AlfalfaGEDB | MS.gene063112

M. sativa cultivar XinJiangDaYe / MS.gene063112

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063112.t1	AES63709.1	94.6	93	5	0	1	93	1	93	3.20E-42	180.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063112.t1	P33080	71.0	93	26	1	1	93	1	92	2.6e-32	139.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063112.t1	G7ILE9	94.6	93	5	0	1	93	1	93	2.3e-42	180.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene063112	MS.gene23368	PPI
MS.gene063112	MS.gene003585	PPI
MS.gene063112	MS.gene057817	PPI
MS.gene063112	MS.gene50668	PPI
MS.gene063112	MS.gene003581	PPI
MS.gene063112	MS.gene70684	PPI
MS.gene063112	MS.gene062958	PPI
MS.gene063112	MS.gene057798	PPI
MS.gene063112	MS.gene003612	PPI
MS.gene063112	MS.gene062983	PPI
MS.gene003626	MS.gene063112	PPI
MS.gene063112	MS.gene062967	PPI
MS.gene062946	MS.gene063112	PPI
MS.gene063112	MS.gene003579	PPI
MS.gene057805	MS.gene063112	PPI
MS.gene063112	MS.gene062940	PPI
MS.gene003605	MS.gene063112	PPI
MS.gene063112	MS.gene062989	PPI
MS.gene063112	MS.gene003595	PPI
MS.gene063112	MS.gene062959	PPI
MS.gene063112	MS.gene003607	PPI
MS.gene063112	MS.gene003606	PPI
MS.gene063112	MS.gene50686	PPI
MS.gene062971	MS.gene063112	PPI
MS.gene23373	MS.gene063112	PPI
MS.gene063112	MS.gene50664	PPI
MS.gene063112	MS.gene057785	PPI
MS.gene063112	MS.gene50670	PPI
MS.gene063112	MS.gene50669	PPI
MS.gene063112	MS.gene70685	PPI
MS.gene062975	MS.gene063112	PPI
MS.gene50689	MS.gene063112	PPI
MS.gene063112	MS.gene062941	PPI
MS.gene003576	MS.gene063112	PPI
MS.gene063112	MS.gene50662	PPI
MS.gene063112	MS.gene50660	PPI
MS.gene063112	MS.gene003623	PPI
MS.gene063112	MS.gene057799	PPI
MS.gene063112	MS.gene003628	PPI
MS.gene063112	MS.gene057794	PPI
MS.gene063112	MS.gene50688	PPI
MS.gene063112	MS.gene003629	PPI
MS.gene063112	MS.gene003603	PPI
MS.gene063112	MS.gene062966	PPI
MS.gene062970	MS.gene063112	PPI
MS.gene063112	MS.gene062980	PPI
MS.gene063112	MS.gene23367	PPI
MS.gene062942	MS.gene063112	PPI
MS.gene063112	MS.gene003610	PPI
MS.gene063112	MS.gene057802	PPI
MS.gene063112	MS.gene50773	PPI
MS.gene063112	MS.gene057796	PPI
MS.gene063112	MS.gene50682	PPI
MS.gene062972	MS.gene063112	PPI
MS.gene063112	MS.gene057800	PPI
MS.gene063112	MS.gene50653	PPI
MS.gene063112	MS.gene003597	PPI
MS.gene063112	MS.gene003598	PPI
MS.gene003580	MS.gene063112	PPI
MS.gene063112	MS.gene50690	PPI
MS.gene003582	MS.gene063112	PPI
MS.gene063112	MS.gene057780	PPI
MS.gene063112	MS.gene057788	PPI
MS.gene063112	MS.gene50685	PPI
MS.gene063112	MS.gene003613	PPI
MS.gene063112	MS.gene003584	PPI
MS.gene063112	MS.gene057791	PPI
MS.gene063112	MS.gene50674	PPI
MS.gene50772	MS.gene063112	PPI
MS.gene057809	MS.gene063112	PPI
MS.gene063112	MS.gene003630	PPI
MS.gene063112	MS.gene057782	PPI
MS.gene063112	MS.gene057779	PPI
MS.gene063112	MS.gene50673	PPI
MS.gene062978	MS.gene063112	PPI
MS.gene063112	MS.gene062965	PPI
MS.gene063112	MS.gene50771	PPI
MS.gene063112	MS.gene022358	PPI
MS.gene003593	MS.gene063112	PPI
MS.gene063112	MS.gene062954	PPI
MS.gene063112	MS.gene23369	PPI
MS.gene057807	MS.gene063112	PPI
MS.gene063112	MS.gene062986	PPI
MS.gene063112	MS.gene057783	PPI
MS.gene063112	MS.gene50770	PPI
MS.gene063112	MS.gene062987	PPI
MS.gene063112	MS.gene057811	PPI
MS.gene063112	MS.gene057806	PPI
MS.gene063112	MS.gene062964	PPI
MS.gene063112	MS.gene77525	PPI
MS.gene063112	MS.gene062944	PPI
MS.gene063112	MS.gene50658	PPI
MS.gene063112	MS.gene057777	PPI
MS.gene063112	MS.gene50655	PPI
MS.gene063112	MS.gene28863	PPI
MS.gene063112	MS.gene062945	PPI
MS.gene057816	MS.gene063112	PPI
MS.gene063112	MS.gene057804	PPI
MS.gene063112	MS.gene50651	PPI
MS.gene063112	MS.gene50656	PPI
MS.gene063112	MS.gene062969	PPI
MS.gene063112	MS.gene70683	PPI
MS.gene063112	MS.gene062962	PPI
MS.gene063112	MS.gene50666	PPI
MS.gene50657	MS.gene063112	PPI
MS.gene063112	MS.gene062985	PPI
MS.gene063112	MS.gene057784	PPI
MS.gene063112	MS.gene062953	PPI
MS.gene063112	MS.gene003622	PPI
MS.gene50683	MS.gene063112	PPI
MS.gene063112	MS.gene003599	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063112.t1	MTR_4g050700	94.624	93	5	0	1	93	1	93	2.15e-62	184
MS.gene063112.t1	MTR_2g012410	94.624	93	5	0	1	93	1	93	2.15e-62	184
MS.gene063112.t1	MTR_3g084170	89.247	93	9	1	1	93	1	92	5.61e-58	173
MS.gene063112.t1	MTR_3g084240	88.172	93	10	1	1	93	1	92	6.78e-57	170
MS.gene063112.t1	MTR_3g110032	84.946	93	14	0	1	93	1	93	3.22e-55	166
MS.gene063112.t1	MTR_3g084220	84.946	93	13	1	1	93	1	92	1.13e-54	164
MS.gene063112.t1	MTR_3g084260	84.946	93	14	0	1	93	1	93	2.11e-54	164
MS.gene063112.t1	MTR_3g110038	82.796	93	15	1	1	93	1	92	1.23e-52	159
MS.gene063112.t1	MTR_3g084150	80.645	93	17	1	1	93	1	92	2.08e-52	159
MS.gene063112.t1	MTR_8g461410	79.570	93	18	1	1	93	1	92	4.73e-52	158
MS.gene063112.t1	MTR_3g084180	79.570	93	18	1	1	93	1	92	2.22e-51	156
MS.gene063112.t1	MTR_4g072880	73.118	93	25	0	1	93	1	93	1.98e-48	149
MS.gene063112.t1	MTR_3g110042	79.545	88	17	1	1	88	1	87	5.83e-48	147
MS.gene063112.t1	MTR_4g072310	73.118	93	25	0	1	93	1	93	5.99e-48	147
MS.gene063112.t1	MTR_3g117630	77.778	90	20	0	4	93	3	92	2.27e-47	146
MS.gene063112.t1	MTR_4g072270	70.968	93	27	0	1	93	1	93	2.81e-47	146
MS.gene063112.t1	MTR_4g072250	72.043	93	25	1	1	93	1	92	1.51e-46	144
MS.gene063112.t1	MTR_4g072500	72.043	93	25	1	1	93	1	92	2.06e-46	144
MS.gene063112.t1	MTR_4g072860	70.968	93	27	0	1	93	1	93	8.92e-46	142
MS.gene063112.t1	MTR_4g072230	73.118	93	23	1	1	93	1	91	3.14e-45	140
MS.gene063112.t1	MTR_4g072370	73.626	91	21	1	1	91	1	88	1.17e-44	139
MS.gene063112.t1	MTR_4g072530	72.527	91	24	1	1	91	1	90	1.86e-44	139
MS.gene063112.t1	MTR_4g072330	71.429	91	23	1	1	91	1	88	3.84e-44	138
MS.gene063112.t1	MTR_4g072870	70.330	91	27	0	1	91	1	91	4.18e-44	138
MS.gene063112.t1	MTR_4g072240	69.231	91	28	0	1	91	1	91	6.00e-44	137
MS.gene063112.t1	MTR_4g072480	68.817	93	28	1	1	93	1	92	2.87e-43	135
MS.gene063112.t1	MTR_3g084250	69.892	93	27	1	1	93	1	92	5.31e-43	135
MS.gene063112.t1	MTR_4g072300	68.132	91	29	0	1	91	1	91	6.21e-43	135
MS.gene063112.t1	MTR_4g072220	67.742	93	30	0	1	93	1	93	6.52e-43	135
MS.gene063112.t1	MTR_4g072640	70.330	91	26	1	1	91	1	90	7.62e-43	135
MS.gene063112.t1	MTR_4g072490	70.330	91	21	1	1	91	1	85	9.51e-43	134
MS.gene063112.t1	MTR_4g072620	67.742	93	29	1	1	93	1	92	1.05e-42	134
MS.gene063112.t1	MTR_4g072740	71.429	91	20	1	1	91	1	85	2.00e-42	133
MS.gene063112.t1	MTR_4g072890	67.033	91	30	0	1	91	1	91	3.71e-42	133
MS.gene063112.t1	MTR_4g072680	67.742	93	29	1	1	93	1	92	5.14e-42	132
MS.gene063112.t1	MTR_4g072850	72.340	94	25	1	1	93	1	94	5.89e-42	132
MS.gene063112.t1	MTR_4g072830	73.864	88	20	1	1	88	1	85	7.68e-42	132
MS.gene063112.t1	MTR_4g072470	70.330	91	21	1	1	91	1	85	1.51e-41	131
MS.gene063112.t1	MTR_4g072260	65.591	93	32	0	1	93	1	93	2.96e-41	130
MS.gene063112.t1	MTR_4g072730	66.304	92	30	1	1	92	1	91	4.22e-41	130
MS.gene063112.t1	MTR_3g084200	84.932	73	10	1	1	73	1	72	4.91e-41	130
MS.gene063112.t1	MTR_4g072580	70.330	91	21	1	1	91	1	85	6.81e-41	129
MS.gene063112.t1	MTR_4g072465	68.132	91	24	1	1	91	1	86	1.57e-40	129
MS.gene063112.t1	MTR_4g072460	65.591	93	31	1	1	93	1	92	2.34e-40	128
MS.gene063112.t1	MTR_4g072570	67.742	93	29	1	1	93	1	92	2.79e-40	128
MS.gene063112.t1	MTR_4g072630	68.132	91	24	1	1	91	1	86	4.92e-40	127
MS.gene063112.t1	MTR_4g072610	70.330	91	20	2	1	91	1	84	4.27e-39	125
MS.gene063112.t1	MTR_3g084190	69.892	93	27	1	1	93	1	92	5.27e-39	125
MS.gene063112.t1	MTR_3g084210	70.968	93	26	1	1	93	1	92	7.00e-39	125
MS.gene063112.t1	MTR_8g461420	70.330	91	26	1	1	91	1	90	1.53e-38	124
MS.gene063112.t1	MTR_4g072380	68.132	91	24	1	1	91	1	86	3.20e-38	123
MS.gene063112.t1	MTR_4g072600	67.033	91	24	1	1	91	1	85	7.13e-38	122
MS.gene063112.t1	MTR_4g072660	65.591	93	26	2	1	93	1	87	8.05e-38	122
MS.gene063112.t1	MTR_4g072720	69.231	91	23	1	1	91	1	86	8.54e-38	122
MS.gene063112.t1	MTR_4g072650	69.231	91	21	2	1	91	1	84	9.63e-38	122
MS.gene063112.t1	MTR_4g072540	68.132	91	24	1	1	91	1	86	1.43e-37	121
MS.gene063112.t1	MTR_4g072670	67.033	91	25	1	1	91	1	86	1.86e-37	121
MS.gene063112.t1	MTR_3g084230	69.231	91	27	1	1	91	1	90	2.29e-37	121
MS.gene063112.t1	MTR_4g072820	67.033	91	24	2	1	91	1	85	3.29e-37	120
MS.gene063112.t1	MTR_4g072590	65.934	91	25	1	1	91	1	85	3.53e-37	120
MS.gene063112.t1	MTR_3g084160	66.667	93	30	1	1	93	1	92	6.28e-37	120
MS.gene063112.t1	MTR_4g072510	68.132	91	24	1	1	91	1	86	1.02e-36	119
MS.gene063112.t1	MTR_4g072940	67.391	92	29	1	3	93	33	124	2.82e-36	119
MS.gene063112.t1	MTR_4g072550	70.000	80	23	1	15	93	24	103	5.90e-36	117
MS.gene063112.t1	MTR_5g008370	79.710	69	14	0	24	92	23	91	6.82e-36	119
MS.gene063112.t1	MTR_5g008360	68.354	79	25	0	15	93	5	83	7.10e-36	117
MS.gene063112.t1	MTR_5g008350	70.000	80	18	1	1	80	1	74	9.28e-36	116
MS.gene063112.t1	MTR_3g110045	69.231	91	27	1	3	93	62	151	1.37e-35	118
MS.gene063112.t1	MTR_4g072450	63.736	91	27	1	1	91	1	85	8.58e-35	114
MS.gene063112.t1	MTR_4g072690	62.637	91	28	1	1	91	1	85	1.25e-34	114
MS.gene063112.t1	MTR_4g072770	75.758	66	16	0	26	91	15	80	4.78e-33	109
MS.gene063112.t1	MTR_4g072980	54.737	95	41	2	1	93	1	95	5.25e-33	110
MS.gene063112.t1	MTR_4g072560	53.061	98	39	2	1	91	1	98	2.27e-32	108
MS.gene063112.t1	MTR_8g461400	64.516	93	6	3	1	93	1	66	5.12e-32	106
MS.gene063112.t1	MTR_4g072910	69.565	69	21	0	23	91	32	100	1.80e-31	106
MS.gene063112.t1	MTR_3g117640	53.465	101	38	2	1	92	1	101	1.79e-30	103
MS.gene063112.t1	MTR_4g072290	55.914	93	27	1	1	93	1	79	2.61e-30	102
MS.gene063112.t1	MTR_4g072750	68.919	74	20	2	1	72	1	73	6.76e-28	97.1
MS.gene063112.t1	MTR_4g072280	62.667	75	28	0	1	75	1	75	2.31e-27	95.5
MS.gene063112.t1	MTR_3g110035	65.152	66	23	0	28	93	73	138	2.50e-26	94.7
MS.gene063112.t1	MTR_4g072930	53.086	81	33	2	16	91	30	110	2.54e-23	86.3
MS.gene063112.t1	MTR_6g077850	50.000	68	34	0	24	91	32	99	3.17e-21	80.5
MS.gene063112.t1	MTR_3g113310	54.688	64	28	1	25	88	41	103	6.86e-21	79.7
MS.gene063112.t1	MTR_3g117610	57.812	64	26	1	25	88	44	106	1.38e-20	79.3
MS.gene063112.t1	MTR_4g072190	49.367	79	36	2	10	88	23	97	3.10e-20	78.2
MS.gene063112.t1	MTR_2g043960	58.065	62	25	1	25	86	75	135	1.00e-19	78.6
MS.gene063112.t1	MTR_8g076040	54.167	72	31	2	17	88	33	102	1.11e-19	76.6
MS.gene063112.t1	MTR_4g124750	50.000	80	35	2	13	88	52	130	1.61e-19	77.8
MS.gene063112.t1	MTR_5g021820	56.250	64	27	1	25	88	39	101	2.56e-19	75.9
MS.gene063112.t1	MTR_4g072840	50.000	88	13	3	1	88	1	57	3.75e-19	74.3
MS.gene063112.t1	MTR_1g009150	60.000	60	23	1	24	83	69	127	3.47e-18	74.7
MS.gene063112.t1	MTR_4g005310	51.515	66	31	1	22	86	58	123	4.78e-17	71.2
MS.gene063112.t1	MTR_1g094750	45.882	85	42	3	5	86	26	109	3.07e-16	68.2
MS.gene063112.t1	MTR_4g005320	58.491	53	21	1	26	78	70	121	1.17e-15	68.2
MS.gene063112.t1	MTR_3g105900	72.093	43	12	0	23	65	1169	1211	2.10e-15	70.1
MS.gene063112.t1	MTR_3g092220	50.000	64	29	2	22	83	29	91	3.59e-15	65.5
MS.gene063112.t1	MTR_8g461210	44.737	76	41	1	3	78	12	86	6.27e-15	65.1
MS.gene063112.t1	MTR_7g118010	48.438	64	30	2	25	86	22	84	9.13e-15	64.3
MS.gene063112.t1	MTR_3g109160	50.746	67	32	1	26	92	69	134	1.11e-14	65.5
MS.gene063112.t1	MTR_4g025830	46.970	66	31	2	26	88	79	143	3.95e-14	63.9
MS.gene063112.t1	MTR_8g026730	49.206	63	29	2	26	86	27	88	4.38e-14	62.8
MS.gene063112.t1	MTR_1g024085	43.902	82	43	2	4	83	13	93	6.52e-14	63.2
MS.gene063112.t1	MTR_4g072160	46.269	67	35	1	17	83	28	93	7.95e-14	62.8
MS.gene063112.t1	MTR_0388s0020	40.741	81	43	3	11	88	61	139	9.33e-14	62.8
MS.gene063112.t1	MTR_4g021810	55.932	59	24	2	26	83	26	83	1.67e-13	60.8
MS.gene063112.t1	MTR_1g061570	44.928	69	37	1	24	92	17	84	1.31e-12	59.3
MS.gene063112.t1	MTR_1g059770	37.500	72	44	1	18	89	41	111	1.44e-12	59.3
MS.gene063112.t1	MTR_7g104950	37.333	75	46	1	16	90	40	113	2.31e-12	58.5
MS.gene063112.t1	MTR_7g101740	48.438	64	32	1	25	88	39	101	4.24e-12	57.8
MS.gene063112.t1	MTR_3g098970	35.802	81	50	2	13	93	41	119	7.73e-12	57.8
MS.gene063112.t1	MTR_7g405740	49.231	65	30	2	22	86	65	126	9.71e-12	57.8
MS.gene063112.t1	MTR_3g097120	45.205	73	31	2	22	86	5	76	1.28e-11	56.2
MS.gene063112.t1	MTR_8g101520	37.500	88	50	2	8	91	28	114	4.25e-11	56.2
MS.gene063112.t1	MTR_7g104940	40.984	61	35	1	29	89	53	112	5.43e-11	55.1
MS.gene063112.t1	MTR_8g094980	42.667	75	29	2	25	86	2	75	6.92e-11	54.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063112.t1	AT4G38840	57.576	99	34	2	1	91	1	99	9.92e-35	114
MS.gene063112.t1	AT5G18020	61.842	76	28	1	17	91	15	90	1.42e-31	106
MS.gene063112.t1	AT5G18060	61.842	76	28	1	17	91	15	90	4.69e-31	105
MS.gene063112.t1	AT4G34800	55.914	93	33	2	1	90	1	88	4.82e-31	105
MS.gene063112.t1	AT4G38825	66.667	69	22	1	24	91	21	89	1.01e-30	104
MS.gene063112.t1	AT5G18050	60.526	76	29	1	17	91	15	90	1.19e-30	103
MS.gene063112.t1	AT5G18080	73.016	63	16	1	27	88	25	87	1.67e-30	103
MS.gene063112.t1	AT2G21200	65.714	70	23	1	22	90	17	86	6.92e-30	102
MS.gene063112.t1	AT5G18030	68.182	66	20	1	27	91	23	88	9.95e-30	101
MS.gene063112.t1	AT3G03840	57.447	94	31	3	8	92	2	95	1.65e-29	101
MS.gene063112.t1	AT4G34770	68.571	70	20	1	25	92	34	103	9.13e-29	99.8
MS.gene063112.t1	AT5G18010	68.750	64	19	1	26	88	24	87	1.25e-28	99.0
MS.gene063112.t1	AT3G03850	66.176	68	21	1	27	92	26	93	1.77e-28	98.6
MS.gene063112.t1	AT3G03820	62.162	74	25	1	22	92	23	96	4.94e-28	97.8
MS.gene063112.t1	AT2G21210	54.118	85	32	2	9	91	16	95	7.03e-28	97.4
MS.gene063112.t1	AT4G38850	61.972	71	24	1	24	91	19	89	1.40e-27	96.3
MS.gene063112.t1	AT4G34810	63.768	69	21	1	25	89	47	115	1.40e-27	97.4
MS.gene063112.t1	AT2G21210	56.098	82	29	2	9	88	83	159	5.03e-27	97.4
MS.gene063112.t1	AT3G03830	51.136	88	36	2	8	88	2	89	9.74e-26	91.7
MS.gene063112.t1	AT4G34790	62.121	66	23	1	26	89	39	104	3.48e-25	90.9
MS.gene063112.t1	AT4G13790	52.439	82	32	2	9	88	13	89	4.84e-24	87.4
MS.gene063112.t1	AT4G34780	56.944	72	28	1	23	91	25	96	1.86e-22	84.0
MS.gene063112.t1	AT4G38860	56.250	64	28	0	25	88	39	102	4.99e-21	80.1
MS.gene063112.t1	AT1G75580	59.375	64	25	1	25	88	43	105	2.51e-20	78.6
MS.gene063112.t1	AT4G34760	57.812	64	26	1	25	88	42	104	3.74e-20	78.2
MS.gene063112.t1	AT3G43120	59.322	59	23	1	25	83	78	135	6.70e-20	79.0
MS.gene063112.t1	AT4G36110	45.455	88	45	2	5	90	17	103	9.75e-20	77.0
MS.gene063112.t1	AT5G20810	58.065	62	25	1	25	86	78	138	3.18e-19	77.4
MS.gene063112.t1	AT5G20810	58.065	62	25	1	25	86	78	138	6.19e-19	77.0
MS.gene063112.t1	AT2G16580	56.250	64	27	1	25	88	43	105	6.46e-19	75.1
MS.gene063112.t1	AT2G21220	48.193	83	37	3	10	88	21	101	7.40e-19	74.7
MS.gene063112.t1	AT2G18010	50.000	74	36	1	17	90	39	111	1.29e-18	74.3
MS.gene063112.t1	AT1G19830	53.030	66	30	1	25	90	47	111	1.88e-17	71.6
MS.gene063112.t1	AT3G20220	54.839	62	26	2	26	86	47	107	1.02e-16	69.7
MS.gene063112.t1	AT2G46690	43.590	78	40	2	18	92	16	92	2.30e-16	68.9
MS.gene063112.t1	AT5G66260	43.820	89	47	2	5	91	11	98	4.68e-16	67.4
MS.gene063112.t1	AT1G75590	42.857	84	43	2	4	83	16	98	1.11e-14	65.5
MS.gene063112.t1	AT4G31320	58.491	53	21	1	26	78	80	131	1.22e-14	65.9
MS.gene063112.t1	AT2G24400	58.929	56	22	1	23	78	61	115	2.26e-14	65.1
MS.gene063112.t1	AT5G10990	45.205	73	38	2	11	83	27	97	3.39e-14	63.9
MS.gene063112.t1	AT3G51200	47.761	67	33	2	25	90	38	103	7.53e-14	62.0
MS.gene063112.t1	AT4G00880	53.125	64	27	2	25	86	27	89	2.53e-13	61.2
MS.gene063112.t1	AT2G37030	49.206	63	31	1	25	87	48	109	2.58e-13	61.2
MS.gene063112.t1	AT3G61900	44.444	72	36	2	23	91	27	97	3.27e-13	61.2
MS.gene063112.t1	AT5G53590	43.056	72	35	2	25	91	45	115	3.54e-13	61.2
MS.gene063112.t1	AT3G03847	41.176	85	47	3	3	86	48	130	6.25e-13	60.1
MS.gene063112.t1	AT4G34750	45.902	61	32	1	23	83	34	93	8.86e-13	60.5
MS.gene063112.t1	AT4G34750	45.902	61	32	1	23	83	34	93	8.86e-13	60.5
MS.gene063112.t1	AT1G19840	40.964	83	45	2	4	83	16	97	1.12e-12	60.1
MS.gene063112.t1	AT3G12830	46.875	64	29	2	15	78	43	101	1.93e-12	58.9
MS.gene063112.t1	AT4G12410	45.312	64	31	2	26	86	76	138	6.64e-12	58.2
MS.gene063112.t1	AT1G16510	47.368	57	29	1	22	78	50	105	9.46e-12	57.4
MS.gene063112.t1	AT4G22620	41.176	68	36	2	22	86	75	141	1.78e-11	57.0
MS.gene063112.t1	AT4G09530	44.828	58	29	2	24	78	26	83	2.86e-11	55.5
MS.gene063112.t1	AT1G56150	47.170	53	27	1	26	78	38	89	6.58e-11	54.7
MS.gene063112.t1	AT3G09870	40.278	72	40	2	17	86	36	106	9.70e-11	54.3

Find 26 sgRNAs with CRISPR-Local

Find 27 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATGTTACTTCTAGCTTCAA+TGG	0.305744	3.3:+95606005	MS.gene063112:CDS
AGTCGAGCAGAGGAAGAATT+TGG	0.314640	3.3:+95605927	MS.gene063112:CDS
GCAAGTCTTGAAATGAAGTT+TGG	0.322572	3.3:-95605902	None:intergenic
TTCTTATAGCTGCAGGTAAA+CGG	0.395925	3.3:-95605761	None:intergenic
TTGCTACTTTCAATGACGTT+TGG	0.417236	3.3:-95605803	None:intergenic
ATGTTACTTCTAGCTTCAAT+GGG	0.472702	3.3:+95606006	MS.gene063112:CDS
GTTTACCTGCAGCTATAAGA+AGG	0.480619	3.3:+95605763	MS.gene063112:CDS
CTTCCGTGCAAGGAATTGTC+AGG	0.505414	3.3:-95605971	None:intergenic
GGCTATCTTGCGGTGTATGT+CGG	0.512630	3.3:+95605837	MS.gene063112:CDS
GACGCCCTTCTTATAGCTGC+AGG	0.518710	3.3:-95605768	None:intergenic
GGAATTGTCAGGCCACCCAT+TGG	0.535298	3.3:-95605960	None:intergenic
GTTTGGTTCAAGTACGATGT+GGG	0.539225	3.3:-95605885	None:intergenic
TTTGGATACGATCATCCAAT+GGG	0.558204	3.3:+95605945	MS.gene063112:CDS
AAAGTAGCAAATGTGCCAAA+GGG	0.568934	3.3:+95605816	MS.gene063112:CDS
ATTTGGATACGATCATCCAA+TGG	0.569256	3.3:+95605944	MS.gene063112:CDS
GAAAGTAGCAAATGTGCCAA+AGG	0.572179	3.3:+95605815	MS.gene063112:CDS
TACACCGCAAGATAGCCCTT+TGG	0.573553	3.3:-95605831	None:intergenic
TGGCCTGACAATTCCTTGCA+CGG	0.594989	3.3:+95605968	MS.gene063112:CDS
AGACTTGCTGAGTCGAGCAG+AGG	0.606026	3.3:+95605917	MS.gene063112:CDS
TTTACCTGCAGCTATAAGAA+GGG	0.615768	3.3:+95605764	MS.gene063112:CDS
TTTGGTTCAAGTACGATGTG+GGG	0.657577	3.3:-95605884	None:intergenic
TGTGCCAAAGGGCTATCTTG+CGG	0.659086	3.3:+95605827	MS.gene063112:CDS
AGTTTGGTTCAAGTACGATG+TGG	0.664008	3.3:-95605886	None:intergenic
GGATACGATCATCCAATGGG+TGG	0.670499	3.3:+95605948	MS.gene063112:CDS
TCTTGCGGTGTATGTCGGAG+AGG	0.683361	3.3:+95605842	MS.gene063112:CDS
ATGTCGGAGAGGAAATGAAG+CGG	0.724041	3.3:+95605853	MS.gene063112:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATGTTACTTCTAGCTTCAAT+GGG	+	chr3.3:95606006-95606025	MS.gene063112:CDS	30.0%
	AAAAAATCATCTTCCGTGCA+AGG	-	chr3.3:95605984-95606003	None:intergenic	35.0%
	AAAGTAGCAAATGTGCCAAA+GGG	+	chr3.3:95605816-95605835	MS.gene063112:CDS	35.0%
	ATTTGGATACGATCATCCAA+TGG	+	chr3.3:95605944-95605963	MS.gene063112:CDS	35.0%
	GCAAGTCTTGAAATGAAGTT+TGG	-	chr3.3:95605905-95605924	None:intergenic	35.0%
	TTCTTATAGCTGCAGGTAAA+CGG	-	chr3.3:95605764-95605783	None:intergenic	35.0%
	TTTACCTGCAGCTATAAGAA+GGG	+	chr3.3:95605764-95605783	MS.gene063112:CDS	35.0%
	TTTGGATACGATCATCCAAT+GGG	+	chr3.3:95605945-95605964	MS.gene063112:CDS	35.0%
!!	CATGTTACTTCTAGCTTCAA+TGG	+	chr3.3:95606005-95606024	MS.gene063112:CDS	35.0%
!!	TTGCTACTTTCAATGACGTT+TGG	-	chr3.3:95605806-95605825	None:intergenic	35.0%
	GAAAGTAGCAAATGTGCCAA+AGG	+	chr3.3:95605815-95605834	MS.gene063112:CDS	40.0%
	GTTTACCTGCAGCTATAAGA+AGG	+	chr3.3:95605763-95605782	MS.gene063112:CDS	40.0%
!	AGTTTGGTTCAAGTACGATG+TGG	-	chr3.3:95605889-95605908	None:intergenic	40.0%
!	GTTTGGTTCAAGTACGATGT+GGG	-	chr3.3:95605888-95605907	None:intergenic	40.0%
!	TTTGGTTCAAGTACGATGTG+GGG	-	chr3.3:95605887-95605906	None:intergenic	40.0%
	AGTCGAGCAGAGGAAGAATT+TGG	+	chr3.3:95605927-95605946	MS.gene063112:CDS	45.0%
	ATGTCGGAGAGGAAATGAAG+CGG	+	chr3.3:95605853-95605872	MS.gene063112:CDS	45.0%
	CTTCCGTGCAAGGAATTGTC+AGG	-	chr3.3:95605974-95605993	None:intergenic	50.0%
	GGATACGATCATCCAATGGG+TGG	+	chr3.3:95605948-95605967	MS.gene063112:CDS	50.0%
	GGCTATCTTGCGGTGTATGT+CGG	+	chr3.3:95605837-95605856	MS.gene063112:CDS	50.0%
	TACACCGCAAGATAGCCCTT+TGG	-	chr3.3:95605834-95605853	None:intergenic	50.0%
	TGGCCTGACAATTCCTTGCA+CGG	+	chr3.3:95605968-95605987	MS.gene063112:CDS	50.0%
	TGTGCCAAAGGGCTATCTTG+CGG	+	chr3.3:95605827-95605846	MS.gene063112:CDS	50.0%
	GACGCCCTTCTTATAGCTGC+AGG	-	chr3.3:95605771-95605790	None:intergenic	55.0%
	GGAATTGTCAGGCCACCCAT+TGG	-	chr3.3:95605963-95605982	None:intergenic	55.0%
	TCTTGCGGTGTATGTCGGAG+AGG	+	chr3.3:95605842-95605861	MS.gene063112:CDS	55.0%
!!	AGACTTGCTGAGTCGAGCAG+AGG	+	chr3.3:95605917-95605936	MS.gene063112:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	95605753	95606034	95605753	ID=MS.gene063112
chr3.3	mRNA	95605753	95606034	95605753	ID=MS.gene063112.t1;Parent=MS.gene063112
chr3.3	exon	95605753	95606034	95605753	ID=MS.gene063112.t1.exon1;Parent=MS.gene063112.t1
chr3.3	CDS	95605753	95606034	95605753	ID=cds.MS.gene063112.t1;Parent=MS.gene063112.t1

Gene Sequence	>MS.gene063112 ATGGGATTCCGTTTACCTGCAGCTATAAGAAGGGCGTCATTTAGCAGCAACCAAACGTCATTGAAAGTAGCAAATGTGCCAAAGGGCTATCTTGCGGTGTATGTCGGAGAGGAAATGAAGCGGTTTGTGATCCCCACATCGTACTTGAACCAAACTTCATTTCAAGACTTGCTGAGTCGAGCAGAGGAAGAATTTGGATACGATCATCCAATGGGTGGCCTGACAATTCCTTGCACGGAAGATGATTTTTTGCATGTTACTTCTAGCTTCAATGGGCTATAA
Protein sequence	>MS.gene063112.t1 MGFRLPAAIRRASFSSNQTSLKVANVPKGYLAVYVGEEMKRFVIPTSYLNQTSFQDLLSRAEEEFGYDHPMGGLTIPCTEDDFLHVTSSFNGL