AlfalfaGEDB | MS.gene003586

M. sativa cultivar XinJiangDaYe / MS.gene003586

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003586.t1	AES89350.1	91.9	86	7	0	1	86	1	86	6.50E-37	162.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003586.t1	P33081	77.4	84	16	2	1	84	1	81	5.6e-29	127.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003586.t1	G7JMA7	91.9	86	7	0	1	86	1	86	4.7e-37	162.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene003586	MS.gene057799	PPI
MS.gene062975	MS.gene003586	PPI
MS.gene003586	MS.gene003630	PPI
MS.gene50689	MS.gene003586	PPI
MS.gene003586	MS.gene057779	PPI
MS.gene50674	MS.gene003586	PPI
MS.gene003586	MS.gene062965	PPI
MS.gene003586	MS.gene50771	PPI
MS.gene003586	MS.gene022358	PPI
MS.gene057806	MS.gene003586	PPI
MS.gene057809	MS.gene003586	PPI
MS.gene003586	MS.gene23369	PPI
MS.gene50673	MS.gene003586	PPI
MS.gene003586	MS.gene062986	PPI
MS.gene062970	MS.gene003586	PPI
MS.gene003586	MS.gene50770	PPI
MS.gene003586	MS.gene057811	PPI
MS.gene003597	MS.gene003586	PPI
MS.gene003586	MS.gene062944	PPI
MS.gene003586	MS.gene50658	PPI
MS.gene003586	MS.gene50655	PPI
MS.gene003586	MS.gene28863	PPI
MS.gene003593	MS.gene003586	PPI
MS.gene003586	MS.gene003584	PPI
MS.gene003586	MS.gene057791	PPI
MS.gene062972	MS.gene003586	PPI
MS.gene003586	MS.gene057804	PPI
MS.gene003580	MS.gene003586	PPI
MS.gene003586	MS.gene50651	PPI
MS.gene003582	MS.gene003586	PPI
MS.gene003586	MS.gene50656	PPI
MS.gene057800	MS.gene003586	PPI
MS.gene003586	MS.gene50666	PPI
MS.gene003586	MS.gene062985	PPI
MS.gene003586	MS.gene057784	PPI
MS.gene50772	MS.gene003586	PPI
MS.gene003586	MS.gene062953	PPI
MS.gene062966	MS.gene003586	PPI
MS.gene003586	MS.gene003599	PPI
MS.gene003586	MS.gene23368	PPI
MS.gene057783	MS.gene003586	PPI
MS.gene003586	MS.gene062987	PPI
MS.gene062978	MS.gene003586	PPI
MS.gene003586	MS.gene057817	PPI
MS.gene003586	MS.gene70684	PPI
MS.gene003586	MS.gene062964	PPI
MS.gene003586	MS.gene062958	PPI
MS.gene003586	MS.gene057798	PPI
MS.gene003586	MS.gene003612	PPI
MS.gene003586	MS.gene062983	PPI
MS.gene003586	MS.gene057777	PPI
MS.gene003586	MS.gene062945	PPI
MS.gene50662	MS.gene003586	PPI
MS.gene50683	MS.gene003586	PPI
MS.gene003586	MS.gene062967	PPI
MS.gene003628	MS.gene003586	PPI
MS.gene057807	MS.gene003586	PPI
MS.gene003586	MS.gene003579	PPI
MS.gene003586	MS.gene062989	PPI
MS.gene003586	MS.gene003595	PPI
MS.gene003586	MS.gene003607	PPI
MS.gene003585	MS.gene003586	PPI
MS.gene003586	MS.gene50686	PPI
MS.gene003586	MS.gene057785	PPI
MS.gene003586	MS.gene70683	PPI
MS.gene003586	MS.gene50670	PPI
MS.gene057816	MS.gene003586	PPI
MS.gene003603	MS.gene003586	PPI
MS.gene062946	MS.gene003586	PPI
MS.gene003586	MS.gene50669	PPI
MS.gene003586	MS.gene70685	PPI
MS.gene003586	MS.gene003622	PPI
MS.gene003586	MS.gene062941	PPI
MS.gene003586	MS.gene50660	PPI
MS.gene003586	MS.gene003623	PPI
MS.gene003586	MS.gene50668	PPI
MS.gene062954	MS.gene003586	PPI
MS.gene003586	MS.gene003581	PPI
MS.gene50657	MS.gene003586	PPI
MS.gene003586	MS.gene057794	PPI
MS.gene003586	MS.gene50688	PPI
MS.gene003586	MS.gene003629	PPI
MS.gene062962	MS.gene003586	PPI
MS.gene003586	MS.gene062980	PPI
MS.gene003586	MS.gene23367	PPI
MS.gene77525	MS.gene003586	PPI
MS.gene003576	MS.gene003586	PPI
MS.gene003586	MS.gene062940	PPI
MS.gene003586	MS.gene003610	PPI
MS.gene062969	MS.gene003586	PPI
MS.gene003586	MS.gene062959	PPI
MS.gene057782	MS.gene003586	PPI
MS.gene003606	MS.gene003586	PPI
MS.gene003586	MS.gene057802	PPI
MS.gene003586	MS.gene50664	PPI
MS.gene003586	MS.gene50773	PPI
MS.gene003586	MS.gene057796	PPI
MS.gene003626	MS.gene003586	PPI
MS.gene003586	MS.gene50682	PPI
MS.gene003586	MS.gene50653	PPI
MS.gene003586	MS.gene003598	PPI
MS.gene003586	MS.gene50690	PPI
MS.gene057805	MS.gene003586	PPI
MS.gene062942	MS.gene003586	PPI
MS.gene003605	MS.gene003586	PPI
MS.gene003586	MS.gene057780	PPI
MS.gene003586	MS.gene057788	PPI
MS.gene062971	MS.gene003586	PPI
MS.gene23373	MS.gene003586	PPI
MS.gene003586	MS.gene50685	PPI
MS.gene003586	MS.gene003613	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003586.t1	MTR_4g072820	91.860	86	7	0	1	86	1	86	1.49e-54	164
MS.gene003586.t1	MTR_4g072610	77.381	84	18	1	1	84	1	83	3.41e-43	135
MS.gene003586.t1	MTR_3g084150	71.429	91	19	2	1	85	1	90	1.00e-42	134
MS.gene003586.t1	MTR_4g072580	78.824	85	16	2	1	84	1	84	1.45e-42	133
MS.gene003586.t1	MTR_4g072740	76.744	86	18	2	1	85	1	85	1.80e-42	133
MS.gene003586.t1	MTR_4g072370	74.157	89	18	2	1	85	1	88	3.81e-42	132
MS.gene003586.t1	MTR_4g072650	77.381	84	18	1	1	84	1	83	3.90e-42	132
MS.gene003586.t1	MTR_3g084180	70.330	91	20	2	1	85	1	90	8.71e-42	132
MS.gene003586.t1	MTR_4g072490	75.581	86	19	2	1	85	1	85	9.95e-42	131
MS.gene003586.t1	MTR_4g072380	78.313	83	17	1	1	82	1	83	3.27e-41	130
MS.gene003586.t1	MTR_8g461410	68.132	91	22	2	1	85	1	90	3.28e-41	130
MS.gene003586.t1	MTR_4g072310	69.565	92	20	2	1	85	1	91	5.86e-40	127
MS.gene003586.t1	MTR_4g072870	68.132	91	23	2	1	85	1	91	6.10e-40	127
MS.gene003586.t1	MTR_4g072470	74.419	86	20	2	1	85	1	85	6.44e-40	127
MS.gene003586.t1	MTR_3g084240	70.000	90	22	2	1	85	1	90	1.02e-39	126
MS.gene003586.t1	MTR_3g110038	68.889	90	23	2	1	85	1	90	1.11e-39	126
MS.gene003586.t1	MTR_4g072500	68.889	90	23	1	1	85	1	90	1.54e-39	126
MS.gene003586.t1	MTR_3g084170	68.889	90	23	2	1	85	1	90	3.92e-39	125
MS.gene003586.t1	MTR_3g110042	70.000	90	20	2	1	84	1	89	4.89e-39	125
MS.gene003586.t1	MTR_4g072260	68.889	90	22	2	1	84	1	90	4.98e-39	125
MS.gene003586.t1	MTR_4g072330	65.909	88	27	1	1	85	1	88	6.26e-39	124
MS.gene003586.t1	MTR_4g072240	64.835	91	26	1	1	85	1	91	6.52e-39	124
MS.gene003586.t1	MTR_4g072220	68.889	90	22	2	1	84	1	90	6.62e-39	124
MS.gene003586.t1	MTR_4g072630	72.414	87	21	2	1	85	1	86	1.08e-38	124
MS.gene003586.t1	MTR_4g072640	67.778	90	24	2	1	85	1	90	3.76e-38	122
MS.gene003586.t1	MTR_4g072530	66.667	90	25	1	1	85	1	90	3.83e-38	122
MS.gene003586.t1	MTR_4g050700	67.033	91	24	2	1	85	1	91	6.70e-38	122
MS.gene003586.t1	MTR_2g012410	67.033	91	24	2	1	85	1	91	6.70e-38	122
MS.gene003586.t1	MTR_4g072830	72.727	88	19	3	1	84	1	87	9.30e-38	121
MS.gene003586.t1	MTR_4g072670	74.713	87	19	2	1	85	1	86	9.66e-38	121
MS.gene003586.t1	MTR_4g072300	62.637	91	28	1	1	85	1	91	1.25e-37	121
MS.gene003586.t1	MTR_4g072890	65.934	91	25	2	1	85	1	91	1.38e-37	121
MS.gene003586.t1	MTR_3g084250	68.132	91	22	2	1	85	1	90	1.39e-37	121
MS.gene003586.t1	MTR_4g072465	71.264	87	22	2	1	85	1	86	1.40e-37	121
MS.gene003586.t1	MTR_4g072880	67.391	92	22	3	1	85	1	91	1.44e-37	121
MS.gene003586.t1	MTR_4g072600	72.941	85	21	2	1	84	1	84	1.66e-37	120
MS.gene003586.t1	MTR_4g072540	74.713	87	19	2	1	85	1	86	3.85e-37	120
MS.gene003586.t1	MTR_3g084220	65.556	90	26	2	1	85	1	90	5.46e-37	119
MS.gene003586.t1	MTR_4g072850	65.591	93	23	2	1	85	1	92	5.92e-37	119
MS.gene003586.t1	MTR_4g072720	73.563	87	20	2	1	85	1	86	6.03e-37	119
MS.gene003586.t1	MTR_4g072230	70.000	90	17	3	1	83	1	87	1.25e-36	119
MS.gene003586.t1	MTR_4g072480	64.835	91	25	2	1	85	1	90	1.67e-36	118
MS.gene003586.t1	MTR_3g084260	62.637	91	28	1	1	85	1	91	1.68e-36	118
MS.gene003586.t1	MTR_4g072590	71.765	85	24	0	1	85	1	85	1.87e-36	118
MS.gene003586.t1	MTR_3g117630	67.442	86	21	2	6	85	6	90	2.89e-36	118
MS.gene003586.t1	MTR_4g072250	68.478	92	20	3	1	85	1	90	4.20e-36	117
MS.gene003586.t1	MTR_4g072570	64.835	91	25	2	1	85	1	90	5.23e-36	117
MS.gene003586.t1	MTR_8g461420	70.000	90	22	1	1	85	1	90	5.46e-36	117
MS.gene003586.t1	MTR_4g072510	71.264	87	22	2	1	85	1	86	1.52e-35	115
MS.gene003586.t1	MTR_3g084190	67.778	90	24	1	1	85	1	90	2.30e-35	115
MS.gene003586.t1	MTR_3g110032	64.130	92	25	3	1	85	1	91	2.34e-35	115
MS.gene003586.t1	MTR_4g072620	61.538	91	28	2	1	85	1	90	3.56e-35	115
MS.gene003586.t1	MTR_3g084230	69.231	91	21	2	1	85	1	90	3.89e-35	115
MS.gene003586.t1	MTR_4g072660	64.634	82	29	0	1	82	1	82	5.33e-35	114
MS.gene003586.t1	MTR_4g072680	62.637	91	27	2	1	85	1	90	5.90e-35	114
MS.gene003586.t1	MTR_4g072730	61.538	91	28	2	1	85	1	90	7.43e-35	114
MS.gene003586.t1	MTR_3g084210	67.033	91	23	2	1	85	1	90	7.84e-35	114
MS.gene003586.t1	MTR_4g072690	68.235	85	27	0	1	85	1	85	1.24e-34	113
MS.gene003586.t1	MTR_4g072270	64.045	89	24	2	1	82	1	88	1.31e-34	114
MS.gene003586.t1	MTR_4g072770	64.706	85	25	1	1	85	1	80	1.36e-34	113
MS.gene003586.t1	MTR_5g008350	74.667	75	17	2	1	74	1	74	3.37e-34	112
MS.gene003586.t1	MTR_3g110045	69.663	89	20	2	3	85	62	149	7.32e-34	114
MS.gene003586.t1	MTR_4g072860	64.130	92	25	2	1	85	1	91	9.94e-34	111
MS.gene003586.t1	MTR_4g072460	60.440	91	29	2	1	85	1	90	1.62e-33	111
MS.gene003586.t1	MTR_3g084160	65.934	91	24	2	1	85	1	90	5.58e-33	109
MS.gene003586.t1	MTR_4g072940	63.736	91	24	2	3	85	33	122	1.13e-32	110
MS.gene003586.t1	MTR_4g072450	65.882	85	29	0	1	85	1	85	1.49e-32	108
MS.gene003586.t1	MTR_5g008370	78.788	66	14	0	20	85	25	90	1.50e-32	110
MS.gene003586.t1	MTR_5g008360	67.105	76	24	1	10	85	7	81	8.33e-32	106
MS.gene003586.t1	MTR_4g072980	55.172	87	38	1	1	86	8	94	9.83e-31	104
MS.gene003586.t1	MTR_4g072550	61.446	83	28	1	7	85	19	101	2.00e-30	103
MS.gene003586.t1	MTR_4g072560	59.524	84	31	2	4	86	18	99	6.43e-30	102
MS.gene003586.t1	MTR_4g072840	62.791	86	7	2	1	86	1	61	1.25e-28	97.8
MS.gene003586.t1	MTR_4g072910	61.538	78	27	1	8	85	26	100	1.76e-28	98.6
MS.gene003586.t1	MTR_3g084200	68.493	73	16	3	1	67	1	72	2.13e-28	98.6
MS.gene003586.t1	MTR_3g117640	65.672	67	22	1	20	85	34	100	4.35e-28	97.8
MS.gene003586.t1	MTR_4g072290	57.647	85	28	1	1	85	1	77	2.65e-26	92.4
MS.gene003586.t1	MTR_4g072750	65.753	73	18	1	1	66	1	73	3.06e-26	92.4
MS.gene003586.t1	MTR_3g110035	64.062	64	23	0	22	85	73	136	4.27e-24	88.6
MS.gene003586.t1	MTR_3g113310	57.576	66	27	1	20	85	42	106	1.48e-23	86.3
MS.gene003586.t1	MTR_4g072930	52.500	80	34	1	10	85	31	110	8.64e-23	84.7
MS.gene003586.t1	MTR_4g072280	54.667	75	28	1	1	69	1	75	6.77e-22	81.3
MS.gene003586.t1	MTR_3g117610	60.317	63	24	1	20	82	45	106	9.09e-22	82.0
MS.gene003586.t1	MTR_6g077850	56.923	65	28	0	20	84	34	98	2.46e-21	80.5
MS.gene003586.t1	MTR_4g072190	56.061	66	28	1	20	85	36	100	6.72e-21	79.3
MS.gene003586.t1	MTR_8g076040	55.385	65	28	1	18	82	39	102	2.46e-19	75.5
MS.gene003586.t1	MTR_5g021820	47.500	80	40	2	7	85	26	104	3.33e-19	75.1
MS.gene003586.t1	MTR_4g124750	48.649	74	37	1	12	85	61	133	4.53e-17	71.2
MS.gene003586.t1	MTR_2g043960	52.239	67	28	2	20	86	76	138	2.41e-16	69.3
MS.gene003586.t1	MTR_8g461400	44.444	90	19	3	1	85	1	64	2.57e-16	67.0
MS.gene003586.t1	MTR_1g009150	50.746	67	32	1	11	77	62	127	3.92e-16	69.3
MS.gene003586.t1	MTR_4g005310	47.059	68	35	1	14	80	56	123	4.12e-16	68.6
MS.gene003586.t1	MTR_4g005320	50.820	61	29	1	17	77	67	126	6.90e-15	65.9
MS.gene003586.t1	MTR_1g094750	49.180	61	30	1	20	80	50	109	8.82e-15	64.3
MS.gene003586.t1	MTR_1g024085	47.826	69	35	1	9	77	26	93	1.36e-14	64.7
MS.gene003586.t1	MTR_4g025830	44.118	68	34	2	20	84	79	145	3.04e-14	63.9
MS.gene003586.t1	MTR_3g109160	51.667	60	28	1	18	77	67	125	1.46e-13	62.4
MS.gene003586.t1	MTR_7g118010	40.741	81	40	3	2	80	10	84	5.76e-13	59.3
MS.gene003586.t1	MTR_7g101740	47.692	65	33	1	18	82	38	101	6.02e-13	59.7
MS.gene003586.t1	MTR_8g461210	46.667	60	31	1	18	77	33	91	2.13e-12	58.2
MS.gene003586.t1	MTR_1g063950	45.902	61	32	1	20	80	48	107	2.73e-12	58.2
MS.gene003586.t1	MTR_4g072160	48.387	62	29	2	20	80	37	96	3.26e-12	58.2
MS.gene003586.t1	MTR_7g104950	33.766	77	50	1	10	86	40	115	4.23e-12	57.8
MS.gene003586.t1	MTR_3g092220	50.000	60	27	2	20	77	33	91	5.40e-12	57.0
MS.gene003586.t1	MTR_8g026730	44.262	61	31	2	19	77	26	85	6.75e-12	56.6
MS.gene003586.t1	MTR_1g059770	35.211	71	45	1	16	86	45	114	8.42e-12	57.0
MS.gene003586.t1	MTR_3g105900	71.429	35	10	0	20	54	1172	1206	9.18e-12	59.3
MS.gene003586.t1	MTR_1g061570	46.970	66	34	1	12	77	11	75	9.32e-12	56.6
MS.gene003586.t1	MTR_2g066830	39.706	68	36	2	5	72	47	109	1.53e-11	56.6
MS.gene003586.t1	MTR_2g095430	40.845	71	37	2	7	73	32	101	1.67e-11	56.2
MS.gene003586.t1	MTR_7g405740	37.838	74	45	1	7	80	54	126	2.12e-11	56.6
MS.gene003586.t1	MTR_4g021810	47.761	67	33	2	12	77	18	83	2.29e-11	55.1
MS.gene003586.t1	MTR_8g096470	43.333	60	33	1	21	80	47	105	4.73e-11	54.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003586.t1	AT5G18050	64.474	76	26	1	11	85	15	90	3.60e-32	107
MS.gene003586.t1	AT5G18020	64.474	76	26	1	11	85	15	90	4.22e-32	107
MS.gene003586.t1	AT5G18060	64.474	76	26	1	11	85	15	90	1.27e-31	106
MS.gene003586.t1	AT4G38840	71.642	67	18	1	20	85	33	99	1.28e-31	106
MS.gene003586.t1	AT5G18080	64.474	76	26	1	11	85	15	90	1.33e-31	106
MS.gene003586.t1	AT5G18030	58.537	82	33	1	5	85	7	88	1.84e-30	103
MS.gene003586.t1	AT5G18010	61.842	76	28	1	11	85	15	90	1.72e-29	100
MS.gene003586.t1	AT2G21200	62.338	77	27	2	9	84	11	86	2.49e-29	100
MS.gene003586.t1	AT2G21210	55.789	95	30	3	1	84	1	94	2.69e-29	100
MS.gene003586.t1	AT4G34810	60.976	82	27	2	9	85	37	118	6.02e-29	100
MS.gene003586.t1	AT3G03840	55.172	87	31	2	1	85	14	94	7.71e-29	99.4
MS.gene003586.t1	AT2G21210	55.789	95	30	3	1	84	68	161	1.19e-28	100
MS.gene003586.t1	AT4G38850	59.259	81	25	2	8	85	14	89	1.45e-28	98.6
MS.gene003586.t1	AT4G38825	61.765	68	25	1	19	85	22	89	4.78e-28	97.4
MS.gene003586.t1	AT4G34800	55.556	90	36	2	1	86	1	90	6.00e-28	97.1
MS.gene003586.t1	AT3G03820	53.409	88	32	2	1	85	14	95	7.99e-28	97.1
MS.gene003586.t1	AT4G34770	62.162	74	26	1	13	84	28	101	2.04e-27	96.3
MS.gene003586.t1	AT3G03850	55.294	85	36	1	3	85	8	92	1.17e-26	94.0
MS.gene003586.t1	AT4G13790	50.000	80	37	2	8	85	14	92	7.23e-25	89.4
MS.gene003586.t1	AT3G03830	60.294	68	24	1	21	85	25	92	1.26e-24	88.6
MS.gene003586.t1	AT4G34790	60.294	68	25	1	20	85	39	106	4.18e-23	85.5
MS.gene003586.t1	AT4G38860	57.576	66	28	0	20	85	40	105	1.48e-22	84.0
MS.gene003586.t1	AT4G34780	50.000	80	37	1	9	85	17	96	5.50e-22	82.4
MS.gene003586.t1	AT1G75580	59.091	66	26	1	20	85	44	108	2.68e-21	80.9
MS.gene003586.t1	AT2G21220	55.385	65	28	1	20	84	40	103	1.98e-20	78.6
MS.gene003586.t1	AT4G34760	54.545	66	29	1	20	85	43	107	3.07e-20	78.2
MS.gene003586.t1	AT2G16580	54.545	66	29	1	20	85	44	108	9.07e-20	77.0
MS.gene003586.t1	AT1G19830	59.701	67	25	2	20	85	48	113	5.08e-19	75.1
MS.gene003586.t1	AT4G36110	53.846	65	29	1	18	82	38	101	2.35e-18	73.2
MS.gene003586.t1	AT2G18010	55.556	63	27	1	20	82	48	109	7.67e-18	72.0
MS.gene003586.t1	AT3G43120	52.239	67	28	2	20	86	79	141	1.32e-17	72.8
MS.gene003586.t1	AT5G66260	46.753	77	40	1	9	85	23	98	2.48e-16	67.8
MS.gene003586.t1	AT5G20810	52.239	67	28	2	20	86	79	141	5.95e-16	68.6
MS.gene003586.t1	AT3G51200	49.254	67	33	1	14	80	34	99	8.02e-16	66.6
MS.gene003586.t1	AT5G20810	52.239	67	28	2	20	86	79	141	9.59e-16	68.6
MS.gene003586.t1	AT3G20220	43.662	71	38	2	11	80	38	107	2.52e-15	65.9
MS.gene003586.t1	AT3G60690	43.662	71	36	2	18	85	86	155	2.09e-14	64.7
MS.gene003586.t1	AT2G45210	42.466	73	38	2	15	84	74	145	2.71e-14	64.3
MS.gene003586.t1	AT5G10990	41.573	89	41	3	4	86	29	112	6.02e-14	63.2
MS.gene003586.t1	AT2G37030	49.180	61	30	1	20	80	49	108	1.11e-13	61.6
MS.gene003586.t1	AT4G31320	47.143	70	36	1	8	77	68	136	1.47e-13	62.8
MS.gene003586.t1	AT2G24400	47.143	70	36	1	8	77	52	120	1.47e-13	62.8
MS.gene003586.t1	AT1G75590	47.059	68	34	2	11	77	32	98	1.22e-12	59.7
MS.gene003586.t1	AT4G34750	43.284	67	37	1	11	77	28	93	1.33e-12	59.7
MS.gene003586.t1	AT4G34750	43.284	67	37	1	11	77	28	93	1.33e-12	59.7
MS.gene003586.t1	AT3G61900	40.845	71	38	2	10	77	20	89	2.14e-12	58.5
MS.gene003586.t1	AT1G19840	47.143	70	35	2	9	77	29	97	7.10e-12	57.8
MS.gene003586.t1	AT2G46690	41.096	73	38	3	8	77	13	83	1.10e-11	56.6
MS.gene003586.t1	AT1G56150	41.270	63	36	1	10	72	28	89	1.28e-11	56.2
MS.gene003586.t1	AT3G12830	41.429	70	38	2	3	72	35	101	1.44e-11	56.6
MS.gene003586.t1	AT4G09530	41.429	70	38	2	14	80	22	91	1.66e-11	55.5
MS.gene003586.t1	AT4G12410	39.189	74	41	2	14	84	70	142	2.76e-11	56.2
MS.gene003586.t1	AT3G53250	42.623	61	31	1	20	80	52	108	3.06e-11	55.5
MS.gene003586.t1	AT4G00880	48.387	62	29	2	18	77	26	86	4.05e-11	55.1

Find 19 sgRNAs with CRISPR-Local

Find 20 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATCAAGCAGAAGAAGAATT+TGG	0.279041	4.1:+30736070	MS.gene003586:CDS
CTTTCTTACAACTCTCTTCT+CGG	0.306926	4.1:+30736140	MS.gene003586:CDS
TTCGCTTATCTGGTATTAGA+AGG	0.346910	4.1:+30735921	MS.gene003586:CDS
TAAACTGCGAGGTAGCCTTT+TGG	0.378136	4.1:-30735974	None:intergenic
AAGCTGGTTCAATATTGAAA+TGG	0.380921	4.1:-30736029	None:intergenic
AGCTGGTTCAATATTGAAAT+GGG	0.445913	4.1:-30736028	None:intergenic
ATTTGGATATGATCATCCTA+TGG	0.456415	4.1:+30736087	MS.gene003586:CDS
GTAATTCTTGAAATGAAAGC+TGG	0.496692	4.1:-30736045	None:intergenic
TAAGAAAGCATCTTCACTGC+AGG	0.497337	4.1:-30736125	None:intergenic
TGGGATTGCATCCACAGCCT+TGG	0.507805	4.1:-30735954	None:intergenic
GTCATCATCTTCCAAGGCTG+TGG	0.512173	4.1:+30735943	MS.gene003586:CDS
GGCTACCTCGCAGTTTATGT+TGG	0.513695	4.1:+30735980	MS.gene003586:CDS
GCTGTGGATGCAATCCCAAA+AGG	0.559098	4.1:+30735959	MS.gene003586:CDS
TTTGGATATGATCATCCTAT+GGG	0.586077	4.1:+30736088	MS.gene003586:CDS
TAGAAGGTCATCATCTTCCA+AGG	0.592917	4.1:+30735937	MS.gene003586:CDS
AAGAAAGCATCTTCACTGCA+GGG	0.633693	4.1:-30736124	None:intergenic
GGATATGATCATCCTATGGG+TGG	0.645721	4.1:+30736091	MS.gene003586:CDS
GGAATTGTGAGACCACCCAT+AGG	0.657747	4.1:-30736103	None:intergenic
TTTCTCCAACATAAACTGCG+AGG	0.736972	4.1:-30735985	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	ATTTGGATATGATCATCCTA+TGG	+	chr4.1:30736087-30736106	MS.gene003586:CDS	30.0%
	GTAATTCTTGAAATGAAAGC+TGG	-	chr4.1:30736048-30736067	None:intergenic	30.0%
	TTTGGATATGATCATCCTAT+GGG	+	chr4.1:30736088-30736107	MS.gene003586:CDS	30.0%
!	AAGCTGGTTCAATATTGAAA+TGG	-	chr4.1:30736032-30736051	None:intergenic	30.0%
!	AGCTGGTTCAATATTGAAAT+GGG	-	chr4.1:30736031-30736050	None:intergenic	30.0%
	CATCAAGCAGAAGAAGAATT+TGG	+	chr4.1:30736070-30736089	MS.gene003586:CDS	35.0%
	CTTTCTTACAACTCTCTTCT+CGG	+	chr4.1:30736140-30736159	MS.gene003586:CDS	35.0%
	TTCGCTTATCTGGTATTAGA+AGG	+	chr4.1:30735921-30735940	MS.gene003586:CDS	35.0%
	TAGAAGGTCATCATCTTCCA+AGG	+	chr4.1:30735937-30735956	MS.gene003586:CDS	40.0%
	TTTCTCCAACATAAACTGCG+AGG	-	chr4.1:30735988-30736007	None:intergenic	40.0%
!!	AAGAAAGCATCTTCACTGCA+GGG	-	chr4.1:30736127-30736146	None:intergenic	40.0%
!!	TAAGAAAGCATCTTCACTGC+AGG	-	chr4.1:30736128-30736147	None:intergenic	40.0%
	GGATATGATCATCCTATGGG+TGG	+	chr4.1:30736091-30736110	MS.gene003586:CDS	45.0%
!	AAACTGCGAGGTAGCCTTTT+GGG	-	chr4.1:30735976-30735995	None:intergenic	45.0%
!	TAAACTGCGAGGTAGCCTTT+TGG	-	chr4.1:30735977-30735996	None:intergenic	45.0%
	GCTGTGGATGCAATCCCAAA+AGG	+	chr4.1:30735959-30735978	MS.gene003586:CDS	50.0%
	GGAATTGTGAGACCACCCAT+AGG	-	chr4.1:30736106-30736125	None:intergenic	50.0%
	GGCTACCTCGCAGTTTATGT+TGG	+	chr4.1:30735980-30735999	MS.gene003586:CDS	50.0%
	GTCATCATCTTCCAAGGCTG+TGG	+	chr4.1:30735943-30735962	MS.gene003586:CDS	50.0%
	TGGGATTGCATCCACAGCCT+TGG	-	chr4.1:30735957-30735976	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	30735914	30736174	30735914	ID=MS.gene003586
chr4.1	mRNA	30735914	30736174	30735914	ID=MS.gene003586.t1;Parent=MS.gene003586
chr4.1	exon	30735914	30736174	30735914	ID=MS.gene003586.t1.exon1;Parent=MS.gene003586.t1
chr4.1	CDS	30735914	30736174	30735914	ID=cds.MS.gene003586.t1;Parent=MS.gene003586.t1

Gene Sequence	>MS.gene003586 ATGGGTTTTCGCTTATCTGGTATTAGAAGGTCATCATCTTCCAAGGCTGTGGATGCAATCCCAAAAGGCTACCTCGCAGTTTATGTTGGAGAAAAAATGAAGCGATTTGTGATTCCCATTTCAATATTGAACCAGCTTTCATTTCAAGAATTACTACATCAAGCAGAAGAAGAATTTGGATATGATCATCCTATGGGTGGTCTCACAATTCCCTGCAGTGAAGATGCTTTCTTACAACTCTCTTCTCGGCTTCAGTGTTAA
Protein sequence	>MS.gene003586.t1 MGFRLSGIRRSSSSKAVDAIPKGYLAVYVGEKMKRFVIPISILNQLSFQELLHQAEEEFGYDHPMGGLTIPCSEDAFLQLSSRLQC