Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045367.t1 | XP_003601668.1 | 95.7 | 92 | 4 | 0 | 1 | 92 | 1 | 92 | 2.70E-41 | 177.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045367.t1 | P33080 | 71.7 | 92 | 26 | 0 | 1 | 92 | 1 | 92 | 3.4e-32 | 138.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045367.t1 | G7JAQ2 | 95.7 | 92 | 4 | 0 | 1 | 92 | 1 | 92 | 2.0e-41 | 177.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045367.t1 | MTR_3g084160 | 95.652 | 92 | 4 | 0 | 1 | 92 | 1 | 92 | 3.05e-53 | 161 |
MS.gene045367.t1 | MTR_3g084190 | 92.391 | 92 | 7 | 0 | 1 | 92 | 1 | 92 | 8.67e-52 | 157 |
MS.gene045367.t1 | MTR_3g084230 | 91.304 | 92 | 8 | 0 | 1 | 92 | 1 | 92 | 1.62e-51 | 156 |
MS.gene045367.t1 | MTR_3g084250 | 80.435 | 92 | 18 | 0 | 1 | 92 | 1 | 92 | 2.87e-51 | 156 |
MS.gene045367.t1 | MTR_8g461420 | 90.217 | 92 | 9 | 0 | 1 | 92 | 1 | 92 | 8.50e-51 | 155 |
MS.gene045367.t1 | MTR_3g084210 | 88.043 | 92 | 11 | 0 | 1 | 92 | 1 | 92 | 2.49e-50 | 154 |
MS.gene045367.t1 | MTR_3g110045 | 85.556 | 90 | 13 | 0 | 3 | 92 | 62 | 151 | 1.57e-45 | 143 |
MS.gene045367.t1 | MTR_4g072500 | 69.565 | 92 | 28 | 0 | 1 | 92 | 1 | 92 | 4.22e-44 | 138 |
MS.gene045367.t1 | MTR_3g084150 | 68.478 | 92 | 29 | 0 | 1 | 92 | 1 | 92 | 5.38e-44 | 137 |
MS.gene045367.t1 | MTR_3g084180 | 67.391 | 92 | 30 | 0 | 1 | 92 | 1 | 92 | 3.08e-43 | 135 |
MS.gene045367.t1 | MTR_8g461410 | 67.391 | 92 | 30 | 0 | 1 | 92 | 1 | 92 | 4.32e-43 | 135 |
MS.gene045367.t1 | MTR_4g072530 | 68.889 | 90 | 28 | 0 | 1 | 90 | 1 | 90 | 9.80e-43 | 134 |
MS.gene045367.t1 | MTR_4g072640 | 68.132 | 91 | 29 | 0 | 1 | 91 | 1 | 91 | 4.72e-42 | 132 |
MS.gene045367.t1 | MTR_4g072870 | 68.132 | 91 | 28 | 1 | 1 | 90 | 1 | 91 | 5.65e-42 | 132 |
MS.gene045367.t1 | MTR_4g072310 | 66.667 | 93 | 30 | 1 | 1 | 92 | 1 | 93 | 7.64e-41 | 129 |
MS.gene045367.t1 | MTR_4g072570 | 66.304 | 92 | 31 | 0 | 1 | 92 | 1 | 92 | 9.75e-41 | 129 |
MS.gene045367.t1 | MTR_4g072480 | 65.217 | 92 | 32 | 0 | 1 | 92 | 1 | 92 | 1.42e-40 | 129 |
MS.gene045367.t1 | MTR_4g072240 | 68.132 | 91 | 28 | 1 | 1 | 90 | 1 | 91 | 1.64e-40 | 129 |
MS.gene045367.t1 | MTR_3g110042 | 68.966 | 87 | 27 | 0 | 1 | 87 | 1 | 87 | 1.69e-40 | 129 |
MS.gene045367.t1 | MTR_4g072620 | 63.043 | 92 | 34 | 0 | 1 | 92 | 1 | 92 | 6.87e-40 | 127 |
MS.gene045367.t1 | MTR_4g072880 | 63.441 | 93 | 33 | 1 | 1 | 92 | 1 | 93 | 9.21e-40 | 127 |
MS.gene045367.t1 | MTR_4g072680 | 65.217 | 92 | 32 | 0 | 1 | 92 | 1 | 92 | 1.31e-39 | 126 |
MS.gene045367.t1 | MTR_4g072270 | 64.516 | 93 | 32 | 1 | 1 | 92 | 1 | 93 | 1.84e-39 | 126 |
MS.gene045367.t1 | MTR_3g117630 | 67.442 | 86 | 28 | 0 | 7 | 92 | 7 | 92 | 1.95e-39 | 126 |
MS.gene045367.t1 | MTR_3g084170 | 67.742 | 93 | 28 | 2 | 1 | 92 | 1 | 92 | 2.08e-39 | 126 |
MS.gene045367.t1 | MTR_4g072260 | 65.591 | 93 | 31 | 1 | 1 | 92 | 1 | 93 | 2.70e-39 | 125 |
MS.gene045367.t1 | MTR_4g072730 | 63.333 | 90 | 33 | 0 | 1 | 90 | 1 | 90 | 3.76e-39 | 125 |
MS.gene045367.t1 | MTR_4g050700 | 65.591 | 93 | 31 | 1 | 1 | 92 | 1 | 93 | 5.94e-39 | 125 |
MS.gene045367.t1 | MTR_2g012410 | 65.591 | 93 | 31 | 1 | 1 | 92 | 1 | 93 | 5.94e-39 | 125 |
MS.gene045367.t1 | MTR_4g072860 | 64.516 | 93 | 32 | 1 | 1 | 92 | 1 | 93 | 6.56e-39 | 125 |
MS.gene045367.t1 | MTR_4g072830 | 65.217 | 92 | 30 | 1 | 1 | 92 | 1 | 90 | 7.32e-39 | 124 |
MS.gene045367.t1 | MTR_4g072300 | 65.934 | 91 | 30 | 1 | 1 | 90 | 1 | 91 | 7.70e-39 | 124 |
MS.gene045367.t1 | MTR_4g072890 | 65.934 | 91 | 30 | 1 | 1 | 90 | 1 | 91 | 1.33e-38 | 124 |
MS.gene045367.t1 | MTR_3g110038 | 67.742 | 93 | 28 | 2 | 1 | 92 | 1 | 92 | 1.51e-38 | 124 |
MS.gene045367.t1 | MTR_4g072490 | 68.132 | 91 | 22 | 2 | 1 | 90 | 1 | 85 | 1.52e-38 | 124 |
MS.gene045367.t1 | MTR_3g084240 | 66.667 | 93 | 29 | 2 | 1 | 92 | 1 | 92 | 1.80e-38 | 124 |
MS.gene045367.t1 | MTR_4g072370 | 67.033 | 91 | 26 | 2 | 1 | 90 | 1 | 88 | 2.39e-38 | 123 |
MS.gene045367.t1 | MTR_4g072230 | 65.591 | 93 | 29 | 2 | 1 | 92 | 1 | 91 | 2.46e-38 | 123 |
MS.gene045367.t1 | MTR_4g072600 | 68.132 | 91 | 24 | 1 | 1 | 91 | 1 | 86 | 2.50e-38 | 123 |
MS.gene045367.t1 | MTR_4g072460 | 63.043 | 92 | 34 | 0 | 1 | 92 | 1 | 92 | 2.56e-38 | 123 |
MS.gene045367.t1 | MTR_4g072330 | 64.444 | 90 | 30 | 1 | 1 | 90 | 1 | 88 | 2.76e-38 | 123 |
MS.gene045367.t1 | MTR_4g072220 | 64.516 | 93 | 32 | 1 | 1 | 92 | 1 | 93 | 2.98e-38 | 123 |
MS.gene045367.t1 | MTR_4g072250 | 66.667 | 93 | 29 | 2 | 1 | 92 | 1 | 92 | 3.56e-38 | 123 |
MS.gene045367.t1 | MTR_3g110032 | 62.366 | 93 | 34 | 1 | 1 | 92 | 1 | 93 | 1.80e-37 | 121 |
MS.gene045367.t1 | MTR_4g072580 | 66.304 | 92 | 24 | 2 | 1 | 91 | 1 | 86 | 2.47e-37 | 120 |
MS.gene045367.t1 | MTR_4g072740 | 65.934 | 91 | 24 | 2 | 1 | 90 | 1 | 85 | 2.91e-37 | 120 |
MS.gene045367.t1 | MTR_3g084220 | 64.516 | 93 | 31 | 2 | 1 | 92 | 1 | 92 | 6.30e-37 | 120 |
MS.gene045367.t1 | MTR_4g072820 | 70.330 | 91 | 20 | 2 | 1 | 90 | 1 | 85 | 8.48e-37 | 119 |
MS.gene045367.t1 | MTR_4g072610 | 64.835 | 91 | 26 | 1 | 1 | 91 | 1 | 85 | 9.36e-37 | 119 |
MS.gene045367.t1 | MTR_4g072630 | 65.556 | 90 | 27 | 1 | 1 | 90 | 1 | 86 | 2.33e-36 | 118 |
MS.gene045367.t1 | MTR_4g072470 | 67.033 | 91 | 23 | 2 | 1 | 90 | 1 | 85 | 7.23e-36 | 117 |
MS.gene045367.t1 | MTR_4g072540 | 67.778 | 90 | 25 | 1 | 1 | 90 | 1 | 86 | 1.26e-35 | 116 |
MS.gene045367.t1 | MTR_4g072650 | 63.736 | 91 | 27 | 1 | 1 | 91 | 1 | 85 | 1.64e-35 | 116 |
MS.gene045367.t1 | MTR_4g072465 | 64.444 | 90 | 28 | 1 | 1 | 90 | 1 | 86 | 2.20e-35 | 115 |
MS.gene045367.t1 | MTR_4g072590 | 68.889 | 90 | 23 | 1 | 1 | 90 | 1 | 85 | 6.48e-35 | 114 |
MS.gene045367.t1 | MTR_3g084260 | 60.215 | 93 | 36 | 1 | 1 | 92 | 1 | 93 | 8.71e-35 | 114 |
MS.gene045367.t1 | MTR_4g072850 | 63.830 | 94 | 32 | 1 | 1 | 92 | 1 | 94 | 2.28e-34 | 113 |
MS.gene045367.t1 | MTR_4g072380 | 67.391 | 92 | 22 | 3 | 1 | 90 | 1 | 86 | 9.83e-34 | 111 |
MS.gene045367.t1 | MTR_4g072720 | 66.667 | 90 | 26 | 1 | 1 | 90 | 1 | 86 | 1.34e-33 | 111 |
MS.gene045367.t1 | MTR_4g072660 | 57.609 | 92 | 34 | 1 | 1 | 92 | 1 | 87 | 1.80e-33 | 111 |
MS.gene045367.t1 | MTR_4g072670 | 64.444 | 90 | 28 | 1 | 1 | 90 | 1 | 86 | 3.85e-33 | 110 |
MS.gene045367.t1 | MTR_4g072510 | 62.222 | 90 | 30 | 1 | 1 | 90 | 1 | 86 | 4.25e-32 | 107 |
MS.gene045367.t1 | MTR_5g008360 | 62.500 | 80 | 30 | 0 | 13 | 92 | 4 | 83 | 7.53e-32 | 107 |
MS.gene045367.t1 | MTR_4g072450 | 65.556 | 90 | 26 | 1 | 1 | 90 | 1 | 85 | 2.00e-31 | 105 |
MS.gene045367.t1 | MTR_4g072980 | 56.522 | 92 | 37 | 2 | 1 | 89 | 1 | 92 | 3.39e-31 | 105 |
MS.gene045367.t1 | MTR_4g072940 | 61.957 | 92 | 33 | 1 | 3 | 92 | 33 | 124 | 1.30e-30 | 105 |
MS.gene045367.t1 | MTR_4g072690 | 63.333 | 90 | 28 | 1 | 1 | 90 | 1 | 85 | 6.31e-30 | 102 |
MS.gene045367.t1 | MTR_4g072910 | 64.179 | 67 | 24 | 0 | 24 | 90 | 34 | 100 | 4.45e-29 | 100 |
MS.gene045367.t1 | MTR_5g008370 | 56.667 | 90 | 39 | 0 | 1 | 90 | 1 | 90 | 4.51e-29 | 101 |
MS.gene045367.t1 | MTR_4g072560 | 50.515 | 97 | 40 | 3 | 1 | 89 | 1 | 97 | 1.19e-28 | 99.4 |
MS.gene045367.t1 | MTR_5g008350 | 61.250 | 80 | 24 | 2 | 1 | 79 | 1 | 74 | 1.45e-28 | 98.6 |
MS.gene045367.t1 | MTR_4g072750 | 62.500 | 80 | 28 | 1 | 1 | 78 | 1 | 80 | 1.45e-28 | 98.6 |
MS.gene045367.t1 | MTR_3g084200 | 65.278 | 72 | 23 | 2 | 1 | 71 | 1 | 71 | 5.21e-28 | 97.8 |
MS.gene045367.t1 | MTR_4g072770 | 66.667 | 66 | 22 | 0 | 25 | 90 | 15 | 80 | 1.24e-27 | 96.3 |
MS.gene045367.t1 | MTR_3g110035 | 69.697 | 66 | 20 | 0 | 27 | 92 | 73 | 138 | 2.75e-27 | 97.1 |
MS.gene045367.t1 | MTR_4g072550 | 58.904 | 73 | 30 | 0 | 20 | 92 | 31 | 103 | 4.72e-27 | 95.5 |
MS.gene045367.t1 | MTR_4g072280 | 63.235 | 68 | 24 | 1 | 1 | 67 | 1 | 68 | 7.03e-27 | 94.4 |
MS.gene045367.t1 | MTR_3g117640 | 60.294 | 68 | 26 | 1 | 24 | 90 | 33 | 100 | 5.58e-25 | 90.1 |
MS.gene045367.t1 | MTR_4g072290 | 51.613 | 93 | 30 | 2 | 1 | 92 | 1 | 79 | 1.51e-24 | 88.2 |
MS.gene045367.t1 | MTR_3g117610 | 57.971 | 69 | 28 | 1 | 23 | 91 | 43 | 110 | 3.05e-23 | 85.9 |
MS.gene045367.t1 | MTR_3g113310 | 55.882 | 68 | 29 | 1 | 22 | 89 | 39 | 105 | 1.34e-22 | 84.3 |
MS.gene045367.t1 | MTR_4g072930 | 49.383 | 81 | 35 | 2 | 16 | 90 | 30 | 110 | 9.64e-22 | 82.0 |
MS.gene045367.t1 | MTR_4g072190 | 56.716 | 67 | 28 | 1 | 23 | 89 | 34 | 99 | 3.52e-21 | 80.5 |
MS.gene045367.t1 | MTR_6g077850 | 48.529 | 68 | 35 | 0 | 24 | 91 | 33 | 100 | 3.16e-20 | 77.8 |
MS.gene045367.t1 | MTR_5g021820 | 48.837 | 86 | 40 | 2 | 7 | 89 | 19 | 103 | 4.36e-20 | 77.8 |
MS.gene045367.t1 | MTR_8g076040 | 54.545 | 66 | 29 | 1 | 24 | 89 | 40 | 104 | 7.46e-19 | 74.7 |
MS.gene045367.t1 | MTR_8g461400 | 48.387 | 93 | 20 | 3 | 1 | 92 | 1 | 66 | 1.96e-18 | 72.4 |
MS.gene045367.t1 | MTR_4g072840 | 51.648 | 91 | 12 | 3 | 1 | 90 | 1 | 60 | 3.05e-18 | 71.6 |
MS.gene045367.t1 | MTR_4g025830 | 52.459 | 61 | 25 | 2 | 25 | 82 | 79 | 138 | 1.41e-17 | 72.8 |
MS.gene045367.t1 | MTR_4g072160 | 48.529 | 68 | 34 | 1 | 24 | 91 | 36 | 102 | 1.37e-16 | 69.7 |
MS.gene045367.t1 | MTR_1g024085 | 40.230 | 87 | 49 | 2 | 7 | 91 | 17 | 102 | 7.57e-16 | 68.2 |
MS.gene045367.t1 | MTR_8g461210 | 39.773 | 88 | 52 | 1 | 4 | 91 | 14 | 100 | 9.08e-16 | 67.0 |
MS.gene045367.t1 | MTR_1g094750 | 44.444 | 81 | 41 | 2 | 7 | 84 | 29 | 108 | 1.87e-15 | 66.2 |
MS.gene045367.t1 | MTR_0388s0020 | 45.455 | 77 | 37 | 3 | 5 | 78 | 56 | 130 | 4.10e-15 | 66.2 |
MS.gene045367.t1 | MTR_7g118010 | 43.478 | 69 | 36 | 2 | 25 | 91 | 23 | 90 | 4.96e-15 | 64.7 |
MS.gene045367.t1 | MTR_2g043960 | 43.333 | 90 | 41 | 2 | 2 | 82 | 44 | 132 | 6.32e-15 | 65.9 |
MS.gene045367.t1 | MTR_7g101740 | 48.438 | 64 | 32 | 1 | 24 | 87 | 39 | 101 | 9.20e-15 | 64.3 |
MS.gene045367.t1 | MTR_1g063950 | 44.286 | 70 | 38 | 1 | 14 | 83 | 37 | 105 | 1.00e-14 | 64.7 |
MS.gene045367.t1 | MTR_4g005310 | 53.125 | 64 | 27 | 2 | 21 | 82 | 58 | 120 | 1.01e-14 | 65.5 |
MS.gene045367.t1 | MTR_4g124750 | 52.542 | 59 | 27 | 1 | 24 | 82 | 68 | 125 | 1.05e-14 | 65.5 |
MS.gene045367.t1 | MTR_1g061570 | 50.847 | 59 | 28 | 1 | 24 | 82 | 18 | 75 | 2.31e-14 | 63.5 |
MS.gene045367.t1 | MTR_3g092220 | 37.037 | 81 | 48 | 2 | 12 | 90 | 20 | 99 | 3.48e-14 | 62.8 |
MS.gene045367.t1 | MTR_1g009150 | 47.059 | 68 | 35 | 1 | 15 | 82 | 61 | 127 | 1.32e-13 | 62.8 |
MS.gene045367.t1 | MTR_4g005320 | 46.154 | 65 | 34 | 1 | 25 | 89 | 70 | 133 | 3.64e-13 | 61.6 |
MS.gene045367.t1 | MTR_8g026730 | 40.580 | 69 | 38 | 2 | 25 | 91 | 27 | 94 | 6.35e-13 | 59.7 |
MS.gene045367.t1 | MTR_7g405740 | 38.095 | 84 | 45 | 3 | 6 | 84 | 44 | 125 | 9.65e-13 | 60.5 |
MS.gene045367.t1 | MTR_3g098970 | 34.118 | 85 | 54 | 2 | 9 | 92 | 36 | 119 | 1.61e-11 | 57.0 |
MS.gene045367.t1 | MTR_3g109160 | 41.892 | 74 | 42 | 1 | 9 | 82 | 53 | 125 | 3.65e-11 | 56.2 |
MS.gene045367.t1 | MTR_3g097120 | 42.466 | 73 | 33 | 2 | 20 | 84 | 4 | 75 | 3.90e-11 | 55.1 |
MS.gene045367.t1 | MTR_2g066830 | 37.037 | 81 | 44 | 2 | 2 | 82 | 41 | 114 | 4.20e-11 | 55.8 |
MS.gene045367.t1 | MTR_8g096440 | 39.474 | 76 | 43 | 2 | 10 | 85 | 32 | 104 | 8.47e-11 | 55.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045367.t1 | AT5G18020 | 58.442 | 77 | 31 | 1 | 16 | 91 | 15 | 91 | 5.86e-28 | 97.4 |
MS.gene045367.t1 | AT2G21200 | 61.111 | 72 | 27 | 1 | 19 | 89 | 15 | 86 | 3.04e-27 | 95.5 |
MS.gene045367.t1 | AT5G18080 | 58.667 | 75 | 30 | 1 | 16 | 89 | 15 | 89 | 5.38e-27 | 94.7 |
MS.gene045367.t1 | AT2G21210 | 49.474 | 95 | 43 | 2 | 1 | 90 | 1 | 95 | 6.88e-27 | 94.7 |
MS.gene045367.t1 | AT4G34800 | 56.757 | 74 | 29 | 1 | 13 | 83 | 9 | 82 | 7.91e-27 | 94.7 |
MS.gene045367.t1 | AT4G38840 | 49.495 | 99 | 41 | 2 | 1 | 90 | 1 | 99 | 7.97e-27 | 94.7 |
MS.gene045367.t1 | AT5G18050 | 57.333 | 75 | 31 | 1 | 16 | 89 | 15 | 89 | 8.15e-27 | 94.4 |
MS.gene045367.t1 | AT4G34770 | 55.952 | 84 | 32 | 2 | 9 | 90 | 22 | 102 | 8.88e-27 | 94.7 |
MS.gene045367.t1 | AT5G18010 | 56.579 | 76 | 32 | 1 | 16 | 90 | 15 | 90 | 9.40e-27 | 94.4 |
MS.gene045367.t1 | AT5G18060 | 57.895 | 76 | 31 | 1 | 16 | 90 | 15 | 90 | 1.24e-26 | 94.0 |
MS.gene045367.t1 | AT4G38850 | 56.098 | 82 | 32 | 2 | 10 | 87 | 5 | 86 | 1.42e-26 | 94.0 |
MS.gene045367.t1 | AT2G21210 | 49.474 | 95 | 43 | 2 | 1 | 90 | 68 | 162 | 2.75e-26 | 95.5 |
MS.gene045367.t1 | AT4G38825 | 57.333 | 75 | 31 | 1 | 17 | 90 | 15 | 89 | 2.89e-26 | 92.8 |
MS.gene045367.t1 | AT3G03820 | 58.904 | 73 | 27 | 1 | 18 | 87 | 20 | 92 | 3.04e-26 | 93.2 |
MS.gene045367.t1 | AT3G03840 | 62.319 | 69 | 24 | 1 | 21 | 87 | 23 | 91 | 6.72e-26 | 92.4 |
MS.gene045367.t1 | AT5G18030 | 55.952 | 84 | 34 | 2 | 10 | 90 | 5 | 88 | 7.85e-26 | 92.0 |
MS.gene045367.t1 | AT4G34810 | 61.538 | 65 | 21 | 1 | 24 | 84 | 47 | 111 | 2.26e-25 | 91.7 |
MS.gene045367.t1 | AT3G03850 | 62.687 | 67 | 23 | 1 | 26 | 90 | 26 | 92 | 3.37e-24 | 87.8 |
MS.gene045367.t1 | AT4G38860 | 51.765 | 85 | 38 | 1 | 9 | 90 | 21 | 105 | 3.50e-23 | 85.5 |
MS.gene045367.t1 | AT2G21220 | 51.765 | 85 | 37 | 2 | 9 | 90 | 21 | 104 | 9.29e-23 | 84.7 |
MS.gene045367.t1 | AT4G34790 | 62.295 | 61 | 21 | 1 | 25 | 83 | 39 | 99 | 1.02e-22 | 84.7 |
MS.gene045367.t1 | AT4G34780 | 54.167 | 72 | 30 | 1 | 23 | 91 | 26 | 97 | 2.40e-22 | 83.6 |
MS.gene045367.t1 | AT4G13790 | 48.193 | 83 | 35 | 2 | 7 | 87 | 13 | 89 | 1.07e-21 | 81.6 |
MS.gene045367.t1 | AT1G75580 | 49.383 | 81 | 40 | 1 | 9 | 89 | 28 | 107 | 1.95e-21 | 81.3 |
MS.gene045367.t1 | AT3G03830 | 50.588 | 85 | 35 | 2 | 10 | 87 | 5 | 89 | 1.18e-20 | 79.0 |
MS.gene045367.t1 | AT4G34760 | 55.224 | 67 | 29 | 1 | 23 | 89 | 41 | 106 | 3.85e-20 | 78.2 |
MS.gene045367.t1 | AT5G66260 | 56.061 | 66 | 28 | 1 | 25 | 90 | 34 | 98 | 2.58e-18 | 73.2 |
MS.gene045367.t1 | AT1G19830 | 50.588 | 85 | 30 | 2 | 9 | 82 | 21 | 104 | 2.59e-18 | 73.6 |
MS.gene045367.t1 | AT5G20810 | 54.545 | 66 | 29 | 1 | 17 | 82 | 71 | 135 | 8.35e-18 | 73.6 |
MS.gene045367.t1 | AT5G20810 | 54.545 | 66 | 29 | 1 | 17 | 82 | 71 | 135 | 1.06e-17 | 73.9 |
MS.gene045367.t1 | AT2G16580 | 52.239 | 67 | 31 | 1 | 23 | 89 | 42 | 107 | 2.52e-17 | 70.9 |
MS.gene045367.t1 | AT3G43120 | 50.725 | 69 | 33 | 1 | 14 | 82 | 68 | 135 | 2.85e-17 | 72.0 |
MS.gene045367.t1 | AT4G36110 | 50.000 | 66 | 32 | 1 | 24 | 89 | 39 | 103 | 1.27e-16 | 68.9 |
MS.gene045367.t1 | AT2G18010 | 50.000 | 66 | 32 | 1 | 24 | 89 | 47 | 111 | 5.01e-16 | 67.8 |
MS.gene045367.t1 | AT4G34750 | 41.176 | 68 | 39 | 1 | 24 | 91 | 36 | 102 | 2.04e-15 | 67.0 |
MS.gene045367.t1 | AT4G34750 | 41.176 | 68 | 39 | 1 | 24 | 91 | 36 | 102 | 2.04e-15 | 67.0 |
MS.gene045367.t1 | AT1G75590 | 43.836 | 73 | 40 | 1 | 10 | 82 | 27 | 98 | 3.27e-15 | 66.6 |
MS.gene045367.t1 | AT2G45210 | 47.619 | 63 | 29 | 2 | 18 | 77 | 72 | 133 | 3.84e-15 | 66.6 |
MS.gene045367.t1 | AT5G10990 | 42.647 | 68 | 38 | 1 | 24 | 91 | 40 | 106 | 5.44e-15 | 65.9 |
MS.gene045367.t1 | AT2G37030 | 47.619 | 63 | 32 | 1 | 24 | 86 | 48 | 109 | 1.38e-14 | 64.3 |
MS.gene045367.t1 | AT4G00880 | 41.026 | 78 | 43 | 2 | 16 | 91 | 19 | 95 | 2.08e-14 | 63.9 |
MS.gene045367.t1 | AT3G61900 | 41.250 | 80 | 41 | 3 | 17 | 91 | 20 | 98 | 2.38e-14 | 63.9 |
MS.gene045367.t1 | AT3G20220 | 44.286 | 70 | 37 | 2 | 14 | 82 | 36 | 104 | 2.71e-14 | 63.5 |
MS.gene045367.t1 | AT3G51200 | 50.769 | 65 | 30 | 2 | 20 | 83 | 34 | 97 | 6.38e-14 | 62.0 |
MS.gene045367.t1 | AT1G19840 | 49.153 | 59 | 29 | 1 | 24 | 82 | 40 | 97 | 1.32e-13 | 62.4 |
MS.gene045367.t1 | AT5G53590 | 41.667 | 72 | 36 | 2 | 24 | 90 | 45 | 115 | 4.72e-13 | 60.8 |
MS.gene045367.t1 | AT2G46690 | 37.662 | 77 | 44 | 2 | 17 | 90 | 16 | 91 | 6.10e-13 | 60.1 |
MS.gene045367.t1 | AT3G60690 | 44.118 | 68 | 34 | 2 | 25 | 89 | 88 | 154 | 6.14e-13 | 61.2 |
MS.gene045367.t1 | AT3G12830 | 42.857 | 70 | 38 | 2 | 14 | 82 | 38 | 106 | 2.01e-12 | 58.9 |
MS.gene045367.t1 | AT1G56150 | 46.552 | 58 | 30 | 1 | 25 | 82 | 38 | 94 | 2.49e-12 | 58.2 |
MS.gene045367.t1 | AT1G16510 | 41.538 | 65 | 37 | 1 | 25 | 89 | 54 | 117 | 3.24e-12 | 58.5 |
MS.gene045367.t1 | AT3G53250 | 39.683 | 63 | 34 | 1 | 24 | 86 | 51 | 109 | 4.43e-12 | 57.8 |
MS.gene045367.t1 | AT4G09530 | 42.857 | 70 | 34 | 3 | 16 | 82 | 22 | 88 | 6.92e-12 | 57.0 |
MS.gene045367.t1 | AT4G12410 | 42.466 | 73 | 37 | 3 | 13 | 82 | 65 | 135 | 1.44e-11 | 57.4 |
MS.gene045367.t1 | AT4G22620 | 44.262 | 61 | 30 | 2 | 25 | 82 | 79 | 138 | 6.47e-11 | 55.5 |
Find 18 sgRNAs with CRISPR-Local
Find 19 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAGAACATGTCTTCTTTGC+AGG | 0.267485 | 3.4:-78888337 | None:intergenic |
CTAAGCAATTCTTGAAATAA+AGG | 0.274282 | 3.4:-78888261 | None:intergenic |
GGCTCATTCAAGAATGATAT+TGG | 0.332163 | 3.4:-78888240 | None:intergenic |
TACACTGCAAGATTGCCTTT+TGG | 0.364820 | 3.4:-78888186 | None:intergenic |
AGTGATGATCTTCTAATAAC+AGG | 0.385377 | 3.4:-78888126 | None:intergenic |
AACCGAATTCCTCTTCAGAT+TGG | 0.451328 | 3.4:-78888284 | None:intergenic |
AGCCAATCTGAAGAGGAATT+CGG | 0.463119 | 3.4:+78888282 | MS.gene045367:CDS |
TTCGGTTATTGCCATCCAAT+GGG | 0.477895 | 3.4:+78888300 | MS.gene045367:CDS |
ATTCGGTTATTGCCATCCAA+TGG | 0.505676 | 3.4:+78888299 | MS.gene045367:CDS |
GGCAATCTTGCAGTGTATGT+TGG | 0.512427 | 3.4:+78888192 | MS.gene045367:CDS |
AAGAACATGTCTTCTTTGCA+GGG | 0.543455 | 3.4:-78888336 | None:intergenic |
TGTATGTTGGAGAGAAAATG+AGG | 0.557529 | 3.4:+78888205 | MS.gene045367:CDS |
TCAATCATCTAGCAAACAAG+TGG | 0.562035 | 3.4:+78888158 | MS.gene045367:CDS |
AAACAAGTGGAAGTTCCAAA+AGG | 0.569150 | 3.4:+78888171 | MS.gene045367:CDS |
TTGTAAGACAACCCATTGGA+TGG | 0.581997 | 3.4:-78888311 | None:intergenic |
ATTGCTTAGCCAATCTGAAG+AGG | 0.582237 | 3.4:+78888275 | MS.gene045367:CDS |
GGAATTGTAAGACAACCCAT+TGG | 0.634826 | 3.4:-78888315 | None:intergenic |
ATGTTGGAGAGAAAATGAGG+AGG | 0.699822 | 3.4:+78888208 | MS.gene045367:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | CTAAGCAATTCTTGAAATAA+AGG | - | chr3.4:78888264-78888283 | None:intergenic | 25.0% |
AGTGATGATCTTCTAATAAC+AGG | - | chr3.4:78888129-78888148 | None:intergenic | 30.0% | |
!! | AAACAACTTCTGTTTTGAAC+AGG | + | chr3.4:78888361-78888380 | MS.gene045367:CDS | 30.0% |
AAACAAGTGGAAGTTCCAAA+AGG | + | chr3.4:78888171-78888190 | MS.gene045367:CDS | 35.0% | |
AAGAACATGTCTTCTTTGCA+GGG | - | chr3.4:78888339-78888358 | None:intergenic | 35.0% | |
GGCTCATTCAAGAATGATAT+TGG | - | chr3.4:78888243-78888262 | None:intergenic | 35.0% | |
TAAGAACATGTCTTCTTTGC+AGG | - | chr3.4:78888340-78888359 | None:intergenic | 35.0% | |
TCAATCATCTAGCAAACAAG+TGG | + | chr3.4:78888158-78888177 | MS.gene045367:CDS | 35.0% | |
TGTATGTTGGAGAGAAAATG+AGG | + | chr3.4:78888205-78888224 | MS.gene045367:CDS | 35.0% | |
AACCGAATTCCTCTTCAGAT+TGG | - | chr3.4:78888287-78888306 | None:intergenic | 40.0% | |
AGCCAATCTGAAGAGGAATT+CGG | + | chr3.4:78888282-78888301 | MS.gene045367:CDS | 40.0% | |
ATGTTGGAGAGAAAATGAGG+AGG | + | chr3.4:78888208-78888227 | MS.gene045367:CDS | 40.0% | |
ATTCGGTTATTGCCATCCAA+TGG | + | chr3.4:78888299-78888318 | MS.gene045367:CDS | 40.0% | |
ATTGCTTAGCCAATCTGAAG+AGG | + | chr3.4:78888275-78888294 | MS.gene045367:CDS | 40.0% | |
GGAATTGTAAGACAACCCAT+TGG | - | chr3.4:78888318-78888337 | None:intergenic | 40.0% | |
TTCGGTTATTGCCATCCAAT+GGG | + | chr3.4:78888300-78888319 | MS.gene045367:CDS | 40.0% | |
TTGTAAGACAACCCATTGGA+TGG | - | chr3.4:78888314-78888333 | None:intergenic | 40.0% | |
! | TACACTGCAAGATTGCCTTT+TGG | - | chr3.4:78888189-78888208 | None:intergenic | 40.0% |
GGCAATCTTGCAGTGTATGT+TGG | + | chr3.4:78888192-78888211 | MS.gene045367:CDS | 45.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 78888111 | 78888389 | 78888111 | ID=MS.gene045367 |
chr3.4 | mRNA | 78888111 | 78888389 | 78888111 | ID=MS.gene045367.t1;Parent=MS.gene045367 |
chr3.4 | exon | 78888111 | 78888389 | 78888111 | ID=MS.gene045367.t1.exon1;Parent=MS.gene045367.t1 |
chr3.4 | CDS | 78888111 | 78888389 | 78888111 | ID=cds.MS.gene045367.t1;Parent=MS.gene045367.t1 |
Gene Sequence |
Protein sequence |