AlfalfaGEDB | MS.gene003591

M. sativa cultivar XinJiangDaYe / MS.gene003591

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003591.t1	AES89341.1	94.2	86	5	0	1	86	1	86	3.40E-38	167.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003591.t1	P33080	68.9	90	24	1	1	86	1	90	1.7e-30	132.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003591.t1	G7JM98	94.2	86	5	0	1	86	1	86	2.5e-38	167.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene003591	MS.gene062964	PPI
MS.gene003591	MS.gene77525	PPI
MS.gene003591	MS.gene50658	PPI
MS.gene003591	MS.gene057777	PPI
MS.gene003591	MS.gene28863	PPI
MS.gene003591	MS.gene062945	PPI
MS.gene062972	MS.gene003591	PPI
MS.gene003591	MS.gene057804	PPI
MS.gene003591	MS.gene50651	PPI
MS.gene003580	MS.gene003591	PPI
MS.gene003591	MS.gene003607	PPI
MS.gene003582	MS.gene003591	PPI
MS.gene003591	MS.gene50656	PPI
MS.gene003591	MS.gene062969	PPI
MS.gene003591	MS.gene50686	PPI
MS.gene003591	MS.gene70683	PPI
MS.gene003591	MS.gene062962	PPI
MS.gene003591	MS.gene50666	PPI
MS.gene003591	MS.gene062985	PPI
MS.gene003591	MS.gene057784	PPI
MS.gene003591	MS.gene50669	PPI
MS.gene50772	MS.gene003591	PPI
MS.gene003591	MS.gene003622	PPI
MS.gene057809	MS.gene003591	PPI
MS.gene003591	MS.gene003599	PPI
MS.gene003591	MS.gene23368	PPI
MS.gene062978	MS.gene003591	PPI
MS.gene003591	MS.gene003585	PPI
MS.gene003591	MS.gene003623	PPI
MS.gene003591	MS.gene50668	PPI
MS.gene003591	MS.gene003581	PPI
MS.gene003591	MS.gene70684	PPI
MS.gene003591	MS.gene062958	PPI
MS.gene003591	MS.gene003628	PPI
MS.gene003591	MS.gene057798	PPI
MS.gene003591	MS.gene003612	PPI
MS.gene003591	MS.gene003629	PPI
MS.gene003591	MS.gene062983	PPI
MS.gene003593	MS.gene003591	PPI
MS.gene003591	MS.gene062967	PPI
MS.gene003591	MS.gene003579	PPI
MS.gene057807	MS.gene003591	PPI
MS.gene003591	MS.gene062940	PPI
MS.gene003591	MS.gene062989	PPI
MS.gene003591	MS.gene003595	PPI
MS.gene003591	MS.gene062959	PPI
MS.gene003591	MS.gene003606	PPI
MS.gene003591	MS.gene50664	PPI
MS.gene003591	MS.gene057785	PPI
MS.gene003591	MS.gene50670	PPI
MS.gene003591	MS.gene057800	PPI
MS.gene057816	MS.gene003591	PPI
MS.gene003591	MS.gene003598	PPI
MS.gene003591	MS.gene70685	PPI
MS.gene003591	MS.gene062941	PPI
MS.gene003591	MS.gene50662	PPI
MS.gene003591	MS.gene50660	PPI
MS.gene50657	MS.gene003591	PPI
MS.gene003591	MS.gene057799	PPI
MS.gene003591	MS.gene057794	PPI
MS.gene003591	MS.gene50688	PPI
MS.gene003591	MS.gene003603	PPI
MS.gene003591	MS.gene003630	PPI
MS.gene003591	MS.gene062966	PPI
MS.gene50683	MS.gene003591	PPI
MS.gene003591	MS.gene062980	PPI
MS.gene003591	MS.gene50673	PPI
MS.gene003591	MS.gene23367	PPI
MS.gene003591	MS.gene003610	PPI
MS.gene003591	MS.gene057802	PPI
MS.gene003591	MS.gene50773	PPI
MS.gene003591	MS.gene057796	PPI
MS.gene003591	MS.gene50682	PPI
MS.gene003626	MS.gene003591	PPI
MS.gene003591	MS.gene50653	PPI
MS.gene003591	MS.gene003597	PPI
MS.gene062946	MS.gene003591	PPI
MS.gene003591	MS.gene50690	PPI
MS.gene003591	MS.gene057806	PPI
MS.gene057805	MS.gene003591	PPI
MS.gene003605	MS.gene003591	PPI
MS.gene003591	MS.gene057780	PPI
MS.gene003591	MS.gene057788	PPI
MS.gene003591	MS.gene062944	PPI
MS.gene062971	MS.gene003591	PPI
MS.gene23373	MS.gene003591	PPI
MS.gene003591	MS.gene50655	PPI
MS.gene003591	MS.gene50685	PPI
MS.gene003591	MS.gene003613	PPI
MS.gene003591	MS.gene003584	PPI
MS.gene003591	MS.gene057791	PPI
MS.gene003591	MS.gene50674	PPI
MS.gene062975	MS.gene003591	PPI
MS.gene003591	MS.gene057782	PPI
MS.gene003591	MS.gene057779	PPI
MS.gene50689	MS.gene003591	PPI
MS.gene003576	MS.gene003591	PPI
MS.gene003591	MS.gene062965	PPI
MS.gene003591	MS.gene50771	PPI
MS.gene003591	MS.gene022358	PPI
MS.gene003591	MS.gene062953	PPI
MS.gene003591	MS.gene062954	PPI
MS.gene003591	MS.gene23369	PPI
MS.gene003591	MS.gene062986	PPI
MS.gene003591	MS.gene057783	PPI
MS.gene062970	MS.gene003591	PPI
MS.gene003591	MS.gene50770	PPI
MS.gene003591	MS.gene062987	PPI
MS.gene003591	MS.gene057811	PPI
MS.gene062942	MS.gene003591	PPI
MS.gene003591	MS.gene057817	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003591.t1	MTR_4g072490	90.698	86	7	1	1	86	1	85	1.22e-54	164
MS.gene003591.t1	MTR_4g072630	87.209	86	11	0	1	86	1	86	5.03e-54	162
MS.gene003591.t1	MTR_4g072465	86.047	86	12	0	1	86	1	86	1.28e-53	161
MS.gene003591.t1	MTR_4g072740	88.372	86	9	1	1	86	1	85	1.30e-52	159
MS.gene003591.t1	MTR_4g072720	94.186	86	5	0	1	86	1	86	1.44e-49	151
MS.gene003591.t1	MTR_4g072470	82.558	86	14	1	1	86	1	85	4.69e-49	150
MS.gene003591.t1	MTR_4g072540	90.698	86	8	0	1	86	1	86	4.95e-48	147
MS.gene003591.t1	MTR_4g072510	89.535	86	9	0	1	86	1	86	1.30e-47	146
MS.gene003591.t1	MTR_4g072580	80.233	86	16	1	1	86	1	85	2.27e-47	145
MS.gene003591.t1	MTR_4g072670	87.209	86	11	0	1	86	1	86	2.57e-47	145
MS.gene003591.t1	MTR_4g072370	78.409	88	17	1	1	86	1	88	3.38e-47	145
MS.gene003591.t1	MTR_4g072830	80.682	88	13	2	1	85	1	87	8.23e-46	142
MS.gene003591.t1	MTR_4g072600	76.744	86	19	1	1	86	1	85	1.35e-44	139
MS.gene003591.t1	MTR_3g084150	72.222	90	21	1	1	86	1	90	6.38e-44	137
MS.gene003591.t1	MTR_3g084170	72.527	91	19	2	1	86	1	90	8.68e-44	137
MS.gene003591.t1	MTR_4g072610	75.581	86	19	1	1	86	1	84	1.13e-43	136
MS.gene003591.t1	MTR_4g072330	71.910	89	21	2	1	86	1	88	5.28e-43	135
MS.gene003591.t1	MTR_3g084180	71.111	90	22	1	1	86	1	90	6.32e-43	134
MS.gene003591.t1	MTR_4g072650	75.581	86	19	1	1	86	1	84	6.45e-43	134
MS.gene003591.t1	MTR_3g084240	71.429	91	20	2	1	86	1	90	7.06e-43	134
MS.gene003591.t1	MTR_8g461410	70.000	90	23	1	1	86	1	90	1.14e-42	134
MS.gene003591.t1	MTR_4g072590	81.395	86	15	1	1	86	1	85	4.62e-42	132
MS.gene003591.t1	MTR_4g072870	69.565	92	21	2	1	86	1	91	8.09e-42	132
MS.gene003591.t1	MTR_5g008350	82.667	75	12	1	1	75	1	74	1.76e-41	130
MS.gene003591.t1	MTR_3g084220	69.231	91	22	2	1	86	1	90	2.55e-41	130
MS.gene003591.t1	MTR_4g050700	69.231	91	23	1	1	86	1	91	4.03e-41	130
MS.gene003591.t1	MTR_2g012410	69.231	91	23	1	1	86	1	91	4.03e-41	130
MS.gene003591.t1	MTR_4g072880	71.739	92	19	2	1	86	1	91	6.83e-41	129
MS.gene003591.t1	MTR_4g072690	79.070	86	17	1	1	86	1	85	9.97e-41	129
MS.gene003591.t1	MTR_4g072310	68.132	91	24	1	1	86	1	91	1.16e-40	129
MS.gene003591.t1	MTR_3g110032	69.565	92	21	2	1	86	1	91	1.17e-40	129
MS.gene003591.t1	MTR_4g072380	74.713	87	20	2	1	86	1	86	1.22e-40	129
MS.gene003591.t1	MTR_4g072480	67.778	90	25	1	1	86	1	90	1.32e-40	129
MS.gene003591.t1	MTR_3g110038	68.132	91	23	2	1	86	1	90	1.96e-40	128
MS.gene003591.t1	MTR_4g072450	79.070	86	17	1	1	86	1	85	2.77e-40	127
MS.gene003591.t1	MTR_4g072250	70.330	91	21	2	1	86	1	90	1.15e-39	126
MS.gene003591.t1	MTR_3g110042	68.539	89	24	1	1	85	1	89	2.17e-39	125
MS.gene003591.t1	MTR_4g072620	64.444	90	28	1	1	86	1	90	2.79e-39	125
MS.gene003591.t1	MTR_4g072850	69.565	92	22	1	1	86	1	92	6.67e-39	124
MS.gene003591.t1	MTR_4g072680	65.556	90	27	1	1	86	1	90	7.25e-39	124
MS.gene003591.t1	MTR_4g072820	72.414	87	21	2	1	86	1	85	7.33e-39	124
MS.gene003591.t1	MTR_4g072270	65.934	91	26	1	1	86	1	91	8.42e-39	124
MS.gene003591.t1	MTR_4g072240	63.736	91	28	1	1	86	1	91	1.02e-38	124
MS.gene003591.t1	MTR_4g072730	64.444	90	28	1	1	86	1	90	2.50e-38	123
MS.gene003591.t1	MTR_3g084260	63.736	91	28	1	1	86	1	91	3.83e-38	122
MS.gene003591.t1	MTR_4g072860	68.478	92	22	2	1	86	1	91	4.98e-38	122
MS.gene003591.t1	MTR_4g072570	64.444	90	28	1	1	86	1	90	7.75e-38	122
MS.gene003591.t1	MTR_3g084250	65.556	90	27	1	1	86	1	90	8.01e-38	122
MS.gene003591.t1	MTR_4g072220	62.637	91	29	1	1	86	1	91	9.10e-38	122
MS.gene003591.t1	MTR_4g072890	61.538	91	30	1	1	86	1	91	1.26e-37	121
MS.gene003591.t1	MTR_4g072300	61.538	91	30	1	1	86	1	91	1.45e-37	121
MS.gene003591.t1	MTR_4g072500	65.556	90	27	1	1	86	1	90	1.63e-37	121
MS.gene003591.t1	MTR_3g117630	75.342	73	18	0	14	86	18	90	2.15e-37	120
MS.gene003591.t1	MTR_4g072460	63.333	90	29	1	1	86	1	90	2.35e-37	120
MS.gene003591.t1	MTR_4g072260	62.637	91	29	2	1	86	1	91	6.77e-37	119
MS.gene003591.t1	MTR_4g072230	65.934	91	24	2	1	86	1	89	1.05e-36	119
MS.gene003591.t1	MTR_3g084190	66.667	90	26	1	1	86	1	90	2.06e-36	118
MS.gene003591.t1	MTR_4g072530	63.333	90	29	1	1	86	1	90	2.42e-36	118
MS.gene003591.t1	MTR_4g072660	62.791	86	31	1	1	86	1	85	5.10e-36	117
MS.gene003591.t1	MTR_4g072640	63.736	91	27	2	1	86	1	90	5.23e-36	117
MS.gene003591.t1	MTR_3g084210	63.333	90	29	1	1	86	1	90	5.64e-36	117
MS.gene003591.t1	MTR_8g461420	65.556	90	27	1	1	86	1	90	5.77e-36	117
MS.gene003591.t1	MTR_3g084230	64.444	90	28	1	1	86	1	90	2.92e-35	115
MS.gene003591.t1	MTR_3g084160	65.556	90	27	1	1	86	1	90	3.97e-35	115
MS.gene003591.t1	MTR_3g110045	65.909	88	26	1	3	86	62	149	4.47e-35	117
MS.gene003591.t1	MTR_5g008370	64.444	90	28	1	1	86	1	90	1.65e-34	115
MS.gene003591.t1	MTR_5g008360	65.385	78	27	0	9	86	4	81	1.77e-34	113
MS.gene003591.t1	MTR_4g072940	66.667	90	24	1	3	86	33	122	7.92e-34	112
MS.gene003591.t1	MTR_4g072560	53.535	99	30	3	1	85	1	97	1.81e-31	106
MS.gene003591.t1	MTR_3g084200	69.863	73	16	2	1	68	1	72	1.18e-30	104
MS.gene003591.t1	MTR_4g072770	60.465	86	28	1	1	86	1	80	1.38e-30	103
MS.gene003591.t1	MTR_4g072980	53.261	92	36	2	1	85	1	92	4.51e-30	102
MS.gene003591.t1	MTR_4g072550	61.728	81	26	1	11	86	21	101	2.86e-29	100
MS.gene003591.t1	MTR_4g072910	61.111	72	28	0	15	86	29	100	1.24e-28	99.0
MS.gene003591.t1	MTR_3g117640	60.294	68	26	1	20	86	33	100	3.67e-27	95.5
MS.gene003591.t1	MTR_4g072290	56.977	86	28	2	1	86	1	77	1.18e-26	93.2
MS.gene003591.t1	MTR_3g110035	57.746	71	30	0	16	86	66	136	2.78e-25	91.7
MS.gene003591.t1	MTR_4g072750	72.222	54	15	0	14	67	20	73	1.17e-23	85.9
MS.gene003591.t1	MTR_4g072280	58.667	75	26	2	1	70	1	75	3.80e-23	84.3
MS.gene003591.t1	MTR_6g077850	50.746	67	33	0	20	86	33	99	7.47e-22	82.0
MS.gene003591.t1	MTR_3g117610	53.846	65	29	1	19	83	43	106	2.25e-21	80.9
MS.gene003591.t1	MTR_3g113310	50.746	67	32	1	19	85	40	105	2.61e-21	80.5
MS.gene003591.t1	MTR_4g072190	47.887	71	36	1	13	83	28	97	1.81e-20	78.2
MS.gene003591.t1	MTR_4g072930	50.725	69	30	1	22	86	42	110	5.45e-20	77.4
MS.gene003591.t1	MTR_4g072840	49.425	87	16	3	1	86	1	60	6.21e-19	73.2
MS.gene003591.t1	MTR_8g461400	46.154	91	17	3	1	86	1	64	1.19e-18	72.8
MS.gene003591.t1	MTR_5g021820	50.000	66	32	1	20	85	39	103	3.91e-18	72.4
MS.gene003591.t1	MTR_8g076040	51.562	64	30	1	20	83	40	102	1.93e-17	70.9
MS.gene003591.t1	MTR_2g043960	55.932	59	25	1	20	78	75	132	2.55e-17	72.0
MS.gene003591.t1	MTR_1g009150	53.623	69	31	1	13	81	63	130	3.31e-17	72.0
MS.gene003591.t1	MTR_4g124750	54.237	59	26	1	20	78	68	125	6.96e-17	70.5
MS.gene003591.t1	MTR_1g094750	53.226	62	28	1	20	81	49	109	9.04e-16	67.0
MS.gene003591.t1	MTR_4g005310	48.387	62	31	1	21	81	62	123	4.93e-15	65.9
MS.gene003591.t1	MTR_7g118010	50.769	65	29	2	21	83	23	86	8.26e-15	63.9
MS.gene003591.t1	MTR_4g005320	50.820	61	29	1	21	81	70	129	1.52e-14	64.7
MS.gene003591.t1	MTR_3g105900	69.048	42	13	0	20	61	1171	1212	2.54e-14	66.6
MS.gene003591.t1	MTR_4g025830	47.059	68	32	2	21	85	79	145	3.64e-14	63.9
MS.gene003591.t1	MTR_1g061570	43.373	83	44	2	5	85	1	82	5.26e-14	62.4
MS.gene003591.t1	MTR_3g109160	50.000	72	33	2	10	81	60	128	6.44e-14	63.2
MS.gene003591.t1	MTR_1g024085	46.479	71	35	2	10	78	24	93	7.29e-14	62.8
MS.gene003591.t1	MTR_5g008380	81.250	32	6	0	55	86	246	277	8.82e-14	64.3
MS.gene003591.t1	MTR_0388s0020	42.857	77	40	2	12	85	66	141	1.06e-13	62.4
MS.gene003591.t1	MTR_1g063950	42.647	68	38	1	14	81	41	107	1.32e-13	61.6
MS.gene003591.t1	MTR_3g092220	46.970	66	32	2	20	83	32	96	1.57e-13	61.2
MS.gene003591.t1	MTR_7g101740	45.312	64	34	1	20	83	39	101	1.95e-13	60.8
MS.gene003591.t1	MTR_4g072160	48.438	64	32	1	18	81	34	96	1.41e-12	59.3
MS.gene003591.t1	MTR_8g026730	44.615	65	33	2	21	83	27	90	1.48e-12	58.5
MS.gene003591.t1	MTR_8g461210	42.105	76	41	2	3	78	19	91	2.38e-12	58.2
MS.gene003591.t1	MTR_4g021810	49.254	67	32	2	13	78	18	83	6.31e-12	56.6
MS.gene003591.t1	MTR_7g405740	37.662	77	46	2	11	86	56	131	6.40e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003591.t1	AT4G38840	72.059	68	18	1	20	86	32	99	1.43e-32	108
MS.gene003591.t1	AT2G21210	56.790	81	33	1	8	86	15	95	1.88e-30	103
MS.gene003591.t1	AT4G34800	55.952	84	34	1	1	81	1	84	7.76e-30	102
MS.gene003591.t1	AT2G21210	56.790	81	33	1	8	86	82	162	8.86e-30	103
MS.gene003591.t1	AT4G38825	62.500	72	26	1	16	86	18	89	9.78e-30	101
MS.gene003591.t1	AT5G18020	59.459	74	29	1	14	86	17	90	1.59e-29	100
MS.gene003591.t1	AT5G18080	60.811	74	28	1	14	86	17	90	1.86e-29	100
MS.gene003591.t1	AT5G18030	60.811	74	28	1	14	86	15	88	2.66e-29	100
MS.gene003591.t1	AT5G18050	58.108	74	30	1	14	86	17	90	6.48e-29	99.4
MS.gene003591.t1	AT2G21200	62.500	72	26	1	15	85	15	86	7.13e-29	99.4
MS.gene003591.t1	AT5G18060	62.162	74	26	2	15	86	17	90	7.64e-29	99.4
MS.gene003591.t1	AT4G34810	61.538	78	26	1	10	83	37	114	1.01e-28	99.8
MS.gene003591.t1	AT4G38850	57.317	82	27	2	8	86	13	89	1.23e-28	98.6
MS.gene003591.t1	AT5G18010	56.757	74	31	1	14	86	17	90	2.11e-27	95.5
MS.gene003591.t1	AT3G03820	55.844	77	31	1	13	86	19	95	2.33e-26	93.2
MS.gene003591.t1	AT3G03850	64.179	67	22	1	22	86	26	92	5.61e-26	92.0
MS.gene003591.t1	AT3G03840	55.263	76	32	1	13	86	19	94	6.00e-26	92.0
MS.gene003591.t1	AT4G34770	58.667	75	29	1	14	86	28	102	1.12e-25	91.7
MS.gene003591.t1	AT4G13790	48.235	85	41	2	3	85	8	91	6.27e-25	89.4
MS.gene003591.t1	AT3G03830	54.545	77	32	1	13	86	16	92	2.69e-24	87.8
MS.gene003591.t1	AT4G34790	62.687	67	22	2	21	84	39	105	2.39e-23	85.9
MS.gene003591.t1	AT4G34780	46.591	88	43	2	3	86	9	96	6.07e-22	82.4
MS.gene003591.t1	AT4G38860	51.471	68	33	0	19	86	38	105	6.89e-22	82.0
MS.gene003591.t1	AT2G21220	52.308	65	30	1	19	83	38	101	2.66e-20	78.2
MS.gene003591.t1	AT1G75580	52.239	67	31	1	19	85	42	107	8.04e-20	77.0
MS.gene003591.t1	AT4G34760	52.308	65	30	1	19	83	41	104	1.66e-19	76.3
MS.gene003591.t1	AT2G16580	52.308	65	30	1	19	83	42	105	5.13e-19	75.1
MS.gene003591.t1	AT4G36110	42.500	80	45	1	4	83	23	101	5.09e-18	72.4
MS.gene003591.t1	AT3G43120	54.237	59	26	1	20	78	78	135	1.63e-17	72.4
MS.gene003591.t1	AT2G18010	50.000	64	31	1	20	83	47	109	2.16e-17	70.9
MS.gene003591.t1	AT1G19830	55.000	60	26	1	19	78	46	104	3.31e-17	70.5
MS.gene003591.t1	AT5G20810	55.932	59	25	1	20	78	78	135	8.53e-17	70.9
MS.gene003591.t1	AT5G20810	55.932	59	25	1	20	78	78	135	1.22e-16	70.9
MS.gene003591.t1	AT3G20220	51.613	62	28	2	21	81	47	107	1.64e-15	66.2
MS.gene003591.t1	AT3G51200	43.902	82	40	3	5	81	19	99	8.57e-15	63.9
MS.gene003591.t1	AT5G66260	39.759	83	49	1	4	86	17	98	1.69e-14	63.2
MS.gene003591.t1	AT4G34750	46.875	64	33	1	20	83	36	98	2.60e-14	63.9
MS.gene003591.t1	AT4G34750	46.875	64	33	1	20	83	36	98	2.60e-14	63.9
MS.gene003591.t1	AT2G37030	47.619	63	32	1	20	82	48	109	1.62e-13	61.2
MS.gene003591.t1	AT2G46690	41.463	82	44	2	5	83	8	88	1.75e-13	61.2
MS.gene003591.t1	AT3G61900	41.667	84	41	3	10	86	15	97	2.96e-13	60.8
MS.gene003591.t1	AT1G75590	47.458	59	30	1	20	78	41	98	4.50e-13	60.8
MS.gene003591.t1	AT4G31320	45.588	68	36	1	14	81	73	139	5.97e-13	61.2
MS.gene003591.t1	AT5G10990	47.458	59	30	1	20	78	40	97	7.24e-13	60.1
MS.gene003591.t1	AT2G24400	47.059	68	35	1	14	81	57	123	8.45e-13	60.5
MS.gene003591.t1	AT3G53250	44.444	63	31	1	20	82	51	109	3.26e-12	58.2
MS.gene003591.t1	AT1G19840	47.458	59	30	1	20	78	40	97	3.63e-12	58.5
MS.gene003591.t1	AT3G53250	44.444	63	31	1	20	82	82	140	6.97e-12	57.8
MS.gene003591.t1	AT2G45210	45.902	61	29	2	16	73	74	133	7.70e-12	57.8
MS.gene003591.t1	AT4G00880	44.872	78	37	3	3	78	13	86	1.21e-11	56.6
MS.gene003591.t1	AT3G60690	50.000	56	24	2	21	73	88	142	1.40e-11	57.4
MS.gene003591.t1	AT4G12410	45.455	77	33	4	14	83	70	144	2.40e-11	56.6

Find 22 sgRNAs with CRISPR-Local

Find 21 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGGCTTCACTCAACAATTCT+TGG	0.243513	4.1:-30776808	None:intergenic
ACAATTCTTGGAATGAAGTT+TGG	0.300739	4.1:-30776796	None:intergenic
GTCATATTCAAATTGTTCCT+CGG	0.462990	4.1:-30776828	None:intergenic
TACACTGCTAGATATCCCTT+TGG	0.477829	4.1:-30776725	None:intergenic
GCATTTGAAGATGATGCCCT+TGG	0.524910	4.1:-30776692	None:intergenic
AAATGCTGTGGACGTTCCAA+AGG	0.529392	4.1:+30776709	MS.gene003591:CDS
TTTGAATATGACCATCCAAT+GGG	0.542663	4.1:+30776839	MS.gene003591:CDS
GCCCTTGGTCTGATGATACT+AGG	0.555365	4.1:-30776677	None:intergenic
ATTTGAATATGACCATCCAA+TGG	0.559485	4.1:+30776838	MS.gene003591:CDS
AAGAAAATGTCTTCTCTGCA+AGG	0.560690	4.1:-30776875	None:intergenic
GGCATCATCTTCAAATGCTG+TGG	0.570454	4.1:+30776697	MS.gene003591:CDS
GCTAATTCAATTTAAGTGAG+CGG	0.596086	4.1:-30776906	None:intergenic
TAGTGAGACCACCCATTGGA+TGG	0.596413	4.1:-30776850	None:intergenic
GGAATAGTGAGACCACCCAT+TGG	0.603922	4.1:-30776854	None:intergenic
AATGCTGTGGACGTTCCAAA+GGG	0.611071	4.1:+30776710	MS.gene003591:CDS
GTTTGGTTCAAATATGACAC+AGG	0.619454	4.1:-30776779	None:intergenic
ACCTAGTATCATCAGACCAA+GGG	0.629242	4.1:+30776676	MS.gene003591:CDS
AGAATTGTTGAGTGAAGCCG+AGG	0.639732	4.1:+30776811	MS.gene003591:CDS
TACCTAGTATCATCAGACCA+AGG	0.641611	4.1:+30776675	MS.gene003591:CDS
GAATATGACCATCCAATGGG+TGG	0.646056	4.1:+30776842	MS.gene003591:CDS
GGATATCTAGCAGTGTACGT+AGG	0.713792	4.1:+30776731	MS.gene003591:CDS
ACGTAGGAGAGAAAATGAAG+CGG	0.744637	4.1:+30776747	MS.gene003591:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	ACAATTCTTGGAATGAAGTT+TGG	-	chr4.1:30776799-30776818	None:intergenic	30.0%
	ATTTGAATATGACCATCCAA+TGG	+	chr4.1:30776838-30776857	MS.gene003591:CDS	30.0%
	GTCATATTCAAATTGTTCCT+CGG	-	chr4.1:30776831-30776850	None:intergenic	30.0%
	TTTGAATATGACCATCCAAT+GGG	+	chr4.1:30776839-30776858	MS.gene003591:CDS	30.0%
	AAGAAAATGTCTTCTCTGCA+AGG	-	chr4.1:30776878-30776897	None:intergenic	35.0%
!	GTTTGGTTCAAATATGACAC+AGG	-	chr4.1:30776782-30776801	None:intergenic	35.0%
	ACCTAGTATCATCAGACCAA+GGG	+	chr4.1:30776676-30776695	MS.gene003591:CDS	40.0%
	ACGTAGGAGAGAAAATGAAG+CGG	+	chr4.1:30776747-30776766	MS.gene003591:CDS	40.0%
	TACACTGCTAGATATCCCTT+TGG	-	chr4.1:30776728-30776747	None:intergenic	40.0%
	TACCTAGTATCATCAGACCA+AGG	+	chr4.1:30776675-30776694	MS.gene003591:CDS	40.0%
	AAATGCTGTGGACGTTCCAA+AGG	+	chr4.1:30776709-30776728	MS.gene003591:CDS	45.0%
	AATGCTGTGGACGTTCCAAA+GGG	+	chr4.1:30776710-30776729	MS.gene003591:CDS	45.0%
	AGAATTGTTGAGTGAAGCCG+AGG	+	chr4.1:30776811-30776830	MS.gene003591:CDS	45.0%
	CGGCTTCACTCAACAATTCT+TGG	-	chr4.1:30776811-30776830	None:intergenic	45.0%
	GAATATGACCATCCAATGGG+TGG	+	chr4.1:30776842-30776861	MS.gene003591:CDS	45.0%
	GCATTTGAAGATGATGCCCT+TGG	-	chr4.1:30776695-30776714	None:intergenic	45.0%
	GGATATCTAGCAGTGTACGT+AGG	+	chr4.1:30776731-30776750	MS.gene003591:CDS	45.0%
	GGCATCATCTTCAAATGCTG+TGG	+	chr4.1:30776697-30776716	MS.gene003591:CDS	45.0%
	GCCCTTGGTCTGATGATACT+AGG	-	chr4.1:30776680-30776699	None:intergenic	50.0%
	GGAATAGTGAGACCACCCAT+TGG	-	chr4.1:30776857-30776876	None:intergenic	50.0%
	TAGTGAGACCACCCATTGGA+TGG	-	chr4.1:30776853-30776872	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	30776662	30776922	30776662	ID=MS.gene003591
chr4.1	mRNA	30776662	30776922	30776662	ID=MS.gene003591.t1;Parent=MS.gene003591
chr4.1	exon	30776662	30776922	30776662	ID=MS.gene003591.t1.exon1;Parent=MS.gene003591.t1
chr4.1	CDS	30776662	30776922	30776662	ID=cds.MS.gene003591.t1;Parent=MS.gene003591.t1

Gene Sequence	>MS.gene003591 ATGGGTTTTCGTTTACCTAGTATCATCAGACCAAGGGCATCATCTTCAAATGCTGTGGACGTTCCAAAGGGATATCTAGCAGTGTACGTAGGAGAGAAAATGAAGCGGTTTGTGATTCCTGTGTCATATTTGAACCAAACTTCATTCCAAGAATTGTTGAGTGAAGCCGAGGAACAATTTGAATATGACCATCCAATGGGTGGTCTCACTATTCCTTGCAGAGAAGACATTTTCTTAGATATCACCGCTCACTTAAATTGA
Protein sequence	>MS.gene003591.t1 MGFRLPSIIRPRASSSNAVDVPKGYLAVYVGEKMKRFVIPVSYLNQTSFQELLSEAEEQFEYDHPMGGLTIPCREDIFLDITAHLN