AlfalfaGEDB | MS.gene045361

M. sativa cultivar XinJiangDaYe / MS.gene045361

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045361.t1	XP_003601677.1	95.7	92	4	0	1	92	1	92	3.80E-43	183.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045361.t1	P33080	75.0	92	23	0	1	92	1	92	2.5e-35	149.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045361.t1	G7JAR1	95.7	92	4	0	1	92	1	92	2.7e-43	183.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene045361	MS.gene50658	PPI
MS.gene062978	MS.gene045361	PPI
MS.gene045361	MS.gene50655	PPI
MS.gene045361	MS.gene28863	PPI
MS.gene045361	MS.gene062945	PPI
MS.gene045361	MS.gene057804	PPI
MS.gene045361	MS.gene50651	PPI
MS.gene50683	MS.gene045361	PPI
MS.gene045361	MS.gene50656	PPI
MS.gene045361	MS.gene062969	PPI
MS.gene057807	MS.gene045361	PPI
MS.gene045361	MS.gene062962	PPI
MS.gene045361	MS.gene50666	PPI
MS.gene045361	MS.gene062985	PPI
MS.gene045361	MS.gene057784	PPI
MS.gene045361	MS.gene062953	PPI
MS.gene045361	MS.gene003622	PPI
MS.gene045361	MS.gene003599	PPI
MS.gene057816	MS.gene045361	PPI
MS.gene062946	MS.gene045361	PPI
MS.gene045361	MS.gene23368	PPI
MS.gene045361	MS.gene003585	PPI
MS.gene045361	MS.gene057817	PPI
MS.gene045361	MS.gene50668	PPI
MS.gene045361	MS.gene003581	PPI
MS.gene045361	MS.gene70684	PPI
MS.gene045361	MS.gene062958	PPI
MS.gene045361	MS.gene057798	PPI
MS.gene045361	MS.gene003612	PPI
MS.gene045361	MS.gene062983	PPI
MS.gene045361	MS.gene057777	PPI
MS.gene045361	MS.gene062967	PPI
MS.gene50657	MS.gene045361	PPI
MS.gene045361	MS.gene003579	PPI
MS.gene045361	MS.gene062940	PPI
MS.gene045361	MS.gene062989	PPI
MS.gene062975	MS.gene045361	PPI
MS.gene045361	MS.gene003595	PPI
MS.gene045361	MS.gene062959	PPI
MS.gene045361	MS.gene003607	PPI
MS.gene50689	MS.gene045361	PPI
MS.gene045361	MS.gene003606	PPI
MS.gene045361	MS.gene50686	PPI
MS.gene045361	MS.gene50664	PPI
MS.gene045361	MS.gene057785	PPI
MS.gene003576	MS.gene045361	PPI
MS.gene045361	MS.gene70683	PPI
MS.gene045361	MS.gene50670	PPI
MS.gene045361	MS.gene50669	PPI
MS.gene045361	MS.gene70685	PPI
MS.gene003626	MS.gene045361	PPI
MS.gene045361	MS.gene062941	PPI
MS.gene062970	MS.gene045361	PPI
MS.gene045361	MS.gene50662	PPI
MS.gene045361	MS.gene50660	PPI
MS.gene057805	MS.gene045361	PPI
MS.gene062942	MS.gene045361	PPI
MS.gene045361	MS.gene003623	PPI
MS.gene003605	MS.gene045361	PPI
MS.gene045361	MS.gene057799	PPI
MS.gene045361	MS.gene003628	PPI
MS.gene045361	MS.gene057794	PPI
MS.gene045361	MS.gene50688	PPI
MS.gene045361	MS.gene003629	PPI
MS.gene062971	MS.gene045361	PPI
MS.gene23373	MS.gene045361	PPI
MS.gene045361	MS.gene062966	PPI
MS.gene045361	MS.gene062980	PPI
MS.gene045361	MS.gene23367	PPI
MS.gene045361	MS.gene003610	PPI
MS.gene003582	MS.gene045361	PPI
MS.gene045361	MS.gene057802	PPI
MS.gene045361	MS.gene50773	PPI
MS.gene045361	MS.gene057796	PPI
MS.gene045361	MS.gene50682	PPI
MS.gene045361	MS.gene057800	PPI
MS.gene045361	MS.gene50653	PPI
MS.gene045361	MS.gene003597	PPI
MS.gene045361	MS.gene003598	PPI
MS.gene045361	MS.gene50690	PPI
MS.gene057809	MS.gene045361	PPI
MS.gene045361	MS.gene057780	PPI
MS.gene045361	MS.gene057788	PPI
MS.gene045361	MS.gene50685	PPI
MS.gene045361	MS.gene003613	PPI
MS.gene045361	MS.gene003584	PPI
MS.gene045361	MS.gene057791	PPI
MS.gene045361	MS.gene50674	PPI
MS.gene045361	MS.gene003603	PPI
MS.gene045361	MS.gene003630	PPI
MS.gene003593	MS.gene045361	PPI
MS.gene045361	MS.gene057782	PPI
MS.gene062972	MS.gene045361	PPI
MS.gene045361	MS.gene057779	PPI
MS.gene045361	MS.gene50673	PPI
MS.gene003580	MS.gene045361	PPI
MS.gene045361	MS.gene062965	PPI
MS.gene045361	MS.gene50771	PPI
MS.gene045361	MS.gene022358	PPI
MS.gene045361	MS.gene062954	PPI
MS.gene045361	MS.gene23369	PPI
MS.gene045361	MS.gene062986	PPI
MS.gene045361	MS.gene057783	PPI
MS.gene045361	MS.gene50770	PPI
MS.gene045361	MS.gene062987	PPI
MS.gene50772	MS.gene045361	PPI
MS.gene045361	MS.gene057811	PPI
MS.gene045361	MS.gene057806	PPI
MS.gene045361	MS.gene062964	PPI
MS.gene045361	MS.gene77525	PPI
MS.gene045361	MS.gene062944	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045361.t1	MTR_3g084250	95.652	92	4	0	1	92	1	92	1.76e-61	182
MS.gene045361.t1	MTR_3g084190	86.957	92	12	0	1	92	1	92	3.91e-50	153
MS.gene045361.t1	MTR_3g084150	75.000	92	23	0	1	92	1	92	6.27e-50	152
MS.gene045361.t1	MTR_3g084210	84.783	92	14	0	1	92	1	92	7.00e-50	152
MS.gene045361.t1	MTR_8g461420	86.667	90	12	0	1	90	1	90	1.88e-49	151
MS.gene045361.t1	MTR_8g461410	73.913	92	24	0	1	92	1	92	3.11e-49	150
MS.gene045361.t1	MTR_3g084180	73.913	92	24	0	1	92	1	92	3.55e-49	150
MS.gene045361.t1	MTR_3g084230	86.667	90	12	0	1	90	1	90	6.08e-49	150
MS.gene045361.t1	MTR_3g084160	84.783	92	14	0	1	92	1	92	3.97e-48	148
MS.gene045361.t1	MTR_3g110045	86.667	90	12	0	3	92	62	151	6.53e-48	149
MS.gene045361.t1	MTR_4g072500	71.739	92	26	0	1	92	1	92	4.26e-46	143
MS.gene045361.t1	MTR_4g072310	69.892	93	27	1	1	92	1	93	4.69e-45	140
MS.gene045361.t1	MTR_4g072570	70.652	92	27	0	1	92	1	92	7.38e-45	140
MS.gene045361.t1	MTR_4g072880	68.817	93	28	1	1	92	1	93	1.19e-44	139
MS.gene045361.t1	MTR_3g084170	70.968	93	25	2	1	92	1	92	1.18e-43	137
MS.gene045361.t1	MTR_4g072480	69.565	92	28	0	1	92	1	92	1.61e-43	136
MS.gene045361.t1	MTR_4g072230	69.892	93	25	2	1	92	1	91	1.99e-43	136
MS.gene045361.t1	MTR_4g072530	70.000	90	27	0	1	90	1	90	2.06e-43	136
MS.gene045361.t1	MTR_4g050700	69.892	93	27	1	1	92	1	93	2.09e-43	136
MS.gene045361.t1	MTR_2g012410	69.892	93	27	1	1	92	1	93	2.09e-43	136
MS.gene045361.t1	MTR_4g072370	72.222	90	23	1	1	90	1	88	2.30e-43	136
MS.gene045361.t1	MTR_3g110042	70.787	89	26	0	1	89	1	89	2.98e-43	135
MS.gene045361.t1	MTR_3g110032	67.742	93	29	1	1	92	1	93	3.39e-43	135
MS.gene045361.t1	MTR_3g084240	69.892	93	26	2	1	92	1	92	9.52e-43	134
MS.gene045361.t1	MTR_4g072270	68.817	93	28	1	1	92	1	93	1.29e-42	134
MS.gene045361.t1	MTR_4g072250	68.817	93	27	2	1	92	1	92	1.78e-42	134
MS.gene045361.t1	MTR_4g072620	67.391	92	30	0	1	92	1	92	2.61e-42	133
MS.gene045361.t1	MTR_4g072680	67.391	92	30	0	1	92	1	92	2.85e-42	133
MS.gene045361.t1	MTR_4g072870	69.231	91	27	1	1	90	1	91	3.09e-42	133
MS.gene045361.t1	MTR_3g117630	71.765	85	24	0	8	92	8	92	4.72e-42	132
MS.gene045361.t1	MTR_4g072830	70.787	89	24	1	1	89	1	87	5.86e-42	132
MS.gene045361.t1	MTR_4g072330	66.667	90	28	1	1	90	1	88	8.99e-42	132
MS.gene045361.t1	MTR_4g072640	67.778	90	29	0	1	90	1	90	9.85e-42	132
MS.gene045361.t1	MTR_4g072240	68.132	91	28	1	1	90	1	91	1.20e-41	131
MS.gene045361.t1	MTR_3g110038	68.817	93	27	2	1	92	1	92	1.27e-41	131
MS.gene045361.t1	MTR_3g084220	68.817	93	27	2	1	92	1	92	2.32e-41	131
MS.gene045361.t1	MTR_4g072860	66.667	93	30	1	1	92	1	93	2.36e-41	131
MS.gene045361.t1	MTR_4g072580	70.000	90	22	1	1	90	1	85	3.66e-41	130
MS.gene045361.t1	MTR_4g072820	73.626	91	17	2	1	90	1	85	4.99e-41	130
MS.gene045361.t1	MTR_4g072730	65.934	91	31	0	1	91	1	91	5.28e-41	130
MS.gene045361.t1	MTR_4g072460	65.217	92	32	0	1	92	1	92	8.46e-41	129
MS.gene045361.t1	MTR_4g072300	67.033	91	29	1	1	90	1	91	9.06e-41	129
MS.gene045361.t1	MTR_4g072490	68.889	90	23	1	1	90	1	85	9.26e-41	129
MS.gene045361.t1	MTR_3g084260	66.667	93	30	1	1	92	1	93	9.31e-41	129
MS.gene045361.t1	MTR_4g072740	70.000	90	22	1	1	90	1	85	1.13e-40	129
MS.gene045361.t1	MTR_4g072260	66.667	93	30	1	1	92	1	93	1.88e-40	129
MS.gene045361.t1	MTR_4g072610	68.889	90	22	1	1	90	1	84	2.50e-40	128
MS.gene045361.t1	MTR_4g072220	67.742	93	29	1	1	92	1	93	2.76e-40	128
MS.gene045361.t1	MTR_4g072600	70.000	90	22	1	1	90	1	85	5.68e-40	127
MS.gene045361.t1	MTR_4g072890	67.033	91	29	1	1	90	1	91	1.05e-39	127
MS.gene045361.t1	MTR_4g072650	68.889	90	22	1	1	90	1	84	2.06e-39	125
MS.gene045361.t1	MTR_4g072630	68.889	90	24	1	1	90	1	86	2.20e-39	125
MS.gene045361.t1	MTR_4g072470	68.889	90	23	1	1	90	1	85	3.24e-39	125
MS.gene045361.t1	MTR_4g072850	71.277	94	25	1	1	92	1	94	3.03e-38	123
MS.gene045361.t1	MTR_4g072465	65.556	90	27	1	1	90	1	86	7.19e-38	122
MS.gene045361.t1	MTR_4g072540	70.000	90	23	1	1	90	1	86	1.16e-37	121
MS.gene045361.t1	MTR_4g072380	68.132	91	23	2	1	90	1	86	4.42e-36	117
MS.gene045361.t1	MTR_4g072670	66.667	90	26	1	1	90	1	86	5.84e-36	117
MS.gene045361.t1	MTR_4g072720	70.000	90	23	1	1	90	1	86	6.04e-36	117
MS.gene045361.t1	MTR_4g072660	60.870	92	31	1	1	92	1	87	1.16e-35	116
MS.gene045361.t1	MTR_4g072590	68.889	90	23	1	1	90	1	85	1.44e-35	116
MS.gene045361.t1	MTR_5g008360	67.089	79	26	0	14	92	5	83	5.98e-35	114
MS.gene045361.t1	MTR_4g072940	69.565	92	26	1	3	92	33	124	5.99e-35	115
MS.gene045361.t1	MTR_4g072510	65.556	90	27	1	1	90	1	86	1.47e-34	114
MS.gene045361.t1	MTR_4g072450	66.667	90	25	1	1	90	1	85	2.28e-33	110
MS.gene045361.t1	MTR_3g110035	78.788	66	14	0	27	92	73	138	3.90e-33	112
MS.gene045361.t1	MTR_4g072690	65.556	90	26	1	1	90	1	85	1.11e-32	108
MS.gene045361.t1	MTR_4g072980	53.684	95	41	2	1	92	1	95	3.39e-32	108
MS.gene045361.t1	MTR_5g008370	58.242	91	38	0	1	91	1	91	1.27e-31	108
MS.gene045361.t1	MTR_4g072550	65.753	73	25	0	20	92	31	103	2.11e-31	106
MS.gene045361.t1	MTR_5g008350	64.557	79	23	1	1	79	1	74	3.40e-31	105
MS.gene045361.t1	MTR_4g072910	65.672	67	23	0	24	90	34	100	1.05e-30	104
MS.gene045361.t1	MTR_3g084200	67.123	73	22	2	1	72	1	72	1.12e-30	104
MS.gene045361.t1	MTR_4g072770	57.778	90	28	1	1	90	1	80	1.19e-30	103
MS.gene045361.t1	MTR_4g072560	50.515	97	40	3	1	89	1	97	1.36e-29	101
MS.gene045361.t1	MTR_4g072750	62.500	80	28	1	1	78	1	80	5.97e-29	99.8
MS.gene045361.t1	MTR_4g072280	62.667	75	27	1	1	74	1	75	1.00e-28	99.0
MS.gene045361.t1	MTR_4g072290	52.688	93	29	2	1	92	1	79	1.78e-27	95.9
MS.gene045361.t1	MTR_3g117640	60.870	69	26	1	24	91	33	101	6.96e-27	95.1
MS.gene045361.t1	MTR_3g113310	57.353	68	28	1	22	89	39	105	4.71e-23	85.5
MS.gene045361.t1	MTR_3g117610	58.462	65	26	1	23	87	43	106	2.83e-22	83.6
MS.gene045361.t1	MTR_4g072930	43.529	85	44	1	10	90	26	110	3.65e-22	83.2
MS.gene045361.t1	MTR_6g077850	49.254	67	34	0	24	90	33	99	5.04e-22	82.4
MS.gene045361.t1	MTR_8g461400	50.538	93	18	3	1	92	1	66	7.09e-22	81.3
MS.gene045361.t1	MTR_4g072840	53.846	91	10	3	1	90	1	60	5.70e-21	78.6
MS.gene045361.t1	MTR_4g072190	55.224	67	29	1	23	89	34	99	7.48e-21	79.7
MS.gene045361.t1	MTR_5g021820	48.810	84	39	2	9	89	21	103	5.61e-20	77.4
MS.gene045361.t1	MTR_4g025830	52.941	68	28	2	25	89	79	145	7.19e-20	79.0
MS.gene045361.t1	MTR_8g076040	54.688	64	28	1	24	87	40	102	3.35e-18	72.8
MS.gene045361.t1	MTR_4g124750	55.932	59	25	1	24	82	68	125	1.93e-17	72.4
MS.gene045361.t1	MTR_0388s0020	52.778	72	29	3	10	78	61	130	2.03e-17	72.0
MS.gene045361.t1	MTR_2g043960	53.030	66	30	1	17	82	68	132	8.96e-17	70.9
MS.gene045361.t1	MTR_1g063950	47.826	69	35	1	17	85	40	107	9.04e-17	69.7
MS.gene045361.t1	MTR_1g094750	46.835	79	37	3	10	84	31	108	1.55e-16	68.9
MS.gene045361.t1	MTR_4g005310	49.296	71	33	2	14	82	51	120	1.97e-16	69.7
MS.gene045361.t1	MTR_8g461210	46.667	75	39	1	8	82	18	91	3.61e-16	68.2
MS.gene045361.t1	MTR_1g024085	45.455	77	39	2	8	82	18	93	3.68e-16	68.9
MS.gene045361.t1	MTR_7g101740	51.562	64	30	1	24	87	39	101	4.87e-16	67.8
MS.gene045361.t1	MTR_1g009150	55.385	65	28	1	18	82	64	127	6.12e-16	68.9
MS.gene045361.t1	MTR_4g072160	51.786	56	26	1	24	79	36	90	6.93e-16	67.8
MS.gene045361.t1	MTR_3g092220	47.059	68	33	2	17	82	25	91	5.82e-15	65.1
MS.gene045361.t1	MTR_7g118010	51.667	60	26	2	25	82	23	81	9.82e-15	64.3
MS.gene045361.t1	MTR_1g061570	52.542	59	27	1	24	82	18	75	1.81e-14	63.9
MS.gene045361.t1	MTR_4g005320	53.448	58	26	1	25	82	70	126	4.55e-14	63.9
MS.gene045361.t1	MTR_7g405740	39.286	84	44	3	6	84	44	125	1.40e-13	62.4
MS.gene045361.t1	MTR_8g026730	50.000	60	27	2	25	82	27	85	1.89e-13	60.8
MS.gene045361.t1	MTR_8g101520	41.975	81	46	1	10	90	35	114	3.12e-13	61.6
MS.gene045361.t1	MTR_8g096470	47.458	59	30	1	26	84	47	104	1.30e-12	58.9
MS.gene045361.t1	MTR_3g109160	51.724	58	27	1	25	82	69	125	2.44e-12	59.3
MS.gene045361.t1	MTR_3g098970	35.714	70	44	1	23	92	51	119	2.77e-12	58.9
MS.gene045361.t1	MTR_3g097120	39.744	78	38	2	20	89	4	80	2.88e-12	57.8
MS.gene045361.t1	MTR_3g105900	69.444	36	11	0	24	59	1171	1206	4.67e-12	60.5
MS.gene045361.t1	MTR_8g096440	40.789	76	42	2	10	85	32	104	5.06e-12	58.2
MS.gene045361.t1	MTR_8g096500	45.902	61	32	1	25	85	49	108	5.20e-12	58.5
MS.gene045361.t1	MTR_1g059770	36.923	65	40	1	25	89	49	112	4.33e-11	55.5
MS.gene045361.t1	MTR_2g066830	41.379	58	33	1	25	82	58	114	6.10e-11	55.1
MS.gene045361.t1	MTR_4g021810	50.000	66	31	2	18	82	19	83	8.85e-11	53.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045361.t1	AT4G38840	52.525	99	38	2	1	90	1	99	2.03e-30	103
MS.gene045361.t1	AT2G21200	63.889	72	25	1	19	89	15	86	2.48e-29	100
MS.gene045361.t1	AT2G21210	51.579	95	41	2	1	90	1	95	2.92e-29	100
MS.gene045361.t1	AT5G18080	61.333	75	28	1	17	90	16	90	4.30e-29	100
MS.gene045361.t1	AT3G03840	63.014	73	25	1	21	91	23	95	5.29e-29	100
MS.gene045361.t1	AT5G18020	58.667	75	30	1	17	90	16	90	6.01e-29	99.8
MS.gene045361.t1	AT3G03820	60.526	76	27	1	19	91	21	96	6.14e-29	100
MS.gene045361.t1	AT5G18050	59.459	74	29	1	17	89	16	89	7.27e-29	99.8
MS.gene045361.t1	AT5G18060	66.667	66	21	1	26	90	25	90	9.78e-29	99.4
MS.gene045361.t1	AT2G21210	51.579	95	41	2	1	90	68	162	1.04e-28	101
MS.gene045361.t1	AT5G18010	58.667	75	30	1	17	90	16	90	1.52e-28	99.0
MS.gene045361.t1	AT4G34800	54.651	86	32	2	1	83	1	82	2.25e-28	98.6
MS.gene045361.t1	AT4G38825	58.667	75	30	1	17	90	15	89	2.78e-28	98.2
MS.gene045361.t1	AT5G18030	60.811	74	28	1	18	90	15	88	3.67e-28	97.8
MS.gene045361.t1	AT4G38850	60.870	69	24	1	25	90	21	89	9.38e-28	96.7
MS.gene045361.t1	AT4G34770	60.526	76	28	1	18	91	28	103	2.36e-27	96.3
MS.gene045361.t1	AT3G03850	64.706	68	22	1	26	91	26	93	3.65e-27	95.5
MS.gene045361.t1	AT4G34810	63.380	71	21	2	24	89	47	117	4.35e-27	95.9
MS.gene045361.t1	AT4G13790	49.438	89	38	2	3	89	8	91	1.03e-24	89.4
MS.gene045361.t1	AT4G34790	58.571	70	25	2	25	90	39	108	3.01e-24	88.6
MS.gene045361.t1	AT3G03830	51.136	88	36	2	10	90	5	92	5.55e-24	87.4
MS.gene045361.t1	AT4G34780	57.143	70	27	1	23	89	26	95	1.37e-23	86.7
MS.gene045361.t1	AT4G38860	55.882	68	30	0	23	90	38	105	1.20e-22	84.3
MS.gene045361.t1	AT2G21220	48.810	84	39	2	9	89	21	103	3.93e-21	80.5
MS.gene045361.t1	AT1G75580	48.193	83	42	1	7	89	26	107	7.87e-21	79.7
MS.gene045361.t1	AT4G34760	53.731	67	30	1	23	89	41	106	8.91e-20	77.0
MS.gene045361.t1	AT3G43120	55.072	69	30	1	14	82	68	135	4.75e-19	76.6
MS.gene045361.t1	AT5G66260	46.512	86	41	3	8	90	15	98	1.33e-18	73.9
MS.gene045361.t1	AT1G19830	56.667	60	25	1	23	82	46	104	1.66e-17	71.6
MS.gene045361.t1	AT2G45210	47.059	68	32	2	25	89	79	145	2.64e-17	72.4
MS.gene045361.t1	AT2G16580	50.746	67	32	1	23	89	42	107	3.93e-17	70.5
MS.gene045361.t1	AT5G20810	53.030	66	30	1	17	82	71	135	1.75e-16	70.1
MS.gene045361.t1	AT5G20810	53.030	66	30	1	17	82	71	135	1.75e-16	70.9
MS.gene045361.t1	AT4G36110	52.542	59	27	1	24	82	39	96	1.76e-16	68.6
MS.gene045361.t1	AT2G18010	52.542	59	27	1	24	82	47	104	5.46e-16	67.4
MS.gene045361.t1	AT2G37030	50.794	63	30	1	24	86	48	109	7.60e-16	67.4
MS.gene045361.t1	AT3G20220	49.231	65	31	2	19	82	41	104	1.47e-15	66.6
MS.gene045361.t1	AT3G60690	47.059	68	32	2	25	89	88	154	2.36e-15	67.4
MS.gene045361.t1	AT4G34750	45.588	68	35	2	16	82	27	93	3.11e-15	66.6
MS.gene045361.t1	AT4G34750	45.588	68	35	2	16	82	27	93	3.11e-15	66.6
MS.gene045361.t1	AT1G75590	49.153	59	29	1	24	82	41	98	3.49e-15	66.6
MS.gene045361.t1	AT3G51200	47.368	76	35	3	9	83	26	97	7.86e-15	64.3
MS.gene045361.t1	AT5G10990	47.458	59	30	1	24	82	40	97	1.00e-14	65.1
MS.gene045361.t1	AT3G61900	44.304	79	38	3	17	90	20	97	1.47e-14	64.7
MS.gene045361.t1	AT2G46690	42.308	78	41	2	17	91	16	92	1.53e-14	63.9
MS.gene045361.t1	AT4G00880	50.000	68	31	2	17	82	20	86	3.57e-14	63.2
MS.gene045361.t1	AT1G19840	47.458	59	30	1	24	82	40	97	1.07e-13	62.8
MS.gene045361.t1	AT3G53250	41.270	63	33	1	24	86	51	109	3.37e-13	60.8
MS.gene045361.t1	AT3G53250	41.270	63	33	1	24	86	82	140	5.81e-13	60.8
MS.gene045361.t1	AT4G12410	44.118	68	34	2	25	89	76	142	6.71e-13	60.8
MS.gene045361.t1	AT5G53590	41.667	72	36	2	24	90	45	115	1.22e-12	59.7
MS.gene045361.t1	AT3G12830	42.466	73	40	2	10	82	36	106	1.54e-12	59.3
MS.gene045361.t1	AT4G22620	42.647	68	35	2	25	89	79	145	2.38e-12	59.3
MS.gene045361.t1	AT4G31320	51.724	58	27	1	25	82	80	136	2.73e-12	59.7
MS.gene045361.t1	AT1G56150	46.552	58	30	1	25	82	38	94	3.10e-12	57.8
MS.gene045361.t1	AT2G24400	53.448	58	26	1	25	82	64	120	3.39e-12	59.3
MS.gene045361.t1	AT1G16510	43.478	69	36	2	25	91	54	121	3.81e-12	58.5
MS.gene045361.t1	AT4G09530	40.845	71	38	3	15	82	19	88	1.21e-11	56.2

Find 23 sgRNAs with CRISPR-Local

Find 23 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGAAGTCCCAAAAGGCTATT+TGG	0.303403	3.4:+78907319	MS.gene045361:CDS
TACACCGCCAAATAGCCTTT+TGG	0.342893	3.4:-78907326	None:intergenic
GGCTCATTCAAGAATGCTAC+TGG	0.424855	3.4:-78907380	None:intergenic
AGCCAAGCTGAAGAGGAATT+CGG	0.465601	3.4:+78907422	MS.gene045361:CDS
GGCTATTTGGCGGTGTATGT+TGG	0.485893	3.4:+78907332	MS.gene045361:CDS
CAAACAACTTCCCGCTTGAA+CGG	0.502878	3.4:+78907500	MS.gene045361:CDS
TTCGGTTACTGTCATCCAAT+GGG	0.509016	3.4:+78907440	MS.gene045361:CDS
ATTGTTGAGCCAAGCTGAAG+AGG	0.511575	3.4:+78907415	MS.gene045361:CDS
CTCAACAATTCTTGAAACAA+AGG	0.523717	3.4:-78907401	None:intergenic
AACCGAATTCCTCTTCAGCT+TGG	0.531525	3.4:-78907424	None:intergenic
AGACGATCATCATTTACTGC+AGG	0.545214	3.4:+78907275	MS.gene045361:CDS
ATTCGGTTACTGTCATCCAA+TGG	0.545501	3.4:+78907439	MS.gene045361:CDS
AAGCAAGTGGAAGTCCCAAA+AGG	0.556539	3.4:+78907311	MS.gene045361:CDS
TGGTCTTACAATTCCGTGCA+AGG	0.568284	3.4:+78907463	MS.gene045361:CDS
TTAATTATAGGCCGTTCAAG+CGG	0.579375	3.4:-78907511	None:intergenic
TAATTATAGGCCGTTCAAGC+GGG	0.584673	3.4:-78907510	None:intergenic
TCAGTCATCTAGCAAGCAAG+TGG	0.591877	3.4:+78907298	MS.gene045361:CDS
AATGATGATCGTCTAATACC+AGG	0.609196	3.4:-78907266	None:intergenic
TTTGGCGGTGTATGTTGGCG+AGG	0.609936	3.4:+78907337	MS.gene045361:CDS
GGAATTGTAAGACCACCCAT+TGG	0.626538	3.4:-78907455	None:intergenic
AGTCCCAAAAGGCTATTTGG+CGG	0.628040	3.4:+78907322	MS.gene045361:CDS
GGTTACTGTCATCCAATGGG+TGG	0.661329	3.4:+78907443	MS.gene045361:CDS
ATGTTGGCGAGGAAATGAAG+AGG	0.714833	3.4:+78907348	MS.gene045361:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AAAAACAAATCTTCCTTGCA+CGG	-	chr3.4:78907479-78907498	None:intergenic	30.0%
	CTCAACAATTCTTGAAACAA+AGG	-	chr3.4:78907404-78907423	None:intergenic	30.0%
	AATGATGATCGTCTAATACC+AGG	-	chr3.4:78907269-78907288	None:intergenic	35.0%
	AGACGATCATCATTTACTGC+AGG	+	chr3.4:78907275-78907294	MS.gene045361:CDS	40.0%
	ATTCGGTTACTGTCATCCAA+TGG	+	chr3.4:78907439-78907458	MS.gene045361:CDS	40.0%
	TTCGGTTACTGTCATCCAAT+GGG	+	chr3.4:78907440-78907459	MS.gene045361:CDS	40.0%
	AACCGAATTCCTCTTCAGCT+TGG	-	chr3.4:78907427-78907446	None:intergenic	45.0%
	AAGCAAGTGGAAGTCCCAAA+AGG	+	chr3.4:78907311-78907330	MS.gene045361:CDS	45.0%
	AGCCAAGCTGAAGAGGAATT+CGG	+	chr3.4:78907422-78907441	MS.gene045361:CDS	45.0%
	AGTCCCAAAAGGCTATTTGG+CGG	+	chr3.4:78907322-78907341	MS.gene045361:CDS	45.0%
	ATGTTGGCGAGGAAATGAAG+AGG	+	chr3.4:78907348-78907367	MS.gene045361:CDS	45.0%
	ATTGTTGAGCCAAGCTGAAG+AGG	+	chr3.4:78907415-78907434	MS.gene045361:CDS	45.0%
	CAAACAACTTCCCGCTTGAA+CGG	+	chr3.4:78907500-78907519	MS.gene045361:CDS	45.0%
	GGAAGTCCCAAAAGGCTATT+TGG	+	chr3.4:78907319-78907338	MS.gene045361:CDS	45.0%
	GGAATTGTAAGACCACCCAT+TGG	-	chr3.4:78907458-78907477	None:intergenic	45.0%
	GGCTCATTCAAGAATGCTAC+TGG	-	chr3.4:78907383-78907402	None:intergenic	45.0%
	TCAGTCATCTAGCAAGCAAG+TGG	+	chr3.4:78907298-78907317	MS.gene045361:CDS	45.0%
!	ACACCGCCAAATAGCCTTTT+GGG	-	chr3.4:78907328-78907347	None:intergenic	45.0%
!	TACACCGCCAAATAGCCTTT+TGG	-	chr3.4:78907329-78907348	None:intergenic	45.0%
!	TGGTCTTACAATTCCGTGCA+AGG	+	chr3.4:78907463-78907482	MS.gene045361:CDS	45.0%
	GGCTATTTGGCGGTGTATGT+TGG	+	chr3.4:78907332-78907351	MS.gene045361:CDS	50.0%
	GGTTACTGTCATCCAATGGG+TGG	+	chr3.4:78907443-78907462	MS.gene045361:CDS	50.0%
	TTTGGCGGTGTATGTTGGCG+AGG	+	chr3.4:78907337-78907356	MS.gene045361:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.4	gene	78907251	78907529	78907251	ID=MS.gene045361
chr3.4	mRNA	78907251	78907529	78907251	ID=MS.gene045361.t1;Parent=MS.gene045361
chr3.4	exon	78907251	78907529	78907251	ID=MS.gene045361.t1.exon1;Parent=MS.gene045361.t1
chr3.4	CDS	78907251	78907529	78907251	ID=cds.MS.gene045361.t1;Parent=MS.gene045361.t1

Gene Sequence	>MS.gene045361 ATGGGTTTTCGCTTACCTGGTATTAGACGATCATCATTTACTGCAGGTCAGTCATCTAGCAAGCAAGTGGAAGTCCCAAAAGGCTATTTGGCGGTGTATGTTGGCGAGGAAATGAAGAGGTTCTTGATTCCAGTAGCATTCTTGAATGAGCCTTTGTTTCAAGAATTGTTGAGCCAAGCTGAAGAGGAATTCGGTTACTGTCATCCAATGGGTGGTCTTACAATTCCGTGCAAGGAAGATTTGTTTTTACAAACAACTTCCCGCTTGAACGGCCTATAA
Protein sequence	>MS.gene045361.t1 MGFRLPGIRRSSFTAGQSSSKQVEVPKGYLAVYVGEEMKRFLIPVAFLNEPLFQELLSQAEEEFGYCHPMGGLTIPCKEDLFLQTTSRLNGL