AlfalfaGEDB | MS.gene045362

M. sativa cultivar XinJiangDaYe / MS.gene045362

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045362.t1	AES71920.1	97.8	92	2	0	1	92	1	92	4.50E-44	186.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045362.t1	P33083	73.6	91	22	2	1	90	1	90	3.7e-31	135.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045362.t1	G7JAQ3	97.8	92	2	0	1	92	1	92	3.2e-44	186.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene045362	MS.gene062958	PPI
MS.gene50689	MS.gene045362	PPI
MS.gene045362	MS.gene057798	PPI
MS.gene045362	MS.gene003612	PPI
MS.gene045362	MS.gene057794	PPI
MS.gene045362	MS.gene003629	PPI
MS.gene045362	MS.gene062983	PPI
MS.gene50674	MS.gene045362	PPI
MS.gene045362	MS.gene062967	PPI
MS.gene045362	MS.gene23367	PPI
MS.gene045362	MS.gene062940	PPI
MS.gene045362	MS.gene003595	PPI
MS.gene057806	MS.gene045362	PPI
MS.gene045362	MS.gene062959	PPI
MS.gene057809	MS.gene045362	PPI
MS.gene045362	MS.gene50664	PPI
MS.gene045362	MS.gene057785	PPI
MS.gene045362	MS.gene50773	PPI
MS.gene045362	MS.gene50670	PPI
MS.gene045362	MS.gene50653	PPI
MS.gene045362	MS.gene003598	PPI
MS.gene045362	MS.gene70685	PPI
MS.gene045362	MS.gene50690	PPI
MS.gene003597	MS.gene045362	PPI
MS.gene003593	MS.gene045362	PPI
MS.gene045362	MS.gene062941	PPI
MS.gene062972	MS.gene045362	PPI
MS.gene003628	MS.gene045362	PPI
MS.gene003580	MS.gene045362	PPI
MS.gene003582	MS.gene045362	PPI
MS.gene045362	MS.gene057799	PPI
MS.gene045362	MS.gene50688	PPI
MS.gene045362	MS.gene003630	PPI
MS.gene057800	MS.gene045362	PPI
MS.gene045362	MS.gene057779	PPI
MS.gene045362	MS.gene062980	PPI
MS.gene045362	MS.gene003610	PPI
MS.gene50772	MS.gene045362	PPI
MS.gene045362	MS.gene50771	PPI
MS.gene062966	MS.gene045362	PPI
MS.gene045362	MS.gene022358	PPI
MS.gene045362	MS.gene057802	PPI
MS.gene045362	MS.gene057796	PPI
MS.gene057783	MS.gene045362	PPI
MS.gene062978	MS.gene045362	PPI
MS.gene045362	MS.gene50682	PPI
MS.gene045362	MS.gene057780	PPI
MS.gene045362	MS.gene057788	PPI
MS.gene50662	MS.gene045362	PPI
MS.gene50683	MS.gene045362	PPI
MS.gene045362	MS.gene062944	PPI
MS.gene045362	MS.gene50658	PPI
MS.gene057807	MS.gene045362	PPI
MS.gene045362	MS.gene50655	PPI
MS.gene045362	MS.gene28863	PPI
MS.gene045362	MS.gene50685	PPI
MS.gene045362	MS.gene003613	PPI
MS.gene045362	MS.gene003584	PPI
MS.gene045362	MS.gene057791	PPI
MS.gene003585	MS.gene045362	PPI
MS.gene057816	MS.gene045362	PPI
MS.gene003603	MS.gene045362	PPI
MS.gene062946	MS.gene045362	PPI
MS.gene045362	MS.gene062965	PPI
MS.gene045362	MS.gene50666	PPI
MS.gene045362	MS.gene062953	PPI
MS.gene045362	MS.gene23369	PPI
MS.gene062954	MS.gene045362	PPI
MS.gene045362	MS.gene062986	PPI
MS.gene50657	MS.gene045362	PPI
MS.gene045362	MS.gene50770	PPI
MS.gene045362	MS.gene062987	PPI
MS.gene045362	MS.gene057811	PPI
MS.gene045362	MS.gene057817	PPI
MS.gene062962	MS.gene045362	PPI
MS.gene062975	MS.gene045362	PPI
MS.gene045362	MS.gene70684	PPI
MS.gene045362	MS.gene062964	PPI
MS.gene77525	MS.gene045362	PPI
MS.gene045362	MS.gene057777	PPI
MS.gene003576	MS.gene045362	PPI
MS.gene045362	MS.gene062945	PPI
MS.gene062969	MS.gene045362	PPI
MS.gene045362	MS.gene057804	PPI
MS.gene057782	MS.gene045362	PPI
MS.gene045362	MS.gene003579	PPI
MS.gene003606	MS.gene045362	PPI
MS.gene045362	MS.gene062989	PPI
MS.gene045362	MS.gene50651	PPI
MS.gene003626	MS.gene045362	PPI
MS.gene045362	MS.gene003607	PPI
MS.gene045362	MS.gene50656	PPI
MS.gene045362	MS.gene50686	PPI
MS.gene045362	MS.gene70683	PPI
MS.gene062970	MS.gene045362	PPI
MS.gene057805	MS.gene045362	PPI
MS.gene062942	MS.gene045362	PPI
MS.gene045362	MS.gene062985	PPI
MS.gene045362	MS.gene057784	PPI
MS.gene003605	MS.gene045362	PPI
MS.gene045362	MS.gene50669	PPI
MS.gene50673	MS.gene045362	PPI
MS.gene045362	MS.gene003622	PPI
MS.gene062971	MS.gene045362	PPI
MS.gene23373	MS.gene045362	PPI
MS.gene045362	MS.gene003599	PPI
MS.gene045362	MS.gene23368	PPI
MS.gene045362	MS.gene50660	PPI
MS.gene045362	MS.gene003623	PPI
MS.gene045362	MS.gene50668	PPI
MS.gene045362	MS.gene003581	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045362.t1	MTR_3g084170	97.826	92	2	0	1	92	1	92	1.03e-64	190
MS.gene045362.t1	MTR_3g084240	96.739	92	3	0	1	92	1	92	9.75e-64	187
MS.gene045362.t1	MTR_3g084220	93.478	92	6	0	1	92	1	92	2.85e-61	181
MS.gene045362.t1	MTR_3g110038	92.391	92	7	0	1	92	1	92	2.77e-60	179
MS.gene045362.t1	MTR_4g050700	88.172	93	10	1	1	92	1	93	1.25e-57	172
MS.gene045362.t1	MTR_2g012410	88.172	93	10	1	1	92	1	93	1.25e-57	172
MS.gene045362.t1	MTR_3g084150	87.097	93	10	2	1	92	1	92	3.16e-56	168
MS.gene045362.t1	MTR_8g461410	86.022	93	11	2	1	92	1	92	5.59e-56	168
MS.gene045362.t1	MTR_3g084180	86.022	93	11	2	1	92	1	92	2.78e-55	166
MS.gene045362.t1	MTR_3g110032	83.871	93	14	1	1	92	1	93	1.86e-53	161
MS.gene045362.t1	MTR_3g084260	83.871	93	14	1	1	92	1	93	7.56e-53	160
MS.gene045362.t1	MTR_3g110042	85.227	88	11	2	1	87	1	87	1.68e-50	154
MS.gene045362.t1	MTR_4g072250	77.419	93	19	2	1	92	1	92	2.73e-49	151
MS.gene045362.t1	MTR_4g072880	74.194	93	23	1	1	92	1	93	8.52e-49	150
MS.gene045362.t1	MTR_4g072310	74.194	93	23	1	1	92	1	93	2.42e-48	149
MS.gene045362.t1	MTR_3g117630	78.889	90	18	1	4	92	3	92	1.19e-47	147
MS.gene045362.t1	MTR_4g072270	73.118	93	24	1	1	92	1	93	3.67e-47	145
MS.gene045362.t1	MTR_3g084200	95.833	72	3	0	1	72	1	72	7.61e-47	145
MS.gene045362.t1	MTR_4g072230	75.269	93	20	2	1	92	1	91	3.47e-46	143
MS.gene045362.t1	MTR_4g072740	74.444	90	18	1	1	90	1	85	2.23e-45	140
MS.gene045362.t1	MTR_4g072370	74.444	90	21	1	1	90	1	88	3.12e-45	140
MS.gene045362.t1	MTR_4g072860	72.043	93	25	1	1	92	1	93	3.23e-45	140
MS.gene045362.t1	MTR_4g072330	73.333	90	22	1	1	90	1	88	4.63e-45	140
MS.gene045362.t1	MTR_4g072870	70.330	91	26	1	1	90	1	91	1.15e-44	139
MS.gene045362.t1	MTR_4g072470	73.333	90	19	1	1	90	1	85	1.44e-44	139
MS.gene045362.t1	MTR_4g072490	71.111	90	21	1	1	90	1	85	1.59e-44	139
MS.gene045362.t1	MTR_4g072500	73.118	93	23	2	1	92	1	92	1.94e-44	139
MS.gene045362.t1	MTR_4g072240	70.330	91	26	1	1	90	1	91	3.59e-44	138
MS.gene045362.t1	MTR_4g072480	68.478	92	29	0	1	92	1	92	5.74e-44	137
MS.gene045362.t1	MTR_4g072300	70.330	91	26	1	1	90	1	91	1.26e-43	136
MS.gene045362.t1	MTR_3g084250	70.968	93	25	2	1	92	1	92	1.72e-43	136
MS.gene045362.t1	MTR_4g072620	67.391	92	30	0	1	92	1	92	2.01e-43	136
MS.gene045362.t1	MTR_4g072260	68.817	93	28	1	1	92	1	93	2.11e-43	136
MS.gene045362.t1	MTR_4g072890	70.330	91	26	1	1	90	1	91	2.65e-43	135
MS.gene045362.t1	MTR_4g072220	69.892	93	27	1	1	92	1	93	2.90e-43	135
MS.gene045362.t1	MTR_4g072580	71.111	90	21	1	1	90	1	85	3.81e-43	135
MS.gene045362.t1	MTR_4g072830	74.157	89	21	1	1	89	1	87	4.75e-43	135
MS.gene045362.t1	MTR_4g072680	67.391	92	30	0	1	92	1	92	4.82e-43	135
MS.gene045362.t1	MTR_4g072850	72.340	94	24	1	1	92	1	94	6.45e-43	135
MS.gene045362.t1	MTR_4g072570	68.478	92	29	0	1	92	1	92	1.24e-42	134
MS.gene045362.t1	MTR_4g072640	73.626	91	22	2	1	90	1	90	1.84e-42	134
MS.gene045362.t1	MTR_4g072730	67.033	91	30	0	1	91	1	91	1.99e-42	134
MS.gene045362.t1	MTR_4g072630	70.000	90	23	1	1	90	1	86	3.07e-42	133
MS.gene045362.t1	MTR_4g072530	71.429	91	24	2	1	90	1	90	4.08e-42	132
MS.gene045362.t1	MTR_4g072610	72.222	90	19	2	1	90	1	84	6.63e-42	132
MS.gene045362.t1	MTR_4g072465	68.889	90	24	1	1	90	1	86	8.25e-42	132
MS.gene045362.t1	MTR_4g072460	65.217	92	32	0	1	92	1	92	2.27e-41	131
MS.gene045362.t1	MTR_4g072650	72.222	90	19	2	1	90	1	84	5.76e-41	130
MS.gene045362.t1	MTR_3g084210	66.304	92	31	0	1	92	1	92	2.27e-40	128
MS.gene045362.t1	MTR_4g072660	66.304	92	26	1	1	92	1	87	3.47e-40	128
MS.gene045362.t1	MTR_4g072670	68.889	90	24	1	1	90	1	86	9.54e-40	127
MS.gene045362.t1	MTR_4g072540	71.111	90	22	1	1	90	1	86	1.55e-39	126
MS.gene045362.t1	MTR_4g072380	70.000	90	23	1	1	90	1	86	1.68e-39	126
MS.gene045362.t1	MTR_4g072510	68.889	90	24	1	1	90	1	86	5.71e-39	125
MS.gene045362.t1	MTR_4g072820	68.889	90	23	2	1	90	1	85	7.51e-39	124
MS.gene045362.t1	MTR_4g072720	68.889	90	24	1	1	90	1	86	7.84e-39	124
MS.gene045362.t1	MTR_4g072600	68.966	87	22	1	1	87	1	82	8.34e-39	124
MS.gene045362.t1	MTR_3g084190	64.130	92	33	0	1	92	1	92	1.42e-38	124
MS.gene045362.t1	MTR_5g008360	78.378	74	16	0	19	92	10	83	2.43e-38	123
MS.gene045362.t1	MTR_4g072590	68.889	90	23	1	1	90	1	85	4.50e-38	122
MS.gene045362.t1	MTR_8g461420	64.444	90	32	0	1	90	1	90	4.90e-38	122
MS.gene045362.t1	MTR_4g072940	69.565	92	26	1	3	92	33	124	6.48e-38	123
MS.gene045362.t1	MTR_3g084230	64.444	90	32	0	1	90	1	90	1.79e-37	121
MS.gene045362.t1	MTR_8g461400	68.478	92	3	1	1	92	1	66	2.47e-37	120
MS.gene045362.t1	MTR_3g084160	63.043	92	34	0	1	92	1	92	3.41e-37	120
MS.gene045362.t1	MTR_5g008370	65.957	94	26	2	1	91	1	91	4.12e-37	122
MS.gene045362.t1	MTR_3g110045	65.556	90	31	0	3	92	62	151	1.30e-36	120
MS.gene045362.t1	MTR_4g072690	67.778	90	24	1	1	90	1	85	5.32e-36	117
MS.gene045362.t1	MTR_4g072550	61.957	92	32	1	4	92	12	103	1.96e-35	116
MS.gene045362.t1	MTR_5g008350	67.089	79	21	1	1	79	1	74	2.67e-35	115
MS.gene045362.t1	MTR_4g072450	66.667	90	25	1	1	90	1	85	3.28e-35	115
MS.gene045362.t1	MTR_4g072980	56.842	95	38	2	1	92	1	95	4.43e-34	112
MS.gene045362.t1	MTR_4g072560	53.061	98	38	3	1	90	1	98	8.66e-32	107
MS.gene045362.t1	MTR_4g072770	72.727	66	18	0	25	90	15	80	1.71e-31	105
MS.gene045362.t1	MTR_4g072290	59.783	92	24	2	1	92	1	79	7.50e-31	104
MS.gene045362.t1	MTR_4g072910	64.789	71	25	0	20	90	30	100	3.15e-30	103
MS.gene045362.t1	MTR_3g117640	49.505	101	41	2	1	91	1	101	9.81e-30	102
MS.gene045362.t1	MTR_3g110035	68.182	66	21	0	27	92	73	138	2.03e-28	99.8
MS.gene045362.t1	MTR_4g072280	62.667	75	27	1	1	74	1	75	1.69e-26	93.2
MS.gene045362.t1	MTR_4g072750	64.865	74	22	2	1	71	1	73	1.41e-25	91.3
MS.gene045362.t1	MTR_4g072930	49.412	85	38	2	11	90	26	110	2.49e-24	88.6
MS.gene045362.t1	MTR_3g113310	58.462	65	26	1	23	87	40	103	3.00e-24	88.2
MS.gene045362.t1	MTR_3g117610	60.000	65	25	1	23	87	43	106	2.35e-23	86.3
MS.gene045362.t1	MTR_6g077850	53.731	67	31	0	24	90	33	99	6.40e-23	84.7
MS.gene045362.t1	MTR_4g072190	49.398	83	40	2	5	87	17	97	1.13e-22	84.3
MS.gene045362.t1	MTR_4g072840	54.023	87	10	4	1	87	1	57	2.64e-20	77.0
MS.gene045362.t1	MTR_2g043960	54.839	62	27	1	24	85	75	135	2.28e-19	77.4
MS.gene045362.t1	MTR_8g076040	53.125	64	29	1	24	87	40	102	2.83e-19	75.9
MS.gene045362.t1	MTR_5g021820	53.125	64	29	1	24	87	39	101	3.07e-19	75.5
MS.gene045362.t1	MTR_4g124750	53.125	64	29	1	24	87	68	130	6.38e-19	76.3
MS.gene045362.t1	MTR_1g094750	48.235	85	39	2	5	85	26	109	3.97e-18	73.2
MS.gene045362.t1	MTR_1g009150	56.452	62	26	1	24	85	70	130	9.26e-18	73.6
MS.gene045362.t1	MTR_4g005310	44.737	76	41	1	11	85	48	123	7.01e-17	70.9
MS.gene045362.t1	MTR_3g109160	52.239	67	31	1	25	91	69	134	1.15e-15	68.2
MS.gene045362.t1	MTR_4g005320	50.820	61	29	1	25	85	70	129	1.27e-15	67.8
MS.gene045362.t1	MTR_8g461210	47.143	70	34	2	24	91	34	102	1.54e-14	63.9
MS.gene045362.t1	MTR_1g024085	50.847	59	28	1	24	82	36	93	1.77e-14	64.3
MS.gene045362.t1	MTR_3g098970	33.750	80	52	1	13	92	41	119	2.26e-14	64.3
MS.gene045362.t1	MTR_7g118010	49.206	63	29	2	25	85	23	84	3.35e-14	62.8
MS.gene045362.t1	MTR_4g072160	50.794	63	28	2	24	85	36	96	3.98e-14	63.5
MS.gene045362.t1	MTR_3g105900	68.293	41	13	0	24	64	1171	1211	6.28e-14	65.9
MS.gene045362.t1	MTR_0388s0020	38.750	80	45	2	11	87	61	139	6.89e-14	63.2
MS.gene045362.t1	MTR_3g092220	43.478	69	36	2	16	82	24	91	1.11e-13	61.6
MS.gene045362.t1	MTR_4g025830	43.284	67	34	2	25	88	79	144	1.54e-13	62.4
MS.gene045362.t1	MTR_4g021810	46.835	79	38	3	5	82	8	83	1.78e-13	60.8
MS.gene045362.t1	MTR_7g405740	47.541	61	31	1	25	85	67	126	2.02e-13	62.0
MS.gene045362.t1	MTR_1g061570	45.588	68	36	1	24	91	18	84	3.59e-13	60.5
MS.gene045362.t1	MTR_7g101740	46.875	64	33	1	24	87	39	101	3.65e-13	60.5
MS.gene045362.t1	MTR_3g097120	40.741	81	39	2	18	90	2	81	6.06e-13	59.7
MS.gene045362.t1	MTR_8g026730	44.444	63	32	2	25	85	27	88	7.55e-13	59.3
MS.gene045362.t1	MTR_1g063950	43.548	62	34	1	24	85	47	107	1.62e-12	58.9
MS.gene045362.t1	MTR_1g059770	37.838	74	39	2	14	87	44	110	1.35e-11	56.6
MS.gene045362.t1	MTR_8g101520	36.364	88	50	2	8	90	28	114	1.69e-11	57.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045362.t1	AT4G38840	73.529	68	17	1	24	90	32	99	1.61e-35	116
MS.gene045362.t1	AT5G18020	64.474	76	26	1	16	90	15	90	4.17e-33	110
MS.gene045362.t1	AT5G18050	63.158	76	27	1	16	90	15	90	3.08e-32	108
MS.gene045362.t1	AT5G18060	63.158	76	27	1	16	90	15	90	7.08e-32	107
MS.gene045362.t1	AT5G18080	68.657	67	20	1	25	90	24	90	9.31e-32	107
MS.gene045362.t1	AT2G21200	65.278	72	24	1	19	89	15	86	5.18e-31	104
MS.gene045362.t1	AT5G18030	67.164	67	21	1	25	90	22	88	5.48e-31	104
MS.gene045362.t1	AT4G38825	62.500	72	26	1	20	90	18	89	2.12e-30	103
MS.gene045362.t1	AT2G21210	57.692	78	31	1	15	90	18	95	2.71e-30	103
MS.gene045362.t1	AT5G18010	60.526	76	29	1	16	90	15	90	9.80e-30	101
MS.gene045362.t1	AT4G34770	65.333	75	24	1	19	91	29	103	1.66e-29	101
MS.gene045362.t1	AT2G21210	57.692	78	31	1	15	90	85	162	1.81e-29	103
MS.gene045362.t1	AT3G03840	61.644	73	26	1	21	91	23	95	5.84e-29	100
MS.gene045362.t1	AT3G03820	54.545	88	37	1	7	91	9	96	1.77e-28	99.0
MS.gene045362.t1	AT3G03850	64.706	68	22	1	26	91	26	93	6.00e-28	97.4
MS.gene045362.t1	AT4G34800	51.087	92	38	2	1	89	1	88	7.35e-28	97.1
MS.gene045362.t1	AT4G38850	56.627	83	24	2	9	88	14	87	8.59e-28	97.1
MS.gene045362.t1	AT4G34810	61.765	68	22	1	24	87	47	114	2.26e-27	96.7
MS.gene045362.t1	AT3G03830	50.549	91	37	2	8	90	2	92	2.81e-26	93.2
MS.gene045362.t1	AT4G13790	51.220	82	33	2	9	88	14	90	3.60e-25	90.5
MS.gene045362.t1	AT4G34780	55.844	77	31	1	17	90	20	96	5.30e-25	90.5
MS.gene045362.t1	AT4G34790	60.000	65	24	1	25	87	39	103	1.39e-23	86.7
MS.gene045362.t1	AT4G38860	58.462	65	27	0	23	87	38	102	1.44e-23	86.7
MS.gene045362.t1	AT1G75580	54.054	74	33	1	14	87	33	105	6.99e-23	85.1
MS.gene045362.t1	AT4G34760	56.923	65	27	1	23	87	41	104	1.37e-21	81.6
MS.gene045362.t1	AT2G21220	53.846	65	29	1	23	87	38	101	5.33e-21	80.1
MS.gene045362.t1	AT4G36110	53.030	66	30	1	24	89	39	103	3.76e-20	77.8
MS.gene045362.t1	AT3G43120	53.226	62	28	1	24	85	78	138	9.94e-20	78.6
MS.gene045362.t1	AT2G16580	53.846	65	29	1	23	87	42	105	1.04e-19	77.0
MS.gene045362.t1	AT2G18010	51.515	66	31	1	24	89	47	111	3.75e-19	75.5
MS.gene045362.t1	AT3G20220	53.030	66	29	2	25	89	47	111	4.66e-19	75.5
MS.gene045362.t1	AT5G20810	54.839	62	27	1	24	85	78	138	7.42e-19	76.3
MS.gene045362.t1	AT1G19830	58.333	60	24	1	23	82	46	104	1.16e-18	74.7
MS.gene045362.t1	AT5G20810	54.839	62	27	1	24	85	78	138	1.53e-18	75.9
MS.gene045362.t1	AT5G10990	47.222	72	37	1	11	82	27	97	2.35e-16	69.3
MS.gene045362.t1	AT1G75590	47.619	84	38	3	4	82	16	98	3.81e-16	68.9
MS.gene045362.t1	AT5G66260	42.391	92	49	2	2	90	8	98	6.54e-16	67.0
MS.gene045362.t1	AT4G34750	39.744	78	46	1	10	87	22	98	8.28e-16	68.2
MS.gene045362.t1	AT4G34750	39.744	78	46	1	10	87	22	98	8.28e-16	68.2
MS.gene045362.t1	AT1G19840	45.783	83	40	2	4	82	16	97	2.64e-15	67.0
MS.gene045362.t1	AT2G24400	53.125	64	29	1	22	85	61	123	6.78e-15	66.2
MS.gene045362.t1	AT4G31320	52.459	61	28	1	25	85	80	139	6.78e-15	66.6
MS.gene045362.t1	AT2G46690	39.744	78	43	2	17	91	16	92	8.18e-15	64.7
MS.gene045362.t1	AT3G51200	49.180	61	29	2	24	83	38	97	6.45e-14	62.0
MS.gene045362.t1	AT3G61900	38.095	84	48	2	10	90	15	97	6.63e-14	62.8
MS.gene045362.t1	AT2G37030	39.744	78	44	2	11	86	33	109	1.44e-13	61.6
MS.gene045362.t1	AT3G12830	37.333	75	46	1	11	85	36	109	2.72e-12	58.5
MS.gene045362.t1	AT4G00880	48.438	64	30	2	24	85	27	89	3.81e-12	58.2
MS.gene045362.t1	AT4G09530	42.466	73	33	3	13	82	22	88	8.78e-12	56.6
MS.gene045362.t1	AT5G53590	40.580	69	35	2	24	87	45	112	1.26e-11	57.0
MS.gene045362.t1	AT1G56150	44.262	61	33	1	25	85	38	97	1.96e-11	55.8
MS.gene045362.t1	AT3G03847	41.176	85	46	4	3	85	48	130	1.98e-11	56.2
MS.gene045362.t1	AT1G16510	37.500	80	47	2	14	91	43	121	4.77e-11	55.8

Find 26 sgRNAs with CRISPR-Local

Find 27 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATTCAATACTTTGGATGTT+TGG	0.288166	3.4:+78905685	None:intergenic
CATATTACTTCTCGCTTCAA+TGG	0.344439	3.4:-78905486	MS.gene045362:CDS
CTTTGGCACATTCAATACTT+TGG	0.381460	3.4:+78905677	None:intergenic
GTCTAATAGCTGCAGGTAAA+CGG	0.411664	3.4:+78905727	None:intergenic
GGATGTTTGGCTACTGCTAA+AGG	0.455482	3.4:+78905698	None:intergenic
AGTCAAGCTGAGGAAGAATT+CGG	0.473808	3.4:-78905564	MS.gene045362:CDS
ATATTACTTCTCGCTTCAAT+GGG	0.480545	3.4:-78905485	MS.gene045362:CDS
GTTTACCTGCAGCTATTAGA+CGG	0.499927	3.4:-78905725	MS.gene045362:CDS
GGCTATCTTGCAGTGTACAT+TGG	0.506599	3.4:-78905654	MS.gene045362:CDS
TTTACCTGCAGCTATTAGAC+GGG	0.518841	3.4:-78905724	MS.gene045362:CDS
GGAATTGTGAGGCCGCCCAT+TGG	0.522416	3.4:+78905531	None:intergenic
TTCGGATATGACCATCCAAT+GGG	0.541939	3.4:-78905546	MS.gene045362:CDS
TTGTGAGGCCGCCCATTGGA+TGG	0.552821	3.4:+78905535	None:intergenic
TACACTGCAAGATAGCCCTT+TGG	0.553564	3.4:+78905660	None:intergenic
CAAAGTATTGAATGTGCCAA+AGG	0.558522	3.4:-78905676	MS.gene045362:CDS
AAAGTATTGAATGTGCCAAA+GGG	0.560331	3.4:-78905675	MS.gene045362:CDS
AAGAAAACGTCTTCTGTGCA+AGG	0.577878	3.4:+78905510	None:intergenic
ATTCGGATATGACCATCCAA+TGG	0.589403	3.4:-78905547	MS.gene045362:CDS
GAAGCCCGTCTAATAGCTGC+AGG	0.598914	3.4:+78905720	None:intergenic
AAATTTGTTGAGTCAAGCTG+AGG	0.621487	3.4:-78905574	MS.gene045362:CDS
GCTTGGTTCAAGTATGACGT+GGG	0.632091	3.4:+78905606	None:intergenic
AGCTTGGTTCAAGTATGACG+TGG	0.646004	3.4:+78905605	None:intergenic
GGATATGACCATCCAATGGG+CGG	0.678665	3.4:-78905543	MS.gene045362:CDS
CTTGGTTCAAGTATGACGTG+GGG	0.704961	3.4:+78905607	None:intergenic
ACATTGGAGAGCAAATGAAG+CGG	0.725765	3.4:-78905638	MS.gene045362:CDS
CTTCTGTGCAAGGAATTGTG+AGG	0.726703	3.4:+78905520	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ACAAATTTTGAAATGAAGCT+TGG	+	chr3.4:78905628-78905647	None:intergenic	25.0%
	ATATTACTTCTCGCTTCAAT+GGG	-	chr3.4:78905729-78905748	MS.gene045362:CDS	30.0%
	CATTCAATACTTTGGATGTT+TGG	+	chr3.4:78905532-78905551	None:intergenic	30.0%
!!	AAAGTATTGAATGTGCCAAA+GGG	-	chr3.4:78905539-78905558	MS.gene045362:CDS	30.0%
	CATATTACTTCTCGCTTCAA+TGG	-	chr3.4:78905728-78905747	MS.gene045362:CDS	35.0%
	CTTTGGCACATTCAATACTT+TGG	+	chr3.4:78905540-78905559	None:intergenic	35.0%
!!	AAATTTGTTGAGTCAAGCTG+AGG	-	chr3.4:78905640-78905659	MS.gene045362:CDS	35.0%
!!	CAAAGTATTGAATGTGCCAA+AGG	-	chr3.4:78905538-78905557	MS.gene045362:CDS	35.0%
	AAGAAAACGTCTTCTGTGCA+AGG	+	chr3.4:78905707-78905726	None:intergenic	40.0%
	ACATTGGAGAGCAAATGAAG+CGG	-	chr3.4:78905576-78905595	MS.gene045362:CDS	40.0%
	AGTCAAGCTGAGGAAGAATT+CGG	-	chr3.4:78905650-78905669	MS.gene045362:CDS	40.0%
	ATTCGGATATGACCATCCAA+TGG	-	chr3.4:78905667-78905686	MS.gene045362:CDS	40.0%
	GTCTAATAGCTGCAGGTAAA+CGG	+	chr3.4:78905490-78905509	None:intergenic	40.0%
	GTTTACCTGCAGCTATTAGA+CGG	-	chr3.4:78905489-78905508	MS.gene045362:CDS	40.0%
	TTCGGATATGACCATCCAAT+GGG	-	chr3.4:78905668-78905687	MS.gene045362:CDS	40.0%
	TTTACCTGCAGCTATTAGAC+GGG	-	chr3.4:78905490-78905509	MS.gene045362:CDS	40.0%
	AGCTTGGTTCAAGTATGACG+TGG	+	chr3.4:78905612-78905631	None:intergenic	45.0%
	CTTCTGTGCAAGGAATTGTG+AGG	+	chr3.4:78905697-78905716	None:intergenic	45.0%
	CTTGGTTCAAGTATGACGTG+GGG	+	chr3.4:78905610-78905629	None:intergenic	45.0%
	GCTTGGTTCAAGTATGACGT+GGG	+	chr3.4:78905611-78905630	None:intergenic	45.0%
	GGATGTTTGGCTACTGCTAA+AGG	+	chr3.4:78905519-78905538	None:intergenic	45.0%
	GGCTATCTTGCAGTGTACAT+TGG	-	chr3.4:78905560-78905579	MS.gene045362:CDS	45.0%
	TACACTGCAAGATAGCCCTT+TGG	+	chr3.4:78905557-78905576	None:intergenic	45.0%
	GGATATGACCATCCAATGGG+CGG	-	chr3.4:78905671-78905690	MS.gene045362:CDS	50.0%
	GAAGCCCGTCTAATAGCTGC+AGG	+	chr3.4:78905497-78905516	None:intergenic	55.0%
	GGAATTGTGAGGCCGCCCAT+TGG	+	chr3.4:78905686-78905705	None:intergenic	60.0%
	TTGTGAGGCCGCCCATTGGA+TGG	+	chr3.4:78905682-78905701	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.4	gene	78905479	78905757	78905479	ID=MS.gene045362
chr3.4	mRNA	78905479	78905757	78905479	ID=MS.gene045362.t1;Parent=MS.gene045362
chr3.4	exon	78905479	78905757	78905479	ID=MS.gene045362.t1.exon1;Parent=MS.gene045362.t1
chr3.4	CDS	78905479	78905757	78905479	ID=cds.MS.gene045362.t1;Parent=MS.gene045362.t1

Gene Sequence	>MS.gene045362 ATGGGTTTCCGTTTACCTGCAGCTATTAGACGGGCTTCCTTTAGCAGTAGCCAAACATCCAAAGTATTGAATGTGCCAAAGGGCTATCTTGCAGTGTACATTGGAGAGCAAATGAAGCGGTTTGTTATCCCCACGTCATACTTGAACCAAGCTTCATTTCAAAATTTGTTGAGTCAAGCTGAGGAAGAATTCGGATATGACCATCCAATGGGCGGCCTCACAATTCCTTGCACAGAAGACGTTTTCTTGCATATTACTTCTCGCTTCAATGGGCTATAA
Protein sequence	>MS.gene045362.t1 MGFRLPAAIRRASFSSSQTSKVLNVPKGYLAVYIGEQMKRFVIPTSYLNQASFQNLLSQAEEEFGYDHPMGGLTIPCTEDVFLHITSRFNGL