AlfalfaGEDB | MS.gene003625

M. sativa cultivar XinJiangDaYe / MS.gene003625

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003625.t1	XP_003607103.1	94.6	93	5	0	1	93	1	93	5.00E-43	183.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003625.t1	P33083	79.1	91	18	1	1	91	1	90	1.3e-34	146.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003625.t1	G7JL25	94.6	93	5	0	1	93	1	93	3.6e-43	183.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene003625	MS.gene003580	PPI
MS.gene003625	MS.gene50651	PPI
MS.gene003625	MS.gene003576	PPI
MS.gene003625	MS.gene057782	PPI
MS.gene003625	MS.gene062969	PPI
MS.gene003625	MS.gene50666	PPI
MS.gene003625	MS.gene057784	PPI
MS.gene003625	MS.gene062953	PPI
MS.gene062975	MS.gene003625	PPI
MS.gene003625	MS.gene23369	PPI
MS.gene003625	MS.gene50770	PPI
MS.gene003625	MS.gene062987	PPI
MS.gene003625	MS.gene057817	PPI
MS.gene003625	MS.gene70684	PPI
MS.gene003625	MS.gene062964	PPI
MS.gene003625	MS.gene003612	PPI
MS.gene003625	MS.gene77525	PPI
MS.gene003625	MS.gene057777	PPI
MS.gene003625	MS.gene003626	PPI
MS.gene003625	MS.gene062945	PPI
MS.gene003625	MS.gene062967	PPI
MS.gene062970	MS.gene003625	PPI
MS.gene003625	MS.gene057804	PPI
MS.gene003625	MS.gene003579	PPI
MS.gene062942	MS.gene003625	PPI
MS.gene003625	MS.gene062971	PPI
MS.gene003605	MS.gene003625	PPI
MS.gene003625	MS.gene062989	PPI
MS.gene003625	MS.gene50657	PPI
MS.gene003625	MS.gene003607	PPI
MS.gene003625	MS.gene50656	PPI
MS.gene003625	MS.gene003606	PPI
MS.gene003625	MS.gene50686	PPI
MS.gene23373	MS.gene003625	PPI
MS.gene003625	MS.gene70683	PPI
MS.gene003625	MS.gene062962	PPI
MS.gene062972	MS.gene003625	PPI
MS.gene003625	MS.gene062985	PPI
MS.gene003625	MS.gene50669	PPI
MS.gene003625	MS.gene70685	PPI
MS.gene003625	MS.gene003622	PPI
MS.gene003625	MS.gene003599	PPI
MS.gene003625	MS.gene23368	PPI
MS.gene003625	MS.gene50662	PPI
MS.gene003625	MS.gene003585	PPI
MS.gene003625	MS.gene50660	PPI
MS.gene003625	MS.gene003623	PPI
MS.gene003625	MS.gene50668	PPI
MS.gene003625	MS.gene003581	PPI
MS.gene003625	MS.gene062958	PPI
MS.gene003625	MS.gene003628	PPI
MS.gene003625	MS.gene057798	PPI
MS.gene003625	MS.gene003582	PPI
MS.gene003625	MS.gene057794	PPI
MS.gene003625	MS.gene003629	PPI
MS.gene003625	MS.gene062983	PPI
MS.gene003625	MS.gene062966	PPI
MS.gene003625	MS.gene062980	PPI
MS.gene003625	MS.gene23367	PPI
MS.gene062978	MS.gene003625	PPI
MS.gene003625	MS.gene062940	PPI
MS.gene003625	MS.gene003610	PPI
MS.gene003625	MS.gene057809	PPI
MS.gene003625	MS.gene003595	PPI
MS.gene003625	MS.gene062959	PPI
MS.gene003625	MS.gene50664	PPI
MS.gene003625	MS.gene057785	PPI
MS.gene003593	MS.gene003625	PPI
MS.gene003625	MS.gene50773	PPI
MS.gene003625	MS.gene50670	PPI
MS.gene003625	MS.gene50682	PPI
MS.gene003625	MS.gene057805	PPI
MS.gene003625	MS.gene057800	PPI
MS.gene003625	MS.gene50653	PPI
MS.gene003625	MS.gene003598	PPI
MS.gene003625	MS.gene50690	PPI
MS.gene003625	MS.gene057807	PPI
MS.gene003625	MS.gene062941	PPI
MS.gene003625	MS.gene057780	PPI
MS.gene003625	MS.gene003613	PPI
MS.gene003625	MS.gene50674	PPI
MS.gene057816	MS.gene003625	PPI
MS.gene003625	MS.gene057799	PPI
MS.gene003625	MS.gene50688	PPI
MS.gene003625	MS.gene003603	PPI
MS.gene003625	MS.gene003630	PPI
MS.gene003625	MS.gene057779	PPI
MS.gene003625	MS.gene50673	PPI
MS.gene003625	MS.gene50689	PPI
MS.gene003625	MS.gene50683	PPI
MS.gene003625	MS.gene062965	PPI
MS.gene003625	MS.gene50771	PPI
MS.gene003625	MS.gene50772	PPI
MS.gene003625	MS.gene022358	PPI
MS.gene003625	MS.gene057802	PPI
MS.gene003625	MS.gene057796	PPI
MS.gene003625	MS.gene062954	PPI
MS.gene003625	MS.gene003597	PPI
MS.gene003625	MS.gene062986	PPI
MS.gene003625	MS.gene057783	PPI
MS.gene003625	MS.gene057811	PPI
MS.gene003625	MS.gene057806	PPI
MS.gene003625	MS.gene057788	PPI
MS.gene003625	MS.gene062944	PPI
MS.gene003625	MS.gene50658	PPI
MS.gene003625	MS.gene50655	PPI
MS.gene003625	MS.gene28863	PPI
MS.gene003625	MS.gene50685	PPI
MS.gene003625	MS.gene003584	PPI
MS.gene003625	MS.gene057791	PPI
MS.gene062946	MS.gene003625	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003625.t1	MTR_4g072270	94.624	93	5	0	1	93	1	93	7.27e-62	182
MS.gene003625.t1	MTR_4g072310	90.323	93	9	0	1	93	1	93	6.78e-60	177
MS.gene003625.t1	MTR_4g072880	90.323	93	9	0	1	93	1	93	1.12e-59	177
MS.gene003625.t1	MTR_4g072230	82.796	93	14	1	1	93	1	91	2.19e-53	161
MS.gene003625.t1	MTR_4g072250	81.720	93	16	1	1	93	1	92	4.83e-52	158
MS.gene003625.t1	MTR_4g072860	78.495	93	20	0	1	93	1	93	2.92e-51	156
MS.gene003625.t1	MTR_3g084150	75.269	93	22	1	1	93	1	92	1.66e-49	151
MS.gene003625.t1	MTR_3g084180	74.194	93	23	1	1	93	1	92	1.57e-48	149
MS.gene003625.t1	MTR_4g050700	70.968	93	27	0	1	93	1	93	3.42e-48	148
MS.gene003625.t1	MTR_2g012410	70.968	93	27	0	1	93	1	93	3.42e-48	148
MS.gene003625.t1	MTR_8g461410	72.043	93	25	1	1	93	1	92	8.35e-48	147
MS.gene003625.t1	MTR_3g084170	74.194	93	23	1	1	93	1	92	1.14e-47	147
MS.gene003625.t1	MTR_4g072500	70.968	93	26	1	1	93	1	92	7.17e-47	145
MS.gene003625.t1	MTR_3g110038	73.118	93	24	1	1	93	1	92	1.08e-46	144
MS.gene003625.t1	MTR_3g084240	73.118	93	24	1	1	93	1	92	1.11e-46	144
MS.gene003625.t1	MTR_4g072640	73.626	91	23	1	1	91	1	90	1.73e-46	144
MS.gene003625.t1	MTR_4g072570	70.968	93	26	1	1	93	1	92	7.26e-46	142
MS.gene003625.t1	MTR_4g072240	71.429	91	26	0	1	91	1	91	9.80e-46	142
MS.gene003625.t1	MTR_4g072480	72.043	93	25	1	1	93	1	92	3.27e-45	140
MS.gene003625.t1	MTR_3g110032	68.817	93	29	0	1	93	1	93	4.06e-45	140
MS.gene003625.t1	MTR_3g084220	70.968	93	26	1	1	93	1	92	4.74e-45	140
MS.gene003625.t1	MTR_3g117630	73.333	90	24	0	4	93	3	92	5.12e-45	140
MS.gene003625.t1	MTR_4g072620	72.043	93	25	1	1	93	1	92	7.44e-45	140
MS.gene003625.t1	MTR_4g072370	72.527	91	22	1	1	91	1	88	9.02e-45	139
MS.gene003625.t1	MTR_4g072680	72.043	93	25	1	1	93	1	92	1.10e-44	139
MS.gene003625.t1	MTR_4g072530	69.231	91	27	1	1	91	1	90	1.84e-44	139
MS.gene003625.t1	MTR_4g072460	72.043	93	25	1	1	93	1	92	2.04e-44	139
MS.gene003625.t1	MTR_4g072850	74.468	94	23	1	1	93	1	94	6.08e-44	137
MS.gene003625.t1	MTR_4g072220	66.667	93	31	0	1	93	1	93	7.18e-44	137
MS.gene003625.t1	MTR_4g072730	70.652	92	26	1	1	92	1	91	9.28e-44	137
MS.gene003625.t1	MTR_4g072870	67.033	91	30	0	1	91	1	91	4.00e-43	135
MS.gene003625.t1	MTR_4g072300	67.033	91	30	0	1	91	1	91	6.28e-43	135
MS.gene003625.t1	MTR_3g110042	72.727	88	23	1	1	88	1	87	1.05e-42	134
MS.gene003625.t1	MTR_4g072890	68.132	91	29	0	1	91	1	91	1.10e-42	134
MS.gene003625.t1	MTR_3g084250	67.742	93	29	1	1	93	1	92	1.24e-42	134
MS.gene003625.t1	MTR_4g072260	66.667	93	31	0	1	93	1	93	1.33e-42	134
MS.gene003625.t1	MTR_4g072580	69.231	91	22	1	1	91	1	85	7.85e-42	132
MS.gene003625.t1	MTR_4g072490	70.330	91	21	1	1	91	1	85	1.92e-41	131
MS.gene003625.t1	MTR_3g084260	64.516	93	33	0	1	93	1	93	1.93e-41	131
MS.gene003625.t1	MTR_5g008370	69.474	95	22	2	1	92	1	91	3.16e-41	132
MS.gene003625.t1	MTR_4g072740	70.330	91	21	1	1	91	1	85	3.59e-41	130
MS.gene003625.t1	MTR_4g072660	67.742	93	24	1	1	93	1	87	3.68e-41	130
MS.gene003625.t1	MTR_4g072290	67.742	93	16	1	1	93	1	79	7.59e-41	129
MS.gene003625.t1	MTR_4g072830	68.889	90	25	1	1	90	1	87	1.41e-40	129
MS.gene003625.t1	MTR_4g072330	63.736	91	30	1	1	91	1	88	2.20e-40	128
MS.gene003625.t1	MTR_5g008360	72.152	79	22	0	15	93	5	83	9.41e-40	127
MS.gene003625.t1	MTR_4g072465	67.033	91	25	1	1	91	1	86	1.02e-39	127
MS.gene003625.t1	MTR_4g072470	68.132	91	23	1	1	91	1	85	1.27e-39	126
MS.gene003625.t1	MTR_4g072940	69.565	92	27	1	3	93	33	124	2.42e-39	127
MS.gene003625.t1	MTR_4g072610	68.132	91	22	1	1	91	1	84	2.14e-38	123
MS.gene003625.t1	MTR_4g072630	64.835	91	27	1	1	91	1	86	3.22e-38	123
MS.gene003625.t1	MTR_3g084210	67.742	93	29	1	1	93	1	92	5.56e-38	122
MS.gene003625.t1	MTR_3g084190	69.892	93	27	1	1	93	1	92	1.32e-37	121
MS.gene003625.t1	MTR_4g072820	66.304	92	23	2	1	91	1	85	1.43e-37	121
MS.gene003625.t1	MTR_4g072540	67.033	91	25	1	1	91	1	86	1.92e-37	121
MS.gene003625.t1	MTR_4g072380	68.478	92	22	2	1	91	1	86	2.60e-37	120
MS.gene003625.t1	MTR_4g072600	65.909	88	24	1	1	88	1	82	2.81e-37	120
MS.gene003625.t1	MTR_4g072650	64.835	91	25	1	1	91	1	84	8.73e-37	119
MS.gene003625.t1	MTR_8g461420	68.132	91	28	1	1	91	1	90	9.11e-37	119
MS.gene003625.t1	MTR_3g084230	68.132	91	28	1	1	91	1	90	2.21e-36	118
MS.gene003625.t1	MTR_4g072670	65.934	91	26	1	1	91	1	86	2.85e-36	118
MS.gene003625.t1	MTR_4g072550	70.000	80	23	1	15	93	24	103	5.47e-36	117
MS.gene003625.t1	MTR_3g084160	66.667	93	30	1	1	93	1	92	1.09e-35	117
MS.gene003625.t1	MTR_4g072720	65.934	91	26	1	1	91	1	86	1.38e-35	116
MS.gene003625.t1	MTR_3g110045	68.132	91	28	1	3	93	62	151	4.27e-35	117
MS.gene003625.t1	MTR_4g072510	63.736	91	28	1	1	91	1	86	7.74e-35	114
MS.gene003625.t1	MTR_4g072590	65.934	91	25	1	1	91	1	85	4.30e-34	112
MS.gene003625.t1	MTR_5g008350	66.250	80	21	1	1	80	1	74	8.33e-33	108
MS.gene003625.t1	MTR_3g084200	67.123	73	23	1	1	73	1	72	7.74e-32	107
MS.gene003625.t1	MTR_4g072690	62.637	91	28	1	1	91	1	85	1.87e-31	105
MS.gene003625.t1	MTR_4g072560	53.061	98	39	3	1	91	1	98	1.98e-31	106
MS.gene003625.t1	MTR_4g072910	56.383	94	35	1	4	91	7	100	2.85e-31	105
MS.gene003625.t1	MTR_4g072450	62.637	91	28	1	1	91	1	85	1.30e-30	103
MS.gene003625.t1	MTR_4g072980	51.579	95	44	2	1	93	1	95	6.93e-30	102
MS.gene003625.t1	MTR_3g110035	60.256	78	30	1	16	93	62	138	5.95e-28	98.6
MS.gene003625.t1	MTR_4g072770	66.667	66	22	0	26	91	15	80	8.78e-28	96.7
MS.gene003625.t1	MTR_4g072750	61.333	75	26	2	1	73	1	74	5.01e-27	94.7
MS.gene003625.t1	MTR_8g461400	53.763	93	16	2	1	93	1	66	5.97e-27	94.0
MS.gene003625.t1	MTR_3g113310	61.538	65	24	1	24	88	40	103	9.21e-27	94.7
MS.gene003625.t1	MTR_3g117640	59.420	69	27	1	25	92	33	101	1.11e-26	94.4
MS.gene003625.t1	MTR_6g077850	47.727	88	45	1	4	91	13	99	1.85e-26	94.0
MS.gene003625.t1	MTR_3g117610	63.077	65	23	1	24	88	43	106	3.84e-26	93.2
MS.gene003625.t1	MTR_4g072190	55.696	79	31	2	10	88	23	97	7.33e-26	92.4
MS.gene003625.t1	MTR_4g072280	56.000	75	33	0	1	75	1	75	7.78e-26	91.7
MS.gene003625.t1	MTR_4g072930	49.412	85	39	1	11	91	26	110	7.89e-24	87.4
MS.gene003625.t1	MTR_5g021820	50.000	84	38	2	8	88	19	101	1.21e-23	86.7
MS.gene003625.t1	MTR_8g076040	59.375	64	25	1	25	88	40	102	2.22e-23	86.3
MS.gene003625.t1	MTR_4g072840	50.562	89	11	3	1	88	1	57	3.76e-20	76.6
MS.gene003625.t1	MTR_2g043960	54.839	62	27	1	25	86	75	135	1.29e-17	73.2
MS.gene003625.t1	MTR_4g124750	53.125	64	29	1	25	88	68	130	1.59e-17	72.8
MS.gene003625.t1	MTR_1g024085	51.429	70	30	2	15	84	29	94	9.50e-17	70.5
MS.gene003625.t1	MTR_4g005310	49.296	71	32	2	17	86	56	123	1.76e-16	69.7
MS.gene003625.t1	MTR_1g009150	48.529	68	34	1	19	86	64	130	2.46e-15	67.4
MS.gene003625.t1	MTR_3g092220	45.714	70	35	2	17	84	24	92	4.81e-15	65.1
MS.gene003625.t1	MTR_7g118010	50.794	63	28	2	26	86	23	84	5.54e-15	64.7
MS.gene003625.t1	MTR_3g109160	43.373	83	46	1	10	92	53	134	8.48e-15	65.9
MS.gene003625.t1	MTR_1g094750	50.000	62	30	1	25	86	49	109	9.05e-15	64.7
MS.gene003625.t1	MTR_1g063950	44.928	69	37	1	15	83	37	104	2.97e-14	63.5
MS.gene003625.t1	MTR_0388s0020	44.444	72	36	2	20	88	69	139	3.96e-14	63.5
MS.gene003625.t1	MTR_1g061570	41.176	85	46	2	8	92	4	84	4.07e-14	63.2
MS.gene003625.t1	MTR_4g005320	47.541	61	31	1	26	86	70	129	4.97e-14	63.9
MS.gene003625.t1	MTR_4g025830	45.588	68	33	2	26	90	79	145	5.39e-14	63.5
MS.gene003625.t1	MTR_1g059770	42.857	63	35	1	26	88	49	110	1.01e-13	62.0
MS.gene003625.t1	MTR_8g026730	46.032	63	31	2	26	86	27	88	2.13e-13	60.8
MS.gene003625.t1	MTR_4g072160	48.438	64	32	1	23	86	34	96	2.74e-13	61.2
MS.gene003625.t1	MTR_8g461210	39.560	91	51	3	4	92	14	102	4.40e-13	60.1
MS.gene003625.t1	MTR_7g101740	45.312	64	34	1	25	88	39	101	1.31e-12	58.9
MS.gene003625.t1	MTR_7g104940	41.667	60	34	1	29	88	53	111	3.44e-12	58.2
MS.gene003625.t1	MTR_2g095430	42.667	75	36	3	10	78	27	100	3.87e-12	58.2
MS.gene003625.t1	MTR_3g098970	32.099	81	53	2	13	93	41	119	9.36e-12	57.4
MS.gene003625.t1	MTR_7g104950	34.722	72	46	1	17	88	41	111	2.21e-11	56.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003625.t1	AT5G18020	67.105	76	24	1	17	91	15	90	8.03e-34	112
MS.gene003625.t1	AT4G38840	62.353	85	31	1	8	91	15	99	3.77e-33	110
MS.gene003625.t1	AT5G18030	68.919	74	22	1	19	91	15	88	1.87e-32	108
MS.gene003625.t1	AT5G18060	65.789	76	25	1	17	91	15	90	1.93e-32	108
MS.gene003625.t1	AT5G18080	65.789	76	25	1	17	91	15	90	3.46e-32	108
MS.gene003625.t1	AT5G18010	64.474	76	26	1	17	91	15	90	1.39e-31	106
MS.gene003625.t1	AT5G18050	63.158	76	27	1	17	91	15	90	1.47e-31	106
MS.gene003625.t1	AT2G21200	67.606	71	22	1	21	90	16	86	9.84e-31	104
MS.gene003625.t1	AT3G03840	67.123	73	22	1	22	92	23	95	2.45e-30	103
MS.gene003625.t1	AT2G21210	50.526	95	43	2	1	91	1	95	1.40e-29	101
MS.gene003625.t1	AT4G38825	65.278	72	24	1	21	91	18	89	1.66e-29	101
MS.gene003625.t1	AT2G21210	60.811	74	27	1	20	91	89	162	1.10e-28	101
MS.gene003625.t1	AT3G03830	57.955	88	30	2	11	91	5	92	1.60e-28	99.0
MS.gene003625.t1	AT3G03820	60.811	74	26	1	22	92	23	96	2.71e-28	98.2
MS.gene003625.t1	AT3G03850	67.647	68	20	1	27	92	26	93	7.43e-28	97.1
MS.gene003625.t1	AT4G38850	63.380	71	23	1	22	89	17	87	1.12e-27	96.7
MS.gene003625.t1	AT4G34770	59.211	76	29	1	19	92	28	103	2.74e-27	96.3
MS.gene003625.t1	AT4G38860	63.077	65	24	0	24	88	38	102	2.04e-26	94.0
MS.gene003625.t1	AT4G34810	58.333	72	25	2	17	83	38	109	2.28e-25	91.7
MS.gene003625.t1	AT4G34800	50.000	86	35	2	1	83	1	81	2.76e-25	90.9
MS.gene003625.t1	AT1G75580	61.538	65	24	1	24	88	42	105	2.99e-25	90.9
MS.gene003625.t1	AT2G21220	52.439	82	35	2	10	88	21	101	4.05e-25	90.5
MS.gene003625.t1	AT4G34760	61.538	65	24	1	24	88	41	104	4.91e-25	90.5
MS.gene003625.t1	AT4G13790	53.521	71	31	1	21	89	20	90	1.97e-24	88.6
MS.gene003625.t1	AT1G19830	55.882	68	29	1	21	88	43	109	2.57e-22	84.0
MS.gene003625.t1	AT2G16580	56.923	65	27	1	24	88	42	105	3.03e-22	83.6
MS.gene003625.t1	AT4G34780	45.161	93	45	2	4	90	3	95	5.07e-22	82.8
MS.gene003625.t1	AT4G36110	56.061	66	28	1	25	90	39	103	1.82e-21	81.3
MS.gene003625.t1	AT2G18010	54.545	66	29	1	25	90	47	111	2.08e-20	79.0
MS.gene003625.t1	AT4G34790	52.308	65	29	1	26	88	39	103	4.57e-20	77.8
MS.gene003625.t1	AT3G20220	49.351	77	37	2	15	90	36	111	6.12e-20	77.8
MS.gene003625.t1	AT5G66260	44.318	88	43	2	4	91	17	98	1.29e-18	73.9
MS.gene003625.t1	AT3G43120	53.226	62	28	1	25	86	78	138	7.78e-18	73.6
MS.gene003625.t1	AT5G20810	54.839	62	27	1	25	86	78	138	2.74e-17	72.4
MS.gene003625.t1	AT5G20810	54.839	62	27	1	25	86	78	138	5.73e-17	72.0
MS.gene003625.t1	AT3G51200	50.000	64	30	2	21	83	34	96	8.99e-16	67.0
MS.gene003625.t1	AT2G46690	41.667	84	44	3	13	92	10	92	1.22e-15	67.0
MS.gene003625.t1	AT4G34750	45.312	64	34	1	25	88	36	98	4.40e-15	66.2
MS.gene003625.t1	AT4G34750	45.312	64	34	1	25	88	36	98	4.40e-15	66.2
MS.gene003625.t1	AT4G31320	52.459	61	28	1	26	86	80	139	4.70e-15	67.0
MS.gene003625.t1	AT2G24400	54.098	61	27	1	26	86	64	123	2.52e-14	64.7
MS.gene003625.t1	AT1G75590	42.353	85	44	3	4	84	16	99	3.36e-14	63.9
MS.gene003625.t1	AT3G61900	44.286	70	35	2	25	91	29	97	4.33e-14	63.5
MS.gene003625.t1	AT5G10990	48.333	60	30	1	25	84	40	98	1.03e-13	62.8
MS.gene003625.t1	AT2G45210	41.096	73	39	2	21	90	74	145	1.41e-13	62.8
MS.gene003625.t1	AT1G19840	48.529	68	32	2	19	84	32	98	1.83e-13	62.0
MS.gene003625.t1	AT2G37030	47.458	59	30	1	25	83	48	105	9.53e-13	59.7
MS.gene003625.t1	AT4G00880	50.794	63	28	2	26	86	28	89	9.84e-13	59.7
MS.gene003625.t1	AT3G60690	41.096	73	39	2	22	91	84	155	2.58e-12	59.3
MS.gene003625.t1	AT2G36210	38.356	73	45	0	16	88	44	116	2.66e-12	58.5
MS.gene003625.t1	AT4G09530	40.845	71	36	3	17	84	22	89	3.40e-11	55.1

Find 24 sgRNAs with CRISPR-Local

Find 25 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGTCAAGTTGAGGAAGAGTT+TGG	0.373802	4.1:-31068462	MS.gene003625:CDS
CATATAACTTCTCGCTTCAA+TGG	0.376587	4.1:-31068384	MS.gene003625:CDS
CTCAGCAAATATTGAAATGA+AGG	0.388446	4.1:+31068483	None:intergenic
GCAAATATTGAAATGAAGGT+TGG	0.498727	4.1:+31068487	None:intergenic
GGATATCTTGCAGTATATGT+TGG	0.514243	4.1:-31068552	MS.gene003625:CDS
GGTTGGCTCAAGTATGATAC+GGG	0.521678	4.1:+31068504	None:intergenic
AAAAGCTGTGGACGTGCCAA+AGG	0.523365	4.1:-31068574	MS.gene003625:CDS
AGGTTGGCTCAAGTATGATA+CGG	0.529579	4.1:+31068503	None:intergenic
TGGCCTCACCATTCCTTGCA+CGG	0.538434	4.1:-31068421	MS.gene003625:CDS
GACATCTTCCGTGCAAGGAA+TGG	0.540062	4.1:+31068413	None:intergenic
TATACTGCAAGATATCCCTT+TGG	0.554191	4.1:+31068558	None:intergenic
GATGTCTTTCTGATGATACC+AGG	0.554515	4.1:+31068621	None:intergenic
TGAAAGACATCTTCCGTGCA+AGG	0.572644	4.1:+31068408	None:intergenic
GTTTGGATATGATCATCCGA+TGG	0.574706	4.1:-31068445	MS.gene003625:CDS
AAAGCTGTGGACGTGCCAAA+GGG	0.577804	4.1:-31068573	MS.gene003625:CDS
ATATTTGCTGAGTCAAGTTG+AGG	0.590103	4.1:-31068472	MS.gene003625:CDS
CCGATCAGCTTCAAAAGCTG+TGG	0.594595	4.1:-31068586	MS.gene003625:CDS
GGATATGATCATCCGATGGG+TGG	0.619354	4.1:-31068441	MS.gene003625:CDS
GGAATGGTGAGGCCACCCAT+CGG	0.642919	4.1:+31068429	None:intergenic
TTTGGATATGATCATCCGAT+GGG	0.647893	4.1:-31068444	MS.gene003625:CDS
ATGTCTTTCTGATGATACCA+GGG	0.654843	4.1:+31068622	None:intergenic
CTTCCGTGCAAGGAATGGTG+AGG	0.671810	4.1:+31068418	None:intergenic
GTTGGCTCAAGTATGATACG+GGG	0.770839	4.1:+31068505	None:intergenic
ATGTTGGAGAGAAACAGACA+CGG	0.798276	4.1:-31068536	MS.gene003625:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	CTCAGCAAATATTGAAATGA+AGG	+	chr4.1:31068533-31068552	None:intergenic	30.0%
	GCAAATATTGAAATGAAGGT+TGG	+	chr4.1:31068529-31068548	None:intergenic	30.0%
	ATGTCTTTCTGATGATACCA+GGG	+	chr4.1:31068394-31068413	None:intergenic	35.0%
	CATATAACTTCTCGCTTCAA+TGG	-	chr4.1:31068629-31068648	MS.gene003625:CDS	35.0%
	GGATATCTTGCAGTATATGT+TGG	-	chr4.1:31068461-31068480	MS.gene003625:CDS	35.0%
	TATACTGCAAGATATCCCTT+TGG	+	chr4.1:31068458-31068477	None:intergenic	35.0%
	TTTGGATATGATCATCCGAT+GGG	-	chr4.1:31068569-31068588	MS.gene003625:CDS	35.0%
!	ATATTTGCTGAGTCAAGTTG+AGG	-	chr4.1:31068541-31068560	MS.gene003625:CDS	35.0%
	ATGTTGGAGAGAAACAGACA+CGG	-	chr4.1:31068477-31068496	MS.gene003625:CDS	40.0%
	GATGTCTTTCTGATGATACC+AGG	+	chr4.1:31068395-31068414	None:intergenic	40.0%
	GTTTGGATATGATCATCCGA+TGG	-	chr4.1:31068568-31068587	MS.gene003625:CDS	40.0%
!	AGGTTGGCTCAAGTATGATA+CGG	+	chr4.1:31068513-31068532	None:intergenic	40.0%
!!	AGTCAAGTTGAGGAAGAGTT+TGG	-	chr4.1:31068551-31068570	MS.gene003625:CDS	40.0%
	TGAAAGACATCTTCCGTGCA+AGG	+	chr4.1:31068608-31068627	None:intergenic	45.0%
!	GGTTGGCTCAAGTATGATAC+GGG	+	chr4.1:31068512-31068531	None:intergenic	45.0%
!	GTTGGCTCAAGTATGATACG+GGG	+	chr4.1:31068511-31068530	None:intergenic	45.0%
!!!	CCACAGCTTTTGAAGCTGAT+CGG	+	chr4.1:31068430-31068449	None:intergenic	45.0%
	AAAAGCTGTGGACGTGCCAA+AGG	-	chr4.1:31068439-31068458	MS.gene003625:CDS	50.0%
	AAAGCTGTGGACGTGCCAAA+GGG	-	chr4.1:31068440-31068459	MS.gene003625:CDS	50.0%
	CCGATCAGCTTCAAAAGCTG+TGG	-	chr4.1:31068427-31068446	MS.gene003625:CDS	50.0%
	GACATCTTCCGTGCAAGGAA+TGG	+	chr4.1:31068603-31068622	None:intergenic	50.0%
	GGATATGATCATCCGATGGG+TGG	-	chr4.1:31068572-31068591	MS.gene003625:CDS	50.0%
	CTTCCGTGCAAGGAATGGTG+AGG	+	chr4.1:31068598-31068617	None:intergenic	55.0%
	TGGCCTCACCATTCCTTGCA+CGG	-	chr4.1:31068592-31068611	MS.gene003625:CDS	55.0%
	GGAATGGTGAGGCCACCCAT+CGG	+	chr4.1:31068587-31068606	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	31068377	31068658	31068377	ID=MS.gene003625
chr4.1	mRNA	31068377	31068658	31068377	ID=MS.gene003625.t1;Parent=MS.gene003625
chr4.1	exon	31068377	31068658	31068377	ID=MS.gene003625.t1.exon1;Parent=MS.gene003625.t1
chr4.1	CDS	31068377	31068658	31068377	ID=cds.MS.gene003625.t1;Parent=MS.gene003625.t1

Gene Sequence	>MS.gene003625 ATGGGTTTTCGTTTCCCTGGTATCATCAGAAAGACATCATTTTCTGCAAACCGATCAGCTTCAAAAGCTGTGGACGTGCCAAAGGGATATCTTGCAGTATATGTTGGAGAGAAACAGACACGGTATGTGATCCCCGTATCATACTTGAGCCAACCTTCATTTCAATATTTGCTGAGTCAAGTTGAGGAAGAGTTTGGATATGATCATCCGATGGGTGGCCTCACCATTCCTTGCACGGAAGATGTCTTTCAACATATAACTTCTCGCTTCAATGGACTATGA
Protein sequence	>MS.gene003625.t1 MGFRFPGIIRKTSFSANRSASKAVDVPKGYLAVYVGEKQTRYVIPVSYLSQPSFQYLLSQVEEEFGYDHPMGGLTIPCTEDVFQHITSRFNGL