AlfalfaGEDB | MS.gene057778

M. sativa cultivar XinJiangDaYe / MS.gene057778

KEGG: -
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057778.t1	RHN61450.1	96.8	93	3	0	1	93	1	93	2.00E-44	188

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057778.t1	P33083	79.1	91	18	1	1	91	1	90	2.5e-35	149.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057778.t1	A0A396I775	96.8	93	3	0	1	93	1	93	1.5e-44	188.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene057816	MS.gene057778	PPI
MS.gene057778	MS.gene057799	PPI
MS.gene50772	MS.gene057778	PPI
MS.gene057778	MS.gene50688	PPI
MS.gene057778	MS.gene003603	PPI
MS.gene057778	MS.gene003630	PPI
MS.gene057778	MS.gene062966	PPI
MS.gene057778	MS.gene062980	PPI
MS.gene057778	MS.gene50673	PPI
MS.gene057778	MS.gene23367	PPI
MS.gene057778	MS.gene50664	PPI
MS.gene057778	MS.gene003610	PPI
MS.gene057778	MS.gene50771	PPI
MS.gene057778	MS.gene057802	PPI
MS.gene057778	MS.gene50773	PPI
MS.gene057778	MS.gene057796	PPI
MS.gene057778	MS.gene50682	PPI
MS.gene50683	MS.gene057778	PPI
MS.gene057778	MS.gene003597	PPI
MS.gene057807	MS.gene057778	PPI
MS.gene057778	MS.gene50690	PPI
MS.gene057778	MS.gene057806	PPI
MS.gene057778	MS.gene057780	PPI
MS.gene057778	MS.gene057788	PPI
MS.gene057778	MS.gene062944	PPI
MS.gene057778	MS.gene50658	PPI
MS.gene057778	MS.gene50655	PPI
MS.gene057778	MS.gene28863	PPI
MS.gene057778	MS.gene50685	PPI
MS.gene057778	MS.gene003613	PPI
MS.gene057778	MS.gene003584	PPI
MS.gene057778	MS.gene057791	PPI
MS.gene057778	MS.gene50674	PPI
MS.gene062946	MS.gene057778	PPI
MS.gene057805	MS.gene057778	PPI
MS.gene057778	MS.gene057782	PPI
MS.gene057778	MS.gene057779	PPI
MS.gene062971	MS.gene057778	PPI
MS.gene23373	MS.gene057778	PPI
MS.gene057778	MS.gene062965	PPI
MS.gene50657	MS.gene057778	PPI
MS.gene057778	MS.gene022358	PPI
MS.gene057778	MS.gene062953	PPI
MS.gene062975	MS.gene057778	PPI
MS.gene057778	MS.gene062954	PPI
MS.gene50689	MS.gene057778	PPI
MS.gene057778	MS.gene23369	PPI
MS.gene057778	MS.gene062986	PPI
MS.gene057778	MS.gene057783	PPI
MS.gene003576	MS.gene057778	PPI
MS.gene057778	MS.gene50770	PPI
MS.gene057778	MS.gene062987	PPI
MS.gene057778	MS.gene057811	PPI
MS.gene057778	MS.gene057817	PPI
MS.gene057778	MS.gene70684	PPI
MS.gene057778	MS.gene062964	PPI
MS.gene057778	MS.gene77525	PPI
MS.gene057778	MS.gene057777	PPI
MS.gene003626	MS.gene057778	PPI
MS.gene057778	MS.gene062945	PPI
MS.gene062970	MS.gene057778	PPI
MS.gene057778	MS.gene057804	PPI
MS.gene062942	MS.gene057778	PPI
MS.gene057778	MS.gene50651	PPI
MS.gene003605	MS.gene057778	PPI
MS.gene057778	MS.gene003607	PPI
MS.gene057778	MS.gene50656	PPI
MS.gene057778	MS.gene003606	PPI
MS.gene057778	MS.gene062969	PPI
MS.gene057778	MS.gene50686	PPI
MS.gene057778	MS.gene70683	PPI
MS.gene057778	MS.gene062962	PPI
MS.gene057778	MS.gene50666	PPI
MS.gene057778	MS.gene062985	PPI
MS.gene057778	MS.gene057784	PPI
MS.gene062972	MS.gene057778	PPI
MS.gene057778	MS.gene50669	PPI
MS.gene057778	MS.gene003622	PPI
MS.gene003582	MS.gene057778	PPI
MS.gene057778	MS.gene003599	PPI
MS.gene057778	MS.gene23368	PPI
MS.gene057778	MS.gene003585	PPI
MS.gene057778	MS.gene003623	PPI
MS.gene057778	MS.gene50668	PPI
MS.gene057778	MS.gene003581	PPI
MS.gene057778	MS.gene062958	PPI
MS.gene057778	MS.gene003628	PPI
MS.gene057778	MS.gene057798	PPI
MS.gene057778	MS.gene003612	PPI
MS.gene057778	MS.gene057794	PPI
MS.gene057778	MS.gene003629	PPI
MS.gene057778	MS.gene062983	PPI
MS.gene057809	MS.gene057778	PPI
MS.gene057778	MS.gene062967	PPI
MS.gene057778	MS.gene003579	PPI
MS.gene062978	MS.gene057778	PPI
MS.gene057778	MS.gene062940	PPI
MS.gene057778	MS.gene062989	PPI
MS.gene057778	MS.gene003595	PPI
MS.gene057778	MS.gene062959	PPI
MS.gene057778	MS.gene057785	PPI
MS.gene003593	MS.gene057778	PPI
MS.gene057778	MS.gene50670	PPI
MS.gene057778	MS.gene057800	PPI
MS.gene057778	MS.gene50653	PPI
MS.gene057778	MS.gene003598	PPI
MS.gene057778	MS.gene70685	PPI
MS.gene003580	MS.gene057778	PPI
MS.gene057778	MS.gene062941	PPI
MS.gene057778	MS.gene50662	PPI
MS.gene057778	MS.gene50660	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057778.t1	MTR_4g072880	95.699	93	4	0	1	93	1	93	1.14e-62	185
MS.gene057778.t1	MTR_4g072310	89.247	93	10	0	1	93	1	93	4.72e-60	178
MS.gene057778.t1	MTR_4g072270	88.172	93	11	0	1	93	1	93	3.61e-58	173
MS.gene057778.t1	MTR_4g072230	84.946	93	12	1	1	93	1	91	5.19e-55	165
MS.gene057778.t1	MTR_4g072860	80.645	93	18	0	1	93	1	93	2.21e-53	161
MS.gene057778.t1	MTR_4g072250	80.645	93	17	1	1	93	1	92	1.29e-52	159
MS.gene057778.t1	MTR_3g084150	77.419	93	20	1	1	93	1	92	7.87e-50	152
MS.gene057778.t1	MTR_3g084180	76.344	93	21	1	1	93	1	92	4.41e-49	150
MS.gene057778.t1	MTR_4g072500	72.043	93	25	1	1	93	1	92	3.51e-48	148
MS.gene057778.t1	MTR_3g084170	75.269	93	22	1	1	93	1	92	3.67e-48	148
MS.gene057778.t1	MTR_8g461410	74.194	93	23	1	1	93	1	92	3.67e-48	148
MS.gene057778.t1	MTR_4g072640	74.725	91	22	1	1	91	1	90	1.25e-47	147
MS.gene057778.t1	MTR_3g084240	74.194	93	23	1	1	93	1	92	3.88e-47	145
MS.gene057778.t1	MTR_4g072240	72.527	91	25	0	1	91	1	91	5.84e-47	145
MS.gene057778.t1	MTR_3g110038	73.118	93	24	1	1	93	1	92	1.16e-46	144
MS.gene057778.t1	MTR_4g072480	72.043	93	25	1	1	93	1	92	2.65e-46	143
MS.gene057778.t1	MTR_3g110032	70.968	93	27	0	1	93	1	93	2.79e-46	143
MS.gene057778.t1	MTR_3g117630	74.444	90	23	0	4	93	3	92	3.97e-46	143
MS.gene057778.t1	MTR_4g050700	69.892	93	28	0	1	93	1	93	5.04e-46	142
MS.gene057778.t1	MTR_2g012410	69.892	93	28	0	1	93	1	93	5.04e-46	142
MS.gene057778.t1	MTR_4g072530	70.330	91	26	1	1	91	1	90	5.49e-46	142
MS.gene057778.t1	MTR_4g072570	70.968	93	26	1	1	93	1	92	6.88e-46	142
MS.gene057778.t1	MTR_4g072620	70.968	93	26	1	1	93	1	92	7.34e-46	142
MS.gene057778.t1	MTR_3g084220	72.043	93	25	1	1	93	1	92	1.29e-45	142
MS.gene057778.t1	MTR_4g072680	70.968	93	26	1	1	93	1	92	1.42e-45	141
MS.gene057778.t1	MTR_4g072460	70.968	93	26	1	1	93	1	92	1.64e-45	141
MS.gene057778.t1	MTR_4g072370	72.527	91	22	1	1	91	1	88	2.94e-45	140
MS.gene057778.t1	MTR_4g072870	70.330	91	27	0	1	91	1	91	3.17e-45	140
MS.gene057778.t1	MTR_4g072730	70.652	92	26	1	1	92	1	91	4.16e-45	140
MS.gene057778.t1	MTR_4g072220	68.817	93	29	0	1	93	1	93	4.33e-45	140
MS.gene057778.t1	MTR_4g072850	77.660	94	20	1	1	93	1	94	5.38e-45	140
MS.gene057778.t1	MTR_4g072300	69.231	91	28	0	1	91	1	91	1.66e-44	139
MS.gene057778.t1	MTR_3g084260	67.742	93	30	0	1	93	1	93	3.60e-44	138
MS.gene057778.t1	MTR_3g084250	68.817	93	28	1	1	93	1	92	4.21e-44	138
MS.gene057778.t1	MTR_4g072740	73.626	91	18	1	1	91	1	85	4.35e-44	137
MS.gene057778.t1	MTR_4g072580	72.527	91	19	1	1	91	1	85	5.69e-44	137
MS.gene057778.t1	MTR_3g110042	73.864	88	22	1	1	88	1	87	1.07e-43	137
MS.gene057778.t1	MTR_4g072490	72.527	91	19	1	1	91	1	85	2.23e-43	135
MS.gene057778.t1	MTR_4g072830	72.222	90	22	1	1	90	1	87	4.20e-43	135
MS.gene057778.t1	MTR_4g072330	67.033	91	27	1	1	91	1	88	8.28e-43	134
MS.gene057778.t1	MTR_4g072260	65.591	93	32	0	1	93	1	93	2.08e-42	134
MS.gene057778.t1	MTR_4g072890	67.033	91	30	0	1	91	1	91	2.92e-42	133
MS.gene057778.t1	MTR_4g072290	68.817	93	15	1	1	93	1	79	4.88e-42	132
MS.gene057778.t1	MTR_5g008360	74.684	79	20	0	15	93	5	83	7.79e-42	132
MS.gene057778.t1	MTR_4g072660	67.742	93	24	1	1	93	1	87	1.36e-41	131
MS.gene057778.t1	MTR_4g072470	69.231	91	22	1	1	91	1	85	1.53e-41	131
MS.gene057778.t1	MTR_4g072610	71.429	91	19	1	1	91	1	84	3.07e-41	130
MS.gene057778.t1	MTR_4g072940	72.826	92	24	1	3	93	33	124	9.77e-41	130
MS.gene057778.t1	MTR_4g072630	68.132	91	24	1	1	91	1	86	2.21e-40	128
MS.gene057778.t1	MTR_4g072465	68.132	91	24	1	1	91	1	86	6.92e-40	127
MS.gene057778.t1	MTR_4g072540	70.330	91	22	1	1	91	1	86	2.17e-39	125
MS.gene057778.t1	MTR_4g072600	67.033	91	24	1	1	91	1	85	2.21e-39	125
MS.gene057778.t1	MTR_5g008370	69.474	95	22	2	1	92	1	91	2.30e-39	127
MS.gene057778.t1	MTR_4g072820	68.478	92	21	2	1	91	1	85	3.11e-39	125
MS.gene057778.t1	MTR_4g072650	69.231	91	21	2	1	91	1	84	5.94e-39	125
MS.gene057778.t1	MTR_3g084210	67.742	93	29	1	1	93	1	92	9.11e-39	124
MS.gene057778.t1	MTR_3g084190	69.892	93	27	1	1	93	1	92	1.70e-38	124
MS.gene057778.t1	MTR_4g072380	68.478	92	22	2	1	91	1	86	3.38e-38	123
MS.gene057778.t1	MTR_3g084160	67.742	93	29	1	1	93	1	92	6.70e-38	122
MS.gene057778.t1	MTR_8g461420	69.231	91	27	1	1	91	1	90	8.63e-38	122
MS.gene057778.t1	MTR_4g072720	81.429	70	13	0	22	91	17	86	9.32e-38	122
MS.gene057778.t1	MTR_4g072670	67.033	91	25	1	1	91	1	86	9.74e-38	122
MS.gene057778.t1	MTR_3g084230	69.231	91	27	1	1	91	1	90	1.96e-37	121
MS.gene057778.t1	MTR_4g072550	75.342	73	18	0	21	93	31	103	2.04e-37	121
MS.gene057778.t1	MTR_3g110045	68.132	91	28	1	3	93	62	151	3.04e-36	120
MS.gene057778.t1	MTR_4g072510	67.033	91	25	1	1	91	1	86	3.25e-36	118
MS.gene057778.t1	MTR_4g072590	69.231	91	22	1	1	91	1	85	1.08e-35	116
MS.gene057778.t1	MTR_3g084200	72.603	73	19	1	1	73	1	72	7.15e-35	115
MS.gene057778.t1	MTR_5g008350	67.500	80	20	1	1	80	1	74	3.62e-34	112
MS.gene057778.t1	MTR_4g072560	54.082	98	38	3	1	91	1	98	7.02e-33	110
MS.gene057778.t1	MTR_4g072910	57.447	94	34	1	4	91	7	100	1.03e-32	109
MS.gene057778.t1	MTR_4g072690	62.637	91	28	1	1	91	1	85	4.39e-32	107
MS.gene057778.t1	MTR_4g072450	61.538	91	29	1	1	91	1	85	3.09e-31	105
MS.gene057778.t1	MTR_4g072980	53.684	95	42	2	1	93	1	95	3.56e-31	105
MS.gene057778.t1	MTR_4g072770	71.212	66	19	0	26	91	15	80	4.04e-30	102
MS.gene057778.t1	MTR_4g072750	59.302	86	30	3	1	82	1	85	6.94e-30	102
MS.gene057778.t1	MTR_3g117640	49.505	101	42	2	1	92	1	101	3.05e-29	100
MS.gene057778.t1	MTR_3g110035	61.039	77	29	1	17	93	63	138	3.68e-28	99.4
MS.gene057778.t1	MTR_4g072280	58.667	75	31	0	1	75	1	75	9.02e-28	96.7
MS.gene057778.t1	MTR_3g113310	48.315	89	39	2	8	90	18	105	2.35e-27	96.3
MS.gene057778.t1	MTR_3g117610	51.648	91	35	2	8	90	19	108	3.36e-27	95.9
MS.gene057778.t1	MTR_4g072190	55.556	81	33	2	8	88	20	97	3.74e-27	95.5
MS.gene057778.t1	MTR_6g077850	45.455	88	47	1	4	91	13	99	9.08e-27	94.7
MS.gene057778.t1	MTR_5g021820	51.724	87	37	2	8	90	18	103	1.21e-25	92.0
MS.gene057778.t1	MTR_8g461400	52.688	93	17	2	1	93	1	66	2.29e-25	90.1
MS.gene057778.t1	MTR_8g076040	51.765	85	36	2	8	88	19	102	6.29e-25	90.1
MS.gene057778.t1	MTR_4g072930	48.235	85	40	1	11	91	26	110	9.92e-24	87.4
MS.gene057778.t1	MTR_4g072840	48.913	92	14	3	1	91	1	60	5.83e-20	76.3
MS.gene057778.t1	MTR_1g024085	52.857	70	29	2	15	84	29	94	4.11e-18	73.9
MS.gene057778.t1	MTR_4g124750	53.030	66	30	1	25	90	68	132	2.35e-17	72.0
MS.gene057778.t1	MTR_2g043960	54.839	62	27	1	25	86	75	135	5.98e-17	71.2
MS.gene057778.t1	MTR_3g092220	44.156	77	40	2	17	91	24	99	6.06e-17	70.1
MS.gene057778.t1	MTR_4g025830	48.529	68	31	2	26	90	79	145	3.41e-16	69.3
MS.gene057778.t1	MTR_7g118010	50.000	68	31	2	26	91	23	89	4.13e-16	67.8
MS.gene057778.t1	MTR_4g005310	50.000	70	31	2	16	84	55	121	4.34e-16	68.9
MS.gene057778.t1	MTR_1g061570	43.529	85	44	2	8	92	4	84	5.69e-16	67.8
MS.gene057778.t1	MTR_1g009150	49.296	71	35	1	16	86	61	130	7.53e-16	68.9
MS.gene057778.t1	MTR_1g094750	45.455	77	37	2	11	83	31	106	9.81e-16	67.0
MS.gene057778.t1	MTR_1g063950	46.377	69	36	1	15	83	37	104	2.27e-15	66.2
MS.gene057778.t1	MTR_0388s0020	44.444	72	36	2	20	88	69	139	6.39e-15	65.9
MS.gene057778.t1	MTR_4g072160	50.000	68	33	1	23	90	34	100	1.17e-14	64.7
MS.gene057778.t1	MTR_8g026730	50.820	61	27	2	26	84	27	86	1.25e-14	63.9
MS.gene057778.t1	MTR_8g461210	40.659	91	50	3	4	92	14	102	2.23e-14	63.5
MS.gene057778.t1	MTR_3g109160	49.254	67	33	1	26	92	69	134	2.36e-14	64.7
MS.gene057778.t1	MTR_4g005320	49.180	61	30	1	26	86	70	129	3.46e-14	64.3
MS.gene057778.t1	MTR_7g101740	46.875	64	33	1	25	88	39	101	1.27e-13	61.6
MS.gene057778.t1	MTR_1g059770	40.000	65	38	1	26	90	49	112	2.75e-13	61.2
MS.gene057778.t1	MTR_3g098970	35.802	81	50	2	13	93	41	119	3.45e-13	61.2
MS.gene057778.t1	MTR_3g105900	75.000	36	9	0	25	60	1171	1206	3.74e-13	63.5
MS.gene057778.t1	MTR_8g101520	36.782	87	50	2	9	91	29	114	3.78e-12	58.9
MS.gene057778.t1	MTR_7g405740	37.931	87	47	3	5	91	52	131	4.33e-12	58.5
MS.gene057778.t1	MTR_7g104940	40.323	62	36	1	29	90	53	113	1.20e-11	57.0
MS.gene057778.t1	MTR_2g095430	45.588	68	30	3	17	78	34	100	1.30e-11	56.6
MS.gene057778.t1	MTR_7g104950	34.722	72	46	1	17	88	41	111	8.33e-11	54.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057778.t1	AT4G38840	65.882	85	28	1	8	91	15	99	1.39e-34	114
MS.gene057778.t1	AT5G18020	67.105	76	24	1	17	91	15	90	1.64e-33	111
MS.gene057778.t1	AT5G18060	67.105	76	24	1	17	91	15	90	2.49e-33	110
MS.gene057778.t1	AT5G18080	67.105	76	24	1	17	91	15	90	5.25e-33	110
MS.gene057778.t1	AT5G18050	64.474	76	26	1	17	91	15	90	2.16e-32	108
MS.gene057778.t1	AT2G21200	70.423	71	20	1	21	90	16	86	2.17e-32	108
MS.gene057778.t1	AT3G03840	61.628	86	28	2	9	92	13	95	3.46e-32	108
MS.gene057778.t1	AT5G18030	67.568	74	23	1	19	91	15	88	6.44e-32	107
MS.gene057778.t1	AT4G38825	66.667	72	23	1	21	91	18	89	2.44e-31	105
MS.gene057778.t1	AT5G18010	63.158	76	27	1	17	91	15	90	4.02e-31	105
MS.gene057778.t1	AT3G03820	56.383	94	35	2	2	92	6	96	7.09e-31	104
MS.gene057778.t1	AT4G38850	59.770	87	22	2	8	91	13	89	1.83e-30	103
MS.gene057778.t1	AT3G03850	70.588	68	18	1	27	92	26	93	3.05e-30	103
MS.gene057778.t1	AT2G21210	62.162	74	26	1	20	91	22	95	3.88e-30	103
MS.gene057778.t1	AT4G34770	61.842	76	27	1	19	92	28	103	1.79e-29	101
MS.gene057778.t1	AT2G21210	62.162	74	26	1	20	91	89	162	2.12e-29	103
MS.gene057778.t1	AT3G03830	57.955	88	30	2	11	91	5	92	7.91e-29	99.8
MS.gene057778.t1	AT4G34810	58.750	80	27	3	17	90	38	117	1.33e-28	99.8
MS.gene057778.t1	AT4G38860	52.941	85	36	1	8	88	18	102	2.85e-27	95.9
MS.gene057778.t1	AT4G13790	54.118	85	31	3	8	90	13	91	3.07e-27	95.5
MS.gene057778.t1	AT4G34800	52.326	86	33	2	1	83	1	81	6.53e-27	94.7
MS.gene057778.t1	AT4G34760	50.575	87	36	2	8	88	19	104	3.68e-26	93.2
MS.gene057778.t1	AT2G21220	61.538	65	24	1	24	88	38	101	1.23e-25	92.0
MS.gene057778.t1	AT1G75580	48.352	91	38	2	8	90	18	107	1.77e-25	91.7
MS.gene057778.t1	AT1G19830	48.958	96	35	3	8	90	18	112	1.46e-23	87.0
MS.gene057778.t1	AT4G34780	45.745	94	45	2	4	91	3	96	3.35e-23	85.9
MS.gene057778.t1	AT4G36110	48.193	83	40	2	8	88	20	101	6.66e-23	85.1
MS.gene057778.t1	AT4G34790	59.701	67	24	2	26	89	39	105	9.23e-23	84.7
MS.gene057778.t1	AT2G16580	47.727	88	38	2	8	88	19	105	1.34e-22	84.3
MS.gene057778.t1	AT2G18010	56.250	64	27	1	25	88	47	109	7.06e-21	80.1
MS.gene057778.t1	AT5G66260	45.349	86	44	2	8	91	14	98	5.12e-20	77.4
MS.gene057778.t1	AT3G20220	48.684	76	37	2	15	89	36	110	2.28e-19	76.3
MS.gene057778.t1	AT3G43120	53.226	62	28	1	25	86	78	138	3.29e-17	72.0
MS.gene057778.t1	AT2G46690	44.048	84	42	3	13	92	10	92	5.62e-17	70.5
MS.gene057778.t1	AT5G20810	51.471	68	32	1	25	92	78	144	9.11e-17	70.9
MS.gene057778.t1	AT3G51200	51.562	64	29	2	21	83	34	96	1.02e-16	69.3
MS.gene057778.t1	AT1G75590	43.529	85	43	2	4	84	16	99	2.03e-16	69.7
MS.gene057778.t1	AT5G20810	53.030	66	30	1	25	90	78	142	2.34e-16	70.5
MS.gene057778.t1	AT4G34750	48.438	64	32	1	25	88	36	98	3.59e-16	68.9
MS.gene057778.t1	AT4G34750	48.438	64	32	1	25	88	36	98	3.59e-16	68.9
MS.gene057778.t1	AT2G45210	43.836	73	37	2	21	90	74	145	7.25e-16	68.6
MS.gene057778.t1	AT5G10990	50.000	60	29	1	25	84	40	98	1.02e-15	67.8
MS.gene057778.t1	AT3G61900	45.714	70	34	2	25	91	29	97	1.47e-15	67.0
MS.gene057778.t1	AT1G19840	50.000	68	31	2	19	84	32	98	2.09e-15	67.0
MS.gene057778.t1	AT4G31320	49.231	65	32	1	26	90	80	143	1.26e-14	65.9
MS.gene057778.t1	AT3G60690	43.836	73	37	2	22	91	84	155	1.76e-14	65.1
MS.gene057778.t1	AT4G00880	53.968	63	26	2	26	86	28	89	3.08e-14	63.5
MS.gene057778.t1	AT2G24400	50.000	66	32	1	26	91	64	128	4.02e-14	64.3
MS.gene057778.t1	AT2G37030	49.153	59	29	1	25	83	48	105	2.53e-13	61.2
MS.gene057778.t1	AT4G12410	45.588	68	33	2	26	90	76	142	5.98e-13	60.8
MS.gene057778.t1	AT5G53590	33.333	96	58	2	1	91	21	115	1.43e-12	59.7
MS.gene057778.t1	AT4G09530	42.254	71	35	3	17	84	22	89	3.66e-12	57.8
MS.gene057778.t1	AT2G36210	39.130	69	42	0	16	84	44	112	3.70e-12	58.5
MS.gene057778.t1	AT4G22620	41.667	72	38	2	22	90	75	145	3.82e-12	58.9
MS.gene057778.t1	AT3G09870	43.243	74	39	2	15	86	34	106	4.03e-12	57.8
MS.gene057778.t1	AT3G12830	38.571	70	42	1	17	86	41	109	8.68e-12	57.4
MS.gene057778.t1	AT3G03847	36.471	85	51	2	3	86	48	130	2.14e-11	56.2
MS.gene057778.t1	AT1G56150	37.037	81	49	2	7	86	18	97	2.84e-11	55.5

Find 24 sgRNAs with CRISPR-Local

Find 26 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCAGCAAGTCTTGAAATGA+AGG	0.414635	4.4:-36545101	None:intergenic
GGTTGGTTCAAGTATGATAC+AGG	0.420400	4.4:-36545080	None:intergenic
GTTCGGATATGATCATCCTA+TGG	0.453892	4.4:+36545139	MS.gene057778:CDS
TTATAACATCTCGCATGAAC+GGG	0.462448	4.4:+36545201	MS.gene057778:CDS
GGATATCTTGCAGTATATGT+TGG	0.514243	4.4:+36545032	MS.gene057778:CDS
AGTCAAGCTGAGGAAGAGTT+CGG	0.527489	4.4:+36545122	MS.gene057778:CDS
GTTTCCCTGGTATCATCAGA+AGG	0.529309	4.4:+36544958	MS.gene057778:CDS
CTTATAACATCTCGCATGAA+CGG	0.530410	4.4:+36545200	MS.gene057778:CDS
GCAAGTCTTGAAATGAAGGT+TGG	0.540897	4.4:-36545097	None:intergenic
TATACTGCAAGATATCCCTT+TGG	0.554191	4.4:-36545026	None:intergenic
GATATCTTCTGTGCAAGGAA+TGG	0.565702	4.4:-36545171	None:intergenic
GATGCCCTTCTGATGATACC+AGG	0.570722	4.4:-36544963	None:intergenic
AAAAGCTGTTGATGTGCCAA+AGG	0.571530	4.4:+36545010	MS.gene057778:CDS
AAAGCTGTTGATGTGCCAAA+GGG	0.580562	4.4:+36545011	MS.gene057778:CDS
TGAAAGATATCTTCTGTGCA+AGG	0.585498	4.4:-36545176	None:intergenic
TTCGGATATGATCATCCTAT+GGG	0.588379	4.4:+36545140	MS.gene057778:CDS
TTTCCCTGGTATCATCAGAA+GGG	0.622803	4.4:+36544959	MS.gene057778:CDS
CTTCTGTGCAAGGAATGGTA+AGG	0.633695	4.4:-36545166	None:intergenic
AGACTTGCTGAGTCAAGCTG+AGG	0.645081	4.4:+36545112	MS.gene057778:CDS
GGATATGATCATCCTATGGG+TGG	0.645829	4.4:+36545143	MS.gene057778:CDS
GGAATGGTAAGGCCACCCAT+AGG	0.649958	4.4:-36545155	None:intergenic
ATGCCCTTCTGATGATACCA+GGG	0.658200	4.4:-36544962	None:intergenic
GTTGGTTCAAGTATGATACA+GGG	0.701547	4.4:-36545079	None:intergenic
ATGTTGGAGAGAAACAGACG+CGG	0.843088	4.4:+36545048	MS.gene057778:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	CTTATAACATCTCGCATGAA+CGG	+	chr4.4:36545200-36545219	MS.gene057778:CDS	35.0%
	GGATATCTTGCAGTATATGT+TGG	+	chr4.4:36545032-36545051	MS.gene057778:CDS	35.0%
	TATACTGCAAGATATCCCTT+TGG	-	chr4.4:36545029-36545048	None:intergenic	35.0%
	TGAAAGATATCTTCTGTGCA+AGG	-	chr4.4:36545179-36545198	None:intergenic	35.0%
	TTATAACATCTCGCATGAAC+GGG	+	chr4.4:36545201-36545220	MS.gene057778:CDS	35.0%
	TTCGGATATGATCATCCTAT+GGG	+	chr4.4:36545140-36545159	MS.gene057778:CDS	35.0%
!	GTTGGTTCAAGTATGATACA+GGG	-	chr4.4:36545082-36545101	None:intergenic	35.0%
	AAAAGCTGTTGATGTGCCAA+AGG	+	chr4.4:36545010-36545029	MS.gene057778:CDS	40.0%
	AAAGCTGTTGATGTGCCAAA+GGG	+	chr4.4:36545011-36545030	MS.gene057778:CDS	40.0%
	CTCAGCAAGTCTTGAAATGA+AGG	-	chr4.4:36545104-36545123	None:intergenic	40.0%
	GATATCTTCTGTGCAAGGAA+TGG	-	chr4.4:36545174-36545193	None:intergenic	40.0%
	GCAAGTCTTGAAATGAAGGT+TGG	-	chr4.4:36545100-36545119	None:intergenic	40.0%
	GTTCGGATATGATCATCCTA+TGG	+	chr4.4:36545139-36545158	MS.gene057778:CDS	40.0%
	TTTCCCTGGTATCATCAGAA+GGG	+	chr4.4:36544959-36544978	MS.gene057778:CDS	40.0%
!	GGTTGGTTCAAGTATGATAC+AGG	-	chr4.4:36545083-36545102	None:intergenic	40.0%
!!!	ATCAGAAGGGCATCTTTTTC+TGG	+	chr4.4:36544972-36544991	MS.gene057778:CDS	40.0%
!!!	CAACAGCTTTTGAAGCTGAT+CGG	-	chr4.4:36545001-36545020	None:intergenic	40.0%
	AGTCAAGCTGAGGAAGAGTT+CGG	+	chr4.4:36545122-36545141	MS.gene057778:CDS	45.0%
	ATGCCCTTCTGATGATACCA+GGG	-	chr4.4:36544965-36544984	None:intergenic	45.0%
	ATGTTGGAGAGAAACAGACG+CGG	+	chr4.4:36545048-36545067	MS.gene057778:CDS	45.0%
	CTTCTGTGCAAGGAATGGTA+AGG	-	chr4.4:36545169-36545188	None:intergenic	45.0%
	GGATATGATCATCCTATGGG+TGG	+	chr4.4:36545143-36545162	MS.gene057778:CDS	45.0%
	GTTTCCCTGGTATCATCAGA+AGG	+	chr4.4:36544958-36544977	MS.gene057778:CDS	45.0%
	GATGCCCTTCTGATGATACC+AGG	-	chr4.4:36544966-36544985	None:intergenic	50.0%
!!	AGACTTGCTGAGTCAAGCTG+AGG	+	chr4.4:36545112-36545131	MS.gene057778:CDS	50.0%
	GGAATGGTAAGGCCACCCAT+AGG	-	chr4.4:36545158-36545177	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	36544948	36545229	36544948	ID=MS.gene057778
chr4.4	mRNA	36544948	36545229	36544948	ID=MS.gene057778.t1;Parent=MS.gene057778
chr4.4	exon	36544948	36545229	36544948	ID=MS.gene057778.t1.exon1;Parent=MS.gene057778.t1
chr4.4	CDS	36544948	36545229	36544948	ID=cds.MS.gene057778.t1;Parent=MS.gene057778.t1

Gene Sequence	>MS.gene057778 ATGGGTTTTCGTTTCCCTGGTATCATCAGAAGGGCATCTTTTTCTGGAAACCGATCAGCTTCAAAAGCTGTTGATGTGCCAAAGGGATATCTTGCAGTATATGTTGGAGAGAAACAGACGCGGTATGTGATCCCTGTATCATACTTGAACCAACCTTCATTTCAAGACTTGCTGAGTCAAGCTGAGGAAGAGTTCGGATATGATCATCCTATGGGTGGCCTTACCATTCCTTGCACAGAAGATATCTTTCAACTTATAACATCTCGCATGAACGGGCTATGA
Protein sequence	>MS.gene057778.t1 MGFRFPGIIRRASFSGNRSASKAVDVPKGYLAVYVGEKQTRYVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCTEDIFQLITSRMNGL