AlfalfaGEDB | MS.gene014667

M. sativa cultivar XinJiangDaYe / MS.gene014667

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene014667.t1	KEH36014.1	96.7	90	3	0	3	92	62	151	3.80E-43	183.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene014667.t1	P33080	73.9	92	24	0	1	92	1	92	7.3e-35	147.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene014667.t1	G7ZWL3	96.7	90	3	0	3	92	62	151	2.7e-43	183.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene014667	MS.gene057779	PPI
MS.gene014667	MS.gene50673	PPI
MS.gene003582	MS.gene014667	PPI
MS.gene014667	MS.gene50771	PPI
MS.gene014667	MS.gene022358	PPI
MS.gene014667	MS.gene057802	PPI
MS.gene014667	MS.gene057796	PPI
MS.gene014667	MS.gene062954	PPI
MS.gene014667	MS.gene50682	PPI
MS.gene50772	MS.gene014667	PPI
MS.gene014667	MS.gene003597	PPI
MS.gene057809	MS.gene014667	PPI
MS.gene014667	MS.gene062986	PPI
MS.gene014667	MS.gene057806	PPI
MS.gene062978	MS.gene014667	PPI
MS.gene014667	MS.gene057780	PPI
MS.gene014667	MS.gene057788	PPI
MS.gene014667	MS.gene062944	PPI
MS.gene014667	MS.gene50658	PPI
MS.gene014667	MS.gene50655	PPI
MS.gene014667	MS.gene28863	PPI
MS.gene014667	MS.gene50685	PPI
MS.gene014667	MS.gene003584	PPI
MS.gene014667	MS.gene057791	PPI
MS.gene014667	MS.gene50674	PPI
MS.gene003593	MS.gene014667	PPI
MS.gene014667	MS.gene50651	PPI
MS.gene014667	MS.gene057782	PPI
MS.gene003580	MS.gene014667	PPI
MS.gene014667	MS.gene062969	PPI
MS.gene014667	MS.gene062965	PPI
MS.gene014667	MS.gene057784	PPI
MS.gene014667	MS.gene062953	PPI
MS.gene057816	MS.gene014667	PPI
MS.gene014667	MS.gene23369	PPI
MS.gene014667	MS.gene057783	PPI
MS.gene014667	MS.gene50770	PPI
MS.gene014667	MS.gene062987	PPI
MS.gene014667	MS.gene057811	PPI
MS.gene014667	MS.gene057817	PPI
MS.gene014667	MS.gene70684	PPI
MS.gene014667	MS.gene062964	PPI
MS.gene014667	MS.gene003612	PPI
MS.gene014667	MS.gene77525	PPI
MS.gene50657	MS.gene014667	PPI
MS.gene014667	MS.gene057777	PPI
MS.gene014667	MS.gene062945	PPI
MS.gene014667	MS.gene062967	PPI
MS.gene014667	MS.gene057804	PPI
MS.gene014667	MS.gene003579	PPI
MS.gene50683	MS.gene014667	PPI
MS.gene014667	MS.gene062989	PPI
MS.gene057807	MS.gene014667	PPI
MS.gene014667	MS.gene003607	PPI
MS.gene014667	MS.gene50656	PPI
MS.gene014667	MS.gene003606	PPI
MS.gene014667	MS.gene50686	PPI
MS.gene014667	MS.gene70683	PPI
MS.gene014667	MS.gene062962	PPI
MS.gene014667	MS.gene062985	PPI
MS.gene003626	MS.gene014667	PPI
MS.gene014667	MS.gene50669	PPI
MS.gene014667	MS.gene70685	PPI
MS.gene014667	MS.gene003622	PPI
MS.gene062946	MS.gene014667	PPI
MS.gene057805	MS.gene014667	PPI
MS.gene014667	MS.gene003599	PPI
MS.gene003605	MS.gene014667	PPI
MS.gene014667	MS.gene23368	PPI
MS.gene014667	MS.gene50662	PPI
MS.gene014667	MS.gene003585	PPI
MS.gene014667	MS.gene50660	PPI
MS.gene014667	MS.gene003623	PPI
MS.gene014667	MS.gene50668	PPI
MS.gene014667	MS.gene003581	PPI
MS.gene062971	MS.gene014667	PPI
MS.gene23373	MS.gene014667	PPI
MS.gene014667	MS.gene062958	PPI
MS.gene014667	MS.gene50666	PPI
MS.gene014667	MS.gene003628	PPI
MS.gene014667	MS.gene057798	PPI
MS.gene014667	MS.gene057794	PPI
MS.gene014667	MS.gene003629	PPI
MS.gene014667	MS.gene062983	PPI
MS.gene014667	MS.gene062966	PPI
MS.gene062975	MS.gene014667	PPI
MS.gene014667	MS.gene062980	PPI
MS.gene014667	MS.gene23367	PPI
MS.gene014667	MS.gene062940	PPI
MS.gene014667	MS.gene003610	PPI
MS.gene50689	MS.gene014667	PPI
MS.gene014667	MS.gene003595	PPI
MS.gene014667	MS.gene062959	PPI
MS.gene003576	MS.gene014667	PPI
MS.gene014667	MS.gene50664	PPI
MS.gene014667	MS.gene057785	PPI
MS.gene014667	MS.gene50773	PPI
MS.gene014667	MS.gene50670	PPI
MS.gene014667	MS.gene057800	PPI
MS.gene014667	MS.gene50653	PPI
MS.gene014667	MS.gene003598	PPI
MS.gene014667	MS.gene50690	PPI
MS.gene062970	MS.gene014667	PPI
MS.gene014667	MS.gene062941	PPI
MS.gene062942	MS.gene014667	PPI
MS.gene014667	MS.gene003613	PPI
MS.gene014667	MS.gene057799	PPI
MS.gene014667	MS.gene50688	PPI
MS.gene062972	MS.gene014667	PPI
MS.gene014667	MS.gene003603	PPI
MS.gene014667	MS.gene003630	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene014667.t1	MTR_3g084250	83.696	92	15	0	1	92	1	92	3.75e-54	163
MS.gene014667.t1	MTR_3g110045	96.667	90	3	0	3	92	62	151	7.25e-54	164
MS.gene014667.t1	MTR_8g461420	88.043	92	11	0	1	92	1	92	4.45e-51	155
MS.gene014667.t1	MTR_3g084230	88.043	92	11	0	1	92	1	92	3.17e-50	153
MS.gene014667.t1	MTR_3g084190	86.957	92	12	0	1	92	1	92	4.51e-50	153
MS.gene014667.t1	MTR_3g084210	86.957	92	12	0	1	92	1	92	2.91e-49	151
MS.gene014667.t1	MTR_3g084160	83.696	92	15	0	1	92	1	92	2.45e-47	146
MS.gene014667.t1	MTR_3g084180	71.739	92	26	0	1	92	1	92	2.93e-47	145
MS.gene014667.t1	MTR_3g084150	70.652	92	27	0	1	92	1	92	2.63e-46	143
MS.gene014667.t1	MTR_8g461410	69.565	92	28	0	1	92	1	92	1.96e-45	141
MS.gene014667.t1	MTR_4g072500	71.739	92	26	0	1	92	1	92	8.70e-45	139
MS.gene014667.t1	MTR_3g110042	73.034	89	24	0	1	89	1	89	2.37e-44	139
MS.gene014667.t1	MTR_4g072310	69.892	93	27	1	1	92	1	93	1.23e-43	137
MS.gene014667.t1	MTR_3g084170	73.118	93	23	2	1	92	1	92	1.25e-43	137
MS.gene014667.t1	MTR_4g072530	71.111	90	26	0	1	90	1	90	1.69e-43	136
MS.gene014667.t1	MTR_3g117630	69.565	92	28	0	1	92	1	92	2.55e-43	136
MS.gene014667.t1	MTR_4g050700	72.043	93	25	1	1	92	1	93	8.99e-43	134
MS.gene014667.t1	MTR_2g012410	72.043	93	25	1	1	92	1	93	8.99e-43	134
MS.gene014667.t1	MTR_3g084240	72.043	93	24	2	1	92	1	92	9.84e-43	134
MS.gene014667.t1	MTR_4g072880	68.132	91	28	1	1	90	1	91	1.07e-42	134
MS.gene014667.t1	MTR_4g072640	70.000	90	27	0	1	90	1	90	1.84e-42	134
MS.gene014667.t1	MTR_4g072870	68.132	91	28	1	1	90	1	91	3.76e-42	133
MS.gene014667.t1	MTR_4g072270	68.817	93	28	1	1	92	1	93	6.84e-42	132
MS.gene014667.t1	MTR_4g072820	75.824	91	15	2	1	90	1	85	7.32e-42	132
MS.gene014667.t1	MTR_3g110032	67.742	93	29	1	1	92	1	93	7.72e-42	132
MS.gene014667.t1	MTR_4g072480	67.391	92	30	0	1	92	1	92	8.83e-42	132
MS.gene014667.t1	MTR_4g072460	66.304	92	31	0	1	92	1	92	1.69e-41	131
MS.gene014667.t1	MTR_4g072230	68.817	93	26	2	1	92	1	91	2.46e-41	130
MS.gene014667.t1	MTR_3g084220	69.892	93	26	2	1	92	1	92	2.62e-41	130
MS.gene014667.t1	MTR_4g072570	67.391	92	30	0	1	92	1	92	3.63e-41	130
MS.gene014667.t1	MTR_4g072610	70.330	91	21	1	1	91	1	85	3.75e-41	130
MS.gene014667.t1	MTR_4g072370	70.000	90	25	1	1	90	1	88	4.81e-41	130
MS.gene014667.t1	MTR_4g072680	66.304	92	31	0	1	92	1	92	5.11e-41	130
MS.gene014667.t1	MTR_4g072250	71.429	91	24	2	1	90	1	90	7.10e-41	130
MS.gene014667.t1	MTR_4g072490	70.000	90	22	1	1	90	1	85	7.35e-41	129
MS.gene014667.t1	MTR_4g072830	67.391	92	28	1	1	92	1	90	2.16e-40	128
MS.gene014667.t1	MTR_4g072620	65.217	92	32	0	1	92	1	92	3.22e-40	128
MS.gene014667.t1	MTR_4g072240	65.934	91	30	1	1	90	1	91	3.27e-40	128
MS.gene014667.t1	MTR_3g110038	67.742	93	28	2	1	92	1	92	3.33e-40	128
MS.gene014667.t1	MTR_4g072860	66.667	93	30	1	1	92	1	93	6.27e-40	127
MS.gene014667.t1	MTR_4g072650	69.231	91	22	1	1	91	1	85	6.43e-40	127
MS.gene014667.t1	MTR_4g072730	65.556	90	31	0	1	90	1	90	1.18e-39	127
MS.gene014667.t1	MTR_4g072630	70.000	90	23	1	1	90	1	86	1.48e-39	126
MS.gene014667.t1	MTR_4g072580	68.132	91	24	1	1	91	1	86	2.52e-39	125
MS.gene014667.t1	MTR_3g084260	67.033	91	29	1	1	90	1	91	2.73e-39	125
MS.gene014667.t1	MTR_4g072330	64.444	90	30	1	1	90	1	88	2.82e-39	125
MS.gene014667.t1	MTR_4g072600	69.231	91	23	1	1	91	1	86	5.09e-39	125
MS.gene014667.t1	MTR_4g072220	64.516	93	32	1	1	92	1	93	7.40e-39	124
MS.gene014667.t1	MTR_4g072300	63.736	91	32	1	1	90	1	91	1.32e-38	124
MS.gene014667.t1	MTR_4g072740	68.889	90	23	1	1	90	1	85	1.47e-38	124
MS.gene014667.t1	MTR_4g072540	72.222	90	21	1	1	90	1	86	2.89e-38	123
MS.gene014667.t1	MTR_4g072890	63.736	91	32	1	1	90	1	91	4.36e-38	122
MS.gene014667.t1	MTR_4g072260	62.366	93	34	1	1	92	1	93	5.15e-38	122
MS.gene014667.t1	MTR_4g072465	66.667	90	26	1	1	90	1	86	8.76e-38	122
MS.gene014667.t1	MTR_4g072850	69.149	94	27	1	1	92	1	94	1.29e-37	121
MS.gene014667.t1	MTR_4g072470	66.667	90	25	1	1	90	1	85	3.28e-36	117
MS.gene014667.t1	MTR_4g072720	77.143	70	16	0	21	90	17	86	1.02e-35	116
MS.gene014667.t1	MTR_4g072380	69.231	91	22	2	1	90	1	86	1.23e-35	116
MS.gene014667.t1	MTR_4g072510	66.667	90	26	1	1	90	1	86	8.03e-35	114
MS.gene014667.t1	MTR_4g072670	66.667	90	26	1	1	90	1	86	1.73e-34	113
MS.gene014667.t1	MTR_4g072590	66.667	90	25	1	1	90	1	85	5.74e-34	112
MS.gene014667.t1	MTR_4g072940	67.391	92	28	1	3	92	33	124	5.89e-34	113
MS.gene014667.t1	MTR_4g072660	61.628	86	33	0	7	92	2	87	6.42e-34	112
MS.gene014667.t1	MTR_5g008360	67.089	79	26	0	14	92	5	83	1.62e-33	110
MS.gene014667.t1	MTR_5g008370	65.854	82	24	1	9	90	13	90	9.80e-32	108
MS.gene014667.t1	MTR_4g072450	64.444	90	27	1	1	90	1	85	1.57e-31	106
MS.gene014667.t1	MTR_4g072690	64.444	90	27	1	1	90	1	85	2.52e-31	105
MS.gene014667.t1	MTR_4g072770	58.889	90	27	2	1	90	1	80	4.95e-31	104
MS.gene014667.t1	MTR_3g110035	74.242	66	17	0	27	92	73	138	4.56e-30	103
MS.gene014667.t1	MTR_4g072550	64.384	73	26	0	20	92	31	103	5.22e-30	102
MS.gene014667.t1	MTR_3g084200	68.493	73	21	2	1	72	1	72	6.27e-30	102
MS.gene014667.t1	MTR_4g072980	54.348	92	39	2	1	89	1	92	7.19e-30	102
MS.gene014667.t1	MTR_5g008350	63.291	79	24	1	1	79	1	74	1.35e-29	100
MS.gene014667.t1	MTR_4g072910	65.672	67	23	0	24	90	34	100	1.52e-28	99.0
MS.gene014667.t1	MTR_4g072280	61.333	75	28	1	1	74	1	75	2.09e-28	98.2
MS.gene014667.t1	MTR_4g072560	50.515	97	40	3	1	89	1	97	2.65e-28	98.6
MS.gene014667.t1	MTR_4g072750	61.250	80	29	1	1	78	1	80	1.20e-27	96.3
MS.gene014667.t1	MTR_4g072290	54.839	93	27	2	1	92	1	79	2.17e-27	95.5
MS.gene014667.t1	MTR_3g117640	61.765	68	25	1	24	90	33	100	3.09e-25	90.9
MS.gene014667.t1	MTR_6g077850	50.000	70	35	0	22	91	31	100	7.22e-23	84.7
MS.gene014667.t1	MTR_8g461400	51.613	93	17	3	1	92	1	66	4.88e-22	81.6
MS.gene014667.t1	MTR_3g117610	61.667	60	22	1	23	82	43	101	2.95e-21	80.9
MS.gene014667.t1	MTR_3g113310	57.377	61	25	1	22	82	39	98	7.05e-21	79.7
MS.gene014667.t1	MTR_4g072930	46.914	81	37	2	16	90	30	110	1.38e-20	79.3
MS.gene014667.t1	MTR_5g021820	48.837	86	39	3	9	91	21	104	7.86e-20	77.0
MS.gene014667.t1	MTR_4g072190	52.113	71	33	1	19	89	30	99	8.16e-20	77.0
MS.gene014667.t1	MTR_4g072840	50.549	91	13	3	1	90	1	60	2.81e-19	74.3
MS.gene014667.t1	MTR_8g076040	49.351	77	35	2	9	82	22	97	2.82e-18	73.2
MS.gene014667.t1	MTR_4g025830	50.000	68	30	2	25	89	79	145	1.64e-17	72.8
MS.gene014667.t1	MTR_1g094750	48.148	81	38	2	7	84	29	108	7.63e-17	69.7
MS.gene014667.t1	MTR_4g124750	55.932	59	25	1	24	82	68	125	1.04e-16	70.5
MS.gene014667.t1	MTR_2g043960	51.471	68	32	1	15	82	66	132	5.55e-16	68.9
MS.gene014667.t1	MTR_8g461210	46.667	75	39	1	8	82	18	91	1.23e-15	66.6
MS.gene014667.t1	MTR_1g063950	47.143	70	36	1	14	83	37	105	1.86e-15	66.6
MS.gene014667.t1	MTR_1g024085	45.455	77	39	2	8	82	18	93	2.97e-15	66.6
MS.gene014667.t1	MTR_4g072160	53.571	56	25	1	24	79	36	90	3.00e-15	66.2
MS.gene014667.t1	MTR_7g101740	51.562	64	30	1	24	87	39	101	3.74e-15	65.5
MS.gene014667.t1	MTR_1g009150	51.471	68	32	1	15	82	61	127	7.17e-15	66.2
MS.gene014667.t1	MTR_0388s0020	47.222	72	33	3	10	78	61	130	9.36e-15	65.5
MS.gene014667.t1	MTR_4g005310	50.000	64	29	2	21	82	58	120	5.96e-14	63.2
MS.gene014667.t1	MTR_7g118010	44.928	69	35	2	25	91	23	90	6.56e-14	62.0
MS.gene014667.t1	MTR_1g061570	50.847	59	28	1	24	82	18	75	2.71e-13	60.8
MS.gene014667.t1	MTR_3g092220	41.667	84	43	4	1	82	12	91	2.93e-13	60.5
MS.gene014667.t1	MTR_4g005320	51.724	58	27	1	25	82	70	126	3.80e-13	61.6
MS.gene014667.t1	MTR_8g026730	42.029	69	37	2	25	91	27	94	1.43e-12	58.5
MS.gene014667.t1	MTR_3g097120	40.000	80	39	2	20	91	4	82	3.99e-12	57.4
MS.gene014667.t1	MTR_7g405740	40.244	82	42	3	6	82	44	123	4.46e-12	58.5
MS.gene014667.t1	MTR_8g096470	40.909	66	38	1	26	91	47	111	4.76e-12	57.4
MS.gene014667.t1	MTR_3g109160	53.448	58	26	1	25	82	69	125	1.14e-11	57.8
MS.gene014667.t1	MTR_3g105900	66.667	36	12	0	24	59	1171	1206	4.99e-11	57.8
MS.gene014667.t1	MTR_2g066830	43.103	58	32	1	25	82	58	114	5.73e-11	55.5
MS.gene014667.t1	MTR_3g098970	34.286	70	45	1	23	92	51	119	6.42e-11	55.5
MS.gene014667.t1	MTR_8g096500	44.828	58	31	1	25	82	49	105	8.48e-11	55.1
MS.gene014667.t1	MTR_7g101890	41.538	65	35	2	16	78	43	106	9.89e-11	54.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene014667.t1	AT4G38840	66.176	68	22	1	24	90	32	99	1.12e-29	102
MS.gene014667.t1	AT2G21200	63.889	72	25	1	19	89	15	86	2.68e-29	100
MS.gene014667.t1	AT5G18020	58.442	77	31	1	16	91	15	91	4.62e-29	100
MS.gene014667.t1	AT5G18010	59.211	76	30	1	16	90	15	90	2.92e-28	98.2
MS.gene014667.t1	AT5G18050	59.211	76	30	1	16	90	15	90	3.26e-28	97.8
MS.gene014667.t1	AT5G18060	60.526	76	29	1	16	90	15	90	6.22e-28	97.4
MS.gene014667.t1	AT5G18080	59.211	76	30	1	16	90	15	90	6.57e-28	97.1
MS.gene014667.t1	AT3G03820	61.333	75	26	1	19	90	21	95	7.21e-28	97.4
MS.gene014667.t1	AT2G21210	59.459	74	28	1	19	90	22	95	1.57e-27	96.7
MS.gene014667.t1	AT5G18030	60.811	74	28	1	18	90	15	88	2.79e-27	95.5
MS.gene014667.t1	AT4G34800	57.333	75	29	1	12	83	8	82	5.22e-27	95.1
MS.gene014667.t1	AT4G38825	57.333	75	31	1	17	90	15	89	5.90e-27	94.7
MS.gene014667.t1	AT2G21210	59.459	74	28	1	19	90	89	162	6.01e-27	97.1
MS.gene014667.t1	AT3G03840	52.174	92	31	2	1	90	14	94	6.32e-27	94.7
MS.gene014667.t1	AT4G38850	54.118	85	35	2	10	90	5	89	6.80e-27	94.7
MS.gene014667.t1	AT4G34810	66.667	63	17	1	25	83	48	110	2.52e-26	94.0
MS.gene014667.t1	AT4G34770	50.980	102	38	2	1	90	1	102	2.74e-26	93.6
MS.gene014667.t1	AT3G03850	62.687	67	23	1	26	90	26	92	4.51e-25	90.1
MS.gene014667.t1	AT4G34790	64.516	62	20	1	25	84	39	100	1.14e-23	87.0
MS.gene014667.t1	AT3G03830	50.000	88	37	2	10	90	5	92	6.22e-23	84.7
MS.gene014667.t1	AT4G13790	48.810	84	35	2	8	89	14	91	1.44e-22	83.6
MS.gene014667.t1	AT4G38860	50.588	85	39	1	9	90	21	105	1.96e-22	84.0
MS.gene014667.t1	AT4G34780	55.556	72	29	1	23	91	26	97	7.39e-22	82.4
MS.gene014667.t1	AT2G21220	48.810	84	39	2	9	89	21	103	1.10e-20	79.3
MS.gene014667.t1	AT1G75580	48.193	83	42	1	7	89	26	107	3.35e-20	78.2
MS.gene014667.t1	AT4G34760	58.333	60	24	1	23	82	41	99	9.69e-19	74.3
MS.gene014667.t1	AT3G43120	50.725	69	33	1	14	82	68	135	2.61e-17	72.0
MS.gene014667.t1	AT1G19830	56.667	60	25	1	23	82	46	104	3.63e-17	70.9
MS.gene014667.t1	AT5G66260	47.500	80	38	2	14	90	20	98	1.11e-16	68.9
MS.gene014667.t1	AT4G36110	55.932	59	25	1	24	82	39	96	2.41e-16	68.2
MS.gene014667.t1	AT2G37030	51.613	62	29	1	24	85	48	108	8.20e-16	67.4
MS.gene014667.t1	AT2G45210	55.357	56	21	2	25	77	79	133	1.22e-15	67.8
MS.gene014667.t1	AT5G20810	53.030	66	30	1	17	82	71	135	1.92e-15	67.4
MS.gene014667.t1	AT5G20810	53.030	66	30	1	17	82	71	135	2.01e-15	67.8
MS.gene014667.t1	AT2G18010	54.237	59	26	1	24	82	47	104	2.29e-15	65.9
MS.gene014667.t1	AT3G51200	50.769	65	30	2	20	83	34	97	2.41e-15	65.9
MS.gene014667.t1	AT1G75590	45.205	73	39	1	10	82	27	98	2.42e-15	67.0
MS.gene014667.t1	AT2G16580	49.254	67	33	1	23	89	42	107	2.47e-15	65.9
MS.gene014667.t1	AT3G20220	45.714	70	36	2	14	82	36	104	1.01e-14	64.3
MS.gene014667.t1	AT5G10990	44.118	68	37	1	24	91	40	106	1.54e-14	64.7
MS.gene014667.t1	AT3G61900	45.070	71	35	2	24	91	29	98	1.69e-14	64.3
MS.gene014667.t1	AT3G60690	47.059	68	32	2	25	89	88	154	5.04e-14	63.9
MS.gene014667.t1	AT4G34750	45.763	59	31	1	24	82	36	93	8.47e-14	62.8
MS.gene014667.t1	AT4G34750	45.763	59	31	1	24	82	36	93	8.47e-14	62.8
MS.gene014667.t1	AT3G53250	44.444	63	31	1	24	86	51	109	9.65e-14	62.0
MS.gene014667.t1	AT1G19840	50.847	59	28	1	24	82	40	97	9.79e-14	62.8
MS.gene014667.t1	AT3G53250	44.444	63	31	1	24	86	82	140	1.59e-13	62.4
MS.gene014667.t1	AT4G00880	39.560	91	45	3	3	91	13	95	2.31e-13	61.2
MS.gene014667.t1	AT5G53590	46.269	67	30	2	24	85	45	110	2.70e-12	58.9
MS.gene014667.t1	AT4G09530	40.000	85	44	4	1	82	8	88	3.54e-12	57.8
MS.gene014667.t1	AT2G46690	40.541	74	40	2	17	87	16	88	3.62e-12	58.2
MS.gene014667.t1	AT1G56150	48.276	58	29	1	25	82	38	94	3.89e-12	57.8
MS.gene014667.t1	AT3G12830	40.741	81	43	3	6	82	27	106	4.80e-12	57.8
MS.gene014667.t1	AT1G16510	46.552	58	30	1	25	82	54	110	5.83e-12	58.2
MS.gene014667.t1	AT4G31320	51.724	58	27	1	25	82	80	136	1.98e-11	57.4
MS.gene014667.t1	AT2G24400	53.448	58	26	1	25	82	64	120	2.33e-11	57.0
MS.gene014667.t1	AT3G09870	50.877	57	25	2	24	78	44	99	6.03e-11	54.7
MS.gene014667.t1	AT4G12410	40.000	80	43	3	6	82	58	135	8.29e-11	55.1

Find 19 sgRNAs with CRISPR-Local

Find 19 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTAAGCAATTCTTGAAATAA+AGG	0.274282	3.1:-87608626	None:intergenic
AGCCAAGCTGAAGAGGAATT+TGG	0.280427	3.1:+87608647	MS.gene014667:CDS
GGCTCATTCAATAATGATAA+TGG	0.309882	3.1:-87608605	None:intergenic
TAAGAAGACATCTTCCTTGC+AGG	0.333534	3.1:-87608702	None:intergenic
TACACTGCAAGATAGCCTTT+TGG	0.387226	3.1:-87608551	None:intergenic
GGCTATCTTGCAGTGTATGT+TGG	0.504521	3.1:+87608557	MS.gene014667:CDS
AGCCAAATTCCTCTTCAGCT+TGG	0.523314	3.1:-87608649	None:intergenic
ATTGCTTAGCCAAGCTGAAG+AGG	0.528923	3.1:+87608640	MS.gene014667:CDS
TCAATCATCTAGCAAAGAAG+TGG	0.537327	3.1:+87608523	MS.gene014667:CDS
AGAATGGGGTTTCACTTACC+TGG	0.541398	3.1:+87608473	None:intergenic
ATTTGGCTACTGTCATCCAA+TGG	0.543018	3.1:+87608664	MS.gene014667:CDS
TTTGGCTACTGTCATCCAAT+GGG	0.543330	3.1:+87608665	MS.gene014667:CDS
AAAGAAGTGGAAGTCCCAAA+AGG	0.565958	3.1:+87608536	MS.gene014667:CDS
GGCTACTGTCATCCAATGGG+TGG	0.581722	3.1:+87608668	MS.gene014667:CDS
AAGAAGACATCTTCCTTGCA+GGG	0.589901	3.1:-87608701	None:intergenic
TGGTCTTACAATTCCCTGCA+AGG	0.603321	3.1:+87608688	MS.gene014667:CDS
GGAATTGTAAGACCACCCAT+TGG	0.609754	3.1:-87608680	None:intergenic
AATGTTGATCTTCTAATACC+AGG	0.631567	3.1:-87608491	None:intergenic
ATGTTGGAGAGAAAATGAAG+AGG	0.722595	3.1:+87608573	MS.gene014667:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CTAAGCAATTCTTGAAATAA+AGG	-	chr3.1:87608629-87608648	None:intergenic	25.0%
	AATGTTGATCTTCTAATACC+AGG	-	chr3.1:87608494-87608513	None:intergenic	30.0%
	GGCTCATTCAATAATGATAA+TGG	-	chr3.1:87608608-87608627	None:intergenic	30.0%
	ATGTTGGAGAGAAAATGAAG+AGG	+	chr3.1:87608573-87608592	MS.gene014667:CDS	35.0%
	TCAATCATCTAGCAAAGAAG+TGG	+	chr3.1:87608523-87608542	MS.gene014667:CDS	35.0%
	AAAGAAGTGGAAGTCCCAAA+AGG	+	chr3.1:87608536-87608555	MS.gene014667:CDS	40.0%
	AAGAAGACATCTTCCTTGCA+GGG	-	chr3.1:87608704-87608723	None:intergenic	40.0%
	ATTTGGCTACTGTCATCCAA+TGG	+	chr3.1:87608664-87608683	MS.gene014667:CDS	40.0%
	TAAGAAGACATCTTCCTTGC+AGG	-	chr3.1:87608705-87608724	None:intergenic	40.0%
	TTTGGCTACTGTCATCCAAT+GGG	+	chr3.1:87608665-87608684	MS.gene014667:CDS	40.0%
!	ACACTGCAAGATAGCCTTTT+GGG	-	chr3.1:87608553-87608572	None:intergenic	40.0%
!	TACACTGCAAGATAGCCTTT+TGG	-	chr3.1:87608554-87608573	None:intergenic	40.0%
	AGCCAAATTCCTCTTCAGCT+TGG	-	chr3.1:87608652-87608671	None:intergenic	45.0%
	AGCCAAGCTGAAGAGGAATT+TGG	+	chr3.1:87608647-87608666	MS.gene014667:CDS	45.0%
	ATTGCTTAGCCAAGCTGAAG+AGG	+	chr3.1:87608640-87608659	MS.gene014667:CDS	45.0%
	GGAATTGTAAGACCACCCAT+TGG	-	chr3.1:87608683-87608702	None:intergenic	45.0%
	GGCTATCTTGCAGTGTATGT+TGG	+	chr3.1:87608557-87608576	MS.gene014667:CDS	45.0%
!	TGGTCTTACAATTCCCTGCA+AGG	+	chr3.1:87608688-87608707	MS.gene014667:CDS	45.0%
	GGCTACTGTCATCCAATGGG+TGG	+	chr3.1:87608668-87608687	MS.gene014667:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	87608476	87608754	87608476	ID=MS.gene014667
chr3.1	mRNA	87608476	87608754	87608476	ID=MS.gene014667.t1;Parent=MS.gene014667
chr3.1	exon	87608476	87608754	87608476	ID=MS.gene014667.t1.exon1;Parent=MS.gene014667.t1
chr3.1	CDS	87608476	87608754	87608476	ID=cds.MS.gene014667.t1;Parent=MS.gene014667.t1

Gene Sequence	>MS.gene014667 ATGGGGTTTCACTTACCTGGTATTAGAAGATCAACATTTAGTGCAAGTCAATCATCTAGCAAAGAAGTGGAAGTCCCAAAAGGCTATCTTGCAGTGTATGTTGGAGAGAAAATGAAGAGGTTCTTGATTCCATTATCATTATTGAATGAGCCTTTATTTCAAGAATTGCTTAGCCAAGCTGAAGAGGAATTTGGCTACTGTCATCCAATGGGTGGTCTTACAATTCCCTGCAAGGAAGATGTCTTCTTACATACAGCTTCTCACTTGAACAGACTATAA
Protein sequence	>MS.gene014667.t1 MGFHLPGIRRSTFSASQSSSKEVEVPKGYLAVYVGEKMKRFLIPLSLLNEPLFQELLSQAEEEFGYCHPMGGLTIPCKEDVFLHTASHLNRL