.60e-37	121
MS.gene75677.t1	MTR_8g461400	67.391	92	4	1	1	92	1	66	3.41e-36	117
MS.gene75677.t1	MTR_5g008350	68.354	79	20	1	1	79	1	74	4.32e-36	117
MS.gene75677.t1	MTR_4g072690	68.889	90	23	1	1	90	1	85	4.82e-36	117
MS.gene75677.t1	MTR_4g072940	68.478	92	27	1	3	92	33	124	5.70e-36	118
MS.gene75677.t1	MTR_4g072450	67.778	90	24	1	1	90	1	85	1.13e-35	116
MS.gene75677.t1	MTR_4g072550	61.957	92	32	1	4	92	12	103	4.26e-35	115
MS.gene75677.t1	MTR_4g072980	61.111	90	32	2	1	87	1	90	4.28e-34	112
MS.gene75677.t1	MTR_4g072770	77.778	63	14	0	25	87	15	77	2.71e-31	105
MS.gene75677.t1	MTR_4g072560	54.737	95	35	3	1	87	1	95	3.26e-31	105
MS.gene75677.t1	MTR_4g072290	60.215	93	22	2	1	92	1	79	5.40e-31	104
MS.gene75677.t1	MTR_4g072910	67.164	67	22	0	24	90	34	100	6.21e-30	102
MS.gene75677.t1	MTR_3g117640	52.577	97	36	2	1	87	1	97	1.44e-29	101
MS.gene75677.t1	MTR_4g072280	64.000	75	26	1	1	74	1	75	2.11e-27	95.5
MS.gene75677.t1	MTR_3g110035	66.667	66	22	0	27	92	73	138	1.06e-26	95.5
MS.gene75677.t1	MTR_4g072750	66.216	74	21	2	1	71	1	73	2.58e-26	92.8
MS.gene75677.t1	MTR_3g113310	60.000	65	25	1	23	87	40	103	2.03e-24	89.0
MS.gene75677.t1	MTR_3g117610	61.538	65	24	1	23	87	43	106	1.45e-23	86.7
MS.gene75677.t1	MTR_6g077850	55.224	67	30	0	24	90	33	99	3.11e-23	85.5
MS.gene75677.t1	MTR_4g072930	53.086	81	32	2	16	90	30	110	3.74e-23	85.9
MS.gene75677.t1	MTR_4g072190	50.602	83	39	2	5	87	17	97	4.00e-23	85.5
MS.gene75677.t1	MTR_2g043960	53.731	67	30	1	24	90	75	140	8.76e-21	81.3
MS.gene75677.t1	MTR_4g124750	54.545	66	29	1	24	89	68	132	1.86e-20	80.1
MS.gene75677.t1	MTR_4g072840	52.874	87	11	4	1	87	1	57	9.10e-20	75.9
MS.gene75677.t1	MTR_8g076040	50.704	71	34	1	17	87	33	102	1.69e-19	76.3
MS.gene75677.t1	MTR_5g021820	54.688	64	28	1	24	87	39	101	2.10e-19	75.9
MS.gene75677.t1	MTR_1g094750	49.412	85	38	2	5	85	26	109	2.52e-18	73.6
MS.gene75677.t1	MTR_1g009150	58.065	62	25	1	24	85	70	130	7.24e-18	73.9
MS.gene75677.t1	MTR_4g005310	45.679	81	42	2	11	89	48	128	2.66e-17	72.0
MS.gene75677.t1	MTR_3g109160	53.731	67	30	1	25	91	69	134	7.72e-16	68.6
MS.gene75677.t1	MTR_4g005320	52.459	61	28	1	25	85	70	129	1.15e-15	68.2
MS.gene75677.t1	MTR_1g024085	45.783	83	39	3	4	82	13	93	5.49e-15	65.9
MS.gene75677.t1	MTR_4g072160	52.308	65	28	2	22	85	34	96	1.26e-14	64.7
MS.gene75677.t1	MTR_8g461210	52.542	59	27	1	24	82	34	91	1.55e-14	63.9
MS.gene75677.t1	MTR_0388s0020	39.506	81	45	2	11	88	61	140	2.01e-14	64.3
MS.gene75677.t1	MTR_7g118010	47.059	68	33	2	25	90	23	89	2.32e-14	63.2
MS.gene75677.t1	MTR_3g105900	70.732	41	12	0	24	64	1171	1211	3.75e-14	66.6
MS.gene75677.t1	MTR_3g092220	44.928	69	35	2	16	82	24	91	4.28e-14	62.8
MS.gene75677.t1	MTR_1g063950	39.759	83	47	2	8	88	29	110	6.45e-14	62.4
MS.gene75677.t1	MTR_1g061570	47.059	68	35	1	24	91	18	84	2.03e-13	61.2
MS.gene75677.t1	MTR_7g101740	48.438	64	32	1	24	87	39	101	2.19e-13	60.8
MS.gene75677.t1	MTR_3g098970	34.568	81	52	1	12	92	40	119	2.22e-13	61.6
MS.gene75677.t1	MTR_7g405740	49.180	61	30	1	25	85	67	126	2.47e-13	62.0
MS.gene75677.t1	MTR_8g026730	42.647	68	36	2	25	90	27	93	3.86e-13	60.1
MS.gene75677.t1	MTR_4g021810	45.570	79	39	3	5	82	8	83	4.66e-13	59.7
MS.gene75677.t1	MTR_3g097120	43.421	76	34	2	18	85	2	76	9.76e-13	58.9
MS.gene75677.t1	MTR_1g059770	39.506	81	39	3	14	91	44	117	2.60e-12	58.5
MS.gene75677.t1	MTR_8g101520	37.647	85	47	2	8	87	28	111	8.18e-11	55.1
MS.gene75677.t1	MTR_2g066830	38.554	83	40	3	2	82	41	114	8.87e-11	54.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75677.t1	AT4G38840	73.529	68	17	1	24	90	32	99	1.82e-34	114
MS.gene75677.t1	AT5G18020	65.789	76	25	1	16	90	15	90	1.75e-32	108
MS.gene75677.t1	AT2G21200	70.000	70	20	1	19	87	15	84	2.28e-31	105
MS.gene75677.t1	AT5G18080	65.753	73	24	1	16	87	15	87	4.37e-31	105
MS.gene75677.t1	AT4G38825	68.116	69	21	1	20	87	18	86	8.74e-31	104
MS.gene75677.t1	AT5G18060	73.016	63	16	1	26	87	25	87	8.80e-31	104
MS.gene75677.t1	AT5G18050	64.384	73	25	1	16	87	15	87	1.39e-30	103
MS.gene75677.t1	AT5G18030	68.116	69	21	1	20	87	17	85	2.18e-30	103
MS.gene75677.t1	AT4G34770	66.667	75	23	1	19	91	29	103	5.05e-30	102
MS.gene75677.t1	AT2G21210	60.000	75	28	1	15	87	18	92	1.73e-29	101
MS.gene75677.t1	AT5G18010	63.014	73	26	1	16	87	15	87	3.45e-29	100
MS.gene75677.t1	AT2G21210	60.000	75	28	1	15	87	85	159	9.99e-29	101
MS.gene75677.t1	AT3G03820	55.682	88	36	1	7	91	9	96	2.66e-28	98.2
MS.gene75677.t1	AT3G03840	61.644	73	26	1	21	91	23	95	2.95e-28	98.2
MS.gene75677.t1	AT4G34800	52.174	92	37	2	1	89	1	88	3.38e-28	98.2
MS.gene75677.t1	AT4G38850	58.537	82	22	2	9	87	14	86	7.05e-28	97.1
MS.gene75677.t1	AT3G03850	56.383	94	29	3	8	91	2	93	7.31e-28	97.1
MS.gene75677.t1	AT4G34810	63.235	68	21	1	24	87	47	114	1.28e-27	97.4
MS.gene75677.t1	AT3G03830	61.842	76	23	2	15	87	17	89	1.09e-25	91.7
MS.gene75677.t1	AT4G13790	53.086	81	31	2	9	87	14	89	1.58e-25	91.3
MS.gene75677.t1	AT4G34780	58.108	74	28	1	17	87	20	93	7.96e-24	87.4
MS.gene75677.t1	AT4G38860	60.000	65	26	0	23	87	38	102	8.92e-24	87.0
MS.gene75677.t1	AT4G34790	61.538	65	23	1	25	87	39	103	1.14e-23	87.0
MS.gene75677.t1	AT1G75580	55.405	74	32	1	14	87	33	105	2.15e-23	86.3
MS.gene75677.t1	AT4G34760	58.462	65	26	1	23	87	41	104	8.94e-22	82.0
MS.gene75677.t1	AT2G21220	55.385	65	28	1	23	87	38	101	3.16e-21	80.5
MS.gene75677.t1	AT3G43120	51.471	68	32	1	24	91	78	144	3.27e-21	82.0
MS.gene75677.t1	AT5G20810	54.545	66	29	1	24	89	78	142	2.05e-20	80.1
MS.gene75677.t1	AT4G36110	54.545	66	29	1	24	89	39	103	2.27e-20	78.6
MS.gene75677.t1	AT5G20810	54.545	66	29	1	24	89	78	142	4.18e-20	80.1
MS.gene75677.t1	AT2G16580	55.385	65	28	1	23	87	42	105	7.68e-20	77.4
MS.gene75677.t1	AT2G18010	53.030	66	30	1	24	89	47	111	1.91e-19	76.3
MS.gene75677.t1	AT1G19830	58.730	63	25	1	20	82	43	104	6.09e-19	75.1
MS.gene75677.t1	AT3G20220	56.452	62	25	2	25	85	47	107	1.58e-18	74.3
MS.gene75677.t1	AT5G10990	48.611	72	36	1	11	82	27	97	1.01e-16	70.5
MS.gene75677.t1	AT5G66260	43.820	89	46	2	5	90	11	98	2.15e-16	68.2
MS.gene75677.t1	AT1G75590	50.704	71	31	2	12	82	32	98	5.92e-16	68.6
MS.gene75677.t1	AT1G19840	46.988	83	39	2	4	82	16	97	1.29e-15	67.8
MS.gene75677.t1	AT4G34750	39.744	78	46	1	10	87	22	98	2.51e-15	67.0
MS.gene75677.t1	AT4G34750	39.744	78	46	1	10	87	22	98	2.51e-15	67.0
MS.gene75677.t1	AT4G31320	54.098	61	27	1	25	85	80	139	3.99e-15	67.0
MS.gene75677.t1	AT2G24400	55.738	61	26	1	25	85	64	123	8.94e-15	65.9
MS.gene75677.t1	AT2G37030	47.692	65	33	1	24	88	48	111	1.02e-14	64.7
MS.gene75677.t1	AT2G46690	37.805	82	47	2	13	91	12	92	1.42e-14	64.3
MS.gene75677.t1	AT3G51200	47.761	67	33	2	18	83	32	97	2.95e-14	63.2
MS.gene75677.t1	AT3G61900	44.286	70	35	2	24	90	29	97	1.05e-13	62.4
MS.gene75677.t1	AT3G53250	37.500	80	44	2	11	88	36	111	7.50e-13	59.7
MS.gene75677.t1	AT3G12830	36.250	80	50	1	11	90	36	114	1.23e-12	59.3
MS.gene75677.t1	AT3G53250	43.077	65	33	1	24	88	82	142	1.76e-12	59.7
MS.gene75677.t1	AT4G00880	46.377	69	34	2	24	90	27	94	2.76e-12	58.2
MS.gene75677.t1	AT3G03847	42.353	85	45	4	3	85	48	130	5.64e-12	57.8
MS.gene75677.t1	AT4G09530	43.836	73	32	3	13	82	22	88	5.76e-12	57.0
MS.gene75677.t1	AT5G53590	40.278	72	37	2	24	90	45	115	7.01e-12	57.8
MS.gene75677.t1	AT1G56150	42.424	66	37	1	25	90	38	102	1.32e-11	56.2
MS.gene75677.t1	AT3G60690	42.424	66	34	2	25	87	88	152	2.09e-11	57.0

Find 25 sgRNAs with CRISPR-Local

Find 27 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATATTACTTCTTGCTTCAA+TGG	0.270966	3.3:-70568436	MS.gene75677:CDS
GTCTAATAGCTGCAGGTAAA+CGG	0.411664	3.3:+70568677	None:intergenic
CAAGAAAACGTCTTCTGTGC+AGG	0.425212	3.3:+70568459	None:intergenic
ATATTACTTCTTGCTTCAAT+GGG	0.427379	3.3:-70568435	MS.gene75677:CDS
AGTCAAGCCGAGGAAGAATT+CGG	0.460318	3.3:-70568514	MS.gene75677:CDS
GTTTACCTGCAGCTATTAGA+CGG	0.499927	3.3:-70568675	MS.gene75677:CDS
GTCATATCCGAATTCTTCCT+CGG	0.504640	3.3:+70568507	None:intergenic
TTTACCTGCAGCTATTAGAC+GGG	0.518841	3.3:-70568674	MS.gene75677:CDS
TTCGGATATGACCATCCAAT+GGG	0.545590	3.3:-70568496	MS.gene75677:CDS
GGCTATCTTGCAGTGTACGT+TGG	0.552838	3.3:-70568604	MS.gene75677:CDS
TACACTGCAAGATAGCCCTT+TGG	0.556003	3.3:+70568610	None:intergenic
GGAATTGTGAGGCCTCCCAT+TGG	0.558087	3.3:+70568481	None:intergenic
AAAGCATTGAATGTGCCAAA+GGG	0.566846	3.3:-70568625	MS.gene75677:CDS
AAAAGCATTGAATGTGCCAA+AGG	0.573182	3.3:-70568626	MS.gene75677:CDS
TTGTGAGGCCTCCCATTGGA+TGG	0.573771	3.3:+70568485	None:intergenic
ATTCGGATATGACCATCCAA+TGG	0.579573	3.3:-70568497	MS.gene75677:CDS
AAGAAAACGTCTTCTGTGCA+GGG	0.595412	3.3:+70568460	None:intergenic
GAAGCCCGTCTAATAGCTGC+AGG	0.598914	3.3:+70568670	None:intergenic
AAACTTGTTGAGTCAAGCCG+AGG	0.626433	3.3:-70568524	MS.gene75677:CDS
GCTTGGTTCAAGTATGACGT+GGG	0.632091	3.3:+70568556	None:intergenic
AGCTTGGTTCAAGTATGACG+TGG	0.646004	3.3:+70568555	None:intergenic
GGATATGACCATCCAATGGG+AGG	0.674999	3.3:-70568493	MS.gene75677:CDS
CTTCTGTGCAGGGAATTGTG+AGG	0.685633	3.3:+70568470	None:intergenic
CTTGGTTCAAGTATGACGTG+GGG	0.704961	3.3:+70568557	None:intergenic
ACGTTGGAGAGCAAATGAAG+CGG	0.725765	3.3:-70568588	MS.gene75677:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATATTACTTCTTGCTTCAAT+GGG	-	chr3.3:70568679-70568698	MS.gene75677:CDS	25.0%
	CATATTACTTCTTGCTTCAA+TGG	-	chr3.3:70568678-70568697	MS.gene75677:CDS	30.0%
!	CATTCAATGCTTTTGATGTT+TGG	+	chr3.3:70568482-70568501	None:intergenic	30.0%
!!!	ACAAGTTTTGAAATGAAGCT+TGG	+	chr3.3:70568578-70568597	None:intergenic	30.0%
!!	AAAAGCATTGAATGTGCCAA+AGG	-	chr3.3:70568488-70568507	MS.gene75677:CDS	35.0%
!!	AAAGCATTGAATGTGCCAAA+GGG	-	chr3.3:70568489-70568508	MS.gene75677:CDS	35.0%
	AAGAAAACGTCTTCTGTGCA+GGG	+	chr3.3:70568657-70568676	None:intergenic	40.0%
	ATTCGGATATGACCATCCAA+TGG	-	chr3.3:70568617-70568636	MS.gene75677:CDS	40.0%
	GTCATATCCGAATTCTTCCT+CGG	+	chr3.3:70568610-70568629	None:intergenic	40.0%
	GTCTAATAGCTGCAGGTAAA+CGG	+	chr3.3:70568440-70568459	None:intergenic	40.0%
	GTTTACCTGCAGCTATTAGA+CGG	-	chr3.3:70568439-70568458	MS.gene75677:CDS	40.0%
	TTCGGATATGACCATCCAAT+GGG	-	chr3.3:70568618-70568637	MS.gene75677:CDS	40.0%
	TTTACCTGCAGCTATTAGAC+GGG	-	chr3.3:70568440-70568459	MS.gene75677:CDS	40.0%
	ACGTTGGAGAGCAAATGAAG+CGG	-	chr3.3:70568526-70568545	MS.gene75677:CDS	45.0%
	AGCTTGGTTCAAGTATGACG+TGG	+	chr3.3:70568562-70568581	None:intergenic	45.0%
	AGTCAAGCCGAGGAAGAATT+CGG	-	chr3.3:70568600-70568619	MS.gene75677:CDS	45.0%
	CAAGAAAACGTCTTCTGTGC+AGG	+	chr3.3:70568658-70568677	None:intergenic	45.0%
	CTTGGTTCAAGTATGACGTG+GGG	+	chr3.3:70568560-70568579	None:intergenic	45.0%
	GCTTGGTTCAAGTATGACGT+GGG	+	chr3.3:70568561-70568580	None:intergenic	45.0%
	TACACTGCAAGATAGCCCTT+TGG	+	chr3.3:70568507-70568526	None:intergenic	45.0%
!!	AAACTTGTTGAGTCAAGCCG+AGG	-	chr3.3:70568590-70568609	MS.gene75677:CDS	45.0%
	CTTCTGTGCAGGGAATTGTG+AGG	+	chr3.3:70568647-70568666	None:intergenic	50.0%
	GGATATGACCATCCAATGGG+AGG	-	chr3.3:70568621-70568640	MS.gene75677:CDS	50.0%
	GGCTATCTTGCAGTGTACGT+TGG	-	chr3.3:70568510-70568529	MS.gene75677:CDS	50.0%
	GAAGCCCGTCTAATAGCTGC+AGG	+	chr3.3:70568447-70568466	None:intergenic	55.0%
	GGAATTGTGAGGCCTCCCAT+TGG	+	chr3.3:70568636-70568655	None:intergenic	55.0%
	TTGTGAGGCCTCCCATTGGA+TGG	+	chr3.3:70568632-70568651	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	70568429	70568707	70568429	ID=MS.gene75677
chr3.3	mRNA	70568429	70568707	70568429	ID=MS.gene75677.t1;Parent=MS.gene75677
chr3.3	exon	70568429	70568707	70568429	ID=MS.gene75677.t1.exon1;Parent=MS.gene75677.t1
chr3.3	CDS	70568429	70568707	70568429	ID=cds.MS.gene75677.t1;Parent=MS.gene75677.t1

Gene Sequence	>MS.gene75677 ATGGGTTTCCGTTTACCTGCAGCTATTAGACGGGCTTCATTCAGCAGTAGCCAAACATCAAAAGCATTGAATGTGCCAAAGGGCTATCTTGCAGTGTACGTTGGAGAGCAAATGAAGCGGTTTGTTATCCCCACGTCATACTTGAACCAAGCTTCATTTCAAAACTTGTTGAGTCAAGCCGAGGAAGAATTCGGATATGACCATCCAATGGGAGGCCTCACAATTCCCTGCACAGAAGACGTTTTCTTGCATATTACTTCTTGCTTCAATGGGCTATAA
Protein sequence	>MS.gene75677.t1 MGFRLPAAIRRASFSSSQTSKALNVPKGYLAVYVGEQMKRFVIPTSYLNQASFQNLLSQAEEEFGYDHPMGGLTIPCTEDVFLHITSCFNGL