AlfalfaGEDB | MS.gene75678

M. sativa cultivar XinJiangDaYe / MS.gene75678

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75678.t1	XP_003601668.1	94.6	92	5	0	1	92	1	92	1.00E-40	175.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75678.t1	P33080	71.7	92	26	0	1	92	1	92	4.4e-32	138.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75678.t1	G7JAQ2	94.6	92	5	0	1	92	1	92	7.5e-41	175.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049915	MS.gene75678	0.818039	2.41E-52	-1.69E-46
MS.gene053074	MS.gene75678	0.800253	1.57E-48	-1.69E-46
MS.gene054184	MS.gene75678	0.806332	8.66E-50	-1.69E-46
MS.gene054185	MS.gene75678	0.805329	1.41E-49	-1.69E-46
MS.gene055133	MS.gene75678	0.806419	8.30E-50	-1.69E-46
MS.gene057750	MS.gene75678	0.821425	4.06E-53	-1.69E-46
MS.gene057754	MS.gene75678	0.844589	6.88E-59	-1.69E-46
MS.gene059124	MS.gene75678	0.807595	4.68E-50	-1.69E-46
MS.gene059421	MS.gene75678	0.807744	4.35E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene50660	MS.gene75678	PPI
MS.gene057780	MS.gene75678	PPI
MS.gene057788	MS.gene75678	PPI
MS.gene50773	MS.gene75678	PPI
MS.gene057811	MS.gene75678	PPI
MS.gene062954	MS.gene75678	PPI
MS.gene50657	MS.gene75678	PPI
MS.gene75678	MS.gene003595	PPI
MS.gene50651	MS.gene75678	PPI
MS.gene50685	MS.gene75678	PPI
MS.gene062962	MS.gene75678	PPI
MS.gene75678	MS.gene50656	PPI
MS.gene75678	MS.gene50686	PPI
MS.gene50683	MS.gene75678	PPI
MS.gene50664	MS.gene75678	PPI
MS.gene75678	MS.gene50670	PPI
MS.gene77525	MS.gene75678	PPI
MS.gene003576	MS.gene75678	PPI
MS.gene50666	MS.gene75678	PPI
MS.gene003623	MS.gene75678	PPI
MS.gene062969	MS.gene75678	PPI
MS.gene057782	MS.gene75678	PPI
MS.gene75678	MS.gene003622	PPI
MS.gene23369	MS.gene75678	PPI
MS.gene003626	MS.gene75678	PPI
MS.gene003598	MS.gene75678	PPI
MS.gene057791	MS.gene75678	PPI
MS.gene062967	MS.gene75678	PPI
MS.gene057805	MS.gene75678	PPI
MS.gene062942	MS.gene75678	PPI
MS.gene062964	MS.gene75678	PPI
MS.gene003605	MS.gene75678	PPI
MS.gene75678	MS.gene057794	PPI
MS.gene003630	MS.gene75678	PPI
MS.gene50690	MS.gene75678	PPI
MS.gene057798	MS.gene75678	PPI
MS.gene057804	MS.gene75678	PPI
MS.gene062971	MS.gene75678	PPI
MS.gene23373	MS.gene75678	PPI
MS.gene062986	MS.gene75678	PPI
MS.gene062989	MS.gene75678	PPI
MS.gene062987	MS.gene75678	PPI
MS.gene062980	MS.gene75678	PPI
MS.gene50771	MS.gene75678	PPI
MS.gene062958	MS.gene75678	PPI
MS.gene062975	MS.gene75678	PPI
MS.gene70685	MS.gene75678	PPI
MS.gene50689	MS.gene75678	PPI
MS.gene75678	MS.gene50682	PPI
MS.gene50770	MS.gene75678	PPI
MS.gene50674	MS.gene75678	PPI
MS.gene057817	MS.gene75678	PPI
MS.gene003606	MS.gene75678	PPI
MS.gene062940	MS.gene75678	PPI
MS.gene057806	MS.gene75678	PPI
MS.gene50658	MS.gene75678	PPI
MS.gene057809	MS.gene75678	PPI
MS.gene50673	MS.gene75678	PPI
MS.gene062970	MS.gene75678	PPI
MS.gene057779	MS.gene75678	PPI
MS.gene003629	MS.gene75678	PPI
MS.gene50668	MS.gene75678	PPI
MS.gene003597	MS.gene75678	PPI
MS.gene022358	MS.gene75678	PPI
MS.gene003593	MS.gene75678	PPI
MS.gene003579	MS.gene75678	PPI
MS.gene062972	MS.gene75678	PPI
MS.gene057785	MS.gene75678	PPI
MS.gene003610	MS.gene75678	PPI
MS.gene003580	MS.gene75678	PPI
MS.gene003582	MS.gene75678	PPI
MS.gene003584	MS.gene75678	PPI
MS.gene057800	MS.gene75678	PPI
MS.gene057777	MS.gene75678	PPI
MS.gene23367	MS.gene75678	PPI
MS.gene003612	MS.gene75678	PPI
MS.gene50772	MS.gene75678	PPI
MS.gene70683	MS.gene75678	PPI
MS.gene062966	MS.gene75678	PPI
MS.gene003613	MS.gene75678	PPI
MS.gene057802	MS.gene75678	PPI
MS.gene75678	MS.gene28863	PPI
MS.gene057784	MS.gene75678	PPI
MS.gene057783	MS.gene75678	PPI
MS.gene062978	MS.gene75678	PPI
MS.gene50688	MS.gene75678	PPI
MS.gene50669	MS.gene75678	PPI
MS.gene50662	MS.gene75678	PPI
MS.gene003628	MS.gene75678	PPI
MS.gene003599	MS.gene75678	PPI
MS.gene057807	MS.gene75678	PPI
MS.gene75678	MS.gene062985	PPI
MS.gene003607	MS.gene75678	PPI
MS.gene75678	MS.gene062953	PPI
MS.gene003585	MS.gene75678	PPI
MS.gene23368	MS.gene75678	PPI
MS.gene003581	MS.gene75678	PPI
MS.gene50655	MS.gene75678	PPI
MS.gene062941	MS.gene75678	PPI
MS.gene057796	MS.gene75678	PPI
MS.gene50653	MS.gene75678	PPI
MS.gene057816	MS.gene75678	PPI
MS.gene003603	MS.gene75678	PPI
MS.gene062946	MS.gene75678	PPI
MS.gene75678	MS.gene70684	PPI
MS.gene062983	MS.gene75678	PPI
MS.gene062959	MS.gene75678	PPI
MS.gene062944	MS.gene75678	PPI
MS.gene057799	MS.gene75678	PPI
MS.gene062965	MS.gene75678	PPI
MS.gene062945	MS.gene75678	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75678.t1	MTR_3g084160	94.565	92	5	0	1	92	1	92	4.83e-53	160
MS.gene75678.t1	MTR_3g084190	91.304	92	8	0	1	92	1	92	1.23e-51	157
MS.gene75678.t1	MTR_3g084230	90.217	92	9	0	1	92	1	92	2.66e-51	156
MS.gene75678.t1	MTR_8g461420	89.130	92	10	0	1	92	1	92	1.22e-50	154
MS.gene75678.t1	MTR_3g084250	79.348	92	19	0	1	92	1	92	2.91e-50	153
MS.gene75678.t1	MTR_3g084210	86.957	92	12	0	1	92	1	92	4.13e-50	153
MS.gene75678.t1	MTR_3g110045	84.444	90	14	0	3	92	62	151	2.38e-45	143
MS.gene75678.t1	MTR_4g072500	69.565	92	28	0	1	92	1	92	1.05e-43	137
MS.gene75678.t1	MTR_3g084150	68.478	92	29	0	1	92	1	92	1.18e-43	137
MS.gene75678.t1	MTR_3g084180	67.391	92	30	0	1	92	1	92	6.70e-43	135
MS.gene75678.t1	MTR_8g461410	67.391	92	30	0	1	92	1	92	1.15e-42	134
MS.gene75678.t1	MTR_4g072530	68.889	90	28	0	1	90	1	90	2.66e-42	133
MS.gene75678.t1	MTR_4g072640	68.132	91	29	0	1	91	1	91	1.11e-41	132
MS.gene75678.t1	MTR_4g072870	68.132	91	28	1	1	90	1	91	1.18e-41	132
MS.gene75678.t1	MTR_4g072310	66.667	93	30	1	1	92	1	93	1.51e-40	129
MS.gene75678.t1	MTR_4g072570	66.304	92	31	0	1	92	1	92	2.22e-40	128
MS.gene75678.t1	MTR_4g072240	68.132	91	28	1	1	90	1	91	2.81e-40	128
MS.gene75678.t1	MTR_3g110042	68.966	87	27	0	1	87	1	87	4.29e-40	128
MS.gene75678.t1	MTR_4g072480	65.217	92	32	0	1	92	1	92	4.68e-40	127
MS.gene75678.t1	MTR_4g072880	63.441	93	33	1	1	92	1	93	1.67e-39	126
MS.gene75678.t1	MTR_4g072620	63.043	92	34	0	1	92	1	92	2.01e-39	126
MS.gene75678.t1	MTR_4g050700	65.591	93	31	1	1	92	1	93	2.12e-39	126
MS.gene75678.t1	MTR_2g012410	65.591	93	31	1	1	92	1	93	2.12e-39	126
MS.gene75678.t1	MTR_4g072270	64.516	93	32	1	1	92	1	93	3.51e-39	125
MS.gene75678.t1	MTR_4g072680	65.217	92	32	0	1	92	1	92	3.72e-39	125
MS.gene75678.t1	MTR_3g117630	67.442	86	28	0	7	92	7	92	4.06e-39	125
MS.gene75678.t1	MTR_3g084170	67.742	93	28	2	1	92	1	92	4.48e-39	125
MS.gene75678.t1	MTR_4g072260	65.591	93	31	1	1	92	1	93	5.56e-39	125
MS.gene75678.t1	MTR_4g072730	63.333	90	33	0	1	90	1	90	1.11e-38	124
MS.gene75678.t1	MTR_4g072300	65.934	91	30	1	1	90	1	91	1.35e-38	124
MS.gene75678.t1	MTR_4g072830	65.217	92	30	1	1	92	1	90	1.49e-38	124
MS.gene75678.t1	MTR_4g072860	64.516	93	32	1	1	92	1	93	2.07e-38	123
MS.gene75678.t1	MTR_4g072370	67.033	91	26	2	1	90	1	88	2.39e-38	123
MS.gene75678.t1	MTR_4g072890	65.934	91	30	1	1	90	1	91	2.90e-38	123
MS.gene75678.t1	MTR_4g072490	68.132	91	22	2	1	90	1	85	3.03e-38	123
MS.gene75678.t1	MTR_3g110038	67.742	93	28	2	1	92	1	92	4.06e-38	122
MS.gene75678.t1	MTR_4g072600	68.132	91	24	1	1	91	1	86	4.28e-38	122
MS.gene75678.t1	MTR_3g084240	66.667	93	29	2	1	92	1	92	4.29e-38	122
MS.gene75678.t1	MTR_4g072230	65.591	93	29	2	1	92	1	91	5.19e-38	122
MS.gene75678.t1	MTR_4g072330	63.333	90	31	1	1	90	1	88	5.75e-38	122
MS.gene75678.t1	MTR_4g072220	64.516	93	32	1	1	92	1	93	6.07e-38	122
MS.gene75678.t1	MTR_4g072460	63.043	92	34	0	1	92	1	92	6.58e-38	122
MS.gene75678.t1	MTR_4g072250	65.591	93	30	2	1	92	1	92	2.99e-37	120
MS.gene75678.t1	MTR_3g110032	62.366	93	34	1	1	92	1	93	3.67e-37	120
MS.gene75678.t1	MTR_4g072580	66.304	92	24	2	1	91	1	86	6.35e-37	119
MS.gene75678.t1	MTR_4g072740	65.934	91	24	2	1	90	1	85	6.47e-37	119
MS.gene75678.t1	MTR_3g084220	64.516	93	31	2	1	92	1	92	1.50e-36	119
MS.gene75678.t1	MTR_4g072610	63.736	91	27	1	1	91	1	85	3.61e-36	117
MS.gene75678.t1	MTR_4g072820	69.231	91	21	2	1	90	1	85	4.20e-36	117
MS.gene75678.t1	MTR_4g072630	64.444	90	28	1	1	90	1	86	5.78e-36	117
MS.gene75678.t1	MTR_4g072470	67.033	91	23	2	1	90	1	85	1.44e-35	116
MS.gene75678.t1	MTR_4g072540	66.667	90	26	1	1	90	1	86	1.69e-35	116
MS.gene75678.t1	MTR_4g072650	63.736	91	27	1	1	91	1	85	3.45e-35	115
MS.gene75678.t1	MTR_4g072590	68.889	90	23	1	1	90	1	85	7.63e-35	114
MS.gene75678.t1	MTR_4g072465	63.333	90	29	1	1	90	1	86	1.87e-34	113
MS.gene75678.t1	MTR_3g084260	60.215	93	36	1	1	92	1	93	1.90e-34	113
MS.gene75678.t1	MTR_4g072850	62.766	94	33	1	1	92	1	94	3.38e-34	113
MS.gene75678.t1	MTR_4g072720	65.556	90	27	1	1	90	1	86	1.95e-33	110
MS.gene75678.t1	MTR_4g072380	67.033	91	24	2	1	90	1	86	3.14e-33	110
MS.gene75678.t1	MTR_4g072670	63.333	90	29	1	1	90	1	86	4.69e-33	110
MS.gene75678.t1	MTR_4g072660	57.609	92	34	1	1	92	1	87	5.57e-33	109
MS.gene75678.t1	MTR_5g008360	62.195	82	31	0	11	92	2	83	2.28e-32	108
MS.gene75678.t1	MTR_4g072510	61.111	90	31	1	1	90	1	86	4.95e-32	107
MS.gene75678.t1	MTR_4g072450	65.556	90	26	1	1	90	1	85	2.46e-31	105
MS.gene75678.t1	MTR_4g072980	56.522	92	37	2	1	89	1	92	8.31e-31	104
MS.gene75678.t1	MTR_4g072940	60.870	92	34	1	3	92	33	124	1.65e-30	104
MS.gene75678.t1	MTR_4g072690	63.333	90	28	1	1	90	1	85	7.12e-30	102
MS.gene75678.t1	MTR_4g072910	64.179	67	24	0	24	90	34	100	4.55e-29	100
MS.gene75678.t1	MTR_5g008370	70.588	68	20	0	23	90	23	90	5.20e-29	101
MS.gene75678.t1	MTR_4g072750	62.500	80	28	1	1	78	1	80	2.89e-28	97.8
MS.gene75678.t1	MTR_5g008350	61.250	80	24	2	1	79	1	74	3.43e-28	97.4
MS.gene75678.t1	MTR_4g072560	50.515	97	40	3	1	89	1	97	3.44e-28	98.2
MS.gene75678.t1	MTR_4g072770	66.667	66	22	0	25	90	15	80	1.09e-27	96.3
MS.gene75678.t1	MTR_3g084200	65.278	72	23	2	1	71	1	71	1.15e-27	97.1
MS.gene75678.t1	MTR_3g110035	69.697	66	20	0	27	92	73	138	3.10e-27	97.1
MS.gene75678.t1	MTR_4g072550	58.904	73	30	0	20	92	31	103	4.23e-27	95.5
MS.gene75678.t1	MTR_4g072280	63.235	68	24	1	1	67	1	68	1.53e-26	93.2
MS.gene75678.t1	MTR_3g117640	60.294	68	26	1	24	90	33	100	5.76e-25	90.1
MS.gene75678.t1	MTR_4g072290	51.613	93	30	2	1	92	1	79	3.02e-24	87.4
MS.gene75678.t1	MTR_3g117610	57.971	69	28	1	23	91	43	110	3.44e-23	85.9
MS.gene75678.t1	MTR_3g113310	55.882	68	29	1	22	89	39	105	1.33e-22	84.3
MS.gene75678.t1	MTR_4g072930	49.383	81	35	2	16	90	30	110	9.54e-22	82.0
MS.gene75678.t1	MTR_4g072190	56.716	67	28	1	23	89	34	99	3.72e-21	80.5
MS.gene75678.t1	MTR_6g077850	48.529	68	35	0	24	91	33	100	3.09e-20	78.2
MS.gene75678.t1	MTR_5g021820	54.545	66	29	1	24	89	39	103	1.56e-19	76.3
MS.gene75678.t1	MTR_8g076040	54.545	66	29	1	24	89	40	104	8.78e-19	74.3
MS.gene75678.t1	MTR_4g072840	51.648	91	12	3	1	90	1	60	3.15e-18	71.6
MS.gene75678.t1	MTR_8g461400	48.387	93	20	3	1	92	1	66	4.59e-18	71.6
MS.gene75678.t1	MTR_4g025830	52.459	61	25	2	25	82	79	138	1.79e-17	72.8
MS.gene75678.t1	MTR_4g072160	48.529	68	34	1	24	91	36	102	1.60e-16	69.7
MS.gene75678.t1	MTR_1g024085	40.230	87	49	2	7	91	17	102	4.19e-16	68.6
MS.gene75678.t1	MTR_8g461210	45.588	68	36	1	24	91	34	100	2.12e-15	66.2
MS.gene75678.t1	MTR_1g063950	44.000	75	41	1	9	83	32	105	4.09e-15	65.5
MS.gene75678.t1	MTR_0388s0020	48.438	64	29	2	18	78	68	130	5.96e-15	65.9
MS.gene75678.t1	MTR_7g118010	43.478	69	36	2	25	91	23	90	6.03e-15	64.7
MS.gene75678.t1	MTR_4g005310	46.914	81	35	3	9	82	41	120	8.03e-15	65.5
MS.gene75678.t1	MTR_7g101740	48.438	64	32	1	24	87	39	101	1.14e-14	64.3
MS.gene75678.t1	MTR_4g124750	52.542	59	27	1	24	82	68	125	1.17e-14	65.1
MS.gene75678.t1	MTR_2g043960	43.333	90	41	3	2	82	44	132	1.23e-14	65.5
MS.gene75678.t1	MTR_1g094750	43.836	73	38	2	14	84	37	108	1.35e-14	63.9
MS.gene75678.t1	MTR_1g061570	50.847	59	28	1	24	82	18	75	2.55e-14	63.5
MS.gene75678.t1	MTR_1g009150	47.436	78	36	2	9	82	51	127	3.14e-14	64.7
MS.gene75678.t1	MTR_3g092220	37.037	81	48	2	12	90	20	99	4.14e-14	62.8
MS.gene75678.t1	MTR_4g005320	46.154	65	34	1	25	89	70	133	3.88e-13	61.2
MS.gene75678.t1	MTR_8g026730	40.580	69	38	2	25	91	27	94	6.49e-13	59.7
MS.gene75678.t1	MTR_3g109160	43.243	74	41	1	9	82	53	125	3.50e-12	58.9
MS.gene75678.t1	MTR_7g405740	36.905	84	46	3	6	84	44	125	6.97e-12	58.2
MS.gene75678.t1	MTR_2g066830	37.037	81	44	2	2	82	41	114	1.17e-11	57.0
MS.gene75678.t1	MTR_3g098970	34.483	87	51	2	11	92	34	119	1.85e-11	56.6
MS.gene75678.t1	MTR_3g097120	42.466	73	33	2	20	84	4	75	4.30e-11	54.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75678.t1	AT5G18020	58.442	77	31	1	16	91	15	91	5.37e-28	97.4
MS.gene75678.t1	AT2G21200	61.111	72	27	1	19	89	15	86	2.81e-27	95.5
MS.gene75678.t1	AT5G18080	58.667	75	30	1	16	89	15	89	4.87e-27	95.1
MS.gene75678.t1	AT4G34800	56.962	79	29	2	10	83	4	82	6.78e-27	94.7
MS.gene75678.t1	AT5G18050	57.333	75	31	1	16	89	15	89	7.55e-27	94.4
MS.gene75678.t1	AT5G18010	56.579	76	32	1	16	90	15	90	8.80e-27	94.4
MS.gene75678.t1	AT4G34770	58.667	75	29	1	18	90	28	102	1.12e-26	94.4
MS.gene75678.t1	AT5G18060	57.895	76	31	1	16	90	15	90	1.13e-26	94.0
MS.gene75678.t1	AT4G38840	49.495	99	41	2	1	90	1	99	2.36e-26	93.6
MS.gene75678.t1	AT2G21210	53.750	80	35	1	13	90	16	95	2.67e-26	93.2
MS.gene75678.t1	AT4G38825	57.333	75	31	1	17	90	15	89	2.89e-26	92.8
MS.gene75678.t1	AT3G03820	58.904	73	27	1	18	87	20	92	3.07e-26	93.2
MS.gene75678.t1	AT4G38850	62.121	66	22	1	25	87	21	86	3.92e-26	92.8
MS.gene75678.t1	AT3G03840	62.319	69	24	1	21	87	23	91	6.43e-26	92.4
MS.gene75678.t1	AT2G21210	56.757	74	30	1	19	90	89	162	1.13e-25	93.6
MS.gene75678.t1	AT5G18030	58.108	74	30	1	18	90	15	88	1.30e-25	91.3
MS.gene75678.t1	AT4G34810	61.538	65	21	1	24	84	47	111	2.31e-25	91.7
MS.gene75678.t1	AT3G03850	62.687	67	23	1	26	90	26	92	3.52e-24	87.8
MS.gene75678.t1	AT4G34790	62.295	61	21	1	25	83	39	99	1.02e-22	84.7
MS.gene75678.t1	AT4G38860	57.353	68	29	0	23	90	38	105	1.78e-22	84.0
MS.gene75678.t1	AT4G34780	54.167	72	30	1	23	91	26	97	2.37e-22	83.6
MS.gene75678.t1	AT2G21220	57.353	68	28	1	23	90	38	104	3.97e-22	82.8
MS.gene75678.t1	AT4G13790	47.887	71	35	1	19	87	19	89	6.91e-21	79.3
MS.gene75678.t1	AT1G75580	58.209	67	27	1	23	89	42	107	1.50e-20	79.0
MS.gene75678.t1	AT3G03830	53.425	73	31	1	18	87	17	89	1.77e-20	78.6
MS.gene75678.t1	AT4G34760	55.224	67	29	1	23	89	41	106	4.06e-20	77.8
MS.gene75678.t1	AT5G66260	56.061	66	28	1	25	90	34	98	2.73e-18	73.2
MS.gene75678.t1	AT1G19830	58.333	60	24	1	23	82	46	104	6.31e-18	72.8
MS.gene75678.t1	AT5G20810	54.545	66	29	1	17	82	71	135	8.82e-18	73.6
MS.gene75678.t1	AT5G20810	54.545	66	29	1	17	82	71	135	9.81e-18	73.9
MS.gene75678.t1	AT2G16580	52.239	67	31	1	23	89	42	107	2.75e-17	70.9
MS.gene75678.t1	AT3G43120	50.725	69	33	1	14	82	68	135	3.11e-17	72.0
MS.gene75678.t1	AT4G36110	50.000	66	32	1	24	89	39	103	1.33e-16	68.9
MS.gene75678.t1	AT2G18010	50.000	66	32	1	24	89	47	111	5.12e-16	67.8
MS.gene75678.t1	AT4G34750	41.176	68	39	1	24	91	36	102	2.30e-15	67.0
MS.gene75678.t1	AT4G34750	41.176	68	39	1	24	91	36	102	2.30e-15	67.0
MS.gene75678.t1	AT1G75590	43.836	73	40	1	13	85	30	101	3.76e-15	66.6
MS.gene75678.t1	AT2G45210	47.619	63	29	2	18	77	72	133	4.46e-15	66.6
MS.gene75678.t1	AT5G10990	42.647	68	38	1	24	91	40	106	5.80e-15	65.9
MS.gene75678.t1	AT2G37030	47.619	63	32	1	24	86	48	109	1.68e-14	63.9
MS.gene75678.t1	AT4G00880	41.026	78	43	2	16	91	19	95	2.03e-14	63.9
MS.gene75678.t1	AT3G20220	44.286	70	37	2	14	82	36	104	2.68e-14	63.5
MS.gene75678.t1	AT3G61900	41.250	80	41	3	17	91	20	98	2.89e-14	63.9
MS.gene75678.t1	AT3G51200	50.769	65	30	2	20	83	34	97	6.67e-14	62.0
MS.gene75678.t1	AT1G19840	43.038	79	41	2	7	82	20	97	1.20e-13	62.4
MS.gene75678.t1	AT2G46690	35.484	93	55	3	1	90	1	91	3.26e-13	60.8
MS.gene75678.t1	AT5G53590	41.667	72	36	2	24	90	45	115	5.66e-13	60.5
MS.gene75678.t1	AT3G60690	44.118	68	34	2	25	89	88	154	6.97e-13	60.8
MS.gene75678.t1	AT3G12830	44.118	68	36	2	11	77	35	101	2.19e-12	58.9
MS.gene75678.t1	AT1G56150	46.552	58	30	1	25	82	38	94	2.84e-12	58.2
MS.gene75678.t1	AT1G16510	41.538	65	37	1	25	89	54	117	3.89e-12	58.5
MS.gene75678.t1	AT3G53250	39.683	63	34	1	24	86	51	109	4.53e-12	57.8
MS.gene75678.t1	AT4G09530	42.857	70	34	3	16	82	22	88	7.15e-12	57.0
MS.gene75678.t1	AT4G12410	41.333	75	39	3	11	82	63	135	9.31e-12	57.8
MS.gene75678.t1	AT4G22620	43.077	65	33	2	21	82	75	138	7.59e-11	55.5

Find 18 sgRNAs with CRISPR-Local

Find 19 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAAGAACATGTCTTCTTTGC+AGG	0.267485	3.3:-70567094	None:intergenic
CTAAGCAATTCTTGAAATAA+AGG	0.274282	3.3:-70567018	None:intergenic
GGCTCATTCAAGAATGATAT+TGG	0.332163	3.3:-70566997	None:intergenic
TACACTGCAAGATTGCCTTT+TGG	0.364820	3.3:-70566943	None:intergenic
AGTGATAATCTTCTAATAAC+AGG	0.385377	3.3:-70566883	None:intergenic
AACCGAATTCCTCTTCAGAT+TGG	0.451328	3.3:-70567041	None:intergenic
AGCCAATCTGAAGAGGAATT+CGG	0.463119	3.3:+70567039	MS.gene75678:CDS
TTCGGTTATTGCCATCCAAT+GGG	0.477895	3.3:+70567057	MS.gene75678:CDS
ATTCGGTTATTGCCATCCAA+TGG	0.505676	3.3:+70567056	MS.gene75678:CDS
GGCAATCTTGCAGTGTATGT+TGG	0.512427	3.3:+70566949	MS.gene75678:CDS
AAGAACATGTCTTCTTTGCA+GGG	0.543455	3.3:-70567093	None:intergenic
TGTATGTTGGAGAGAAAATG+AGG	0.557529	3.3:+70566962	MS.gene75678:CDS
TCAATCATCTAGCAAACAAG+TGG	0.562035	3.3:+70566915	MS.gene75678:CDS
AAACAAGTGGAAGTTCCAAA+AGG	0.569150	3.3:+70566928	MS.gene75678:CDS
TTGTAAGACAACCCATTGGA+TGG	0.581997	3.3:-70567068	None:intergenic
ATTGCTTAGCCAATCTGAAG+AGG	0.582237	3.3:+70567032	MS.gene75678:CDS
GGAATTGTAAGACAACCCAT+TGG	0.634826	3.3:-70567072	None:intergenic
ATGTTGGAGAGAAAATGAGG+AGG	0.699822	3.3:+70566965	MS.gene75678:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AGTGATAATCTTCTAATAAC+AGG	-	chr3.3:70566886-70566905	None:intergenic	25.0%
!	CTAAGCAATTCTTGAAATAA+AGG	-	chr3.3:70567021-70567040	None:intergenic	25.0%
!!	AAACAACTTCTGTTTTGAAC+AGG	+	chr3.3:70567118-70567137	MS.gene75678:CDS	30.0%
	AAACAAGTGGAAGTTCCAAA+AGG	+	chr3.3:70566928-70566947	MS.gene75678:CDS	35.0%
	AAGAACATGTCTTCTTTGCA+GGG	-	chr3.3:70567096-70567115	None:intergenic	35.0%
	GGCTCATTCAAGAATGATAT+TGG	-	chr3.3:70567000-70567019	None:intergenic	35.0%
	TAAGAACATGTCTTCTTTGC+AGG	-	chr3.3:70567097-70567116	None:intergenic	35.0%
	TCAATCATCTAGCAAACAAG+TGG	+	chr3.3:70566915-70566934	MS.gene75678:CDS	35.0%
	TGTATGTTGGAGAGAAAATG+AGG	+	chr3.3:70566962-70566981	MS.gene75678:CDS	35.0%
	AACCGAATTCCTCTTCAGAT+TGG	-	chr3.3:70567044-70567063	None:intergenic	40.0%
	AGCCAATCTGAAGAGGAATT+CGG	+	chr3.3:70567039-70567058	MS.gene75678:CDS	40.0%
	ATGTTGGAGAGAAAATGAGG+AGG	+	chr3.3:70566965-70566984	MS.gene75678:CDS	40.0%
	ATTCGGTTATTGCCATCCAA+TGG	+	chr3.3:70567056-70567075	MS.gene75678:CDS	40.0%
	ATTGCTTAGCCAATCTGAAG+AGG	+	chr3.3:70567032-70567051	MS.gene75678:CDS	40.0%
	GGAATTGTAAGACAACCCAT+TGG	-	chr3.3:70567075-70567094	None:intergenic	40.0%
	TTCGGTTATTGCCATCCAAT+GGG	+	chr3.3:70567057-70567076	MS.gene75678:CDS	40.0%
	TTGTAAGACAACCCATTGGA+TGG	-	chr3.3:70567071-70567090	None:intergenic	40.0%
!	TACACTGCAAGATTGCCTTT+TGG	-	chr3.3:70566946-70566965	None:intergenic	40.0%
	GGCAATCTTGCAGTGTATGT+TGG	+	chr3.3:70566949-70566968	MS.gene75678:CDS	45.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	70566868	70567146	70566868	ID=MS.gene75678
chr3.3	mRNA	70566868	70567146	70566868	ID=MS.gene75678.t1;Parent=MS.gene75678
chr3.3	exon	70566868	70567146	70566868	ID=MS.gene75678.t1.exon1;Parent=MS.gene75678.t1
chr3.3	CDS	70566868	70567146	70566868	ID=cds.MS.gene75678.t1;Parent=MS.gene75678.t1

Gene Sequence	>MS.gene75678 ATGGGTTTTCGCTTACCTGTTATTAGAAGATTATCACTTAGTGCAAGTCAATCATCTAGCAAACAAGTGGAAGTTCCAAAAGGCAATCTTGCAGTGTATGTTGGAGAGAAAATGAGGAGGTTTATGATTCCAATATCATTCTTGAATGAGCCTTTATTTCAAGAATTGCTTAGCCAATCTGAAGAGGAATTCGGTTATTGCCATCCAATGGGTTGTCTTACAATTCCCTGCAAAGAAGACATGTTCTTACAAACAACTTCTGTTTTGAACAGGCTATAA
Protein sequence	>MS.gene75678.t1 MGFRLPVIRRLSLSASQSSSKQVEVPKGNLAVYVGEKMRRFMIPISFLNEPLFQELLSQSEEEFGYCHPMGCLTIPCKEDMFLQTTSVLNRL